From 2e4c6565ea371ff84d19c1ab9e246d070a4206b6 Mon Sep 17 00:00:00 2001 From: "Mark A. Miller" Date: Mon, 12 Jun 2023 17:01:00 -0400 Subject: [PATCH] regen for v7.6.5 --- poetry.lock | 737 +- project.Makefile | 28 +- project/json/nmdc_submission_schema.json | 8212 +++++++++-------- .../nmdc_submission_schema.schema.json | 143 +- project/owl/nmdc_submission_schema.owl.ttl | 3228 +++---- .../tsv_in/import_slots_regardless.tsv | 1100 +-- .../datamodel/nmdc_submission_schema.py | 4374 +++++---- .../schema/nmdc_submission_schema.yaml | 5057 +++++----- 8 files changed, 11762 insertions(+), 11117 deletions(-) diff --git a/poetry.lock b/poetry.lock index 84d19f51..b8e17fa5 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. +# This file is automatically @generated by Poetry and should not be changed by hand. 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name = "sssom" -version = "0.3.30" +version = "0.3.31" description = "Operations on SSSOM mapping tables" category = "dev" optional = false python-versions = ">=3.7" files = [ - {file = "sssom-0.3.30.tar.gz", hash = "sha256:6cf7b8bcdeb130df2e16cd3d758b11adc596b7a0d198bf3b27809a5aba1c2454"}, + {file = "sssom-0.3.31.tar.gz", hash = "sha256:6065e20f675b94af7625b020fbd90be9de447157a59c9da693a3fa7c1639e6b0"}, ] [package.dependencies] @@ -3742,14 +3743,14 @@ test = ["pytest"] [[package]] name = "sssom-schema" -version = "0.11.0" +version = "0.12.0" description = "SSSOM is a Simple Standard for Sharing Ontology Mappings." category = "dev" optional = false python-versions = ">=3.7.6,<4.0.0" files = [ - {file = "sssom_schema-0.11.0-py3-none-any.whl", hash = "sha256:eca4ea0f1481330b79fd614faa4999ca7662cfdc60614c5abd6857558770969a"}, - {file = "sssom_schema-0.11.0.tar.gz", hash = "sha256:de43a243aa2d5fe079a87cef110767acd0150ba094479c1cfdbcb9a7d25f8a9f"}, + {file = 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smaller template -schemasheets/populated_tsv/slot_usage_minimal.tsv: src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml \ -schemasheets/templates/slot_usage_minimal.tsv - $(RUN) linkml2sheets \ - --output-directory $(dir $@) \ - --schema $< $(word 2,$^) -# WARNING:root:Not implemented: slot +# see local/usage_template.tsv +## target was was local/slot_usage.tsv, +## but I changed the destination to a checked-in directory +## so collaborators can sort and filter the slot attributes +## and I switched to a smaller template +#schemasheets/populated_tsv/slot_usage_minimal.tsv: src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml \ +#schemasheets/templates/slot_usage_minimal.tsv +# $(RUN) linkml2sheets \ +# --output-directory $(dir $@) \ +# --schema $< $(word 2,$^) +## WARNING:root:Not implemented: slot local/SampleData-water-data-exhaustive.tsv: src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml \ src/data/valid/SampleData-water-data-exhaustive.yaml @@ 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"http://www.ebi.ac.uk/efo/" }, "ISA": { "prefix_prefix": "ISA", - "prefix_reference": "https://unknown.to.linter.org/" + "prefix_reference": "http://example.com/isa/" }, - "NCIT": { - "prefix_prefix": "NCIT", - "prefix_reference": "http://purl.obolibrary.org/obo/NCIT_" + "MetaNetX": { + "prefix_prefix": "MetaNetX", + "prefix_reference": "http://example.com/metanetx/" }, - "OBI": { - "prefix_prefix": "OBI", - "prefix_reference": "http://purl.obolibrary.org/obo/OBI_" + "RetroRules": { + "prefix_prefix": "RetroRules", + "prefix_reference": "http://example.com/retrorules/" + }, + "emsl.project": { + "prefix_prefix": "emsl.project", + "prefix_reference": "https://bioregistry.io/emsl.project:" + }, + "generic": { + "prefix_prefix": "generic", + "prefix_reference": "https://example.com/generic/" + }, + "gnps.task": { + "prefix_prefix": "gnps.task", + "prefix_reference": "https://bioregistry.io/gnps.task:" + }, + "gtpo": { + "prefix_prefix": "gtpo", + "prefix_reference": "http://example.com/gtpo/" + }, + "igsn": { + "prefix_prefix": "igsn", + "prefix_reference": "https://app.geosamples.org/sample/igsn/" + }, + "jgi.proposal": { + "prefix_prefix": "jgi.proposal", + "prefix_reference": "https://bioregistry.io/jgi.proposal:" + }, + "jgi": { + "prefix_prefix": "jgi", + "prefix_reference": "http://example.com/jgi/" + }, + "mgnify.proj": { + "prefix_prefix": "mgnify.proj", + "prefix_reference": "https://identifiers.org/mgnify.proj:" + }, + "neon.identifier": { + "prefix_prefix": "neon.identifier", + "prefix_reference": "http://example.org/neon/identifier/" }, - "bare": { - "prefix_prefix": "bare", - "prefix_reference": "https://unknown.to.linter.org/" + "neon.schema": { + "prefix_prefix": "neon.schema", + "prefix_reference": "http://example.org/neon/schema/" }, "nmdc": { "prefix_prefix": "nmdc", "prefix_reference": "https://w3id.org/nmdc/" }, - "nmdc_yaml": { - "prefix_prefix": "nmdc_yaml", - "prefix_reference": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/" + "skos": { + "prefix_prefix": "skos", + "prefix_reference": "http://www.w3.org/2004/02/skos/core#" }, "prov": { "prefix_prefix": "prov", @@ -72,26 +108,14 @@ "prefix_prefix": "rdfs", "prefix_reference": "http://www.w3.org/2000/01/rdf-schema#" }, - "skos": { - "prefix_prefix": "skos", - "prefix_reference": "http://www.w3.org/2004/02/skos/core#" - }, - "NCBITaxon": { - "prefix_prefix": "NCBITaxon", - "prefix_reference": "http://purl.obolibrary.org/obo/NCBITaxon_" - }, - "jgi": { - "prefix_prefix": "jgi", - "prefix_reference": "https://unknown.to.linter.org/" + "KEGG.COMPOUND": { + "prefix_prefix": "KEGG.COMPOUND", + "prefix_reference": "http://identifiers.org/kegg.compound/" }, "dcterms": { "prefix_prefix": "dcterms", "prefix_reference": "http://purl.org/dc/terms/" }, - "KEGG.COMPOUND": { - "prefix_prefix": "KEGG.COMPOUND", - "prefix_reference": "http://identifiers.org/kegg.compound/" - }, "UniProtKB": { "prefix_prefix": "UniProtKB", "prefix_reference": "https://identifiers.org/uniprot/" @@ -100,10 +124,6 @@ "prefix_prefix": "biolink", "prefix_reference": "https://w3id.org/biolink/vocab/" }, - "gtpo": { - "prefix_prefix": "gtpo", - "prefix_reference": "https://unknown.to.linter.org/" - }, "sio": { "prefix_prefix": "sio", "prefix_reference": "http://semanticscience.org/resource/SIO_" @@ -124,6 +144,10 @@ "prefix_prefix": "CHMO", "prefix_reference": "http://purl.obolibrary.org/obo/CHMO_" }, + "OBI": { + "prefix_prefix": "OBI", + "prefix_reference": "http://purl.obolibrary.org/obo/OBI_" + }, "MIXS": { "prefix_prefix": "MIXS", "prefix_reference": "https://w3id.org/mixs/" @@ -134,11 +158,11 @@ }, "COG": { "prefix_prefix": "COG", - "prefix_reference": "https://unknown.to.linter.org/" + "prefix_reference": "https://bioregistry.io/cog:" }, "EC": { "prefix_prefix": "EC", - "prefix_reference": "https://unknown.to.linter.org/" + "prefix_reference": "https://bioregistry.io/eccode:" }, "GO": { "prefix_prefix": "GO", @@ -160,18 +184,10 @@ "prefix_prefix": "MetaCyc", "prefix_reference": "https://identifiers.org/metacyc.reaction/" }, - "MetaNetX": { - "prefix_prefix": "MetaNetX", - "prefix_reference": "https://unknown.to.linter.org/" - }, "RHEA": { "prefix_prefix": "RHEA", "prefix_reference": "http://identifiers.org/rhea/" }, - "RetroRules": { - "prefix_prefix": "RetroRules", - "prefix_reference": "https://unknown.to.linter.org/" - }, "SEED": { "prefix_prefix": "SEED", "prefix_reference": "http://identifiers.org/seed/" @@ -2049,42 +2065,6 @@ } } }, - "window_mat_enum": { - "name": "window_mat_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "clad": { - "text": "clad" - }, - "fiberglass": { - "text": "fiberglass" - }, - "metal": { - "text": "metal" - }, - "vinyl": { - "text": "vinyl" - }, - "wood": { - "text": "wood" - } - } - }, - "substructure_type_enum": { - "name": "substructure_type_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "crawlspace": { - "text": "crawlspace" - }, - "slab on grade": { - "text": "slab on grade" - }, - "basement": { - "text": "basement" - } - } - }, "filter_type_enum": { "name": "filter_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -2109,93 +2089,63 @@ } } }, - "weekday_enum": { - "name": "weekday_enum", + "window_cond_enum": { + "name": "window_cond_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "Monday": { - "text": "Monday" - }, - "Tuesday": { - "text": "Tuesday" - }, - "Wednesday": { - "text": "Wednesday" + "damaged": { + "text": "damaged" }, - "Thursday": { - "text": "Thursday" + "needs repair": { + "text": "needs repair" }, - "Friday": { - "text": "Friday" + "new": { + "text": "new" }, - "Saturday": { - "text": "Saturday" + "rupture": { + "text": "rupture" }, - "Sunday": { - "text": "Sunday" + "visible wear": { + "text": "visible wear" } } }, - "train_line_enum": { - "name": "train_line_enum", + "wall_finish_mat_enum": { + "name": "wall_finish_mat_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "red": { - "text": "red" + "plaster": { + "text": "plaster" }, - "green": { - "text": "green" + "gypsum plaster": { + "text": "gypsum plaster" }, - "orange": { - "text": "orange" - } - } - }, - "door_direct_enum": { - "name": "door_direct_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "inward": { - "text": "inward" + "veneer plaster": { + "text": "veneer plaster" }, - "outward": { - "text": "outward" + "gypsum board": { + "text": "gypsum board" }, - "sideways": { - "text": "sideways" - } - } - }, - "furniture_enum": { - "name": "furniture_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "cabinet": { - "text": "cabinet" + "tile": { + "text": "tile" }, - "chair": { - "text": "chair" + "terrazzo": { + "text": "terrazzo" }, - "desks": { - "text": "desks" - } - } - }, - "occup_document_enum": { - "name": "occup_document_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "automated count": { - "text": "automated count" + "stone facing": { + "text": "stone facing" }, - "estimate": { - "text": "estimate" + "acoustical treatment": { + "text": "acoustical treatment" }, - "manual count": { - "text": "manual count" + "wood": { + "text": "wood" }, - "videos": { - "text": "videos" + "metal": { + "text": "metal" + }, + "masonry": { + "text": "masonry" } } }, @@ -2214,84 +2164,6 @@ } } }, - "window_cover_enum": { - "name": "window_cover_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "blinds": { - "text": "blinds" - }, - "curtains": { - "text": "curtains" - }, - "none": { - "text": "none" - } - } - }, - "shading_device_cond_enum": { - "name": "shading_device_cond_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "damaged": { - "text": "damaged" - }, - "needs repair": { - "text": "needs repair" - }, - "new": { - "text": "new" - }, - "rupture": { - "text": "rupture" - }, - "visible wear": { - "text": "visible wear" - } - } - }, - "int_wall_cond_enum": { - "name": "int_wall_cond_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "new": { - "text": "new" - }, - "visible wear": { - "text": "visible wear" - }, - "needs repair": { - "text": "needs repair" - }, - "damaged": { - "text": "damaged" - }, - "rupture": { - "text": "rupture" - } - } - }, - "light_type_enum": { - "name": "light_type_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "natural light": { - "text": "natural light" - }, - "electric light": { - "text": "electric light" - }, - "desk lamp": { - "text": "desk lamp" - }, - "flourescent lights": { - "text": "flourescent lights" - }, - "none": { - "text": "none" - } - } - }, "ext_window_orient_enum": { "name": "ext_window_orient_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -2322,116 +2194,83 @@ } } }, - "arch_struc_enum": { - "name": "arch_struc_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "building": { - "text": "building" - }, - "shed": { - "text": "shed" - }, - "home": { - "text": "home" - } - } - }, - "floor_struc_enum": { - "name": "floor_struc_enum", + "samp_weather_enum": { + "name": "samp_weather_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "balcony": { - "text": "balcony" - }, - "floating floor": { - "text": "floating floor" + "clear sky": { + "text": "clear sky" }, - "glass floor": { - "text": "glass floor" + "cloudy": { + "text": "cloudy" }, - "raised floor": { - "text": "raised floor" + "foggy": { + "text": "foggy" }, - "sprung floor": { - "text": "sprung floor" + "hail": { + "text": "hail" }, - "wood-framed": { - "text": "wood-framed" + "rain": { + "text": "rain" }, - "concrete": { - "text": "concrete" - } - } - }, - "handidness_enum": { - "name": "handidness_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "ambidexterity": { - "text": "ambidexterity" + "snow": { + "text": "snow" }, - "left handedness": { - "text": "left handedness" + "sleet": { + "text": "sleet" }, - "mixed-handedness": { - "text": "mixed-handedness" + "sunny": { + "text": "sunny" }, - "right handedness": { - "text": "right handedness" + "windy": { + "text": "windy" } } }, - "wall_surf_treatment_enum": { - "name": "wall_surf_treatment_enum", + "floor_cond_enum": { + "name": "floor_cond_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "painted": { - "text": "painted" - }, - "wall paper": { - "text": "wall paper" + "new": { + "text": "new" }, - "no treatment": { - "text": "no treatment" + "visible wear": { + "text": "visible wear" }, - "paneling": { - "text": "paneling" + "needs repair": { + "text": "needs repair" }, - "stucco": { - "text": "stucco" + "damaged": { + "text": "damaged" }, - "fabric": { - "text": "fabric" + "rupture": { + "text": "rupture" } } }, - "specific_enum": { - "name": "specific_enum", + "window_mat_enum": { + "name": "window_mat_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "operation": { - "text": "operation" - }, - "as built": { - "text": "as built" + "clad": { + "text": "clad" }, - "construction": { - "text": "construction" + "fiberglass": { + "text": "fiberglass" }, - "bid": { - "text": "bid" + "metal": { + "text": "metal" }, - "design": { - "text": "design" + "vinyl": { + "text": "vinyl" }, - "photos": { - "text": "photos" + "wood": { + "text": "wood" } } }, - "window_loc_enum": { - "name": "window_loc_enum", + "ext_wall_orient_enum": { + "name": "ext_wall_orient_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { "north": { @@ -2445,239 +2284,140 @@ }, "west": { "text": "west" - } - } - }, - "building_setting_enum": { - "name": "building_setting_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "urban": { - "text": "urban" - }, - "suburban": { - "text": "suburban" - }, - "exurban": { - "text": "exurban" }, - "rural": { - "text": "rural" - } - } - }, - "samp_floor_enum": { - "name": "samp_floor_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "1st floor": { - "text": "1st floor" + "northeast": { + "text": "northeast" }, - "2nd floor": { - "text": "2nd floor" + "southeast": { + "text": "southeast" }, - "basement": { - "text": "basement" + "southwest": { + "text": "southwest" }, - "lobby": { - "text": "lobby" + "northwest": { + "text": "northwest" } } }, - "vis_media_enum": { - "name": "vis_media_enum", + "floor_water_mold_enum": { + "name": "floor_water_mold_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "photos": { - "text": "photos" - }, - "videos": { - "text": "videos" - }, - "commonly of the building": { - "text": "commonly of the building" - }, - "site context (adjacent buildings, vegetation, terrain, streets)": { - "text": "site context (adjacent buildings, vegetation, terrain, streets)" - }, - "interiors": { - "text": "interiors" - }, - "equipment": { - "text": "equipment" + "mold odor": { + "text": "mold odor" }, - "3D scans": { - "text": "3D scans" - } - } - }, - "indoor_space_enum": { - "name": "indoor_space_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "bedroom": { - "text": "bedroom" + "wet floor": { + "text": "wet floor" }, - "office": { - "text": "office" + "water stains": { + "text": "water stains" }, - "bathroom": { - "text": "bathroom" + "wall discoloration": { + "text": "wall discoloration" }, - "foyer": { - "text": "foyer" + "floor discoloration": { + "text": "floor discoloration" }, - "kitchen": { - "text": "kitchen" + "ceiling discoloration": { + "text": "ceiling discoloration" }, - "locker room": { - "text": "locker room" + "peeling paint or wallpaper": { + "text": "peeling paint or wallpaper" }, - "hallway": { - "text": "hallway" + "bulging walls": { + "text": "bulging walls" }, - "elevator": { - "text": "elevator" + "condensation": { + "text": "condensation" } } }, - "ceil_texture_enum": { - "name": "ceil_texture_enum", + "weekday_enum": { + "name": "weekday_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "crows feet": { - "text": "crows feet" - }, - "crows-foot stomp": { - "text": "crows-foot stomp" - }, - "double skip": { - "text": "double skip" - }, - "hawk and trowel": { - "text": "hawk and trowel" - }, - "knockdown": { - "text": "knockdown" - }, - "popcorn": { - "text": "popcorn" - }, - "orange peel": { - "text": "orange peel" + "Monday": { + "text": "Monday" }, - "rosebud stomp": { - "text": "rosebud stomp" + "Tuesday": { + "text": "Tuesday" }, - "Santa-Fe texture": { - "text": "Santa-Fe texture" + "Wednesday": { + "text": "Wednesday" }, - "skip trowel": { - "text": "skip trowel" + "Thursday": { + "text": "Thursday" }, - "smooth": { - "text": "smooth" + "Friday": { + "text": "Friday" }, - "stomp knockdown": { - "text": "stomp knockdown" + "Saturday": { + "text": "Saturday" }, - "swirl": { - "text": "swirl" + "Sunday": { + "text": "Sunday" } } }, - "door_move_enum": { - "name": "door_move_enum", + "window_cover_enum": { + "name": "window_cover_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "collapsible": { - "text": "collapsible" - }, - "folding": { - "text": "folding" - }, - "revolving": { - "text": "revolving" - }, - "rolling shutter": { - "text": "rolling shutter" + "blinds": { + "text": "blinds" }, - "sliding": { - "text": "sliding" + "curtains": { + "text": "curtains" }, - "swinging": { - "text": "swinging" + "none": { + "text": "none" } } }, - "door_comp_type_enum": { - "name": "door_comp_type_enum", + "light_type_enum": { + "name": "light_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "metal covered": { - "text": "metal covered" + "natural light": { + "text": "natural light" }, - "revolving": { - "text": "revolving" + "electric light": { + "text": "electric light" }, - "sliding": { - "text": "sliding" + "desk lamp": { + "text": "desk lamp" }, - "telescopic": { - "text": "telescopic" + "flourescent lights": { + "text": "flourescent lights" + }, + "none": { + "text": "none" } } }, - "wall_texture_enum": { - "name": "wall_texture_enum", + "heat_cool_type_enum": { + "name": "heat_cool_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "crows feet": { - "text": "crows feet" - }, - "crows-foot stomp": { - "text": "crows-foot stomp" - }, - "": { - "text": "" - }, - "double skip": { - "text": "double skip" - }, - "hawk and trowel": { - "text": "hawk and trowel" - }, - "knockdown": { - "text": "knockdown" - }, - "popcorn": { - "text": "popcorn" - }, - "orange peel": { - "text": "orange peel" - }, - "rosebud stomp": { - "text": "rosebud stomp" - }, - "Santa-Fe texture": { - "text": "Santa-Fe texture" + "radiant system": { + "text": "radiant system" }, - "skip trowel": { - "text": "skip trowel" + "heat pump": { + "text": "heat pump" }, - "smooth": { - "text": "smooth" + "forced air system": { + "text": "forced air system" }, - "stomp knockdown": { - "text": "stomp knockdown" + "steam forced heat": { + "text": "steam forced heat" }, - "swirl": { - "text": "swirl" + "wood stove": { + "text": "wood stove" } } }, - "wall_loc_enum": { - "name": "wall_loc_enum", + "window_loc_enum": { + "name": "window_loc_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { "north": { @@ -2694,39 +2434,6 @@ } } }, - "floor_water_mold_enum": { - "name": "floor_water_mold_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "mold odor": { - "text": "mold odor" - }, - "wet floor": { - "text": "wet floor" - }, - "water stains": { - "text": "water stains" - }, - "wall discoloration": { - "text": "wall discoloration" - }, - "floor discoloration": { - "text": "floor discoloration" - }, - "ceiling discoloration": { - "text": "ceiling discoloration" - }, - "peeling paint or wallpaper": { - "text": "peeling paint or wallpaper" - }, - "bulging walls": { - "text": "bulging walls" - }, - "condensation": { - "text": "condensation" - } - } - }, "door_type_enum": { "name": "door_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -2742,101 +2449,239 @@ } } }, - "window_cond_enum": { - "name": "window_cond_enum", + "wall_loc_enum": { + "name": "wall_loc_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "damaged": { - "text": "damaged" - }, - "needs repair": { - "text": "needs repair" + "north": { + "text": "north" }, - "new": { - "text": "new" + "south": { + "text": "south" }, - "rupture": { - "text": "rupture" + "east": { + "text": "east" }, - "visible wear": { - "text": "visible wear" + "west": { + "text": "west" } } }, - "water_feat_type_enum": { - "name": "water_feat_type_enum", + "shading_device_type_enum": { + "name": "shading_device_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "fountain": { - "text": "fountain" + "bahama shutters": { + "text": "bahama shutters" }, - "pool": { - "text": "pool" + "exterior roll blind": { + "text": "exterior roll blind" }, - "standing feature": { - "text": "standing feature" + "gambrel awning": { + "text": "gambrel awning" }, - "stream": { - "text": "stream" + "hood awning": { + "text": "hood awning" }, - "waterfall": { - "text": "waterfall" - } - } - }, - "floor_cond_enum": { - "name": "floor_cond_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "new": { - "text": "new" + "porchroller awning": { + "text": "porchroller awning" }, - "visible wear": { - "text": "visible wear" + "sarasota shutters": { + "text": "sarasota shutters" }, - "needs repair": { - "text": "needs repair" + "slatted aluminum": { + "text": "slatted aluminum" }, - "damaged": { - "text": "damaged" + "solid aluminum awning": { + "text": "solid aluminum awning" }, - "rupture": { - "text": "rupture" + "sun screen": { + "text": "sun screen" + }, + "tree": { + "text": "tree" + }, + "trellis": { + "text": "trellis" + }, + "venetian awning": { + "text": "venetian awning" } } }, - "indoor_surf_enum": { - "name": "indoor_surf_enum", + "floor_finish_mat_enum": { + "name": "floor_finish_mat_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "cabinet": { - "text": "cabinet" + "tile": { + "text": "tile" }, - "ceiling": { - "text": "ceiling" + "wood strip or parquet": { + "text": "wood strip or parquet" }, - "counter top": { - "text": "counter top" + "carpet": { + "text": "carpet" }, - "door": { - "text": "door" + "rug": { + "text": "rug" }, - "shelving": { - "text": "shelving" + "laminate wood": { + "text": "laminate wood" }, - "vent cover": { - "text": "vent cover" + "lineoleum": { + "text": "lineoleum" }, - "window": { - "text": "window" + "vinyl composition tile": { + "text": "vinyl composition tile" }, - "wall": { - "text": "wall" + "sheet vinyl": { + "text": "sheet vinyl" + }, + "stone": { + "text": "stone" + }, + "bamboo": { + "text": "bamboo" + }, + "cork": { + "text": "cork" + }, + "terrazo": { + "text": "terrazo" + }, + "concrete": { + "text": "concrete" + }, + "none": { + "text": "none" + }, + "sealed": { + "text": "sealed" + }, + "clear finish": { + "text": "clear finish" + }, + "paint": { + "text": "paint" + }, + "none or unfinished": { + "text": "none or unfinished" } } }, - "ext_wall_orient_enum": { - "name": "ext_wall_orient_enum", + "substructure_type_enum": { + "name": "substructure_type_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "crawlspace": { + "text": "crawlspace" + }, + "slab on grade": { + "text": "slab on grade" + }, + "basement": { + "text": "basement" + } + } + }, + "rel_samp_loc_enum": { + "name": "rel_samp_loc_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "edge of car": { + "text": "edge of car" + }, + "center of car": { + "text": "center of car" + }, + "under a seat": { + "text": "under a seat" + } + } + }, + "room_type_enum": { + "name": "room_type_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "attic": { + "text": "attic" + }, + "bathroom": { + "text": "bathroom" + }, + "closet": { + "text": "closet" + }, + "conference room": { + "text": "conference room" + }, + "elevator": { + "text": "elevator" + }, + "examining room": { + "text": "examining room" + }, + "hallway": { + "text": "hallway" + }, + "kitchen": { + "text": "kitchen" + }, + "mail room": { + "text": "mail room" + }, + "private office": { + "text": "private office" + }, + "open office": { + "text": "open office" + }, + "stairwell": { + "text": "stairwell" + }, + ",restroom": { + "text": ",restroom" + }, + "lobby": { + "text": "lobby" + }, + "vestibule": { + "text": "vestibule" + }, + "mechanical or electrical room": { + "text": "mechanical or electrical room" + }, + "data center": { + "text": "data center" + }, + "laboratory_wet": { + "text": "laboratory_wet" + }, + "laboratory_dry": { + "text": "laboratory_dry" + }, + "gymnasium": { + "text": "gymnasium" + }, + "natatorium": { + "text": "natatorium" + }, + "auditorium": { + "text": "auditorium" + }, + "lockers": { + "text": "lockers" + }, + "cafe": { + "text": "cafe" + }, + "warehouse": { + "text": "warehouse" + } + } + }, + "heat_deliv_loc_enum": { + "name": "heat_deliv_loc_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { "north": { @@ -2850,117 +2695,240 @@ }, "west": { "text": "west" + } + } + }, + "wall_texture_enum": { + "name": "wall_texture_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "crows feet": { + "text": "crows feet" }, - "northeast": { - "text": "northeast" + "crows-foot stomp": { + "text": "crows-foot stomp" }, - "southeast": { - "text": "southeast" + "": { + "text": "" }, - "southwest": { - "text": "southwest" + "double skip": { + "text": "double skip" }, - "northwest": { - "text": "northwest" + "hawk and trowel": { + "text": "hawk and trowel" + }, + "knockdown": { + "text": "knockdown" + }, + "popcorn": { + "text": "popcorn" + }, + "orange peel": { + "text": "orange peel" + }, + "rosebud stomp": { + "text": "rosebud stomp" + }, + "Santa-Fe texture": { + "text": "Santa-Fe texture" + }, + "skip trowel": { + "text": "skip trowel" + }, + "smooth": { + "text": "smooth" + }, + "stomp knockdown": { + "text": "stomp knockdown" + }, + "swirl": { + "text": "swirl" } } }, - "build_occup_type_enum": { - "name": "build_occup_type_enum", + "train_line_enum": { + "name": "train_line_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "office": { - "text": "office" + "red": { + "text": "red" }, - "market": { - "text": "market" + "green": { + "text": "green" }, - "restaurant": { - "text": "restaurant" + "orange": { + "text": "orange" + } + } + }, + "arch_struc_enum": { + "name": "arch_struc_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "building": { + "text": "building" }, - "residence": { - "text": "residence" + "shed": { + "text": "shed" }, - "school": { - "text": "school" + "home": { + "text": "home" + } + } + }, + "door_cond_enum": { + "name": "door_cond_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "damaged": { + "text": "damaged" }, - "residential": { - "text": "residential" + "needs repair": { + "text": "needs repair" }, - "commercial": { - "text": "commercial" + "new": { + "text": "new" }, - "low rise": { - "text": "low rise" + "rupture": { + "text": "rupture" }, - "high rise": { - "text": "high rise" + "visible wear": { + "text": "visible wear" + } + } + }, + "building_setting_enum": { + "name": "building_setting_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "urban": { + "text": "urban" }, - "wood framed": { - "text": "wood framed" + "suburban": { + "text": "suburban" }, - "health care": { - "text": "health care" + "exurban": { + "text": "exurban" }, - "airport": { - "text": "airport" + "rural": { + "text": "rural" + } + } + }, + "specific_enum": { + "name": "specific_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "operation": { + "text": "operation" }, - "sports complex": { - "text": "sports complex" + "as built": { + "text": "as built" + }, + "construction": { + "text": "construction" + }, + "bid": { + "text": "bid" + }, + "design": { + "text": "design" + }, + "photos": { + "text": "photos" } } }, - "door_mat_enum": { - "name": "door_mat_enum", + "wall_const_type_enum": { + "name": "wall_const_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "aluminum": { - "text": "aluminum" + "frame construction": { + "text": "frame construction" }, - "cellular PVC": { - "text": "cellular PVC" + "joisted masonry": { + "text": "joisted masonry" }, - "engineered plastic": { - "text": "engineered plastic" + "light noncombustible": { + "text": "light noncombustible" }, - "fiberboard": { - "text": "fiberboard" + "masonry noncombustible": { + "text": "masonry noncombustible" }, - "fiberglass": { - "text": "fiberglass" + "modified fire resistive": { + "text": "modified fire resistive" }, - "metal": { - "text": "metal" + "fire resistive": { + "text": "fire resistive" + } + } + }, + "indoor_space_enum": { + "name": "indoor_space_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "bedroom": { + "text": "bedroom" }, - "thermoplastic alloy": { - "text": "thermoplastic alloy" + "office": { + "text": "office" }, - "vinyl": { - "text": "vinyl" + "bathroom": { + "text": "bathroom" }, - "wood": { - "text": "wood" + "foyer": { + "text": "foyer" }, - "wood/plastic composite": { - "text": "wood/plastic composite" + "kitchen": { + "text": "kitchen" + }, + "locker room": { + "text": "locker room" + }, + "hallway": { + "text": "hallway" + }, + "elevator": { + "text": "elevator" } } }, - "door_loc_enum": { - "name": "door_loc_enum", + "gender_restroom_enum": { + "name": "gender_restroom_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "north": { - "text": "north" + "all gender": { + "text": "all gender" }, - "south": { - "text": "south" + "female": { + "text": "female" }, - "east": { - "text": "east" + "gender neurtral": { + "text": "gender neurtral" }, - "west": { - "text": "west" + "male": { + "text": "male" + }, + "male and female": { + "text": "male and female" + }, + "unisex": { + "text": "unisex" + } + } + }, + "window_type_enum": { + "name": "window_type_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "single-hung sash window": { + "text": "single-hung sash window" + }, + "horizontal sash window": { + "text": "horizontal sash window" + }, + "fixed window": { + "text": "fixed window" } } }, @@ -2997,75 +2965,138 @@ } } }, - "surf_air_cont_enum": { - "name": "surf_air_cont_enum", + "door_type_wood_enum": { + "name": "door_type_wood_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "dust": { - "text": "dust" + "bettened and ledged": { + "text": "bettened and ledged" }, - "organic matter": { - "text": "organic matter" + "battened": { + "text": "battened" }, - "particulate matter": { - "text": "particulate matter" + "ledged and braced": { + "text": "ledged and braced" }, - "volatile organic compounds": { - "text": "volatile organic compounds" + "ledged and framed": { + "text": "ledged and framed" }, - "biological contaminants": { - "text": "biological contaminants" + "ledged, braced and frame": { + "text": "ledged, braced and frame" }, - "radon": { - "text": "radon" + "framed and paneled": { + "text": "framed and paneled" }, - "nutrients": { - "text": "nutrients" + "glashed or sash": { + "text": "glashed or sash" }, - "biocides": { - "text": "biocides" + "flush": { + "text": "flush" + }, + "louvered": { + "text": "louvered" + }, + "wire gauged": { + "text": "wire gauged" } } }, - "shading_device_type_enum": { - "name": "shading_device_type_enum", + "water_feat_type_enum": { + "name": "water_feat_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "bahama shutters": { - "text": "bahama shutters" + "fountain": { + "text": "fountain" }, - "exterior roll blind": { - "text": "exterior roll blind" + "pool": { + "text": "pool" }, - "gambrel awning": { - "text": "gambrel awning" + "standing feature": { + "text": "standing feature" }, - "hood awning": { - "text": "hood awning" + "stream": { + "text": "stream" }, - "porchroller awning": { - "text": "porchroller awning" + "waterfall": { + "text": "waterfall" + } + } + }, + "door_type_metal_enum": { + "name": "door_type_metal_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "collapsible": { + "text": "collapsible" }, - "sarasota shutters": { - "text": "sarasota shutters" + "corrugated steel": { + "text": "corrugated steel" }, - "slatted aluminum": { - "text": "slatted aluminum" + "hollow": { + "text": "hollow" }, - "solid aluminum awning": { - "text": "solid aluminum awning" + "rolling shutters": { + "text": "rolling shutters" }, - "sun screen": { - "text": "sun screen" + "steel plate": { + "text": "steel plate" + } + } + }, + "room_connected_enum": { + "name": "room_connected_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "attic": { + "text": "attic" }, - "tree": { - "text": "tree" + "bathroom": { + "text": "bathroom" }, - "trellis": { - "text": "trellis" + "closet": { + "text": "closet" }, - "venetian awning": { - "text": "venetian awning" + "conference room": { + "text": "conference room" + }, + "elevator": { + "text": "elevator" + }, + "examining room": { + "text": "examining room" + }, + "hallway": { + "text": "hallway" + }, + "kitchen": { + "text": "kitchen" + }, + "mail room": { + "text": "mail room" + }, + "office": { + "text": "office" + }, + "stairwell": { + "text": "stairwell" + } + } + }, + "door_loc_enum": { + "name": "door_loc_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "north": { + "text": "north" + }, + "south": { + "text": "south" + }, + "east": { + "text": "east" + }, + "west": { + "text": "west" } } }, @@ -3084,6 +3115,198 @@ } } }, + "window_vert_pos_enum": { + "name": "window_vert_pos_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "bottom": { + "text": "bottom" + }, + "middle": { + "text": "middle" + }, + "top": { + "text": "top" + }, + "low": { + "text": "low" + }, + "high": { + "text": "high" + } + } + }, + "handidness_enum": { + "name": "handidness_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "ambidexterity": { + "text": "ambidexterity" + }, + "left handedness": { + "text": "left handedness" + }, + "mixed-handedness": { + "text": "mixed-handedness" + }, + "right handedness": { + "text": "right handedness" + } + } + }, + "door_mat_enum": { + "name": "door_mat_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "aluminum": { + "text": "aluminum" + }, + "cellular PVC": { + "text": "cellular PVC" + }, + "engineered plastic": { + "text": "engineered plastic" + }, + "fiberboard": { + "text": "fiberboard" + }, + "fiberglass": { + "text": "fiberglass" + }, + "metal": { + "text": "metal" + }, + "thermoplastic alloy": { + "text": "thermoplastic alloy" + }, + "vinyl": { + "text": "vinyl" + }, + "wood": { + "text": "wood" + }, + "wood/plastic composite": { + "text": "wood/plastic composite" + } + } + }, + "quad_pos_enum": { + "name": "quad_pos_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "North side": { + "text": "North side" + }, + "West side": { + "text": "West side" + }, + "South side": { + "text": "South side" + }, + "East side": { + "text": "East side" + } + } + }, + "season_use_enum": { + "name": "season_use_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "Spring": { + "text": "Spring" + }, + "Summer": { + "text": "Summer" + }, + "Fall": { + "text": "Fall" + }, + "Winter": { + "text": "Winter" + } + } + }, + "samp_floor_enum": { + "name": "samp_floor_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "1st floor": { + "text": "1st floor" + }, + "2nd floor": { + "text": "2nd floor" + }, + "basement": { + "text": "basement" + }, + "lobby": { + "text": "lobby" + } + } + }, + "door_direct_enum": { + "name": "door_direct_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "inward": { + "text": "inward" + }, + "outward": { + "text": "outward" + }, + "sideways": { + "text": "sideways" + } + } + }, + "surf_air_cont_enum": { + "name": "surf_air_cont_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "dust": { + "text": "dust" + }, + "organic matter": { + "text": "organic matter" + }, + "particulate matter": { + "text": "particulate matter" + }, + "volatile organic compounds": { + "text": "volatile organic compounds" + }, + "biological contaminants": { + "text": "biological contaminants" + }, + "radon": { + "text": "radon" + }, + "nutrients": { + "text": "nutrients" + }, + "biocides": { + "text": "biocides" + } + } + }, + "occup_document_enum": { + "name": "occup_document_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "automated count": { + "text": "automated count" + }, + "estimate": { + "text": "estimate" + }, + "manual count": { + "text": "manual count" + }, + "videos": { + "text": "videos" + } + } + }, "room_condt_enum": { "name": "room_condt_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -3108,54 +3331,45 @@ } } }, - "surf_material_enum": { - "name": "surf_material_enum", + "ceil_cond_enum": { + "name": "ceil_cond_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "adobe": { - "text": "adobe" - }, - "carpet": { - "text": "carpet" - }, - "cinder blocks": { - "text": "cinder blocks" - }, - "concrete": { - "text": "concrete" - }, - "hay bales": { - "text": "hay bales" - }, - "glass": { - "text": "glass" - }, - "metal": { - "text": "metal" + "new": { + "text": "new" }, - "paint": { - "text": "paint" + "visible wear": { + "text": "visible wear" }, - "plastic": { - "text": "plastic" + "needs repair": { + "text": "needs repair" }, - "stainless steel": { - "text": "stainless steel" + "damaged": { + "text": "damaged" }, - "stone": { - "text": "stone" + "rupture": { + "text": "rupture" + } + } + }, + "shading_device_cond_enum": { + "name": "shading_device_cond_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "damaged": { + "text": "damaged" }, - "stucco": { - "text": "stucco" + "needs repair": { + "text": "needs repair" }, - "tile": { - "text": "tile" + "new": { + "text": "new" }, - "vinyl": { - "text": "vinyl" + "rupture": { + "text": "rupture" }, - "wood": { - "text": "wood" + "visible wear": { + "text": "visible wear" } } }, @@ -3195,444 +3409,408 @@ } } }, - "door_type_wood_enum": { - "name": "door_type_wood_enum", + "wall_surf_treatment_enum": { + "name": "wall_surf_treatment_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "bettened and ledged": { - "text": "bettened and ledged" - }, - "battened": { - "text": "battened" - }, - "ledged and braced": { - "text": "ledged and braced" - }, - "ledged and framed": { - "text": "ledged and framed" - }, - "ledged, braced and frame": { - "text": "ledged, braced and frame" + "painted": { + "text": "painted" }, - "framed and paneled": { - "text": "framed and paneled" + "wall paper": { + "text": "wall paper" }, - "glashed or sash": { - "text": "glashed or sash" + "no treatment": { + "text": "no treatment" }, - "flush": { - "text": "flush" + "paneling": { + "text": "paneling" }, - "louvered": { - "text": "louvered" + "stucco": { + "text": "stucco" }, - "wire gauged": { - "text": "wire gauged" + "fabric": { + "text": "fabric" } } }, - "heat_deliv_loc_enum": { - "name": "heat_deliv_loc_enum", + "furniture_enum": { + "name": "furniture_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "north": { - "text": "north" - }, - "south": { - "text": "south" + "cabinet": { + "text": "cabinet" }, - "east": { - "text": "east" + "chair": { + "text": "chair" }, - "west": { - "text": "west" + "desks": { + "text": "desks" } } }, - "train_stat_loc_enum": { - "name": "train_stat_loc_enum", + "ceil_texture_enum": { + "name": "ceil_texture_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "south station above ground": { - "text": "south station above ground" + "crows feet": { + "text": "crows feet" }, - "south station underground": { - "text": "south station underground" + "crows-foot stomp": { + "text": "crows-foot stomp" }, - "south station amtrak": { - "text": "south station amtrak" + "double skip": { + "text": "double skip" }, - "forest hills": { - "text": "forest hills" + "hawk and trowel": { + "text": "hawk and trowel" }, - "riverside": { - "text": "riverside" - } - } - }, - "floor_finish_mat_enum": { - "name": "floor_finish_mat_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "tile": { - "text": "tile" + "knockdown": { + "text": "knockdown" }, - "wood strip or parquet": { - "text": "wood strip or parquet" + "popcorn": { + "text": "popcorn" }, - "carpet": { - "text": "carpet" + "orange peel": { + "text": "orange peel" }, - "rug": { - "text": "rug" + "rosebud stomp": { + "text": "rosebud stomp" }, - "laminate wood": { - "text": "laminate wood" + "Santa-Fe texture": { + "text": "Santa-Fe texture" }, - "lineoleum": { - "text": "lineoleum" + "skip trowel": { + "text": "skip trowel" }, - "vinyl composition tile": { - "text": "vinyl composition tile" + "smooth": { + "text": "smooth" }, - "sheet vinyl": { - "text": "sheet vinyl" + "stomp knockdown": { + "text": "stomp knockdown" }, - "stone": { - "text": "stone" + "swirl": { + "text": "swirl" + } + } + }, + "floor_struc_enum": { + "name": "floor_struc_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "balcony": { + "text": "balcony" }, - "bamboo": { - "text": "bamboo" + "floating floor": { + "text": "floating floor" }, - "cork": { - "text": "cork" + "glass floor": { + "text": "glass floor" + }, + "raised floor": { + "text": "raised floor" }, - "terrazo": { - "text": "terrazo" + "sprung floor": { + "text": "sprung floor" + }, + "wood-framed": { + "text": "wood-framed" }, "concrete": { "text": "concrete" + } + } + }, + "indoor_surf_enum": { + "name": "indoor_surf_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "cabinet": { + "text": "cabinet" }, - "none": { - "text": "none" + "ceiling": { + "text": "ceiling" }, - "sealed": { - "text": "sealed" + "counter top": { + "text": "counter top" }, - "clear finish": { - "text": "clear finish" + "door": { + "text": "door" }, - "paint": { - "text": "paint" + "shelving": { + "text": "shelving" }, - "none or unfinished": { - "text": "none or unfinished" + "vent cover": { + "text": "vent cover" + }, + "window": { + "text": "window" + }, + "wall": { + "text": "wall" } } }, - "window_type_enum": { - "name": "window_type_enum", + "train_stop_loc_enum": { + "name": "train_stop_loc_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "single-hung sash window": { - "text": "single-hung sash window" + "end": { + "text": "end" }, - "horizontal sash window": { - "text": "horizontal sash window" + "mid": { + "text": "mid" }, - "fixed window": { - "text": "fixed window" + "downtown": { + "text": "downtown" } } }, - "drawings_enum": { - "name": "drawings_enum", + "vis_media_enum": { + "name": "vis_media_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "operation": { - "text": "operation" - }, - "as built": { - "text": "as built" + "photos": { + "text": "photos" }, - "construction": { - "text": "construction" + "videos": { + "text": "videos" }, - "bid": { - "text": "bid" + "commonly of the building": { + "text": "commonly of the building" }, - "design": { - "text": "design" + "site context (adjacent buildings, vegetation, terrain, streets)": { + "text": "site context (adjacent buildings, vegetation, terrain, streets)" }, - "building navigation map": { - "text": "building navigation map" + "interiors": { + "text": "interiors" }, - "diagram": { - "text": "diagram" + "equipment": { + "text": "equipment" }, - "sketch": { - "text": "sketch" + "3D scans": { + "text": "3D scans" } } }, - "wall_const_type_enum": { - "name": "wall_const_type_enum", + "door_move_enum": { + "name": "door_move_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "frame construction": { - "text": "frame construction" + "collapsible": { + "text": "collapsible" }, - "joisted masonry": { - "text": "joisted masonry" + "folding": { + "text": "folding" }, - "light noncombustible": { - "text": "light noncombustible" + "revolving": { + "text": "revolving" }, - "masonry noncombustible": { - "text": "masonry noncombustible" + "rolling shutter": { + "text": "rolling shutter" }, - "modified fire resistive": { - "text": "modified fire resistive" + "sliding": { + "text": "sliding" }, - "fire resistive": { - "text": "fire resistive" + "swinging": { + "text": "swinging" } } }, - "wall_finish_mat_enum": { - "name": "wall_finish_mat_enum", + "room_samp_pos_enum": { + "name": "room_samp_pos_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "plaster": { - "text": "plaster" - }, - "gypsum plaster": { - "text": "gypsum plaster" - }, - "veneer plaster": { - "text": "veneer plaster" + "north corner": { + "text": "north corner" }, - "gypsum board": { - "text": "gypsum board" + "south corner": { + "text": "south corner" }, - "tile": { - "text": "tile" + "west corner": { + "text": "west corner" }, - "terrazzo": { - "text": "terrazzo" + "east corner": { + "text": "east corner" }, - "stone facing": { - "text": "stone facing" + "northeast corner": { + "text": "northeast corner" }, - "acoustical treatment": { - "text": "acoustical treatment" + "northwest corner": { + "text": "northwest corner" }, - "wood": { - "text": "wood" + "southeast corner": { + "text": "southeast corner" }, - "metal": { - "text": "metal" + "southwest corner": { + "text": "southwest corner" }, - "masonry": { - "text": "masonry" + "center": { + "text": "center" } } }, - "heat_cool_type_enum": { - "name": "heat_cool_type_enum", + "surf_material_enum": { + "name": "surf_material_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "radiant system": { - "text": "radiant system" - }, - "heat pump": { - "text": "heat pump" - }, - "forced air system": { - "text": "forced air system" + "adobe": { + "text": "adobe" }, - "steam forced heat": { - "text": "steam forced heat" + "carpet": { + "text": "carpet" }, - "wood stove": { - "text": "wood stove" - } - } - }, - "window_vert_pos_enum": { - "name": "window_vert_pos_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "bottom": { - "text": "bottom" + "cinder blocks": { + "text": "cinder blocks" }, - "middle": { - "text": "middle" + "concrete": { + "text": "concrete" }, - "top": { - "text": "top" + "hay bales": { + "text": "hay bales" }, - "low": { - "text": "low" + "glass": { + "text": "glass" }, - "high": { - "text": "high" - } - } - }, - "ceil_cond_enum": { - "name": "ceil_cond_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "new": { - "text": "new" + "metal": { + "text": "metal" }, - "visible wear": { - "text": "visible wear" + "paint": { + "text": "paint" }, - "needs repair": { - "text": "needs repair" + "plastic": { + "text": "plastic" }, - "damaged": { - "text": "damaged" + "stainless steel": { + "text": "stainless steel" }, - "rupture": { - "text": "rupture" - } - } - }, - "door_cond_enum": { - "name": "door_cond_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "damaged": { - "text": "damaged" + "stone": { + "text": "stone" }, - "needs repair": { - "text": "needs repair" + "stucco": { + "text": "stucco" }, - "new": { - "text": "new" + "tile": { + "text": "tile" }, - "rupture": { - "text": "rupture" + "vinyl": { + "text": "vinyl" }, - "visible wear": { - "text": "visible wear" + "wood": { + "text": "wood" } } }, - "rel_samp_loc_enum": { - "name": "rel_samp_loc_enum", + "build_occup_type_enum": { + "name": "build_occup_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "edge of car": { - "text": "edge of car" + "office": { + "text": "office" }, - "center of car": { - "text": "center of car" + "market": { + "text": "market" }, - "under a seat": { - "text": "under a seat" - } - } - }, - "room_connected_enum": { - "name": "room_connected_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "attic": { - "text": "attic" + "restaurant": { + "text": "restaurant" }, - "bathroom": { - "text": "bathroom" + "residence": { + "text": "residence" }, - "closet": { - "text": "closet" + "school": { + "text": "school" }, - "conference room": { - "text": "conference room" + "residential": { + "text": "residential" }, - "elevator": { - "text": "elevator" + "commercial": { + "text": "commercial" }, - "examining room": { - "text": "examining room" + "low rise": { + "text": "low rise" }, - "hallway": { - "text": "hallway" + "high rise": { + "text": "high rise" }, - "kitchen": { - "text": "kitchen" + "wood framed": { + "text": "wood framed" }, - "mail room": { - "text": "mail room" + "health care": { + "text": "health care" }, - "office": { - "text": "office" + "airport": { + "text": "airport" }, - "stairwell": { - "text": "stairwell" + "sports complex": { + "text": "sports complex" } } }, - "train_stop_loc_enum": { - "name": "train_stop_loc_enum", + "door_comp_type_enum": { + "name": "door_comp_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "end": { - "text": "end" + "metal covered": { + "text": "metal covered" }, - "mid": { - "text": "mid" + "revolving": { + "text": "revolving" }, - "downtown": { - "text": "downtown" + "sliding": { + "text": "sliding" + }, + "telescopic": { + "text": "telescopic" } } }, - "quad_pos_enum": { - "name": "quad_pos_enum", + "drawings_enum": { + "name": "drawings_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "North side": { - "text": "North side" + "operation": { + "text": "operation" }, - "West side": { - "text": "West side" + "as built": { + "text": "as built" }, - "South side": { - "text": "South side" + "construction": { + "text": "construction" }, - "East side": { - "text": "East side" + "bid": { + "text": "bid" + }, + "design": { + "text": "design" + }, + "building navigation map": { + "text": "building navigation map" + }, + "diagram": { + "text": "diagram" + }, + "sketch": { + "text": "sketch" } } }, - "ceil_type_enum": { - "name": "ceil_type_enum", + "train_stat_loc_enum": { + "name": "train_stat_loc_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "cathedral": { - "text": "cathedral" - }, - "dropped": { - "text": "dropped" - }, - "concave": { - "text": "concave" + "south station above ground": { + "text": "south station above ground" }, - "barrel-shaped": { - "text": "barrel-shaped" + "south station underground": { + "text": "south station underground" }, - "coffered": { - "text": "coffered" + "south station amtrak": { + "text": "south station amtrak" }, - "cove": { - "text": "cove" + "forest hills": { + "text": "forest hills" }, - "stretched": { - "text": "stretched" + "riverside": { + "text": "riverside" } } }, @@ -3673,221 +3851,113 @@ "submittals": { "text": "submittals" }, - "ventilation system": { - "text": "ventilation system" - }, - "windows": { - "text": "windows" - } - } - }, - "room_type_enum": { - "name": "room_type_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "attic": { - "text": "attic" - }, - "bathroom": { - "text": "bathroom" - }, - "closet": { - "text": "closet" - }, - "conference room": { - "text": "conference room" - }, - "elevator": { - "text": "elevator" - }, - "examining room": { - "text": "examining room" - }, - "hallway": { - "text": "hallway" - }, - "kitchen": { - "text": "kitchen" - }, - "mail room": { - "text": "mail room" - }, - "private office": { - "text": "private office" - }, - "open office": { - "text": "open office" - }, - "stairwell": { - "text": "stairwell" - }, - ",restroom": { - "text": ",restroom" - }, - "lobby": { - "text": "lobby" - }, - "vestibule": { - "text": "vestibule" - }, - "mechanical or electrical room": { - "text": "mechanical or electrical room" - }, - "data center": { - "text": "data center" - }, - "laboratory_wet": { - "text": "laboratory_wet" - }, - "laboratory_dry": { - "text": "laboratory_dry" - }, - "gymnasium": { - "text": "gymnasium" - }, - "natatorium": { - "text": "natatorium" - }, - "auditorium": { - "text": "auditorium" - }, - "lockers": { - "text": "lockers" - }, - "cafe": { - "text": "cafe" - }, - "warehouse": { - "text": "warehouse" - } - } - }, - "season_use_enum": { - "name": "season_use_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "Spring": { - "text": "Spring" - }, - "Summer": { - "text": "Summer" - }, - "Fall": { - "text": "Fall" - }, - "Winter": { - "text": "Winter" + "ventilation system": { + "text": "ventilation system" + }, + "windows": { + "text": "windows" } } }, - "door_type_metal_enum": { - "name": "door_type_metal_enum", + "ceil_type_enum": { + "name": "ceil_type_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "collapsible": { - "text": "collapsible" + "cathedral": { + "text": "cathedral" }, - "corrugated steel": { - "text": "corrugated steel" + "dropped": { + "text": "dropped" }, - "hollow": { - "text": "hollow" + "concave": { + "text": "concave" }, - "rolling shutters": { - "text": "rolling shutters" + "barrel-shaped": { + "text": "barrel-shaped" }, - "steel plate": { - "text": "steel plate" + "coffered": { + "text": "coffered" + }, + "cove": { + "text": "cove" + }, + "stretched": { + "text": "stretched" } } }, - "room_samp_pos_enum": { - "name": "room_samp_pos_enum", + "int_wall_cond_enum": { + "name": "int_wall_cond_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "north corner": { - "text": "north corner" - }, - "south corner": { - "text": "south corner" - }, - "west corner": { - "text": "west corner" - }, - "east corner": { - "text": "east corner" - }, - "northeast corner": { - "text": "northeast corner" + "new": { + "text": "new" }, - "northwest corner": { - "text": "northwest corner" + "visible wear": { + "text": "visible wear" }, - "southeast corner": { - "text": "southeast corner" + "needs repair": { + "text": "needs repair" }, - "southwest corner": { - "text": "southwest corner" + "damaged": { + "text": "damaged" }, - "center": { - "text": "center" + "rupture": { + "text": "rupture" } } }, - "samp_weather_enum": { - "name": "samp_weather_enum", + "depos_env_enum": { + "name": "depos_env_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "clear sky": { - "text": "clear sky" + "Continental - Alluvial": { + "text": "Continental - Alluvial" }, - "cloudy": { - "text": "cloudy" + "Continental - Aeolian": { + "text": "Continental - Aeolian" }, - "foggy": { - "text": "foggy" + "Continental - Fluvial": { + "text": "Continental - Fluvial" }, - "hail": { - "text": "hail" + "Continental - Lacustrine": { + "text": "Continental - Lacustrine" }, - "rain": { - "text": "rain" + "Transitional - Deltaic": { + "text": "Transitional - Deltaic" }, - "snow": { - "text": "snow" + "Transitional - Tidal": { + "text": "Transitional - Tidal" }, - "sleet": { - "text": "sleet" + "Transitional - Lagoonal": { + "text": "Transitional - Lagoonal" }, - "sunny": { - "text": "sunny" + "Transitional - Beach": { + "text": "Transitional - Beach" }, - "windy": { - "text": "windy" - } - } - }, - "gender_restroom_enum": { - "name": "gender_restroom_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "all gender": { - "text": "all gender" + "Transitional - Lake": { + "text": "Transitional - Lake" }, - "female": { - "text": "female" + "Marine - Shallow": { + "text": "Marine - Shallow" }, - "gender neurtral": { - "text": "gender neurtral" + "Marine - Deep": { + "text": "Marine - Deep" }, - "male": { - "text": "male" + "Marine - Reef": { + "text": "Marine - Reef" }, - "male and female": { - "text": "male and female" + "Other - Evaporite": { + "text": "Other - Evaporite" }, - "unisex": { - "text": "unisex" + "Other - Glacial": { + "text": "Other - Glacial" + }, + "Other - Volcanic": { + "text": "Other - Volcanic" + }, + "other": { + "text": "other" } } }, @@ -3915,30 +3985,15 @@ } } }, - "hcr_enum": { - "name": "hcr_enum", + "oxy_stat_samp_enum": { + "name": "oxy_stat_samp_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "Oil Reservoir": { - "text": "Oil Reservoir" - }, - "Gas Reservoir": { - "text": "Gas Reservoir" - }, - "Oil Sand": { - "text": "Oil Sand" - }, - "Coalbed": { - "text": "Coalbed" - }, - "Shale": { - "text": "Shale" - }, - "Tight Oil Reservoir": { - "text": "Tight Oil Reservoir" + "aerobic": { + "text": "aerobic" }, - "Tight Gas Reservoir": { - "text": "Tight Gas Reservoir" + "anaerobic": { + "text": "anaerobic" }, "other": { "text": "other" @@ -3990,102 +4045,6 @@ } } }, - "samp_collect_point_enum": { - "name": "samp_collect_point_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "well": { - "text": "well" - }, - "test well": { - "text": "test well" - }, - "drilling rig": { - "text": "drilling rig" - }, - "wellhead": { - "text": "wellhead" - }, - "separator": { - "text": "separator" - }, - "storage tank": { - "text": "storage tank" - }, - "other": { - "text": "other" - } - } - }, - "oxy_stat_samp_enum": { - "name": "oxy_stat_samp_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "aerobic": { - "text": "aerobic" - }, - "anaerobic": { - "text": "anaerobic" - }, - "other": { - "text": "other" - } - } - }, - "depos_env_enum": { - "name": "depos_env_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "Continental - Alluvial": { - "text": "Continental - Alluvial" - }, - "Continental - Aeolian": { - "text": "Continental - Aeolian" - }, - "Continental - Fluvial": { - "text": "Continental - Fluvial" - }, - "Continental - Lacustrine": { - "text": "Continental - Lacustrine" - }, - "Transitional - Deltaic": { - "text": "Transitional - Deltaic" - }, - "Transitional - Tidal": { - "text": "Transitional - Tidal" - }, - "Transitional - Lagoonal": { - "text": "Transitional - Lagoonal" - }, - "Transitional - Beach": { - "text": "Transitional - Beach" - }, - "Transitional - Lake": { - "text": "Transitional - Lake" - }, - "Marine - Shallow": { - "text": "Marine - Shallow" - }, - "Marine - Deep": { - "text": "Marine - Deep" - }, - "Marine - Reef": { - "text": "Marine - Reef" - }, - "Other - Evaporite": { - "text": "Other - Evaporite" - }, - "Other - Glacial": { - "text": "Other - Glacial" - }, - "Other - Volcanic": { - "text": "Other - Volcanic" - }, - "other": { - "text": "other" - } - } - }, "hcr_geol_age_enum": { "name": "hcr_geol_age_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4146,6 +4105,36 @@ } } }, + "hcr_enum": { + "name": "hcr_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "Oil Reservoir": { + "text": "Oil Reservoir" + }, + "Gas Reservoir": { + "text": "Gas Reservoir" + }, + "Oil Sand": { + "text": "Oil Sand" + }, + "Coalbed": { + "text": "Coalbed" + }, + "Shale": { + "text": "Shale" + }, + "Tight Oil Reservoir": { + "text": "Tight Oil Reservoir" + }, + "Tight Gas Reservoir": { + "text": "Tight Gas Reservoir" + }, + "other": { + "text": "other" + } + } + }, "samp_subtype_enum": { "name": "samp_subtype_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4167,6 +4156,54 @@ } } }, + "samp_collect_point_enum": { + "name": "samp_collect_point_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "well": { + "text": "well" + }, + "test well": { + "text": "test well" + }, + "drilling rig": { + "text": "drilling rig" + }, + "wellhead": { + "text": "wellhead" + }, + "separator": { + "text": "separator" + }, + "storage tank": { + "text": "storage tank" + }, + "other": { + "text": "other" + } + } + }, + "sr_dep_env_enum": { + "name": "sr_dep_env_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "Lacustine": { + "text": "Lacustine" + }, + "Fluvioldeltaic": { + "text": "Fluvioldeltaic" + }, + "Fluviomarine": { + "text": "Fluviomarine" + }, + "Marine": { + "text": "Marine" + }, + "other": { + "text": "other" + } + } + }, "sr_lithology_enum": { "name": "sr_lithology_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4209,27 +4246,6 @@ } } }, - "sr_dep_env_enum": { - "name": "sr_dep_env_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "Lacustine": { - "text": "Lacustine" - }, - "Fluvioldeltaic": { - "text": "Fluvioldeltaic" - }, - "Fluviomarine": { - "text": "Fluviomarine" - }, - "Marine": { - "text": "Marine" - }, - "other": { - "text": "other" - } - } - }, "sr_geol_age_enum": { "name": "sr_geol_age_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4290,6 +4306,27 @@ } } }, + "profile_position_enum": { + "name": "profile_position_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "summit": { + "text": "summit" + }, + "shoulder": { + "text": "shoulder" + }, + "backslope": { + "text": "backslope" + }, + "footslope": { + "text": "footslope" + }, + "toeslope": { + "text": "toeslope" + } + } + }, "biotic_relationship_enum": { "name": "biotic_relationship_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4308,87 +4345,90 @@ } } }, - "fao_class_enum": { - "name": "fao_class_enum", + "soil_horizon_enum": { + "name": "soil_horizon_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "Acrisols": { - "text": "Acrisols" - }, - "Andosols": { - "text": "Andosols" - }, - "Arenosols": { - "text": "Arenosols" - }, - "Cambisols": { - "text": "Cambisols" - }, - "Chernozems": { - "text": "Chernozems" - }, - "Ferralsols": { - "text": "Ferralsols" + "O horizon": { + "text": "O horizon" }, - "Fluvisols": { - "text": "Fluvisols" + "A horizon": { + "text": "A horizon" }, - "Gleysols": { - "text": "Gleysols" + "E horizon": { + "text": "E horizon" }, - "Greyzems": { - "text": "Greyzems" + "B horizon": { + "text": "B horizon" }, - "Gypsisols": { - "text": "Gypsisols" + "C horizon": { + "text": "C horizon" }, - "Histosols": { - "text": "Histosols" + "R layer": { + "text": "R layer" }, - "Kastanozems": { - "text": "Kastanozems" + "Permafrost": { + "text": "Permafrost" }, - "Lithosols": { - "text": "Lithosols" + "M horizon": { + "text": "M horizon" + } + } + }, + "drainage_class_enum": { + "name": "drainage_class_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "very poorly": { + "text": "very poorly" }, - "Luvisols": { - "text": "Luvisols" + "poorly": { + "text": "poorly" }, - "Nitosols": { - "text": "Nitosols" + "somewhat poorly": { + "text": "somewhat poorly" }, - "Phaeozems": { - "text": "Phaeozems" + "moderately well": { + "text": "moderately well" }, - "Planosols": { - "text": "Planosols" + "well": { + "text": "well" }, - "Podzols": { - "text": "Podzols" + "excessively drained": { + "text": "excessively drained" + } + } + }, + "tillage_enum": { + "name": "tillage_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "drill": { + "text": "drill" }, - "Podzoluvisols": { - "text": "Podzoluvisols" + "cutting disc": { + "text": "cutting disc" }, - "Rankers": { - "text": "Rankers" + "ridge till": { + "text": "ridge till" }, - "Regosols": { - "text": "Regosols" + "strip tillage": { + "text": "strip tillage" }, - "Rendzinas": { - "text": "Rendzinas" + "zonal tillage": { + "text": "zonal tillage" }, - "Solonchaks": { - "text": "Solonchaks" + "chisel": { + "text": "chisel" }, - "Solonetz": { - "text": "Solonetz" + "tined": { + "text": "tined" }, - "Vertisols": { - "text": "Vertisols" + "mouldboard": { + "text": "mouldboard" }, - "Yermosols": { - "text": "Yermosols" + "disc plough": { + "text": "disc plough" } } }, @@ -4746,132 +4786,180 @@ } } }, - "soil_horizon_enum": { - "name": "soil_horizon_enum", + "fao_class_enum": { + "name": "fao_class_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "O horizon": { - "text": "O horizon" + "Acrisols": { + "text": "Acrisols" }, - "A horizon": { - "text": "A horizon" + "Andosols": { + "text": "Andosols" }, - "E horizon": { - "text": "E horizon" + "Arenosols": { + "text": "Arenosols" }, - "B horizon": { - "text": "B horizon" + "Cambisols": { + "text": "Cambisols" }, - "C horizon": { - "text": "C horizon" + "Chernozems": { + "text": "Chernozems" }, - "R layer": { - "text": "R layer" + "Ferralsols": { + "text": "Ferralsols" }, - "Permafrost": { - "text": "Permafrost" + "Fluvisols": { + "text": "Fluvisols" }, - "M horizon": { - "text": "M horizon" - } - } - }, - "profile_position_enum": { - "name": "profile_position_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "summit": { - "text": "summit" + "Gleysols": { + "text": "Gleysols" }, - "shoulder": { - "text": "shoulder" + "Greyzems": { + "text": "Greyzems" }, - "backslope": { - "text": "backslope" + "Gypsisols": { + "text": "Gypsisols" }, - "footslope": { - "text": "footslope" + "Histosols": { + "text": "Histosols" }, - "toeslope": { - "text": "toeslope" - } - } - }, - "tillage_enum": { - "name": "tillage_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "drill": { - "text": "drill" + "Kastanozems": { + "text": "Kastanozems" }, - "cutting disc": { - "text": "cutting disc" + "Lithosols": { + "text": "Lithosols" }, - "ridge till": { - "text": "ridge till" + "Luvisols": { + "text": "Luvisols" }, - "strip tillage": { - "text": "strip tillage" + "Nitosols": { + "text": "Nitosols" }, - "zonal tillage": { - "text": "zonal tillage" + "Phaeozems": { + "text": "Phaeozems" }, - "chisel": { - "text": "chisel" + "Planosols": { + "text": "Planosols" }, - "tined": { - "text": "tined" + "Podzols": { + "text": "Podzols" }, - "mouldboard": { - "text": "mouldboard" + "Podzoluvisols": { + "text": "Podzoluvisols" }, - "disc plough": { - "text": "disc plough" - } - } - }, - "drainage_class_enum": { - "name": "drainage_class_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "very poorly": { - "text": "very poorly" + "Rankers": { + "text": "Rankers" }, - "poorly": { - "text": "poorly" + "Regosols": { + "text": "Regosols" }, - "somewhat poorly": { - "text": "somewhat poorly" + "Rendzinas": { + "text": "Rendzinas" }, - "moderately well": { - "text": "moderately well" + "Solonchaks": { + "text": "Solonchaks" }, - "well": { - "text": "well" + "Solonetz": { + "text": "Solonetz" }, - "excessively drained": { - "text": "excessively drained" + "Vertisols": { + "text": "Vertisols" + }, + "Yermosols": { + "text": "Yermosols" } } }, - "samp_capt_status_enum": { - "name": "samp_capt_status_enum", + "plant_sex_enum": { + "name": "plant_sex_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "active surveillance in response to an outbreak": { - "text": "active surveillance in response to an outbreak" + "Androdioecious": { + "text": "Androdioecious" }, - "active surveillance not initiated by an outbreak": { - "text": "active surveillance not initiated by an outbreak" + "Androecious": { + "text": "Androecious" }, - "farm sample": { - "text": "farm sample" + "Androgynous": { + "text": "Androgynous" }, - "market sample": { - "text": "market sample" + "Androgynomonoecious": { + "text": "Androgynomonoecious" }, - "other": { - "text": "other" + "Andromonoecious": { + "text": "Andromonoecious" + }, + "Bisexual": { + "text": "Bisexual" + }, + "Dichogamous": { + "text": "Dichogamous" + }, + "Diclinous": { + "text": "Diclinous" + }, + "Dioecious": { + "text": "Dioecious" + }, + "Gynodioecious": { + "text": "Gynodioecious" + }, + "Gynoecious": { + "text": "Gynoecious" + }, + "Gynomonoecious": { + "text": "Gynomonoecious" + }, + "Hermaphroditic": { + "text": "Hermaphroditic" + }, + "Imperfect": { + "text": "Imperfect" + }, + "Monoclinous": { + "text": "Monoclinous" + }, + "Monoecious": { + "text": "Monoecious" + }, + "Perfect": { + "text": "Perfect" + }, + "Polygamodioecious": { + "text": "Polygamodioecious" + }, + "Polygamomonoecious": { + "text": "Polygamomonoecious" + }, + "Polygamous": { + "text": "Polygamous" + }, + "Protandrous": { + "text": "Protandrous" + }, + "Protogynous": { + "text": "Protogynous" + }, + "Subandroecious": { + "text": "Subandroecious" + }, + "Subdioecious": { + "text": "Subdioecious" + }, + "Subgynoecious": { + "text": "Subgynoecious" + }, + "Synoecious": { + "text": "Synoecious" + }, + "Trimonoecious": { + "text": "Trimonoecious" + }, + "Trioecious": { + "text": "Trioecious" + }, + "Unisexual": { + "text": "Unisexual" } } }, @@ -4899,36 +4987,6 @@ } } }, - "biol_stat_enum": { - "name": "biol_stat_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "wild": { - "text": "wild" - }, - "natural": { - "text": "natural" - }, - "semi-natural": { - "text": "semi-natural" - }, - "inbred line": { - "text": "inbred line" - }, - "breeder's line": { - "text": "breeder's line" - }, - "hybrid": { - "text": "hybrid" - }, - "clonal selection": { - "text": "clonal selection" - }, - "mutant": { - "text": "mutant" - } - } - }, "growth_habit_enum": { "name": "growth_habit_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -4947,96 +5005,72 @@ } } }, - "plant_sex_enum": { - "name": "plant_sex_enum", + "samp_capt_status_enum": { + "name": "samp_capt_status_enum", "from_schema": "https://example.com/nmdc_submission_schema", "permissible_values": { - "Androdioecious": { - "text": "Androdioecious" - }, - "Androecious": { - "text": "Androecious" - }, - "Androgynous": { - "text": "Androgynous" - }, - "Androgynomonoecious": { - "text": "Androgynomonoecious" - }, - "Andromonoecious": { - "text": "Andromonoecious" - }, - "Bisexual": { - "text": "Bisexual" - }, - "Dichogamous": { - "text": "Dichogamous" - }, - "Diclinous": { - "text": "Diclinous" - }, - "Dioecious": { - "text": "Dioecious" - }, - "Gynodioecious": { - "text": "Gynodioecious" - }, - "Gynoecious": { - "text": "Gynoecious" - }, - "Gynomonoecious": { - "text": "Gynomonoecious" - }, - "Hermaphroditic": { - "text": "Hermaphroditic" - }, - "Imperfect": { - "text": "Imperfect" - }, - "Monoclinous": { - "text": "Monoclinous" + "active surveillance in response to an outbreak": { + "text": "active surveillance in response to an outbreak" }, - "Monoecious": { - "text": "Monoecious" + "active surveillance not initiated by an outbreak": { + "text": "active surveillance not initiated by an outbreak" }, - "Perfect": { - "text": "Perfect" + "farm sample": { + "text": "farm sample" }, - "Polygamodioecious": { - "text": "Polygamodioecious" + "market sample": { + "text": "market sample" }, - "Polygamomonoecious": { - "text": "Polygamomonoecious" + "other": { + "text": "other" + } + } + }, + "biol_stat_enum": { + "name": "biol_stat_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "wild": { + "text": "wild" }, - "Polygamous": { - "text": "Polygamous" + "natural": { + "text": "natural" }, - "Protandrous": { - "text": "Protandrous" + "semi-natural": { + "text": "semi-natural" }, - "Protogynous": { - "text": "Protogynous" + "inbred line": { + "text": "inbred line" }, - "Subandroecious": { - "text": "Subandroecious" + "breeder's line": { + "text": "breeder's line" }, - "Subdioecious": { - "text": "Subdioecious" + "hybrid": { + "text": "hybrid" }, - "Subgynoecious": { - "text": "Subgynoecious" + "clonal selection": { + "text": "clonal selection" }, - "Synoecious": { - "text": "Synoecious" + "mutant": { + "text": "mutant" + } + } + }, + "tidal_stage_enum": { + "name": "tidal_stage_enum", + "from_schema": "https://example.com/nmdc_submission_schema", + "permissible_values": { + "low tide": { + "text": "low tide" }, - "Trimonoecious": { - "text": "Trimonoecious" + "ebb tide": { + "text": "ebb tide" }, - "Trioecious": { - "text": "Trioecious" + "flood tide": { + "text": "flood tide" }, - "Unisexual": { - "text": "Unisexual" + "high tide": { + "text": "high tide" } } }, @@ -5058,24 +5092,6 @@ } } }, - "tidal_stage_enum": { - "name": "tidal_stage_enum", - "from_schema": "https://example.com/nmdc_submission_schema", - "permissible_values": { - "low tide": { - "text": "low tide" - }, - "ebb tide": { - "text": "ebb tide" - }, - "flood tide": { - "text": "flood tide" - }, - "high tide": { - "text": "high tide" - } - } - }, "host_sex_enum": { "name": "host_sex_enum", "from_schema": "https://example.com/nmdc_submission_schema", @@ -8612,6 +8628,7 @@ ], "from_schema": "https://example.com/nmdc_submission_schema", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "slot_group": "JGI-Metagenomics", "range": "float", @@ -8631,6 +8648,7 @@ ], "from_schema": "https://example.com/nmdc_submission_schema", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "slot_group": "JGI-Metagenomics", "range": "float", @@ -8648,6 +8666,9 @@ } ], "from_schema": "https://example.com/nmdc_submission_schema", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "slot_group": "JGI-Metagenomics", @@ -8863,7 +8884,7 @@ "name": "dna_volume", "title": "DNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { @@ -8876,7 +8897,7 @@ "slot_group": "JGI-Metagenomics", "range": "float", "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "dnase_rna": { @@ -15274,7 +15295,7 @@ "description": "If sending biological replicates, indicate the rep number here.", "title": "replicate number", "comments": [ - "This will guide staff in ensuring your samples are block & randomized correctly" + "This will guide staff in ensuring your samples are blocked & randomized correctly" ], "from_schema": "https://example.com/nmdc_submission_schema", "rank": 6, @@ -15358,6 +15379,7 @@ ], "from_schema": "https://example.com/nmdc_submission_schema", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "slot_group": "JGI-Metatranscriptomics", "range": "float", @@ -15377,6 +15399,7 @@ ], "from_schema": "https://example.com/nmdc_submission_schema", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "slot_group": "JGI-Metatranscriptomics", "range": "float", @@ -15394,6 +15417,9 @@ } ], "from_schema": "https://example.com/nmdc_submission_schema", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "slot_group": "JGI-Metatranscriptomics", @@ -15591,7 +15617,7 @@ "name": "rna_volume", "title": "RNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { @@ -15604,7 +15630,7 @@ "slot_group": "JGI-Metatranscriptomics", "range": "float", "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "room_air_exch_rate": { @@ -21120,24 +21146,61 @@ "multivalued": false, "range": "string" }, - "gold_path_field": { - "name": "gold_path_field", - "description": "This is a grouping for any of the gold path fields", + "description": { + "name": "description", + "description": "a human-readable description of a thing", "from_schema": "https://example.com/nmdc_submission_schema", - "is_a": "attribute", - "abstract": true, + "slot_uri": "dcterms:description", "multivalued": false, "range": "string" }, - "nucleic acid sequence source field": { - "name": "nucleic acid sequence source field", + "id": { + "name": "id", + "description": "A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI", + "notes": [ + "abstracted pattern: prefix:typecode-authshoulder-blade(.version)?(_seqsuffix)?", + "a minimum length of 3 characters is suggested for typecodes, but 1 or 2 characters will be accepted", + "typecodes must correspond 1:1 to a class in the NMDC schema. this will be checked via per-class id slot usage assertions", + "minting authority shoulders should probably be enumerated and checked in the pattern" + ], + "examples": [ + { + "value": "nmdc:mgmag-00-x012.1_7_c1", + "description": "https://github.com/microbiomedata/nmdc-schema/pull/499#discussion_r1018499248" + } + ], "from_schema": "https://example.com/nmdc_submission_schema", - "abstract": true + "identifier": true, + "range": "uriorcurie", + "required": true }, "alternative_identifiers": { "name": "alternative_identifiers", "description": "A list of alternative identifiers for the entity.", "from_schema": "https://example.com/nmdc_submission_schema", + "multivalued": true, + "range": "uriorcurie", + "pattern": "^[a-zA-Z_][a-zA-Z0-9_]*:[a-zA-Z_][a-zA-Z0-9_]*$" + }, + "investigation field": { + "name": "investigation field", + "description": "field describing aspect of the investigation/study to which the sample belongs", + "from_schema": "https://example.com/nmdc_submission_schema", + "abstract": true + }, + "name": { + "name": "name", + "description": "A human readable label for an entity", + "from_schema": "https://example.com/nmdc_submission_schema", + "multivalued": false, + "range": "string" + }, + "gold_path_field": { + "name": "gold_path_field", + "description": "This is a grouping for any of the gold path fields", + "from_schema": "https://example.com/nmdc_submission_schema", + "is_a": "attribute", + "abstract": true, "multivalued": false, "range": "string" }, @@ -21160,19 +21223,16 @@ "from_schema": "https://example.com/nmdc_submission_schema", "abstract": true }, - "investigation field": { - "name": "investigation field", - "description": "field describing aspect of the investigation/study to which the sample belongs", + "nucleic acid sequence source field": { + "name": "nucleic acid sequence source field", "from_schema": "https://example.com/nmdc_submission_schema", "abstract": true }, - "description": { - "name": "description", - "description": "a human-readable description of a thing", + "core field": { + "name": "core field", + "description": "basic fields", "from_schema": "https://example.com/nmdc_submission_schema", - "slot_uri": "dcterms:description", - "multivalued": false, - "range": "string" + "abstract": true }, "language": { "name": "language", @@ -21180,38 +21240,11 @@ "from_schema": "https://example.com/nmdc_submission_schema", "range": "language code" }, - "name": { - "name": "name", - "description": "A human readable label for an entity", + "biomaterial_purity": { + "name": "biomaterial_purity", "from_schema": "https://example.com/nmdc_submission_schema", "multivalued": false, "range": "string" - }, - "core field": { - "name": "core field", - "description": "basic fields", - "from_schema": "https://example.com/nmdc_submission_schema", - "abstract": true - }, - "id": { - "name": "id", - "description": "A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI", - "notes": [ - "abstracted pattern: prefix:typecode-authshoulder-blade(.version)?(_seqsuffix)?", - "a minimum length of 3 characters is suggested for typecodes, but 1 or 2 characters will be accepted", - "typecodes must correspond 1:1 to a class in the NMDC schema. this will be checked via per-class id slot usage assertions", - "minting authority shoulders should probably be enumerated and checked in the pattern" - ], - "examples": [ - { - "value": "nmdc:mgmag-00-x012.1_7_c1", - "description": "https://github.com/microbiomedata/nmdc-schema/pull/499#discussion_r1018499248" - } - ], - "from_schema": "https://example.com/nmdc_submission_schema", - "identifier": true, - "range": "uriorcurie", - "required": true } }, "classes": { @@ -21298,7 +21331,7 @@ "value": "PM2.5;10 microgram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air particulate matter concentration" ], @@ -21331,7 +21364,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -21376,7 +21409,7 @@ "value": "5 millibar" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "barometric pressure" ], @@ -21416,7 +21449,7 @@ "value": "410 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon dioxide" ], @@ -21457,7 +21490,7 @@ "value": "0.1 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon monoxide" ], @@ -21496,7 +21529,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -21550,7 +21583,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -21604,7 +21637,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -21643,7 +21676,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -21680,7 +21713,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -21717,7 +21750,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -21754,7 +21787,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -21800,13 +21833,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -21832,7 +21866,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -21883,7 +21917,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -21922,7 +21956,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -21961,7 +21995,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -22003,7 +22037,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -22046,7 +22080,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -22057,6 +22091,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -22095,7 +22130,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -22146,7 +22181,7 @@ "value": "25 gram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity" ], @@ -22171,7 +22206,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -22179,6 +22214,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -22221,7 +22257,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -22259,7 +22295,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -22310,7 +22346,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -22341,7 +22377,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -22387,7 +22423,7 @@ "value": "600 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "oxygen" ], @@ -22423,7 +22459,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -22470,7 +22506,7 @@ "value": "lead;0.15 microgram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pollutants" ], @@ -22511,7 +22547,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -22556,7 +22592,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -22602,7 +22638,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -22647,7 +22683,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -22699,7 +22735,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -22746,7 +22782,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -22791,7 +22827,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -22840,7 +22876,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -22883,7 +22919,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -22924,7 +22960,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -22974,7 +23010,7 @@ "value": "1.36 kilowatts per square meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "solar irradiance" ], @@ -23000,7 +23036,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -23047,7 +23083,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -23098,7 +23134,7 @@ "value": "750 cubic meter per minute" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation rate" ], @@ -23134,7 +23170,7 @@ "value": "Operable windows" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation type" ], @@ -23175,7 +23211,7 @@ "value": "formaldehyde;500 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile organic compounds" ], @@ -23212,7 +23248,7 @@ "value": "Northwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wind direction" ], @@ -23252,7 +23288,7 @@ "value": "21 kilometer per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wind speed" ], @@ -23294,7 +23330,7 @@ "value": "PM2.5;10 microgram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air particulate matter concentration" ], @@ -23328,7 +23364,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -23374,7 +23410,7 @@ "value": "5 millibar" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "barometric pressure" ], @@ -23415,7 +23451,7 @@ "value": "410 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon dioxide" ], @@ -23457,7 +23493,7 @@ "value": "0.1 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon monoxide" ], @@ -23497,7 +23533,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -23552,7 +23588,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -23607,7 +23643,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -23647,7 +23683,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -23685,7 +23721,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -23723,7 +23759,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -23761,7 +23797,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -23808,7 +23844,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -23816,6 +23852,7 @@ "alias": "elev", "owner": "AirInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -23841,7 +23878,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -23893,7 +23930,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -23933,7 +23970,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -23973,7 +24010,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -24016,7 +24053,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -24060,7 +24097,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -24072,6 +24109,7 @@ "alias": "geo_loc_name", "owner": "AirInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -24110,7 +24148,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -24162,7 +24200,7 @@ "value": "25 gram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity" ], @@ -24188,7 +24226,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -24197,6 +24235,7 @@ "alias": "lat_lon", "owner": "AirInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -24239,7 +24278,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -24278,7 +24317,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -24330,7 +24369,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -24362,7 +24401,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -24409,7 +24448,7 @@ "value": "600 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "oxygen" ], @@ -24446,7 +24485,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -24494,7 +24533,7 @@ "value": "lead;0.15 microgram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pollutants" ], @@ -24536,7 +24575,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -24582,7 +24621,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -24629,7 +24668,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -24675,7 +24714,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -24728,7 +24767,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -24776,7 +24815,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -24822,7 +24861,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -24872,7 +24911,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -24916,7 +24955,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -24958,7 +24997,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -25009,7 +25048,7 @@ "value": "1.36 kilowatts per square meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "solar irradiance" ], @@ -25036,7 +25075,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -25084,7 +25123,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -25136,7 +25175,7 @@ "value": "750 cubic meter per minute" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation rate" ], @@ -25173,7 +25212,7 @@ "value": "Operable windows" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation type" ], @@ -25215,7 +25254,7 @@ "value": "formaldehyde;500 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile organic compounds" ], @@ -25253,7 +25292,7 @@ "value": "Northwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wind direction" ], @@ -25294,7 +25333,7 @@ "value": "21 kilometer per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wind speed" ], @@ -25321,7 +25360,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -25356,7 +25395,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -25399,7 +25438,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -25536,7 +25575,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -25582,7 +25621,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -25616,7 +25655,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -25661,7 +25700,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -25703,7 +25742,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -25748,7 +25787,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -25790,7 +25829,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -25834,7 +25873,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -25876,7 +25915,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -25919,7 +25958,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -25960,7 +25999,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -26002,7 +26041,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -26054,7 +26093,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -26099,7 +26138,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -26144,7 +26183,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -26198,7 +26237,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -26251,7 +26290,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -26295,7 +26334,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -26340,7 +26379,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -26383,7 +26422,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -26428,7 +26467,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -26472,7 +26511,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -26515,7 +26554,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -26544,7 +26583,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -26581,7 +26620,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -26618,7 +26657,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -26655,7 +26694,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -26701,13 +26740,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -26733,7 +26773,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -26784,7 +26824,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -26823,7 +26863,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -26862,7 +26902,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -26904,7 +26944,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -26947,7 +26987,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -26958,6 +26998,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -27000,7 +27041,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -27038,7 +27079,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -27074,7 +27115,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -27082,6 +27123,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -27124,7 +27166,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -27167,7 +27209,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -27209,7 +27251,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -27251,7 +27293,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -27289,7 +27331,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -27340,7 +27382,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -27383,7 +27425,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -27429,7 +27471,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -27474,7 +27516,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -27517,7 +27559,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -27560,7 +27602,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -27604,7 +27646,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -27648,7 +27690,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -27679,7 +27721,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -27725,7 +27767,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -27763,7 +27805,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -27810,7 +27852,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -27851,7 +27893,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -27893,7 +27935,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -27937,7 +27979,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -27980,7 +28022,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -28025,7 +28067,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -28069,7 +28111,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -28114,7 +28156,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -28159,7 +28201,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -28201,7 +28243,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -28246,7 +28288,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -28292,7 +28334,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -28337,7 +28379,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -28389,7 +28431,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -28436,7 +28478,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -28481,7 +28523,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -28530,7 +28572,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -28573,7 +28615,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -28622,7 +28664,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -28657,7 +28699,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -28707,7 +28749,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -28739,7 +28781,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -28790,7 +28832,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -28835,7 +28877,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -28876,7 +28918,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -28919,7 +28961,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -28944,7 +28986,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -28973,7 +29015,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -29012,7 +29054,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -29075,7 +29117,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -29117,7 +29159,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -29164,7 +29206,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -29199,7 +29241,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -29245,7 +29287,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -29288,7 +29330,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -29334,7 +29376,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -29377,7 +29419,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -29422,7 +29464,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -29465,7 +29507,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -29509,7 +29551,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -29551,7 +29593,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -29594,7 +29636,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -29647,7 +29689,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -29693,7 +29735,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -29739,7 +29781,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -29794,7 +29836,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -29848,7 +29890,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -29893,7 +29935,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -29939,7 +29981,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -29983,7 +30025,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -30029,7 +30071,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -30074,7 +30116,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -30118,7 +30160,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -30148,7 +30190,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -30186,7 +30228,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -30224,7 +30266,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -30262,7 +30304,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -30309,7 +30351,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -30317,6 +30359,7 @@ "alias": "elev", "owner": "BiofilmInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -30342,7 +30385,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -30394,7 +30437,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -30434,7 +30477,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -30474,7 +30517,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -30517,7 +30560,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -30561,7 +30604,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -30573,6 +30616,7 @@ "alias": "geo_loc_name", "owner": "BiofilmInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -30615,7 +30659,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -30654,7 +30698,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -30691,7 +30735,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -30700,6 +30744,7 @@ "alias": "lat_lon", "owner": "BiofilmInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -30742,7 +30787,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -30786,7 +30831,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -30829,7 +30874,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -30872,7 +30917,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -30911,7 +30956,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -30963,7 +31008,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -31007,7 +31052,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -31054,7 +31099,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -31100,7 +31145,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -31144,7 +31189,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -31188,7 +31233,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -31233,7 +31278,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -31278,7 +31323,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -31310,7 +31355,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -31357,7 +31402,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -31396,7 +31441,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -31444,7 +31489,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -31486,7 +31531,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -31529,7 +31574,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -31574,7 +31619,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -31618,7 +31663,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -31664,7 +31709,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -31709,7 +31754,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -31755,7 +31800,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -31801,7 +31846,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -31844,7 +31889,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -31890,7 +31935,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -31937,7 +31982,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -31983,7 +32028,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -32036,7 +32081,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -32084,7 +32129,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -32130,7 +32175,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -32180,7 +32225,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -32224,7 +32269,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -32274,7 +32319,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -32310,7 +32355,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -32361,7 +32406,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -32394,7 +32439,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -32446,7 +32491,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -32492,7 +32537,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -32534,7 +32579,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -32578,7 +32623,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -32604,7 +32649,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -32634,7 +32679,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -32674,7 +32719,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -32738,7 +32783,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -32765,7 +32810,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -32801,7 +32846,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -32845,7 +32890,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -33080,7 +33125,7 @@ "value": "9 gram per gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "absolute air humidity" ], @@ -33116,7 +33161,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "address" ], @@ -33152,7 +33197,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "adjacent rooms" ], @@ -33188,7 +33233,7 @@ "value": "plane" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aerospace structure" ], @@ -33228,7 +33273,7 @@ "value": "20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature" ], @@ -33260,7 +33305,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -33305,7 +33350,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount of light" ], @@ -33341,7 +33386,7 @@ "value": "shed" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "architectural structure" ], @@ -33380,7 +33425,7 @@ "value": "25.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average dew point" ], @@ -33416,7 +33461,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average daily occupancy" ], @@ -33455,7 +33500,7 @@ "value": "12.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average temperature" ], @@ -33491,7 +33536,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bathroom count" ], @@ -33526,7 +33571,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bedroom count" ], @@ -33561,7 +33606,7 @@ "value": "maintenance plans" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "design, construction, and operation documents" ], @@ -33596,7 +33641,7 @@ "value": "market" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "building occupancy type" ], @@ -33631,7 +33676,7 @@ "value": "rural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "building setting" ], @@ -33670,7 +33715,7 @@ "value": "15" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure age" ], @@ -33706,7 +33751,7 @@ "value": "rural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure setting" ], @@ -33742,7 +33787,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure type" ], @@ -33782,7 +33827,7 @@ "value": "410 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon dioxide" ], @@ -33823,7 +33868,7 @@ "value": "25 square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling area" ], @@ -33859,7 +33904,7 @@ "value": "damaged" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling condition" ], @@ -33894,7 +33939,7 @@ "value": "stucco" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling finish material" ], @@ -33929,7 +33974,7 @@ "value": "concrete" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling structure" ], @@ -33965,7 +34010,7 @@ "value": "popcorn" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling texture" ], @@ -34004,7 +34049,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling thermal mass" ], @@ -34040,7 +34085,7 @@ "value": "coffered" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling type" ], @@ -34075,7 +34120,7 @@ "value": "presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling signs of water/mold" ], @@ -34117,7 +34162,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -34166,7 +34211,7 @@ "value": "12345" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "cooling system identifier" ], @@ -34201,7 +34246,7 @@ "value": "2018-05-11:T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "date last rain" ], @@ -34241,7 +34286,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -34294,7 +34339,7 @@ "value": "22 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dew point" ], @@ -34330,7 +34375,7 @@ "value": "revolving" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, composite" ], @@ -34365,7 +34410,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door condition" ], @@ -34400,7 +34445,7 @@ "value": "inward" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door direction of opening" ], @@ -34435,7 +34480,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door location" ], @@ -34470,7 +34515,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door material" ], @@ -34505,7 +34550,7 @@ "value": "swinging" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door movement" ], @@ -34544,7 +34589,7 @@ "value": "2.5 square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door area or size" ], @@ -34580,7 +34625,7 @@ "value": "wooden" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type" ], @@ -34615,7 +34660,7 @@ "value": "hollow" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, metal" ], @@ -34650,7 +34695,7 @@ "value": "battened" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, wood" ], @@ -34685,7 +34730,7 @@ "value": "presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door signs of water/mold" ], @@ -34721,7 +34766,7 @@ "value": "sketch" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "drawings" ], @@ -34746,7 +34791,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -34783,7 +34828,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -34820,7 +34865,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -34857,7 +34902,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -34903,13 +34948,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -34947,7 +34993,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "elevator count" ], @@ -34970,7 +35016,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -35021,7 +35067,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -35060,7 +35106,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -35099,7 +35145,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -35145,7 +35191,7 @@ "value": "4" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "escalator count" ], @@ -35184,7 +35230,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exposed ductwork" ], @@ -35220,7 +35266,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exposed pipes" ], @@ -35252,7 +35298,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -35299,7 +35345,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exterior door count" ], @@ -35334,7 +35380,7 @@ "value": "northwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "orientations of exterior wall" ], @@ -35369,7 +35415,7 @@ "value": "southwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "orientations of exterior window" ], @@ -35404,7 +35450,7 @@ "value": "HEPA" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "filter type" ], @@ -35439,7 +35485,7 @@ "value": "wood burning" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fireplace type" ], @@ -35479,7 +35525,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor age" ], @@ -35519,7 +35565,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor area" ], @@ -35555,7 +35601,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor condition" ], @@ -35590,7 +35636,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor count" ], @@ -35625,7 +35671,7 @@ "value": "carpet" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor finish material" ], @@ -35660,7 +35706,7 @@ "value": "concrete" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor structure" ], @@ -35699,7 +35745,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor thermal mass" ], @@ -35735,7 +35781,7 @@ "value": "ceiling discoloration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor signs of water/mold" ], @@ -35770,7 +35816,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "frequency of cleaning" ], @@ -35806,7 +35852,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "frequency of cooking" ], @@ -35842,7 +35888,7 @@ "value": "chair" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "furniture" ], @@ -35877,7 +35923,7 @@ "value": "male" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gender of restroom" ], @@ -35908,7 +35954,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -35919,6 +35965,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -35957,7 +36004,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hallway/corridor count" ], @@ -35992,7 +36039,7 @@ "value": "right handedness" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "handidness" ], @@ -36027,7 +36074,7 @@ "value": "heat pump" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating and cooling system type" ], @@ -36062,7 +36109,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating delivery locations" ], @@ -36097,7 +36144,7 @@ "value": "radiant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating system delivery method" ], @@ -36133,7 +36180,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating system identifier" ], @@ -36172,7 +36219,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "height carpet fiber mat" ], @@ -36208,7 +36255,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -36255,7 +36302,7 @@ "value": "foyer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "indoor space" ], @@ -36290,7 +36337,7 @@ "value": "wall" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "indoor surface" ], @@ -36329,7 +36376,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "inside lux light" ], @@ -36365,7 +36412,7 @@ "value": "damaged" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "interior wall condition" ], @@ -36400,7 +36447,7 @@ "value": "2018-05-11:T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "last time swept/mopped/vacuumed" ], @@ -36424,7 +36471,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -36432,6 +36479,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -36470,7 +36518,7 @@ "value": "desk lamp" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light type" ], @@ -36505,7 +36553,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "maximum occupancy" ], @@ -36541,7 +36589,7 @@ "value": "elevator" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mechanical structure" ], @@ -36576,7 +36624,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of pets" ], @@ -36612,7 +36660,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of houseplants" ], @@ -36648,7 +36696,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of residents" ], @@ -36684,7 +36732,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupant density at sampling" ], @@ -36720,7 +36768,7 @@ "value": "estimate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupancy documentation" ], @@ -36755,7 +36803,7 @@ "value": "10" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupancy at sampling" ], @@ -36795,7 +36843,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -36841,7 +36889,7 @@ "value": "cat;5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "presence of pets, animals, or insects" ], @@ -36877,7 +36925,7 @@ "value": "West side" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "quadrant position" ], @@ -36916,7 +36964,7 @@ "value": "80%" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "relative air humidity" ], @@ -36956,7 +37004,7 @@ "value": "12 per kilogram of air" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "outside relative humidity" ], @@ -36992,7 +37040,7 @@ "value": "center of car" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "relative sampling location" ], @@ -37031,7 +37079,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room air exchange rate" ], @@ -37067,7 +37115,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room architectural elements" ], @@ -37103,7 +37151,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room condition" ], @@ -37138,7 +37186,7 @@ "value": "office" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms connected by a doorway" ], @@ -37173,7 +37221,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room count" ], @@ -37212,7 +37260,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room dimensions" ], @@ -37252,7 +37300,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room door distance" ], @@ -37288,7 +37336,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that share a door with sampling room" ], @@ -37324,7 +37372,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that are on the same hallway" ], @@ -37360,7 +37408,7 @@ "value": "interior room" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room location in building" ], @@ -37395,7 +37443,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room moisture damage or mold history" ], @@ -37434,7 +37482,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room net area" ], @@ -37470,7 +37518,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room occupancy" ], @@ -37506,7 +37554,7 @@ "value": "south corner" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room sampling position" ], @@ -37541,7 +37589,7 @@ "value": "bathroom" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room type" ], @@ -37580,7 +37628,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room volume" ], @@ -37616,7 +37664,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that share a wall with sampling room" ], @@ -37652,7 +37700,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room window count" ], @@ -37687,7 +37735,7 @@ "value": "4th floor" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling floor" ], @@ -37722,7 +37770,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling room ID or name" ], @@ -37757,7 +37805,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample size sorting method" ], @@ -37797,7 +37845,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling time outside" ], @@ -37832,7 +37880,7 @@ "value": "foggy" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling day weather" ], @@ -37863,7 +37911,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -37908,7 +37956,7 @@ "value": "autumn [NCIT:C94733]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "season" ], @@ -37945,7 +37993,7 @@ "value": "Winter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "seasonal use" ], @@ -37980,7 +38028,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device signs of water/mold" ], @@ -38016,7 +38064,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device condition" ], @@ -38051,7 +38099,7 @@ "value": "exterior" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device location" ], @@ -38087,7 +38135,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device material" ], @@ -38123,7 +38171,7 @@ "value": "slatted aluminum awning" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device type" ], @@ -38154,7 +38202,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -38200,7 +38248,7 @@ "value": "typically occupied" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "space typical state" ], @@ -38236,7 +38284,7 @@ "value": "construction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "specifications" ], @@ -38261,7 +38309,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -38312,7 +38360,7 @@ "value": "15 per kilogram of air" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "specific humidity" ], @@ -38348,7 +38396,7 @@ "value": "basement" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "substructure type" ], @@ -38383,7 +38431,7 @@ "value": "radon" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface-air contaminant" ], @@ -38422,7 +38470,7 @@ "value": "10%" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface humidity" ], @@ -38458,7 +38506,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface material" ], @@ -38497,7 +38545,7 @@ "value": "0.01 gram per square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface moisture" ], @@ -38533,7 +38581,7 @@ "value": "7" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface moisture pH" ], @@ -38572,7 +38620,7 @@ "value": "15 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface temperature" ], @@ -38608,7 +38656,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -38659,7 +38707,7 @@ "value": "5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature outside house" ], @@ -38695,7 +38743,7 @@ "value": "red" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train line" ], @@ -38730,7 +38778,7 @@ "value": "forest hills" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train station collection location" ], @@ -38765,7 +38813,7 @@ "value": "end" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train stop collection location" ], @@ -38800,7 +38848,7 @@ "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "typical occupant density" ], @@ -38835,7 +38883,7 @@ "value": "Operable windows" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation type" ], @@ -38872,7 +38920,7 @@ "value": "3D scans" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "visual media" ], @@ -38911,7 +38959,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall area" ], @@ -38947,7 +38995,7 @@ "value": "fire resistive" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall construction type" ], @@ -38982,7 +39030,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall finish material" ], @@ -39021,7 +39069,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall height" ], @@ -39057,7 +39105,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall location" ], @@ -39092,7 +39140,7 @@ "value": "paneling" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall surface treatment" ], @@ -39127,7 +39175,7 @@ "value": "popcorn" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall texture" ], @@ -39166,7 +39214,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall thermal mass" ], @@ -39202,7 +39250,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall signs of water/mold" ], @@ -39242,7 +39290,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water feature size" ], @@ -39278,7 +39326,7 @@ "value": "stream" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water feature type" ], @@ -39313,7 +39361,7 @@ "value": "Sunday" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "weekday" ], @@ -39348,7 +39396,7 @@ "value": "rupture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window condition" ], @@ -39383,7 +39431,7 @@ "value": "curtains" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window covering" ], @@ -39418,7 +39466,7 @@ "value": "middle" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window horizontal position" ], @@ -39453,7 +39501,7 @@ "value": "west" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window location" ], @@ -39488,7 +39536,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window material" ], @@ -39523,7 +39571,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window open frequency" ], @@ -39562,7 +39610,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window area/size" ], @@ -39598,7 +39646,7 @@ "value": "open" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window status" ], @@ -39634,7 +39682,7 @@ "value": "fixed window" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window type" ], @@ -39669,7 +39717,7 @@ "value": "middle" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window vertical position" ], @@ -39704,7 +39752,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window signs of water/mold" ], @@ -39750,7 +39798,7 @@ "value": "9 gram per gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "absolute air humidity" ], @@ -39787,7 +39835,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "address" ], @@ -39824,7 +39872,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "adjacent rooms" ], @@ -39861,7 +39909,7 @@ "value": "plane" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aerospace structure" ], @@ -39902,7 +39950,7 @@ "value": "20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature" ], @@ -39935,7 +39983,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -39981,7 +40029,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount of light" ], @@ -40018,7 +40066,7 @@ "value": "shed" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "architectural structure" ], @@ -40058,7 +40106,7 @@ "value": "25.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average dew point" ], @@ -40095,7 +40143,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average daily occupancy" ], @@ -40135,7 +40183,7 @@ "value": "12.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "average temperature" ], @@ -40172,7 +40220,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bathroom count" ], @@ -40208,7 +40256,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bedroom count" ], @@ -40244,7 +40292,7 @@ "value": "maintenance plans" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "design, construction, and operation documents" ], @@ -40280,7 +40328,7 @@ "value": "market" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "building occupancy type" ], @@ -40316,7 +40364,7 @@ "value": "rural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "building setting" ], @@ -40356,7 +40404,7 @@ "value": "15" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure age" ], @@ -40393,7 +40441,7 @@ "value": "rural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure setting" ], @@ -40430,7 +40478,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "built structure type" ], @@ -40471,7 +40519,7 @@ "value": "410 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon dioxide" ], @@ -40513,7 +40561,7 @@ "value": "25 square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling area" ], @@ -40550,7 +40598,7 @@ "value": "damaged" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling condition" ], @@ -40586,7 +40634,7 @@ "value": "stucco" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling finish material" ], @@ -40622,7 +40670,7 @@ "value": "concrete" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling structure" ], @@ -40659,7 +40707,7 @@ "value": "popcorn" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling texture" ], @@ -40699,7 +40747,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling thermal mass" ], @@ -40736,7 +40784,7 @@ "value": "coffered" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling type" ], @@ -40772,7 +40820,7 @@ "value": "presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ceiling signs of water/mold" ], @@ -40815,7 +40863,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -40865,7 +40913,7 @@ "value": "12345" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "cooling system identifier" ], @@ -40901,7 +40949,7 @@ "value": "2018-05-11:T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "date last rain" ], @@ -40942,7 +40990,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -40996,7 +41044,7 @@ "value": "22 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dew point" ], @@ -41033,7 +41081,7 @@ "value": "revolving" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, composite" ], @@ -41069,7 +41117,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door condition" ], @@ -41105,7 +41153,7 @@ "value": "inward" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door direction of opening" ], @@ -41141,7 +41189,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door location" ], @@ -41177,7 +41225,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door material" ], @@ -41213,7 +41261,7 @@ "value": "swinging" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door movement" ], @@ -41253,7 +41301,7 @@ "value": "2.5 square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door area or size" ], @@ -41290,7 +41338,7 @@ "value": "wooden" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type" ], @@ -41326,7 +41374,7 @@ "value": "hollow" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, metal" ], @@ -41362,7 +41410,7 @@ "value": "battened" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door type, wood" ], @@ -41398,7 +41446,7 @@ "value": "presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "door signs of water/mold" ], @@ -41435,7 +41483,7 @@ "value": "sketch" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "drawings" ], @@ -41461,7 +41509,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -41499,7 +41547,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -41537,7 +41585,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -41575,7 +41623,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -41622,7 +41670,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -41630,6 +41678,7 @@ "alias": "elev", "owner": "BuiltEnvInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -41667,7 +41716,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "elevator count" ], @@ -41691,7 +41740,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -41743,7 +41792,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -41783,7 +41832,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -41823,7 +41872,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -41870,7 +41919,7 @@ "value": "4" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "escalator count" ], @@ -41910,7 +41959,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exposed ductwork" ], @@ -41947,7 +41996,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exposed pipes" ], @@ -41980,7 +42029,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -42028,7 +42077,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "exterior door count" ], @@ -42064,7 +42113,7 @@ "value": "northwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "orientations of exterior wall" ], @@ -42100,7 +42149,7 @@ "value": "southwest" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "orientations of exterior window" ], @@ -42136,7 +42185,7 @@ "value": "HEPA" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "filter type" ], @@ -42172,7 +42221,7 @@ "value": "wood burning" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fireplace type" ], @@ -42213,7 +42262,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor age" ], @@ -42254,7 +42303,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor area" ], @@ -42291,7 +42340,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor condition" ], @@ -42327,7 +42376,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor count" ], @@ -42363,7 +42412,7 @@ "value": "carpet" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor finish material" ], @@ -42399,7 +42448,7 @@ "value": "concrete" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor structure" ], @@ -42439,7 +42488,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor thermal mass" ], @@ -42476,7 +42525,7 @@ "value": "ceiling discoloration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "floor signs of water/mold" ], @@ -42512,7 +42561,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "frequency of cleaning" ], @@ -42549,7 +42598,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "frequency of cooking" ], @@ -42586,7 +42635,7 @@ "value": "chair" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "furniture" ], @@ -42622,7 +42671,7 @@ "value": "male" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gender of restroom" ], @@ -42654,7 +42703,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -42666,6 +42715,7 @@ "alias": "geo_loc_name", "owner": "BuiltEnvInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -42704,7 +42754,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hallway/corridor count" ], @@ -42740,7 +42790,7 @@ "value": "right handedness" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "handidness" ], @@ -42776,7 +42826,7 @@ "value": "heat pump" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating and cooling system type" ], @@ -42812,7 +42862,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating delivery locations" ], @@ -42848,7 +42898,7 @@ "value": "radiant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating system delivery method" ], @@ -42885,7 +42935,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "heating system identifier" ], @@ -42925,7 +42975,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "height carpet fiber mat" ], @@ -42962,7 +43012,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -43010,7 +43060,7 @@ "value": "foyer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "indoor space" ], @@ -43046,7 +43096,7 @@ "value": "wall" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "indoor surface" ], @@ -43086,7 +43136,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "inside lux light" ], @@ -43123,7 +43173,7 @@ "value": "damaged" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "interior wall condition" ], @@ -43159,7 +43209,7 @@ "value": "2018-05-11:T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "last time swept/mopped/vacuumed" ], @@ -43184,7 +43234,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -43193,6 +43243,7 @@ "alias": "lat_lon", "owner": "BuiltEnvInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -43231,7 +43282,7 @@ "value": "desk lamp" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light type" ], @@ -43267,7 +43318,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "maximum occupancy" ], @@ -43304,7 +43355,7 @@ "value": "elevator" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mechanical structure" ], @@ -43340,7 +43391,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of pets" ], @@ -43377,7 +43428,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of houseplants" ], @@ -43414,7 +43465,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "number of residents" ], @@ -43451,7 +43502,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupant density at sampling" ], @@ -43488,7 +43539,7 @@ "value": "estimate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupancy documentation" ], @@ -43524,7 +43575,7 @@ "value": "10" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "occupancy at sampling" ], @@ -43565,7 +43616,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -43612,7 +43663,7 @@ "value": "cat;5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "presence of pets, animals, or insects" ], @@ -43649,7 +43700,7 @@ "value": "West side" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "quadrant position" ], @@ -43689,7 +43740,7 @@ "value": "80%" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "relative air humidity" ], @@ -43730,7 +43781,7 @@ "value": "12 per kilogram of air" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "outside relative humidity" ], @@ -43767,7 +43818,7 @@ "value": "center of car" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "relative sampling location" ], @@ -43807,7 +43858,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room air exchange rate" ], @@ -43844,7 +43895,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room architectural elements" ], @@ -43881,7 +43932,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room condition" ], @@ -43917,7 +43968,7 @@ "value": "office" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms connected by a doorway" ], @@ -43953,7 +44004,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room count" ], @@ -43993,7 +44044,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room dimensions" ], @@ -44034,7 +44085,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room door distance" ], @@ -44071,7 +44122,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that share a door with sampling room" ], @@ -44108,7 +44159,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that are on the same hallway" ], @@ -44145,7 +44196,7 @@ "value": "interior room" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room location in building" ], @@ -44181,7 +44232,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room moisture damage or mold history" ], @@ -44221,7 +44272,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room net area" ], @@ -44258,7 +44309,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room occupancy" ], @@ -44295,7 +44346,7 @@ "value": "south corner" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room sampling position" ], @@ -44331,7 +44382,7 @@ "value": "bathroom" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room type" ], @@ -44371,7 +44422,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room volume" ], @@ -44408,7 +44459,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooms that share a wall with sampling room" ], @@ -44445,7 +44496,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "room window count" ], @@ -44481,7 +44532,7 @@ "value": "4th floor" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling floor" ], @@ -44517,7 +44568,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling room ID or name" ], @@ -44553,7 +44604,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample size sorting method" ], @@ -44594,7 +44645,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling time outside" ], @@ -44630,7 +44681,7 @@ "value": "foggy" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sampling day weather" ], @@ -44662,7 +44713,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -44708,7 +44759,7 @@ "value": "autumn [NCIT:C94733]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "season" ], @@ -44746,7 +44797,7 @@ "value": "Winter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "seasonal use" ], @@ -44782,7 +44833,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device signs of water/mold" ], @@ -44819,7 +44870,7 @@ "value": "new" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device condition" ], @@ -44855,7 +44906,7 @@ "value": "exterior" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device location" ], @@ -44892,7 +44943,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device material" ], @@ -44929,7 +44980,7 @@ "value": "slatted aluminum awning" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "shading device type" ], @@ -44961,7 +45012,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -45008,7 +45059,7 @@ "value": "typically occupied" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "space typical state" ], @@ -45045,7 +45096,7 @@ "value": "construction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "specifications" ], @@ -45071,7 +45122,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -45123,7 +45174,7 @@ "value": "15 per kilogram of air" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "specific humidity" ], @@ -45160,7 +45211,7 @@ "value": "basement" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "substructure type" ], @@ -45196,7 +45247,7 @@ "value": "radon" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface-air contaminant" ], @@ -45236,7 +45287,7 @@ "value": "10%" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface humidity" ], @@ -45273,7 +45324,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface material" ], @@ -45313,7 +45364,7 @@ "value": "0.01 gram per square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface moisture" ], @@ -45350,7 +45401,7 @@ "value": "7" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface moisture pH" ], @@ -45390,7 +45441,7 @@ "value": "15 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "surface temperature" ], @@ -45427,7 +45478,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -45479,7 +45530,7 @@ "value": "5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature outside house" ], @@ -45516,7 +45567,7 @@ "value": "red" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train line" ], @@ -45552,7 +45603,7 @@ "value": "forest hills" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train station collection location" ], @@ -45588,7 +45639,7 @@ "value": "end" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "train stop collection location" ], @@ -45624,7 +45675,7 @@ "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "typical occupant density" ], @@ -45660,7 +45711,7 @@ "value": "Operable windows" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ventilation type" ], @@ -45698,7 +45749,7 @@ "value": "3D scans" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "visual media" ], @@ -45738,7 +45789,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall area" ], @@ -45775,7 +45826,7 @@ "value": "fire resistive" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall construction type" ], @@ -45811,7 +45862,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall finish material" ], @@ -45851,7 +45902,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall height" ], @@ -45888,7 +45939,7 @@ "value": "north" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall location" ], @@ -45924,7 +45975,7 @@ "value": "paneling" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall surface treatment" ], @@ -45960,7 +46011,7 @@ "value": "popcorn" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall texture" ], @@ -46000,7 +46051,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall thermal mass" ], @@ -46037,7 +46088,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wall signs of water/mold" ], @@ -46078,7 +46129,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water feature size" ], @@ -46115,7 +46166,7 @@ "value": "stream" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water feature type" ], @@ -46151,7 +46202,7 @@ "value": "Sunday" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "weekday" ], @@ -46187,7 +46238,7 @@ "value": "rupture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window condition" ], @@ -46223,7 +46274,7 @@ "value": "curtains" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window covering" ], @@ -46259,7 +46310,7 @@ "value": "middle" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window horizontal position" ], @@ -46295,7 +46346,7 @@ "value": "west" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window location" ], @@ -46331,7 +46382,7 @@ "value": "wood" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window material" ], @@ -46367,7 +46418,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window open frequency" ], @@ -46407,7 +46458,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window area/size" ], @@ -46444,7 +46495,7 @@ "value": "open" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window status" ], @@ -46481,7 +46532,7 @@ "value": "fixed window" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window type" ], @@ -46517,7 +46568,7 @@ "value": "middle" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window vertical position" ], @@ -46553,7 +46604,7 @@ "value": "no presence of mold visible" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "window signs of water/mold" ], @@ -46580,7 +46631,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -46617,7 +46668,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -46662,7 +46713,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -46721,7 +46772,7 @@ "value": "-80" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{float}", "owner": "Biosample", @@ -46737,7 +46788,7 @@ "name": "project_id", "description": "Proposal IDs or names associated with dataset", "title": "project ID", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -46756,9 +46807,9 @@ "description": "If sending biological replicates, indicate the rep number here.", "title": "replicate number", "comments": [ - "This will guide staff in ensuring your samples are block & randomized correctly" + "This will guide staff in ensuring your samples are blocked & randomized correctly" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{integer}", "owner": "Biosample", @@ -46788,7 +46839,7 @@ "value": "5 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{float} {unit}", "multivalued": false, @@ -46815,7 +46866,7 @@ "value": "water extracted soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "owner": "Biosample", "domain_of": [ @@ -46839,7 +46890,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{integer}", "owner": "Biosample", @@ -46872,7 +46923,7 @@ "value": "-80" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{float}", "alias": "emsl_store_temp", @@ -46889,7 +46940,7 @@ "name": "project_id", "description": "Proposal IDs or names associated with dataset", "title": "project ID", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -46909,9 +46960,9 @@ "description": "If sending biological replicates, indicate the rep number here.", "title": "replicate number", "comments": [ - "This will guide staff in ensuring your samples are block & randomized correctly" + "This will guide staff in ensuring your samples are blocked & randomized correctly" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{integer}", "alias": "replicate_number", @@ -46942,7 +46993,7 @@ "value": "5 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{float} {unit}", "multivalued": false, @@ -46970,7 +47021,7 @@ "value": "water extracted soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "alias": "sample_type", "owner": "EmslInterface", @@ -46995,7 +47046,7 @@ "value": "2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{integer}", "alias": "technical_reps", @@ -47017,7 +47068,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -47055,7 +47106,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -47101,7 +47152,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -47255,7 +47306,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "additional info" ], @@ -47296,7 +47347,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -47338,7 +47389,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -47380,7 +47431,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -47425,7 +47476,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "API gravity" ], @@ -47466,7 +47517,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aromatics wt%" ], @@ -47508,7 +47559,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "asphaltenes wt%" ], @@ -47546,7 +47597,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "basin name" ], @@ -47587,7 +47638,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "benzene" ], @@ -47628,7 +47679,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -47672,7 +47723,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -47724,7 +47775,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -47771,7 +47822,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -47824,7 +47875,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -47864,7 +47915,7 @@ "value": "Continental - Alluvial" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depositional environment" ], @@ -47905,7 +47956,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -47958,7 +48009,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -48003,7 +48054,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -48048,7 +48099,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -48090,7 +48141,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved iron" ], @@ -48131,7 +48182,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -48175,7 +48226,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen in fluids" ], @@ -48202,7 +48253,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -48239,7 +48290,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -48276,7 +48327,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -48313,7 +48364,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -48359,13 +48410,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -48391,7 +48443,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -48442,7 +48494,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -48481,7 +48533,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -48520,7 +48572,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -48570,7 +48622,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ethylbenzene" ], @@ -48603,7 +48655,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -48650,7 +48702,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "field name" ], @@ -48683,7 +48735,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -48694,6 +48746,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -48732,7 +48785,7 @@ "value": "Gas" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon type produced" ], @@ -48768,7 +48821,7 @@ "value": "Oil Sand" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource type" ], @@ -48808,7 +48861,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "formation water salinity" ], @@ -48845,7 +48898,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource geological age" ], @@ -48885,7 +48938,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original pressure" ], @@ -48926,7 +48979,7 @@ "value": "150-295 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original temperature" ], @@ -48963,7 +49016,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -48999,7 +49052,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -49007,6 +49060,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -49045,7 +49099,7 @@ "value": "Volcanic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "lithology" ], @@ -49085,7 +49139,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -49124,7 +49178,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -49175,7 +49229,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -49221,7 +49275,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -49266,7 +49320,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count qPCR information" ], @@ -49307,7 +49361,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -49357,7 +49411,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "oil water contact depth" ], @@ -49378,7 +49432,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -49424,7 +49478,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "permeability" ], @@ -49463,7 +49517,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -49505,7 +49559,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -49549,7 +49603,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "porosity" ], @@ -49590,7 +49644,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -49635,7 +49689,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pour point" ], @@ -49676,7 +49730,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -49717,7 +49771,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reservoir name" ], @@ -49758,7 +49812,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "resins wt%" ], @@ -49800,7 +49854,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -49845,7 +49899,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -49891,7 +49945,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -49936,7 +49990,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -49986,7 +50040,7 @@ "value": "1534 meter;MSL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample measured depth" ], @@ -50028,7 +50082,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -50075,7 +50129,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -50120,7 +50174,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -50169,7 +50223,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -50216,7 +50270,7 @@ "value": "biofilm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample subtype" ], @@ -50256,7 +50310,7 @@ "value": "5 days;-20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample transport conditions" ], @@ -50297,7 +50351,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample true vertical depth subsea" ], @@ -50333,7 +50387,7 @@ "value": "built environment sample [GENEPIO:0001248]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample type" ], @@ -50371,7 +50425,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample well name" ], @@ -50404,7 +50458,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -50453,7 +50507,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "saturates wt%" ], @@ -50487,7 +50541,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -50537,7 +50591,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -50569,7 +50623,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -50616,7 +50670,7 @@ "value": "Marine" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock depositional environment" ], @@ -50651,7 +50705,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock geological age" ], @@ -50686,7 +50740,7 @@ "value": "Type IV" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock kerogen type" ], @@ -50721,7 +50775,7 @@ "value": "Coal" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock lithology" ], @@ -50760,7 +50814,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -50805,7 +50859,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate in formation water" ], @@ -50846,7 +50900,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -50891,7 +50945,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -50934,7 +50988,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total acid number" ], @@ -50971,7 +51025,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -51022,7 +51076,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "toluene" ], @@ -51063,7 +51117,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total iron" ], @@ -51104,7 +51158,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -51147,7 +51201,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -51189,7 +51243,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total sulfur" ], @@ -51230,7 +51284,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource pressure" ], @@ -51271,7 +51325,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource temperature" ], @@ -51312,7 +51366,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile fatty acids" ], @@ -51353,7 +51407,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "vfa in formation water" ], @@ -51394,7 +51448,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "viscosity" ], @@ -51431,7 +51485,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "well identification number" ], @@ -51472,7 +51526,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "xylene" ], @@ -51511,7 +51565,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "additional info" ], @@ -51553,7 +51607,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -51596,7 +51650,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -51639,7 +51693,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -51685,7 +51739,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "API gravity" ], @@ -51727,7 +51781,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aromatics wt%" ], @@ -51770,7 +51824,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "asphaltenes wt%" ], @@ -51809,7 +51863,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "basin name" ], @@ -51851,7 +51905,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "benzene" ], @@ -51893,7 +51947,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -51938,7 +51992,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -51991,7 +52045,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -52039,7 +52093,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -52093,7 +52147,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -52134,7 +52188,7 @@ "value": "Continental - Alluvial" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depositional environment" ], @@ -52176,7 +52230,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -52230,7 +52284,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -52276,7 +52330,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -52322,7 +52376,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -52365,7 +52419,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved iron" ], @@ -52407,7 +52461,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -52452,7 +52506,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen in fluids" ], @@ -52480,7 +52534,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -52518,7 +52572,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -52556,7 +52610,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -52594,7 +52648,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -52641,7 +52695,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -52649,6 +52703,7 @@ "alias": "elev", "owner": "HcrCoresInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -52674,7 +52729,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -52726,7 +52781,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -52766,7 +52821,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -52806,7 +52861,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -52857,7 +52912,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ethylbenzene" ], @@ -52891,7 +52946,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -52939,7 +52994,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "field name" ], @@ -52973,7 +53028,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -52985,6 +53040,7 @@ "alias": "geo_loc_name", "owner": "HcrCoresInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -53023,7 +53079,7 @@ "value": "Gas" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon type produced" ], @@ -53060,7 +53116,7 @@ "value": "Oil Sand" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource type" ], @@ -53101,7 +53157,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "formation water salinity" ], @@ -53139,7 +53195,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource geological age" ], @@ -53180,7 +53236,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original pressure" ], @@ -53222,7 +53278,7 @@ "value": "150-295 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original temperature" ], @@ -53260,7 +53316,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -53297,7 +53353,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -53306,6 +53362,7 @@ "alias": "lat_lon", "owner": "HcrCoresInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -53344,7 +53401,7 @@ "value": "Volcanic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "lithology" ], @@ -53385,7 +53442,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -53425,7 +53482,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -53477,7 +53534,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -53524,7 +53581,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -53570,7 +53627,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count qPCR information" ], @@ -53612,7 +53669,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -53663,7 +53720,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "oil water contact depth" ], @@ -53685,7 +53742,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -53732,7 +53789,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "permeability" ], @@ -53772,7 +53829,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -53815,7 +53872,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -53860,7 +53917,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "porosity" ], @@ -53902,7 +53959,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -53948,7 +54005,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pour point" ], @@ -53990,7 +54047,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -54032,7 +54089,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reservoir name" ], @@ -54074,7 +54131,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "resins wt%" ], @@ -54117,7 +54174,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -54163,7 +54220,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -54210,7 +54267,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -54256,7 +54313,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -54307,7 +54364,7 @@ "value": "1534 meter;MSL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample measured depth" ], @@ -54350,7 +54407,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -54398,7 +54455,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -54444,7 +54501,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -54494,7 +54551,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -54542,7 +54599,7 @@ "value": "biofilm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample subtype" ], @@ -54583,7 +54640,7 @@ "value": "5 days;-20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample transport conditions" ], @@ -54625,7 +54682,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample true vertical depth subsea" ], @@ -54662,7 +54719,7 @@ "value": "built environment sample [GENEPIO:0001248]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample type" ], @@ -54701,7 +54758,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample well name" ], @@ -54735,7 +54792,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -54785,7 +54842,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "saturates wt%" ], @@ -54820,7 +54877,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -54871,7 +54928,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -54904,7 +54961,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -54952,7 +55009,7 @@ "value": "Marine" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock depositional environment" ], @@ -54988,7 +55045,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock geological age" ], @@ -55024,7 +55081,7 @@ "value": "Type IV" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock kerogen type" ], @@ -55060,7 +55117,7 @@ "value": "Coal" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "source rock lithology" ], @@ -55100,7 +55157,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -55146,7 +55203,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate in formation water" ], @@ -55188,7 +55245,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -55234,7 +55291,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -55278,7 +55335,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total acid number" ], @@ -55316,7 +55373,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -55368,7 +55425,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "toluene" ], @@ -55410,7 +55467,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total iron" ], @@ -55452,7 +55509,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -55496,7 +55553,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -55539,7 +55596,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total sulfur" ], @@ -55581,7 +55638,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource pressure" ], @@ -55623,7 +55680,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource temperature" ], @@ -55665,7 +55722,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile fatty acids" ], @@ -55707,7 +55764,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "vfa in formation water" ], @@ -55749,7 +55806,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "viscosity" ], @@ -55787,7 +55844,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "well identification number" ], @@ -55829,7 +55886,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "xylene" ], @@ -55857,7 +55914,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -55896,7 +55953,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -55943,7 +56000,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -56103,7 +56160,7 @@ "value": "Polymer Addition;2018-06-21T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "secondary and tertiary recovery methods and start date" ], @@ -56138,7 +56195,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "additional info" ], @@ -56179,7 +56236,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -56221,7 +56278,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -56263,7 +56320,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -56308,7 +56365,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "API gravity" ], @@ -56349,7 +56406,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aromatics wt%" ], @@ -56391,7 +56448,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "asphaltenes wt%" ], @@ -56429,7 +56486,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "basin name" ], @@ -56470,7 +56527,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "benzene" ], @@ -56507,7 +56564,7 @@ "value": "ALPHA 1427;Baker Hughes;2008-01-23" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biocide administration" ], @@ -56547,7 +56604,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biocide administration method" ], @@ -56587,7 +56644,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -56631,7 +56688,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -56683,7 +56740,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical treatment method" ], @@ -56719,7 +56776,7 @@ "value": "ACCENT 1125;DOW;2010-11-17" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical treatment" ], @@ -56759,7 +56816,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -56806,7 +56863,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -56859,7 +56916,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -56899,7 +56956,7 @@ "value": "Continental - Alluvial" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depositional environment" ], @@ -56940,7 +56997,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -56993,7 +57050,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -57038,7 +57095,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -57083,7 +57140,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -57125,7 +57182,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved iron" ], @@ -57166,7 +57223,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -57210,7 +57267,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen in fluids" ], @@ -57237,7 +57294,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -57274,7 +57331,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -57311,7 +57368,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -57348,7 +57405,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -57394,13 +57451,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -57426,7 +57484,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -57477,7 +57535,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -57516,7 +57574,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -57555,7 +57613,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -57605,7 +57663,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ethylbenzene" ], @@ -57638,7 +57696,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -57685,7 +57743,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "field name" ], @@ -57718,7 +57776,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -57729,6 +57787,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -57767,7 +57826,7 @@ "value": "Gas" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon type produced" ], @@ -57803,7 +57862,7 @@ "value": "Oil Sand" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource type" ], @@ -57843,7 +57902,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "formation water salinity" ], @@ -57880,7 +57939,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource geological age" ], @@ -57920,7 +57979,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original pressure" ], @@ -57961,7 +58020,7 @@ "value": "150-295 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original temperature" ], @@ -57998,7 +58057,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -58045,7 +58104,7 @@ "value": "2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "injection water breakthrough date of specific well" ], @@ -58084,7 +58143,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "injection water fraction" ], @@ -58109,7 +58168,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -58117,6 +58176,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -58155,7 +58215,7 @@ "value": "Volcanic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "lithology" ], @@ -58195,7 +58255,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -58234,7 +58294,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -58285,7 +58345,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -58331,7 +58391,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -58376,7 +58436,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count qPCR information" ], @@ -58417,7 +58477,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -58448,7 +58508,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -58493,7 +58553,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -58535,7 +58595,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -58579,7 +58639,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -58624,7 +58684,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pour point" ], @@ -58665,7 +58725,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -58710,7 +58770,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "production rate" ], @@ -58746,7 +58806,7 @@ "value": "2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "production start date" ], @@ -58781,7 +58841,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reservoir name" ], @@ -58822,7 +58882,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "resins wt%" ], @@ -58864,7 +58924,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -58909,7 +58969,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -58955,7 +59015,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -59001,7 +59061,7 @@ "value": "well" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection point" ], @@ -59040,7 +59100,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "corrosion rate at sample location" ], @@ -59075,7 +59135,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -59125,7 +59185,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "preservative added to sample" ], @@ -59168,7 +59228,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -59215,7 +59275,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -59260,7 +59320,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -59309,7 +59369,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -59356,7 +59416,7 @@ "value": "biofilm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample subtype" ], @@ -59396,7 +59456,7 @@ "value": "5 days;-20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample transport conditions" ], @@ -59433,7 +59493,7 @@ "value": "built environment sample [GENEPIO:0001248]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample type" ], @@ -59471,7 +59531,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample well name" ], @@ -59504,7 +59564,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -59553,7 +59613,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "saturates wt%" ], @@ -59587,7 +59647,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -59637,7 +59697,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -59669,7 +59729,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -59720,7 +59780,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -59765,7 +59825,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate in formation water" ], @@ -59806,7 +59866,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -59851,7 +59911,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -59894,7 +59954,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total acid number" ], @@ -59931,7 +59991,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -59982,7 +60042,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "toluene" ], @@ -60023,7 +60083,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total iron" ], @@ -60064,7 +60124,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -60107,7 +60167,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -60149,7 +60209,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total sulfur" ], @@ -60190,7 +60250,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource pressure" ], @@ -60231,7 +60291,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource temperature" ], @@ -60272,7 +60332,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile fatty acids" ], @@ -60313,7 +60373,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "vfa in formation water" ], @@ -60354,7 +60414,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "viscosity" ], @@ -60395,7 +60455,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water cut" ], @@ -60435,7 +60495,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water production rate" ], @@ -60471,7 +60531,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "well identification number" ], @@ -60512,7 +60572,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "xylene" ], @@ -60551,7 +60611,7 @@ "value": "Polymer Addition;2018-06-21T14:30Z" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "secondary and tertiary recovery methods and start date" ], @@ -60587,7 +60647,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "additional info" ], @@ -60629,7 +60689,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -60672,7 +60732,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -60715,7 +60775,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -60761,7 +60821,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "API gravity" ], @@ -60803,7 +60863,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aromatics wt%" ], @@ -60846,7 +60906,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "asphaltenes wt%" ], @@ -60885,7 +60945,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "basin name" ], @@ -60927,7 +60987,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "benzene" ], @@ -60965,7 +61025,7 @@ "value": "ALPHA 1427;Baker Hughes;2008-01-23" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biocide administration" ], @@ -61006,7 +61066,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biocide administration method" ], @@ -61047,7 +61107,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -61092,7 +61152,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -61145,7 +61205,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical treatment method" ], @@ -61182,7 +61242,7 @@ "value": "ACCENT 1125;DOW;2010-11-17" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical treatment" ], @@ -61223,7 +61283,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -61271,7 +61331,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -61325,7 +61385,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -61366,7 +61426,7 @@ "value": "Continental - Alluvial" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depositional environment" ], @@ -61408,7 +61468,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -61462,7 +61522,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -61508,7 +61568,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -61554,7 +61614,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -61597,7 +61657,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved iron" ], @@ -61639,7 +61699,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -61684,7 +61744,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen in fluids" ], @@ -61712,7 +61772,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -61750,7 +61810,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -61788,7 +61848,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -61826,7 +61886,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -61873,7 +61933,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -61881,6 +61941,7 @@ "alias": "elev", "owner": "HcrFluidsSwabsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -61906,7 +61967,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -61958,7 +62019,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -61998,7 +62059,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -62038,7 +62099,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -62089,7 +62150,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ethylbenzene" ], @@ -62123,7 +62184,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -62171,7 +62232,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "field name" ], @@ -62205,7 +62266,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -62217,6 +62278,7 @@ "alias": "geo_loc_name", "owner": "HcrFluidsSwabsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -62255,7 +62317,7 @@ "value": "Gas" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon type produced" ], @@ -62292,7 +62354,7 @@ "value": "Oil Sand" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource type" ], @@ -62333,7 +62395,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "formation water salinity" ], @@ -62371,7 +62433,7 @@ "value": "Silurian" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource geological age" ], @@ -62412,7 +62474,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original pressure" ], @@ -62454,7 +62516,7 @@ "value": "150-295 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "hydrocarbon resource original temperature" ], @@ -62492,7 +62554,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -62540,7 +62602,7 @@ "value": "2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "injection water breakthrough date of specific well" ], @@ -62580,7 +62642,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "injection water fraction" ], @@ -62606,7 +62668,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -62615,6 +62677,7 @@ "alias": "lat_lon", "owner": "HcrFluidsSwabsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -62653,7 +62716,7 @@ "value": "Volcanic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "lithology" ], @@ -62694,7 +62757,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -62734,7 +62797,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -62786,7 +62849,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -62833,7 +62896,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -62879,7 +62942,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count qPCR information" ], @@ -62921,7 +62984,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -62953,7 +63016,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -62999,7 +63062,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -63042,7 +63105,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -63087,7 +63150,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -63133,7 +63196,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pour point" ], @@ -63175,7 +63238,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -63221,7 +63284,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "production rate" ], @@ -63258,7 +63321,7 @@ "value": "2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "production start date" ], @@ -63294,7 +63357,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reservoir name" ], @@ -63336,7 +63399,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "resins wt%" ], @@ -63379,7 +63442,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -63425,7 +63488,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -63472,7 +63535,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -63519,7 +63582,7 @@ "value": "well" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection point" ], @@ -63559,7 +63622,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "corrosion rate at sample location" ], @@ -63595,7 +63658,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -63646,7 +63709,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "preservative added to sample" ], @@ -63690,7 +63753,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -63738,7 +63801,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -63784,7 +63847,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -63834,7 +63897,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -63882,7 +63945,7 @@ "value": "biofilm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample subtype" ], @@ -63923,7 +63986,7 @@ "value": "5 days;-20 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample transport conditions" ], @@ -63961,7 +64024,7 @@ "value": "built environment sample [GENEPIO:0001248]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample type" ], @@ -64000,7 +64063,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample well name" ], @@ -64034,7 +64097,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -64084,7 +64147,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "saturates wt%" ], @@ -64119,7 +64182,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -64170,7 +64233,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -64203,7 +64266,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -64255,7 +64318,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -64301,7 +64364,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate in formation water" ], @@ -64343,7 +64406,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -64389,7 +64452,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -64433,7 +64496,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total acid number" ], @@ -64471,7 +64534,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -64523,7 +64586,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "toluene" ], @@ -64565,7 +64628,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total iron" ], @@ -64607,7 +64670,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -64651,7 +64714,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -64694,7 +64757,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total sulfur" ], @@ -64736,7 +64799,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource pressure" ], @@ -64778,7 +64841,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth (TVDSS) of hydrocarbon resource temperature" ], @@ -64820,7 +64883,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "volatile fatty acids" ], @@ -64862,7 +64925,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "vfa in formation water" ], @@ -64904,7 +64967,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "viscosity" ], @@ -64946,7 +65009,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water cut" ], @@ -64987,7 +65050,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water production rate" ], @@ -65024,7 +65087,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "well identification number" ], @@ -65066,7 +65129,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "xylene" ], @@ -65094,7 +65157,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -65134,7 +65197,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -65182,7 +65245,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -65299,7 +65362,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -65340,7 +65403,7 @@ "value": "A/3*B" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ancestral data" ], @@ -65377,7 +65440,7 @@ "value": "natural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biological status" ], @@ -65417,7 +65480,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host blood pressure diastolic" ], @@ -65457,7 +65520,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host blood pressure systolic" ], @@ -65496,7 +65559,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -65550,7 +65613,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -65604,7 +65667,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -65643,7 +65706,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -65680,7 +65743,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -65717,7 +65780,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -65754,7 +65817,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -65800,13 +65863,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -65832,7 +65896,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -65883,7 +65947,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -65922,7 +65986,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -65961,7 +66025,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -66003,7 +66067,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -66050,7 +66114,7 @@ "value": "aox1A transgenic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "genetic modification" ], @@ -66083,7 +66147,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -66094,6 +66158,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -66132,7 +66197,7 @@ "value": "yes;due date:2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gravidity" ], @@ -66168,7 +66233,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -66219,7 +66284,7 @@ "value": "10 days" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host age" ], @@ -66256,7 +66321,7 @@ "value": "nasopharynx" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body habitat" ], @@ -66292,7 +66357,7 @@ "value": "Portion of mucus [fma66938]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body product" ], @@ -66329,7 +66394,7 @@ "value": "gill [UBERON:0002535]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body site" ], @@ -66370,7 +66435,7 @@ "value": "15 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body temperature" ], @@ -66406,7 +66471,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host color" ], @@ -66442,7 +66507,7 @@ "value": "human" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host common name" ], @@ -66479,7 +66544,7 @@ "value": "herbivore" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host diet" ], @@ -66519,7 +66584,7 @@ "value": "500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host dry mass" ], @@ -66556,7 +66621,7 @@ "value": "offspring;Mussel25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host family relationship" ], @@ -66592,7 +66657,7 @@ "value": "C57BL/6" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host genotype" ], @@ -66629,7 +66694,7 @@ "value": "https://academic.oup.com/icesjms/article/68/2/349/617247" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host growth conditions" ], @@ -66669,7 +66734,7 @@ "value": "0.1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host height" ], @@ -66706,7 +66771,7 @@ "value": "corn feed;P2H" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host last meal" ], @@ -66746,7 +66811,7 @@ "value": "1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host length" ], @@ -66783,7 +66848,7 @@ "value": "adult" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host life stage" ], @@ -66820,7 +66885,7 @@ "value": "elongated [PATO:0001154]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host phenotype" ], @@ -66858,7 +66923,7 @@ "value": "non-binary" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host sex" ], @@ -66893,7 +66958,7 @@ "value": "round" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host shape" ], @@ -66929,7 +66994,7 @@ "value": "MPI123" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subject id" ], @@ -66965,7 +67030,7 @@ "value": "serovar:Newport, variety:glabrum, cultivar: Red Delicious" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subspecific genetic lineage" ], @@ -67002,7 +67067,7 @@ "value": "rock" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host substrate" ], @@ -67038,7 +67103,7 @@ "value": "flukeworms" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed host symbionts" ], @@ -67073,7 +67138,7 @@ "comments": [ "Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host taxid" ], @@ -67113,7 +67178,7 @@ "value": "2500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host total mass" ], @@ -67139,7 +67204,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -67147,6 +67212,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -67185,7 +67251,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -67236,7 +67302,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -67267,7 +67333,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -67309,7 +67375,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -67356,7 +67422,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -67402,7 +67468,7 @@ "value": "farm sample" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample capture status" ], @@ -67437,7 +67503,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -67483,7 +67549,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -67529,7 +67595,7 @@ "value": "infection" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample disease stage" ], @@ -67564,7 +67630,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -67616,7 +67682,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -67663,7 +67729,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -67708,7 +67774,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -67757,7 +67823,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -67800,7 +67866,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -67841,7 +67907,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -67877,7 +67943,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -67924,7 +67990,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -67969,7 +68035,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -68011,7 +68077,7 @@ "value": "A/3*B" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ancestral data" ], @@ -68049,7 +68115,7 @@ "value": "natural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biological status" ], @@ -68090,7 +68156,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host blood pressure diastolic" ], @@ -68131,7 +68197,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host blood pressure systolic" ], @@ -68171,7 +68237,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -68226,7 +68292,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -68281,7 +68347,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -68321,7 +68387,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -68359,7 +68425,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -68397,7 +68463,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -68435,7 +68501,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -68482,7 +68548,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -68490,6 +68556,7 @@ "alias": "elev", "owner": "HostAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -68515,7 +68582,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -68567,7 +68634,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -68607,7 +68674,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -68647,7 +68714,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -68690,7 +68757,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -68738,7 +68805,7 @@ "value": "aox1A transgenic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "genetic modification" ], @@ -68772,7 +68839,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -68784,6 +68851,7 @@ "alias": "geo_loc_name", "owner": "HostAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -68822,7 +68890,7 @@ "value": "yes;due date:2018-05-11" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gravidity" ], @@ -68859,7 +68927,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -68911,7 +68979,7 @@ "value": "10 days" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host age" ], @@ -68949,7 +69017,7 @@ "value": "nasopharynx" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body habitat" ], @@ -68986,7 +69054,7 @@ "value": "Portion of mucus [fma66938]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body product" ], @@ -69024,7 +69092,7 @@ "value": "gill [UBERON:0002535]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body site" ], @@ -69066,7 +69134,7 @@ "value": "15 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host body temperature" ], @@ -69103,7 +69171,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host color" ], @@ -69140,7 +69208,7 @@ "value": "human" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host common name" ], @@ -69178,7 +69246,7 @@ "value": "herbivore" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host diet" ], @@ -69219,7 +69287,7 @@ "value": "500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host dry mass" ], @@ -69257,7 +69325,7 @@ "value": "offspring;Mussel25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host family relationship" ], @@ -69294,7 +69362,7 @@ "value": "C57BL/6" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host genotype" ], @@ -69332,7 +69400,7 @@ "value": "https://academic.oup.com/icesjms/article/68/2/349/617247" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host growth conditions" ], @@ -69373,7 +69441,7 @@ "value": "0.1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host height" ], @@ -69411,7 +69479,7 @@ "value": "corn feed;P2H" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host last meal" ], @@ -69452,7 +69520,7 @@ "value": "1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host length" ], @@ -69490,7 +69558,7 @@ "value": "adult" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host life stage" ], @@ -69528,7 +69596,7 @@ "value": "elongated [PATO:0001154]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host phenotype" ], @@ -69567,7 +69635,7 @@ "value": "non-binary" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host sex" ], @@ -69603,7 +69671,7 @@ "value": "round" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host shape" ], @@ -69640,7 +69708,7 @@ "value": "MPI123" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subject id" ], @@ -69677,7 +69745,7 @@ "value": "serovar:Newport, variety:glabrum, cultivar: Red Delicious" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subspecific genetic lineage" ], @@ -69715,7 +69783,7 @@ "value": "rock" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host substrate" ], @@ -69752,7 +69820,7 @@ "value": "flukeworms" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed host symbionts" ], @@ -69788,7 +69856,7 @@ "comments": [ "Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host taxid" ], @@ -69829,7 +69897,7 @@ "value": "2500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host total mass" ], @@ -69856,7 +69924,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -69865,6 +69933,7 @@ "alias": "lat_lon", "owner": "HostAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -69903,7 +69972,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -69955,7 +70024,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -69987,7 +70056,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -70030,7 +70099,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -70078,7 +70147,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -70125,7 +70194,7 @@ "value": "farm sample" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample capture status" ], @@ -70161,7 +70230,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -70208,7 +70277,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -70255,7 +70324,7 @@ "value": "infection" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample disease stage" ], @@ -70291,7 +70360,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -70344,7 +70413,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -70392,7 +70461,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -70438,7 +70507,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -70488,7 +70557,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -70532,7 +70601,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -70574,7 +70643,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -70611,7 +70680,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -70659,7 +70728,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -70697,7 +70766,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -70738,7 +70807,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -70787,7 +70856,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -70869,12 +70938,14 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "owner": "Biosample", "domain_of": [ "Biosample", + "ProcessedSample", "JgiMgInterface" ], "slot_group": "jgi_metagenomics_section", @@ -70893,8 +70964,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "owner": "Biosample", "domain_of": [ @@ -70916,12 +70988,16 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "owner": "Biosample", "domain_of": [ "Biosample", + "ProcessedSample", "JgiMgInterface" ], "slot_group": "jgi_metagenomics_section", @@ -70940,7 +71016,7 @@ "value": "plate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "owner": "Biosample", "domain_of": [ @@ -70966,7 +71042,7 @@ "value": "B2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 11, "string_serialization": "{96 well plate pos}", "multivalued": false, @@ -70991,7 +71067,7 @@ "value": "Pond_MT_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "string_serialization": "{text < 20 characters}", "multivalued": false, @@ -71017,7 +71093,7 @@ "value": "no" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "owner": "Biosample", "domain_of": [ @@ -71038,7 +71114,7 @@ "value": "phenol/chloroform extraction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "string_serialization": "{text}", "multivalued": false, @@ -71063,7 +71139,7 @@ "value": "John Jones" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "string_serialization": "{text}", "multivalued": false, @@ -71091,7 +71167,7 @@ "value": "187654" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{text}", "multivalued": false, @@ -71114,7 +71190,7 @@ "value": "Water" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 12, "owner": "Biosample", "domain_of": [ @@ -71135,7 +71211,7 @@ "value": "JGI_pond_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{text}", "multivalued": false, @@ -71160,7 +71236,7 @@ "value": "1191234" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -71185,7 +71261,7 @@ "value": "JGI Pond metagenomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "string_serialization": "{text}", "multivalued": false, @@ -71210,7 +71286,7 @@ "value": "Jane Johnson" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "string_serialization": "{text}", "multivalued": false, @@ -71228,14 +71304,14 @@ "name": "dna_volume", "title": "DNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{float}", "owner": "Biosample", @@ -71247,7 +71323,7 @@ "range": "float", "required": true, "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "proposal_dna": { @@ -71261,7 +71337,7 @@ "value": "504000" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "string_serialization": "{text}", "multivalued": false, @@ -71293,13 +71369,15 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "alias": "dna_absorb1", "owner": "JgiMgInterface", "domain_of": [ "Biosample", + "ProcessedSample", "JgiMgInterface" ], "slot_group": "jgi_metagenomics_section", @@ -71318,8 +71396,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "alias": "dna_absorb2", "owner": "JgiMgInterface", @@ -71342,13 +71421,17 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "alias": "dna_concentration", "owner": "JgiMgInterface", "domain_of": [ "Biosample", + "ProcessedSample", "JgiMgInterface" ], "slot_group": "jgi_metagenomics_section", @@ -71367,7 +71450,7 @@ "value": "plate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "alias": "dna_cont_type", "owner": "JgiMgInterface", @@ -71394,7 +71477,7 @@ "value": "B2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 11, "string_serialization": "{96 well plate pos}", "multivalued": false, @@ -71420,7 +71503,7 @@ "value": "Pond_MT_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "string_serialization": "{text < 20 characters}", "multivalued": false, @@ -71447,7 +71530,7 @@ "value": "no" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "alias": "dna_dnase", "owner": "JgiMgInterface", @@ -71469,7 +71552,7 @@ "value": "phenol/chloroform extraction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "string_serialization": "{text}", "multivalued": false, @@ -71495,7 +71578,7 @@ "value": "John Jones" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "string_serialization": "{text}", "multivalued": false, @@ -71524,7 +71607,7 @@ "value": "187654" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{text}", "multivalued": false, @@ -71548,7 +71631,7 @@ "value": "Water" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 12, "alias": "dna_sample_format", "owner": "JgiMgInterface", @@ -71570,7 +71653,7 @@ "value": "JGI_pond_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{text}", "multivalued": false, @@ -71596,7 +71679,7 @@ "value": "1191234" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -71622,7 +71705,7 @@ "value": "JGI Pond metagenomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "string_serialization": "{text}", "multivalued": false, @@ -71648,7 +71731,7 @@ "value": "Jane Johnson" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "string_serialization": "{text}", "multivalued": false, @@ -71667,14 +71750,14 @@ "name": "dna_volume", "title": "DNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{float}", "alias": "dna_volume", @@ -71687,7 +71770,7 @@ "range": "float", "required": true, "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "proposal_dna": { @@ -71701,7 +71784,7 @@ "value": "504000" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "string_serialization": "{text}", "multivalued": false, @@ -71725,7 +71808,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -71767,7 +71850,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -71817,7 +71900,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -71941,7 +72024,7 @@ "value": "no" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "owner": "Biosample", "domain_of": [ @@ -71964,7 +72047,7 @@ "value": "504000" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "string_serialization": "{text}", "multivalued": false, @@ -71990,8 +72073,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "owner": "Biosample", "domain_of": [ @@ -72014,8 +72098,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "owner": "Biosample", "domain_of": [ @@ -72037,7 +72122,10 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "owner": "Biosample", @@ -72061,7 +72149,7 @@ "value": "plate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "owner": "Biosample", "domain_of": [ @@ -72087,7 +72175,7 @@ "value": "B2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 11, "string_serialization": "{96 well plate pos}", "multivalued": false, @@ -72112,7 +72200,7 @@ "value": "Pond_MT_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "string_serialization": "{text < 20 characters}", "multivalued": false, @@ -72136,7 +72224,7 @@ "value": "phenol/chloroform extraction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "string_serialization": "{text}", "multivalued": false, @@ -72161,7 +72249,7 @@ "value": "John Jones" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "string_serialization": "{text}", "multivalued": false, @@ -72186,7 +72274,7 @@ "value": "187654" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{text}", "multivalued": false, @@ -72209,7 +72297,7 @@ "value": "Water" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 12, "owner": "Biosample", "domain_of": [ @@ -72230,7 +72318,7 @@ "value": "JGI_pond_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{text}", "multivalued": false, @@ -72257,7 +72345,7 @@ "value": "1191234" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -72282,7 +72370,7 @@ "value": "JGI Pond metatranscriptomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "string_serialization": "{text}", "multivalued": false, @@ -72307,7 +72395,7 @@ "value": "Jane Johnson" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "string_serialization": "{text}", "multivalued": false, @@ -72325,14 +72413,14 @@ "name": "rna_volume", "title": "RNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{float}", "owner": "Biosample", @@ -72344,7 +72432,7 @@ "range": "float", "required": true, "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "oxy_stat_samp": { @@ -72364,7 +72452,7 @@ "value": "no" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "alias": "dnase_rna", "owner": "JgiMtInterface", @@ -72388,7 +72476,7 @@ "value": "504000" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "string_serialization": "{text}", "multivalued": false, @@ -72415,8 +72503,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "alias": "rna_absorb1", "owner": "JgiMtInterface", @@ -72440,8 +72529,9 @@ "value": "2.02" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, + "is_a": "biomaterial_purity", "string_serialization": "{float}", "alias": "rna_absorb2", "owner": "JgiMtInterface", @@ -72464,7 +72554,10 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", + "see_also": [ + "nmdc:nucleic_acid_concentration" + ], "rank": 5, "string_serialization": "{float}", "alias": "rna_concentration", @@ -72489,7 +72582,7 @@ "value": "plate" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "alias": "rna_cont_type", "owner": "JgiMtInterface", @@ -72516,7 +72609,7 @@ "value": "B2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 11, "string_serialization": "{96 well plate pos}", "multivalued": false, @@ -72542,7 +72635,7 @@ "value": "Pond_MT_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "string_serialization": "{text < 20 characters}", "multivalued": false, @@ -72567,7 +72660,7 @@ "value": "phenol/chloroform extraction" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "string_serialization": "{text}", "multivalued": false, @@ -72593,7 +72686,7 @@ "value": "John Jones" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "string_serialization": "{text}", "multivalued": false, @@ -72619,7 +72712,7 @@ "value": "187654" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "string_serialization": "{text}", "multivalued": false, @@ -72643,7 +72736,7 @@ "value": "Water" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 12, "alias": "rna_sample_format", "owner": "JgiMtInterface", @@ -72665,7 +72758,7 @@ "value": "JGI_pond_041618" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "string_serialization": "{text}", "multivalued": false, @@ -72693,7 +72786,7 @@ "value": "1191234" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "string_serialization": "{text}", "multivalued": false, @@ -72719,7 +72812,7 @@ "value": "JGI Pond metatranscriptomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "string_serialization": "{text}", "multivalued": false, @@ -72745,7 +72838,7 @@ "value": "Jane Johnson" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "string_serialization": "{text}", "multivalued": false, @@ -72764,14 +72857,14 @@ "name": "rna_volume", "title": "RNA volume in ul", "comments": [ - "Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only." + "Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager" ], "examples": [ { "value": "25" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "string_serialization": "{float}", "alias": "rna_volume", @@ -72784,7 +72877,7 @@ "range": "float", "required": true, "recommended": true, - "minimum_value": 25, + "minimum_value": 0, "maximum_value": 1000 }, "analysis_type": { @@ -72796,7 +72889,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -72839,7 +72932,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -72890,7 +72983,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -73057,7 +73150,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -73095,7 +73188,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -73140,7 +73233,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -73185,7 +73278,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -73229,7 +73322,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -73272,7 +73365,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -73316,7 +73409,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -73368,7 +73461,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -73413,7 +73506,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -73458,7 +73551,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -73511,7 +73604,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -73556,7 +73649,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -73609,7 +73702,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -73653,7 +73746,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -73698,7 +73791,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -73741,7 +73834,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -73786,7 +73879,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -73829,7 +73922,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -73858,7 +73951,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -73895,7 +73988,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -73932,7 +74025,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -73969,7 +74062,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -74015,13 +74108,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -74047,7 +74141,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -74098,7 +74192,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -74137,7 +74231,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -74176,7 +74270,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -74218,7 +74312,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -74261,7 +74355,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -74272,6 +74366,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -74310,7 +74405,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -74346,7 +74441,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -74354,6 +74449,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -74392,7 +74488,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -74443,7 +74539,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -74489,7 +74585,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -74534,7 +74630,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -74577,7 +74673,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -74620,7 +74716,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -74664,7 +74760,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -74708,7 +74804,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -74739,7 +74835,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -74781,7 +74877,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -74827,7 +74923,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -74869,7 +74965,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -74913,7 +75009,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -74958,7 +75054,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -75002,7 +75098,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -75047,7 +75143,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -75092,7 +75188,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -75137,7 +75233,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -75183,7 +75279,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -75228,7 +75324,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -75280,7 +75376,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -75327,7 +75423,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -75372,7 +75468,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -75421,7 +75517,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -75464,7 +75560,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -75513,7 +75609,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -75548,7 +75644,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -75598,7 +75694,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -75630,7 +75726,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -75681,7 +75777,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -75726,7 +75822,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -75767,7 +75863,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -75818,7 +75914,7 @@ "value": "10 cubic meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water current" ], @@ -75861,7 +75957,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -75900,7 +75996,7 @@ "value": "100 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "altitude" ], @@ -75946,7 +76042,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -75992,7 +76088,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -76037,7 +76133,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -76081,7 +76177,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -76126,7 +76222,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -76179,7 +76275,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -76225,7 +76321,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -76271,7 +76367,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -76325,7 +76421,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -76371,7 +76467,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -76425,7 +76521,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -76470,7 +76566,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -76516,7 +76612,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -76560,7 +76656,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -76606,7 +76702,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -76650,7 +76746,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -76680,7 +76776,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -76718,7 +76814,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -76756,7 +76852,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -76794,7 +76890,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -76841,7 +76937,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -76849,6 +76945,7 @@ "alias": "elev", "owner": "MiscEnvsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -76874,7 +76971,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -76926,7 +77023,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -76966,7 +77063,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -77006,7 +77103,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -77049,7 +77146,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -77093,7 +77190,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -77105,6 +77202,7 @@ "alias": "geo_loc_name", "owner": "MiscEnvsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -77143,7 +77241,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -77180,7 +77278,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -77189,6 +77287,7 @@ "alias": "lat_lon", "owner": "MiscEnvsInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -77227,7 +77326,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -77279,7 +77378,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -77326,7 +77425,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -77372,7 +77471,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -77416,7 +77515,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -77460,7 +77559,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -77505,7 +77604,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -77550,7 +77649,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -77582,7 +77681,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -77625,7 +77724,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -77672,7 +77771,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -77715,7 +77814,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -77760,7 +77859,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -77806,7 +77905,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -77851,7 +77950,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -77897,7 +77996,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -77943,7 +78042,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -77989,7 +78088,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -78036,7 +78135,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -78082,7 +78181,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -78135,7 +78234,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -78183,7 +78282,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -78229,7 +78328,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -78279,7 +78378,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -78323,7 +78422,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -78373,7 +78472,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -78409,7 +78508,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -78460,7 +78559,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -78493,7 +78592,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -78545,7 +78644,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -78591,7 +78690,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -78633,7 +78732,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -78685,7 +78784,7 @@ "value": "10 cubic meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water current" ], @@ -78713,7 +78812,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -78757,7 +78856,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -78809,7 +78908,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -78963,7 +79062,7 @@ "value": "25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature regimen" ], @@ -79001,7 +79100,7 @@ "value": "A/3*B" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ancestral data" ], @@ -79042,7 +79141,7 @@ "value": "penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "antibiotic regimen" ], @@ -79078,7 +79177,7 @@ "value": "natural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biological status" ], @@ -79114,7 +79213,7 @@ "value": "sample inoculated with Rhizobium spp. Culture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biotic regimen" ], @@ -79155,7 +79254,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -79207,7 +79306,7 @@ "value": "nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical mutagen" ], @@ -79234,7 +79333,7 @@ "description says \"can include multiple climates\" but multivalued is set to false", "add examples, i need to see some examples to add correctly formatted example." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "is_a": "core field", "string_serialization": "{text};{Rn/start_time/end_time/duration}", @@ -79275,7 +79374,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -79324,7 +79423,7 @@ "value": "http://himedialabs.com/TD/PT158.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "culture rooting medium" ], @@ -79365,7 +79464,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -79404,7 +79503,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -79441,7 +79540,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -79478,7 +79577,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -79515,7 +79614,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -79561,13 +79660,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -79593,7 +79693,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -79644,7 +79744,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -79683,7 +79783,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -79722,7 +79822,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -79764,7 +79864,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -79815,7 +79915,7 @@ "value": "urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fertilizer regimen" ], @@ -79855,7 +79955,7 @@ "value": "bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fungicide regimen" ], @@ -79890,7 +79990,7 @@ "value": "nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 20, "is_a": "core field", "string_serialization": "{text};{float} {unit};{Rn/start_time/end_time/duration}", @@ -79925,7 +80025,7 @@ "value": "aox1A transgenic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "genetic modification" ], @@ -79958,7 +80058,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -79969,6 +80069,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -80011,7 +80112,7 @@ "value": "12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gravity" ], @@ -80050,7 +80151,7 @@ "value": "Growth chamber [CO_715:0000189]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth facility" ], @@ -80088,7 +80189,7 @@ "value": "spreading" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth habit" ], @@ -80127,7 +80228,7 @@ "value": "abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth hormone regimen" ], @@ -80167,7 +80268,7 @@ "value": "atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "herbicide regimen" ], @@ -80203,7 +80304,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -80254,7 +80355,7 @@ "value": "10 days" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host age" ], @@ -80291,7 +80392,7 @@ "value": "human" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host common name" ], @@ -80332,7 +80433,7 @@ "value": "500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host dry mass" ], @@ -80369,7 +80470,7 @@ "value": "C57BL/6" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host genotype" ], @@ -80410,7 +80511,7 @@ "value": "0.1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host height" ], @@ -80451,7 +80552,7 @@ "value": "1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host length" ], @@ -80488,7 +80589,7 @@ "value": "adult" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host life stage" ], @@ -80525,7 +80626,7 @@ "value": "elongated [PATO:0001154]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host phenotype" ], @@ -80563,7 +80664,7 @@ "value": "serovar:Newport, variety:glabrum, cultivar: Red Delicious" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subspecific genetic lineage" ], @@ -80600,7 +80701,7 @@ "value": "flukeworms" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed host symbionts" ], @@ -80635,7 +80736,7 @@ "comments": [ "Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host taxid" ], @@ -80675,7 +80776,7 @@ "value": "2500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host total mass" ], @@ -80716,7 +80817,7 @@ "value": "1500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host wet mass" ], @@ -80756,7 +80857,7 @@ "value": "25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity regimen" ], @@ -80783,7 +80884,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -80791,6 +80892,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -80833,7 +80935,7 @@ "value": "incandescant light;10 lux;450 nanometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light regimen" ], @@ -80872,7 +80974,7 @@ "value": "pruning;bark" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mechanical damage" ], @@ -80912,7 +81014,7 @@ "value": "potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mineral nutrient regimen" ], @@ -80948,7 +81050,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -80999,7 +81101,7 @@ "value": "carbon dioxide;10 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "non-mineral nutrient regimen" ], @@ -81039,7 +81141,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -81070,7 +81172,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -81112,7 +81214,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -81159,7 +81261,7 @@ "value": "pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pesticide regimen" ], @@ -81195,7 +81297,7 @@ "value": "7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH regimen" ], @@ -81231,7 +81333,7 @@ "value": "hydroponic plant culture media [EO:0007067]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant growth medium" ], @@ -81266,7 +81368,7 @@ "value": "xylem sap [PO:0025539]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant product" ], @@ -81302,7 +81404,7 @@ "value": "Hermaphroditic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant sex" ], @@ -81337,7 +81439,7 @@ "value": "epidermis [PO:0005679]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant structure" ], @@ -81378,7 +81480,7 @@ "value": "gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "radiation regimen" ], @@ -81418,7 +81520,7 @@ "value": "15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rainfall regimen" ], @@ -81454,7 +81556,7 @@ "value": "http://himedialabs.com/TD/PT158.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting conditions" ], @@ -81494,7 +81596,7 @@ "value": "sucrose" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium carbon" ], @@ -81535,7 +81637,7 @@ "value": "KH2PO4;170¬†milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium macronutrients" ], @@ -81576,7 +81678,7 @@ "value": "H3BO3;6.2¬†milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium micronutrients" ], @@ -81613,7 +81715,7 @@ "value": "7.5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium pH" ], @@ -81653,7 +81755,7 @@ "value": "abscisic acid;0.75 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium regulators" ], @@ -81690,7 +81792,7 @@ "value": "agar" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium solidifier" ], @@ -81730,7 +81832,7 @@ "value": "nicotinic acid;0.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium organic supplements" ], @@ -81771,7 +81873,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -81821,7 +81923,7 @@ "value": "NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salt regimen" ], @@ -81857,7 +81959,7 @@ "value": "farm sample" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample capture status" ], @@ -81892,7 +81994,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -81938,7 +82040,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -81984,7 +82086,7 @@ "value": "infection" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample disease stage" ], @@ -82019,7 +82121,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -82071,7 +82173,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -82118,7 +82220,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -82163,7 +82265,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -82212,7 +82314,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -82255,7 +82357,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -82300,7 +82402,7 @@ "value": "rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "seasonal environment" ], @@ -82332,7 +82434,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -82368,7 +82470,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -82415,7 +82517,7 @@ "value": "standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "standing water regimen" ], @@ -82451,7 +82553,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -82498,7 +82600,7 @@ "value": "https://link.springer.com/content/pdf/10.1007/BF02796489.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tissue culture growth media" ], @@ -82538,7 +82640,7 @@ "value": "15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water temperature regimen" ], @@ -82567,7 +82669,7 @@ "value": "75% water holding capacity; constant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "string_serialization": "{float} {unit};{Rn/start_time/end_time/duration}", @@ -82608,7 +82710,7 @@ "value": "25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature regimen" ], @@ -82647,7 +82749,7 @@ "value": "A/3*B" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ancestral data" ], @@ -82689,7 +82791,7 @@ "value": "penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "antibiotic regimen" ], @@ -82726,7 +82828,7 @@ "value": "natural" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biological status" ], @@ -82763,7 +82865,7 @@ "value": "sample inoculated with Rhizobium spp. Culture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biotic regimen" ], @@ -82805,7 +82907,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -82858,7 +82960,7 @@ "value": "nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical mutagen" ], @@ -82886,7 +82988,7 @@ "description says \"can include multiple climates\" but multivalued is set to false", "add examples, i need to see some examples to add correctly formatted example." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "is_a": "core field", "string_serialization": "{text};{Rn/start_time/end_time/duration}", @@ -82928,7 +83030,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -82978,7 +83080,7 @@ "value": "http://himedialabs.com/TD/PT158.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "culture rooting medium" ], @@ -83020,7 +83122,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -83060,7 +83162,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -83098,7 +83200,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -83136,7 +83238,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -83174,7 +83276,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -83221,7 +83323,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -83229,6 +83331,7 @@ "alias": "elev", "owner": "PlantAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -83254,7 +83357,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -83306,7 +83409,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -83346,7 +83449,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -83386,7 +83489,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -83429,7 +83532,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -83481,7 +83584,7 @@ "value": "urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fertilizer regimen" ], @@ -83522,7 +83625,7 @@ "value": "bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fungicide regimen" ], @@ -83558,7 +83661,7 @@ "value": "nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 20, "is_a": "core field", "string_serialization": "{text};{float} {unit};{Rn/start_time/end_time/duration}", @@ -83594,7 +83697,7 @@ "value": "aox1A transgenic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "genetic modification" ], @@ -83628,7 +83731,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -83640,6 +83743,7 @@ "alias": "geo_loc_name", "owner": "PlantAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -83682,7 +83786,7 @@ "value": "12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gravity" ], @@ -83722,7 +83826,7 @@ "value": "Growth chamber [CO_715:0000189]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth facility" ], @@ -83761,7 +83865,7 @@ "value": "spreading" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth habit" ], @@ -83801,7 +83905,7 @@ "value": "abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth hormone regimen" ], @@ -83842,7 +83946,7 @@ "value": "atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "herbicide regimen" ], @@ -83879,7 +83983,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -83931,7 +84035,7 @@ "value": "10 days" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host age" ], @@ -83969,7 +84073,7 @@ "value": "human" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host common name" ], @@ -84011,7 +84115,7 @@ "value": "500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host dry mass" ], @@ -84049,7 +84153,7 @@ "value": "C57BL/6" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host genotype" ], @@ -84091,7 +84195,7 @@ "value": "0.1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host height" ], @@ -84133,7 +84237,7 @@ "value": "1 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host length" ], @@ -84171,7 +84275,7 @@ "value": "adult" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host life stage" ], @@ -84209,7 +84313,7 @@ "value": "elongated [PATO:0001154]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host phenotype" ], @@ -84248,7 +84352,7 @@ "value": "serovar:Newport, variety:glabrum, cultivar: Red Delicious" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host subspecific genetic lineage" ], @@ -84286,7 +84390,7 @@ "value": "flukeworms" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed host symbionts" ], @@ -84322,7 +84426,7 @@ "comments": [ "Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host taxid" ], @@ -84363,7 +84467,7 @@ "value": "2500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host total mass" ], @@ -84405,7 +84509,7 @@ "value": "1500 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "host wet mass" ], @@ -84446,7 +84550,7 @@ "value": "25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity regimen" ], @@ -84474,7 +84578,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -84483,6 +84587,7 @@ "alias": "lat_lon", "owner": "PlantAssociatedInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -84525,7 +84630,7 @@ "value": "incandescant light;10 lux;450 nanometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light regimen" ], @@ -84565,7 +84670,7 @@ "value": "pruning;bark" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mechanical damage" ], @@ -84606,7 +84711,7 @@ "value": "potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mineral nutrient regimen" ], @@ -84643,7 +84748,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -84695,7 +84800,7 @@ "value": "carbon dioxide;10 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "non-mineral nutrient regimen" ], @@ -84736,7 +84841,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -84768,7 +84873,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -84811,7 +84916,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -84859,7 +84964,7 @@ "value": "pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pesticide regimen" ], @@ -84896,7 +85001,7 @@ "value": "7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH regimen" ], @@ -84933,7 +85038,7 @@ "value": "hydroponic plant culture media [EO:0007067]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant growth medium" ], @@ -84969,7 +85074,7 @@ "value": "xylem sap [PO:0025539]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant product" ], @@ -85006,7 +85111,7 @@ "value": "Hermaphroditic" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant sex" ], @@ -85042,7 +85147,7 @@ "value": "epidermis [PO:0005679]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "plant structure" ], @@ -85084,7 +85189,7 @@ "value": "gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "radiation regimen" ], @@ -85125,7 +85230,7 @@ "value": "15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rainfall regimen" ], @@ -85162,7 +85267,7 @@ "value": "http://himedialabs.com/TD/PT158.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting conditions" ], @@ -85203,7 +85308,7 @@ "value": "sucrose" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium carbon" ], @@ -85245,7 +85350,7 @@ "value": "KH2PO4;170¬†milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium macronutrients" ], @@ -85287,7 +85392,7 @@ "value": "H3BO3;6.2¬†milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium micronutrients" ], @@ -85325,7 +85430,7 @@ "value": "7.5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium pH" ], @@ -85366,7 +85471,7 @@ "value": "abscisic acid;0.75 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium regulators" ], @@ -85404,7 +85509,7 @@ "value": "agar" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium solidifier" ], @@ -85445,7 +85550,7 @@ "value": "nicotinic acid;0.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "rooting medium organic supplements" ], @@ -85487,7 +85592,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -85538,7 +85643,7 @@ "value": "NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salt regimen" ], @@ -85575,7 +85680,7 @@ "value": "farm sample" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample capture status" ], @@ -85611,7 +85716,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -85658,7 +85763,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -85705,7 +85810,7 @@ "value": "infection" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample disease stage" ], @@ -85741,7 +85846,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -85794,7 +85899,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -85842,7 +85947,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -85888,7 +85993,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -85938,7 +86043,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -85982,7 +86087,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -86028,7 +86133,7 @@ "value": "rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "seasonal environment" ], @@ -86061,7 +86166,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -86098,7 +86203,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -86146,7 +86251,7 @@ "value": "standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "standing water regimen" ], @@ -86183,7 +86288,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -86231,7 +86336,7 @@ "value": "https://link.springer.com/content/pdf/10.1007/BF02796489.pdf" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tissue culture growth media" ], @@ -86272,7 +86377,7 @@ "value": "15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water temperature regimen" ], @@ -86302,7 +86407,7 @@ "value": "75% water holding capacity; constant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "string_serialization": "{float} {unit};{Rn/start_time/end_time/duration}", @@ -86328,7 +86433,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -86373,7 +86478,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -86426,7 +86531,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -86578,7 +86683,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -86624,7 +86729,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -86666,7 +86771,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -86708,7 +86813,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -86753,7 +86858,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -86795,7 +86900,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -86839,7 +86944,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -86881,7 +86986,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -86924,7 +87029,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -86965,7 +87070,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -87007,7 +87112,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -87059,7 +87164,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -87104,7 +87209,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -87149,7 +87254,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -87202,7 +87307,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -87247,7 +87352,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -87300,7 +87405,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -87344,7 +87449,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -87389,7 +87494,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -87432,7 +87537,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -87477,7 +87582,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -87521,7 +87626,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -87564,7 +87669,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -87593,7 +87698,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -87630,7 +87735,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -87667,7 +87772,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -87704,7 +87809,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -87750,13 +87855,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -87782,7 +87888,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -87833,7 +87939,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -87872,7 +87978,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -87911,7 +88017,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -87953,7 +88059,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -87996,7 +88102,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -88007,6 +88113,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -88049,7 +88156,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -88087,7 +88194,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -88123,7 +88230,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -88131,6 +88238,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -88173,7 +88281,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -88216,7 +88324,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -88258,7 +88366,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -88300,7 +88408,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -88338,7 +88446,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -88389,7 +88497,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -88432,7 +88540,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -88478,7 +88586,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -88523,7 +88631,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -88566,7 +88674,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -88609,7 +88717,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -88653,7 +88761,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -88697,7 +88805,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -88728,7 +88836,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -88774,7 +88882,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -88816,7 +88924,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particle classification" ], @@ -88853,7 +88961,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -88900,7 +89008,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -88941,7 +89049,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -88983,7 +89091,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -89027,7 +89135,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -89070,7 +89178,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -89115,7 +89223,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -89159,7 +89267,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "porosity" ], @@ -89200,7 +89308,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -89245,7 +89353,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -89290,7 +89398,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -89332,7 +89440,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -89377,7 +89485,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -89423,7 +89531,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -89468,7 +89576,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -89520,7 +89628,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -89567,7 +89675,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -89612,7 +89720,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -89661,7 +89769,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -89704,7 +89812,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -89749,7 +89857,7 @@ "value": "biogenous" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sediment type" ], @@ -89788,7 +89896,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -89823,7 +89931,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -89873,7 +89981,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -89905,7 +90013,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -89956,7 +90064,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -90001,7 +90109,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -90042,7 +90150,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -90089,7 +90197,7 @@ "value": "high tide" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tidal stage" ], @@ -90121,7 +90229,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -90160,7 +90268,7 @@ "value": "500 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total depth of water column" ], @@ -90187,7 +90295,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -90216,7 +90324,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -90255,7 +90363,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -90318,7 +90426,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -90360,7 +90468,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -90407,7 +90515,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -90450,7 +90558,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -90493,7 +90601,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -90539,7 +90647,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -90582,7 +90690,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -90627,7 +90735,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -90670,7 +90778,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -90714,7 +90822,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -90756,7 +90864,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -90799,7 +90907,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -90852,7 +90960,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -90898,7 +91006,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -90944,7 +91052,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -90998,7 +91106,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -91044,7 +91152,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -91098,7 +91206,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -91143,7 +91251,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -91189,7 +91297,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -91233,7 +91341,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -91279,7 +91387,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -91324,7 +91432,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -91368,7 +91476,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -91398,7 +91506,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -91436,7 +91544,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -91474,7 +91582,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -91512,7 +91620,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -91559,7 +91667,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -91567,6 +91675,7 @@ "alias": "elev", "owner": "SedimentInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -91592,7 +91701,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -91644,7 +91753,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -91684,7 +91793,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -91724,7 +91833,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -91767,7 +91876,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -91811,7 +91920,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -91823,6 +91932,7 @@ "alias": "geo_loc_name", "owner": "SedimentInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -91865,7 +91975,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -91904,7 +92014,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -91941,7 +92051,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -91950,6 +92060,7 @@ "alias": "lat_lon", "owner": "SedimentInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -91992,7 +92103,7 @@ "value": "52.8 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "magnesium" ], @@ -92036,7 +92147,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -92079,7 +92190,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -92122,7 +92233,7 @@ "value": "1800 parts per billion" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "methane" ], @@ -92161,7 +92272,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -92213,7 +92324,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -92257,7 +92368,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -92304,7 +92415,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -92350,7 +92461,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -92394,7 +92505,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -92438,7 +92549,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -92483,7 +92594,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -92528,7 +92639,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -92560,7 +92671,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -92607,7 +92718,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -92650,7 +92761,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particle classification" ], @@ -92688,7 +92799,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -92736,7 +92847,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -92778,7 +92889,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -92821,7 +92932,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -92866,7 +92977,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -92910,7 +93021,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -92956,7 +93067,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -93001,7 +93112,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "porosity" ], @@ -93043,7 +93154,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -93089,7 +93200,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -93135,7 +93246,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -93178,7 +93289,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -93224,7 +93335,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -93271,7 +93382,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -93317,7 +93428,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -93370,7 +93481,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -93418,7 +93529,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -93464,7 +93575,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -93514,7 +93625,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -93558,7 +93669,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -93604,7 +93715,7 @@ "value": "biogenous" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sediment type" ], @@ -93644,7 +93755,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -93680,7 +93791,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -93731,7 +93842,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -93764,7 +93875,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -93816,7 +93927,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -93862,7 +93973,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -93904,7 +94015,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -93952,7 +94063,7 @@ "value": "high tide" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tidal stage" ], @@ -93985,7 +94096,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -94025,7 +94136,7 @@ "value": "500 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total depth of water column" ], @@ -94053,7 +94164,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -94083,7 +94194,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -94123,7 +94234,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -94187,7 +94298,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -94214,7 +94325,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -94260,7 +94371,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -94314,7 +94425,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -94497,7 +94608,7 @@ "value": "roundup;5 milligram per liter;2018-06-21" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/agrochemical additions" ], @@ -94538,7 +94649,7 @@ "value": "25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature regimen" ], @@ -94577,7 +94688,7 @@ "value": "0.27" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "is_a": "core field", "slot_uri": "MIXS:0000607", @@ -94609,7 +94720,7 @@ "value": "https://doi.org/10.1371/journal.pone.0176357" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -94646,7 +94757,7 @@ "value": "2.3 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -94679,7 +94790,7 @@ "value": "8.94 inch" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "core field", "slot_uri": "MIXS:0000644", @@ -94716,7 +94827,7 @@ "value": "12.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean annual temperature" ], @@ -94752,7 +94863,7 @@ "value": "sample inoculated with Rhizobium spp. Culture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biotic regimen" ], @@ -94786,7 +94897,7 @@ "value": "free living" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed biotic relationship" ], @@ -94821,7 +94932,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -94863,7 +94974,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -94902,7 +95013,7 @@ "description says \"can include multiple climates\" but multivalued is set to false", "add examples, i need to see some examples to add correctly formatted example." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "is_a": "core field", "string_serialization": "{text};{Rn/start_time/end_time/duration}", @@ -94943,7 +95054,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -94988,7 +95099,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -95021,7 +95132,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -95054,7 +95165,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -95091,7 +95202,7 @@ "value": "yes;R2/2017-01-01/2018-12-31/P6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/crop rotation" ], @@ -95127,7 +95238,7 @@ "value": "conifers" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "current land use" ], @@ -95168,7 +95279,7 @@ "value": "Bauhinia variegata" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "is_a": "core field", "string_serialization": "{text}", @@ -95176,6 +95287,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -95200,7 +95312,7 @@ "value": "https://doi.org/10.1111/j.1654-109X.2011.01154.x" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -95238,7 +95350,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -95287,7 +95399,7 @@ "value": "well" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "drainage classification" ], @@ -95312,7 +95424,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -95348,7 +95460,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -95384,7 +95496,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -95420,7 +95532,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -95465,13 +95577,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -95497,7 +95610,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -95548,7 +95661,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -95587,7 +95700,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -95626,7 +95739,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -95668,7 +95781,7 @@ "value": "time series design [EFO:0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -95710,7 +95823,7 @@ "value": "experimental treatment: value" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:experimental_factor|additional_info" ], @@ -95746,7 +95859,7 @@ "value": "1980-05-18, volcanic eruption" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "is_a": "core field", "slot_uri": "MIXS:0000320", @@ -95778,7 +95891,7 @@ "value": "Luvisols" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/FAO classification" ], @@ -95809,7 +95922,7 @@ "value": "Basix PES, 13-100-106 FisherSci" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:filter_type" ], @@ -95853,7 +95966,7 @@ "value": "1871-10-01 to 1871-10-31" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 15, "is_a": "core field", "slot_uri": "MIXS:0001086", @@ -95896,7 +96009,7 @@ "value": "1927-04 to 1927-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "is_a": "core field", "slot_uri": "MIXS:0000319", @@ -95927,7 +96040,7 @@ "value": "nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 20, "is_a": "core field", "string_serialization": "{text};{float} {unit};{Rn/start_time/end_time/duration}", @@ -95958,7 +96071,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -95969,6 +96082,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -96010,7 +96124,7 @@ "value": "Growth chamber [CO_715:0000189]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth facility" ], @@ -96056,7 +96170,7 @@ "value": "mercury 0.09 ug/g; chromium 0.03 ug/g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "is_a": "core field", "string_serialization": "{text};{float} {unit}", @@ -96091,7 +96205,7 @@ "value": "mercury https://doi.org/10.1007/BF01056090; chromium https://doi.org/10.1007/s00216-006-0322-8" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -96124,7 +96238,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -96175,7 +96289,7 @@ "value": "25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity regimen" ], @@ -96212,7 +96326,7 @@ "value": "H218O" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:chem_administration" ], @@ -96238,7 +96352,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -96246,6 +96360,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -96291,7 +96406,7 @@ "value": "543 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0", "https://secure.caes.uga.edu/extension/publications/files/pdf/C%20874_5.PDF" @@ -96339,7 +96454,7 @@ "value": "1575 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -96382,7 +96497,7 @@ "value": "incandescant light;10 lux;450 nanometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light regimen" ], @@ -96421,7 +96536,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "link to classification information" ], @@ -96457,7 +96572,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "link to climate information" ], @@ -96493,7 +96608,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/local classification" ], @@ -96504,6 +96619,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -96529,7 +96645,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/local classification method" ], @@ -96569,7 +96685,7 @@ "value": "24.7 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -96606,7 +96722,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -96642,7 +96758,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "microbial biomass method" ], @@ -96674,7 +96790,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -96713,7 +96829,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "microbial biomass" ], @@ -96742,7 +96858,7 @@ "value": "0.05 ug C/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -96771,7 +96887,7 @@ "value": "0.05 ug N/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -96807,7 +96923,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -96861,7 +96977,7 @@ "value": "0.29 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -96904,7 +97020,7 @@ "value": "1.2 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -96933,7 +97049,7 @@ "value": "insect 0.23 ug; plant 1g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:biomass|microbial_biomass" ], @@ -96962,7 +97078,7 @@ "value": "https://doi.org/10.1038/s41467-021-26181-3" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -97001,7 +97117,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -97045,7 +97161,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -97078,7 +97194,7 @@ "value": "https://doi.org/10.1016/0038-0717(85)90144-0" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:org_nitro|tot_nitro_cont_meth" ], @@ -97101,7 +97217,7 @@ "comments": [ "This is an open text field to provide any treatments that cannot be captured in the provided slots." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:additional_info" ], @@ -97122,7 +97238,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -97167,7 +97283,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -97209,7 +97325,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -97253,7 +97369,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -97294,7 +97410,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/previous land use method" ], @@ -97330,7 +97446,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/previous land use" ], @@ -97367,7 +97483,7 @@ "value": "summit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "profile position" ], @@ -97406,7 +97522,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -97442,7 +97558,7 @@ "value": "https://doi.org/10.1007/978-1-61779-986-0_28" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 55, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -97474,7 +97590,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -97520,7 +97636,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -97565,7 +97681,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -97617,7 +97733,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -97668,7 +97784,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -97711,7 +97827,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -97762,7 +97878,7 @@ "value": "10.16 mm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 29, "is_a": "core field", "slot_uri": "MIXS:0000645", @@ -97799,7 +97915,7 @@ "value": "18 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean seasonal temperature" ], @@ -97848,7 +97964,7 @@ "value": "2 mm sieved" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "core field", "string_serialization": "{{text}|{float} {unit}};{float} {unit}", @@ -97886,7 +98002,7 @@ "value": "0.2 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction lower threshold" ], @@ -97928,7 +98044,7 @@ "value": "20 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction upper threshold" ], @@ -97963,7 +98079,7 @@ "value": "35" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "is_a": "core field", "slot_uri": "MIXS:0000647", @@ -97996,7 +98112,7 @@ "value": "0.1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 31, "is_a": "core field", "slot_uri": "MIXS:0000646", @@ -98029,7 +98145,7 @@ "value": "A horizon" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon" ], @@ -98064,7 +98180,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil texture measurement" ], @@ -98100,7 +98216,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil texture method" ], @@ -98136,7 +98252,7 @@ "value": "plinthosol [ENVO:00002250]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil type" ], @@ -98147,6 +98263,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -98173,7 +98290,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil type method" ], @@ -98199,7 +98316,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -98241,7 +98358,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -98274,7 +98391,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -98311,7 +98428,7 @@ "value": "-20 degree Celsius freezer;P2Y10D" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "storage conditions" ], @@ -98348,7 +98465,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -98395,7 +98512,7 @@ "value": "chisel" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/tillage" ], @@ -98426,7 +98543,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -98454,7 +98571,7 @@ "value": "https://acsess.onlinelibrary.wiley.com/doi/full/10.2136/sssaj2009.0389?casa_token=bm0pYIUdNMgAAAAA%3AOWVRR0STHaOe-afTcTdxn5m1hM8n2ltM0wY-b1iYpYdD9dhwppk5j3LvC2IO5yhOIvyLVeQz4NZRCZo" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 49, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -98477,7 +98594,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -98502,7 +98619,7 @@ "value": "https://doi.org/10.1080/07352680902776556" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 51, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -98529,7 +98646,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -98568,7 +98685,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -98610,7 +98727,7 @@ "value": "https://dec.alaska.gov/applications/spar/webcalc/definitions.htm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 40, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -98668,7 +98785,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -98697,7 +98814,7 @@ "value": "75% water holding capacity; constant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "string_serialization": "{float} {unit};{Rn/start_time/end_time/duration}", @@ -98736,7 +98853,7 @@ "value": "2.5 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -98786,7 +98903,7 @@ "value": "roundup;5 milligram per liter;2018-06-21" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/agrochemical additions" ], @@ -98828,7 +98945,7 @@ "value": "25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "air temperature regimen" ], @@ -98868,7 +98985,7 @@ "value": "0.27" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 3, "is_a": "core field", "slot_uri": "MIXS:0000607", @@ -98901,7 +99018,7 @@ "value": "https://doi.org/10.1371/journal.pone.0176357" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 4, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -98939,7 +99056,7 @@ "value": "2.3 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -98973,7 +99090,7 @@ "value": "8.94 inch" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "core field", "slot_uri": "MIXS:0000644", @@ -99011,7 +99128,7 @@ "value": "12.5 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean annual temperature" ], @@ -99048,7 +99165,7 @@ "value": "sample inoculated with Rhizobium spp. Culture" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biotic regimen" ], @@ -99083,7 +99200,7 @@ "value": "free living" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "observed biotic relationship" ], @@ -99119,7 +99236,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -99162,7 +99279,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -99202,7 +99319,7 @@ "description says \"can include multiple climates\" but multivalued is set to false", "add examples, i need to see some examples to add correctly formatted example." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 19, "is_a": "core field", "string_serialization": "{text};{Rn/start_time/end_time/duration}", @@ -99244,7 +99361,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -99290,7 +99407,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -99324,7 +99441,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -99358,7 +99475,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -99396,7 +99513,7 @@ "value": "yes;R2/2017-01-01/2018-12-31/P6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/crop rotation" ], @@ -99433,7 +99550,7 @@ "value": "conifers" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "current land use" ], @@ -99475,7 +99592,7 @@ "value": "Bauhinia variegata" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 9, "is_a": "core field", "string_serialization": "{text}", @@ -99484,6 +99601,7 @@ "alias": "cur_vegetation", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -99508,7 +99626,7 @@ "value": "https://doi.org/10.1111/j.1654-109X.2011.01154.x" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 10, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -99547,7 +99665,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -99597,7 +99715,7 @@ "value": "well" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "drainage classification" ], @@ -99623,7 +99741,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -99660,7 +99778,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -99697,7 +99815,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -99734,7 +99852,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -99780,7 +99898,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -99788,6 +99906,7 @@ "alias": "elev", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -99813,7 +99932,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -99865,7 +99984,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -99905,7 +100024,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -99945,7 +100064,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -99988,7 +100107,7 @@ "value": "time series design [EFO:0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -100031,7 +100150,7 @@ "value": "experimental treatment: value" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:experimental_factor|additional_info" ], @@ -100068,7 +100187,7 @@ "value": "1980-05-18, volcanic eruption" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 13, "is_a": "core field", "slot_uri": "MIXS:0000320", @@ -100101,7 +100220,7 @@ "value": "Luvisols" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/FAO classification" ], @@ -100133,7 +100252,7 @@ "value": "Basix PES, 13-100-106 FisherSci" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:filter_type" ], @@ -100178,7 +100297,7 @@ "value": "1871-10-01 to 1871-10-31" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 15, "is_a": "core field", "slot_uri": "MIXS:0001086", @@ -100222,7 +100341,7 @@ "value": "1927-04 to 1927-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 16, "is_a": "core field", "slot_uri": "MIXS:0000319", @@ -100254,7 +100373,7 @@ "value": "nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 20, "is_a": "core field", "string_serialization": "{text};{float} {unit};{Rn/start_time/end_time/duration}", @@ -100286,7 +100405,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -100298,6 +100417,7 @@ "alias": "geo_loc_name", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -100339,7 +100459,7 @@ "value": "Growth chamber [CO_715:0000189]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "growth facility" ], @@ -100386,7 +100506,7 @@ "value": "mercury 0.09 ug/g; chromium 0.03 ug/g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 17, "is_a": "core field", "string_serialization": "{text};{float} {unit}", @@ -100422,7 +100542,7 @@ "value": "mercury https://doi.org/10.1007/BF01056090; chromium https://doi.org/10.1007/s00216-006-0322-8" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 18, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -100456,7 +100576,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -100508,7 +100628,7 @@ "value": "25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "humidity regimen" ], @@ -100546,7 +100666,7 @@ "value": "H218O" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:chem_administration" ], @@ -100573,7 +100693,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -100582,6 +100702,7 @@ "alias": "lat_lon", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -100627,7 +100748,7 @@ "value": "543 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0", "https://secure.caes.uga.edu/extension/publications/files/pdf/C%20874_5.PDF" @@ -100676,7 +100797,7 @@ "value": "1575 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -100720,7 +100841,7 @@ "value": "incandescant light;10 lux;450 nanometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light regimen" ], @@ -100760,7 +100881,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "link to classification information" ], @@ -100797,7 +100918,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "link to climate information" ], @@ -100834,7 +100955,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/local classification" ], @@ -100846,6 +100967,7 @@ "alias": "local_class", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -100871,7 +100993,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil_taxonomic/local classification method" ], @@ -100912,7 +101034,7 @@ "value": "24.7 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -100950,7 +101072,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -100987,7 +101109,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "microbial biomass method" ], @@ -101020,7 +101142,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -101060,7 +101182,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "microbial biomass" ], @@ -101090,7 +101212,7 @@ "value": "0.05 ug C/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -101120,7 +101242,7 @@ "value": "0.05 ug N/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -101157,7 +101279,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -101212,7 +101334,7 @@ "value": "0.29 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -101256,7 +101378,7 @@ "value": "1.2 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -101286,7 +101408,7 @@ "value": "insect 0.23 ug; plant 1g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:biomass|microbial_biomass" ], @@ -101316,7 +101438,7 @@ "value": "https://doi.org/10.1038/s41467-021-26181-3" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -101356,7 +101478,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -101401,7 +101523,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -101435,7 +101557,7 @@ "value": "https://doi.org/10.1016/0038-0717(85)90144-0" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:org_nitro|tot_nitro_cont_meth" ], @@ -101459,7 +101581,7 @@ "comments": [ "This is an open text field to provide any treatments that cannot be captured in the provided slots." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:additional_info" ], @@ -101481,7 +101603,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -101527,7 +101649,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -101570,7 +101692,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -101615,7 +101737,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -101657,7 +101779,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/previous land use method" ], @@ -101694,7 +101816,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/previous land use" ], @@ -101732,7 +101854,7 @@ "value": "summit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "profile position" ], @@ -101772,7 +101894,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -101809,7 +101931,7 @@ "value": "https://doi.org/10.1007/978-1-61779-986-0_28" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 55, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -101842,7 +101964,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -101889,7 +102011,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -101935,7 +102057,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -101988,7 +102110,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -102040,7 +102162,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -102084,7 +102206,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -102136,7 +102258,7 @@ "value": "10.16 mm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 29, "is_a": "core field", "slot_uri": "MIXS:0000645", @@ -102174,7 +102296,7 @@ "value": "18 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean seasonal temperature" ], @@ -102224,7 +102346,7 @@ "value": "2 mm sieved" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "core field", "string_serialization": "{{text}|{float} {unit}};{float} {unit}", @@ -102263,7 +102385,7 @@ "value": "0.2 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction lower threshold" ], @@ -102306,7 +102428,7 @@ "value": "20 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction upper threshold" ], @@ -102342,7 +102464,7 @@ "value": "35" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 1, "is_a": "core field", "slot_uri": "MIXS:0000647", @@ -102376,7 +102498,7 @@ "value": "0.1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 31, "is_a": "core field", "slot_uri": "MIXS:0000646", @@ -102410,7 +102532,7 @@ "value": "A horizon" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon" ], @@ -102446,7 +102568,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil texture measurement" ], @@ -102483,7 +102605,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil texture method" ], @@ -102520,7 +102642,7 @@ "value": "plinthosol [ENVO:00002250]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil type" ], @@ -102532,6 +102654,7 @@ "alias": "soil_type", "owner": "SoilInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "SoilInterface" ], @@ -102558,7 +102681,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil type method" ], @@ -102585,7 +102708,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -102628,7 +102751,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -102662,7 +102785,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -102700,7 +102823,7 @@ "value": "-20 degree Celsius freezer;P2Y10D" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "storage conditions" ], @@ -102738,7 +102861,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -102786,7 +102909,7 @@ "value": "chisel" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "history/tillage" ], @@ -102818,7 +102941,7 @@ "value": "1 ug/L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 47, "is_a": "core field", "slot_uri": "MIXS:0000525", @@ -102847,7 +102970,7 @@ "value": "https://acsess.onlinelibrary.wiley.com/doi/full/10.2136/sssaj2009.0389?casa_token=bm0pYIUdNMgAAAAA%3AOWVRR0STHaOe-afTcTdxn5m1hM8n2ltM0wY-b1iYpYdD9dhwppk5j3LvC2IO5yhOIvyLVeQz4NZRCZo" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 49, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -102871,7 +102994,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 48, "is_a": "core field", "slot_uri": "MIXS:0000530", @@ -102897,7 +103020,7 @@ "value": "https://doi.org/10.1080/07352680902776556" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 51, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -102925,7 +103048,7 @@ "value": "5 mg N/ L" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 50, "is_a": "core field", "slot_uri": "MIXS:0000533", @@ -102965,7 +103088,7 @@ "value": "0.03 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphorus" ], @@ -103008,7 +103131,7 @@ "value": "https://dec.alaska.gov/applications/spar/webcalc/definitions.htm" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 40, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -103067,7 +103190,7 @@ "value": "10% water filled pore space" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 39, "is_a": "core field", "string_serialization": "{float or pct} {unit}", @@ -103097,7 +103220,7 @@ "value": "75% water holding capacity; constant" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "string_serialization": "{float} {unit};{Rn/start_time/end_time/duration}", @@ -103137,7 +103260,7 @@ "value": "2.5 mg/kg" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://www.ornl.gov/content/bio-scales-0" ], @@ -103166,7 +103289,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -103213,7 +103336,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -103268,7 +103391,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -103393,7 +103516,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -103439,7 +103562,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biochemical oxygen demand" ], @@ -103478,7 +103601,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -103530,7 +103653,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical oxygen demand" ], @@ -103572,7 +103695,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -103626,7 +103749,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -103665,7 +103788,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -103702,7 +103825,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -103739,7 +103862,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -103776,7 +103899,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -103827,7 +103950,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "efficiency percent" ], @@ -103862,13 +103985,14 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -103910,7 +104034,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "emulsions" ], @@ -103935,7 +104059,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -103986,7 +104110,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -104025,7 +104149,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -104064,7 +104188,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -104106,7 +104230,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -104157,7 +104281,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gaseous substances" ], @@ -104190,7 +104314,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -104201,6 +104325,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -104239,7 +104364,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -104290,7 +104415,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "industrial effluent percent" ], @@ -104330,7 +104455,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "inorganic particles" ], @@ -104356,7 +104481,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -104364,6 +104489,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -104402,7 +104528,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -104453,7 +104579,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -104499,7 +104625,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic particles" ], @@ -104540,7 +104666,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -104571,7 +104697,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -104613,7 +104739,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -104659,7 +104785,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -104701,7 +104827,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -104745,7 +104871,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -104786,7 +104912,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pre-treatment" ], @@ -104822,7 +104948,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "primary treatment" ], @@ -104858,7 +104984,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reactor type" ], @@ -104898,7 +105024,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -104943,7 +105069,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -104989,7 +105115,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -105034,7 +105160,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -105086,7 +105212,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -105133,7 +105259,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -105178,7 +105304,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -105227,7 +105353,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -105270,7 +105396,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -105315,7 +105441,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "secondary treatment" ], @@ -105351,7 +105477,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sewage type" ], @@ -105383,7 +105509,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -105433,7 +105559,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sludge retention time" ], @@ -105473,7 +105599,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -105519,7 +105645,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble inorganic material" ], @@ -105560,7 +105686,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble organic material" ], @@ -105587,7 +105713,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -105638,7 +105764,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -105677,7 +105803,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -105724,7 +105850,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tertiary treatment" ], @@ -105764,7 +105890,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -105807,7 +105933,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphate" ], @@ -105843,7 +105969,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wastewater type" ], @@ -105885,7 +106011,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -105932,7 +106058,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biochemical oxygen demand" ], @@ -105972,7 +106098,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -106025,7 +106151,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical oxygen demand" ], @@ -106068,7 +106194,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -106123,7 +106249,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -106163,7 +106289,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -106201,7 +106327,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -106239,7 +106365,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -106277,7 +106403,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -106329,7 +106455,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "efficiency percent" ], @@ -106365,7 +106491,7 @@ "value": "1250" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -106373,6 +106499,7 @@ "alias": "elev", "owner": "WastewaterSludgeInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -106414,7 +106541,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "emulsions" ], @@ -106440,7 +106567,7 @@ "notes": [ "range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -106492,7 +106619,7 @@ "value": "shrub layer [ENVO:01000336]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -106532,7 +106659,7 @@ "value": "soil [ENVO:00001998]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -106572,7 +106699,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -106615,7 +106742,7 @@ "value": "time series design [EFO:EFO_0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -106667,7 +106794,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "gaseous substances" ], @@ -106701,7 +106828,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -106713,6 +106840,7 @@ "alias": "geo_loc_name", "owner": "WastewaterSludgeInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -106751,7 +106879,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -106803,7 +106931,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "industrial effluent percent" ], @@ -106844,7 +106972,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "inorganic particles" ], @@ -106871,7 +106999,7 @@ "required where?", "This is currently a required field but it's not clear if this should be required for human hosts" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{lat lon}", @@ -106880,6 +107008,7 @@ "alias": "lat_lon", "owner": "WastewaterSludgeInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -106918,7 +107047,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -106970,7 +107099,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -107017,7 +107146,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic particles" ], @@ -107059,7 +107188,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -107091,7 +107220,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -107134,7 +107263,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -107181,7 +107310,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -107224,7 +107353,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -107269,7 +107398,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -107311,7 +107440,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pre-treatment" ], @@ -107348,7 +107477,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "primary treatment" ], @@ -107385,7 +107514,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "reactor type" ], @@ -107426,7 +107555,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -107472,7 +107601,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -107519,7 +107648,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -107565,7 +107694,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -107618,7 +107747,7 @@ "value": "10 mL" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -107666,7 +107795,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -107712,7 +107841,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -107762,7 +107891,7 @@ "value": "-80 Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -107806,7 +107935,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -107852,7 +107981,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "secondary treatment" ], @@ -107889,7 +108018,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sewage type" ], @@ -107922,7 +108051,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -107973,7 +108102,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sludge retention time" ], @@ -108014,7 +108143,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -108061,7 +108190,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble inorganic material" ], @@ -108103,7 +108232,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble organic material" ], @@ -108131,7 +108260,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -108183,7 +108312,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended solids" ], @@ -108223,7 +108352,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -108271,7 +108400,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tertiary treatment" ], @@ -108312,7 +108441,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -108356,7 +108485,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total phosphate" ], @@ -108393,7 +108522,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "wastewater type" ], @@ -108420,7 +108549,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -108468,7 +108597,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -108524,7 +108653,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -108692,7 +108821,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -108734,7 +108863,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -108776,7 +108905,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -108818,7 +108947,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -108860,7 +108989,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -108901,7 +109030,7 @@ "value": "wind speed;9 knots" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "atmospheric data" ], @@ -108942,7 +109071,7 @@ "value": "5 milligram per cubic meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial production" ], @@ -108982,7 +109111,7 @@ "value": "300 micromole oxygen per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial respiration" ], @@ -109022,7 +109151,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -109064,7 +109193,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -109108,7 +109237,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -109150,7 +109279,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -109193,7 +109322,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -109234,7 +109363,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -109276,7 +109405,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -109328,7 +109457,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -109373,7 +109502,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -109418,7 +109547,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -109471,7 +109600,7 @@ "value": "10 milliSiemens per centimeter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "conductivity" ], @@ -109511,7 +109640,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -109556,7 +109685,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -109609,7 +109738,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -109653,7 +109782,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -109698,7 +109827,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -109741,7 +109870,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -109786,7 +109915,7 @@ "value": "761 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic nitrogen" ], @@ -109826,7 +109955,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -109868,7 +109997,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -109912,7 +110041,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -109955,7 +110084,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -109998,7 +110127,7 @@ "value": "28.71 microEinstein per square meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "downward PAR" ], @@ -110021,7 +110150,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -110055,7 +110184,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -110089,7 +110218,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -110123,7 +110252,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -110163,13 +110292,14 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -110191,7 +110321,7 @@ "name": "env_broad_scale", "description": "Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS", "title": "broad-scale environmental context", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -110222,7 +110352,7 @@ "name": "env_local_scale", "description": "Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.", "title": "local environmental context", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -110253,7 +110383,7 @@ "name": "env_medium", "description": "Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).", "title": "environmental medium", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -110292,7 +110422,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -110334,7 +110464,7 @@ "value": "time series design [EFO:0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -110385,7 +110515,7 @@ "value": "2.5 volts" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fluorescence" ], @@ -110417,7 +110547,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -110428,6 +110558,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -110469,7 +110600,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -110507,7 +110638,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -110542,7 +110673,7 @@ "notes": [ "required where?" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{float} {float}", @@ -110550,6 +110681,7 @@ "multivalued": false, "owner": "Biosample", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -110591,7 +110723,7 @@ "value": "0.3 lux" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light intensity" ], @@ -110631,7 +110763,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -110673,7 +110805,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -110711,7 +110843,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -110762,7 +110894,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -110805,7 +110937,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -110851,7 +110983,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -110896,7 +111028,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -110939,7 +111071,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -110982,7 +111114,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -111026,7 +111158,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -111070,7 +111202,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -111101,7 +111233,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -111147,7 +111279,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -111189,7 +111321,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic nitrogen" ], @@ -111225,7 +111357,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -111272,7 +111404,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -111310,7 +111442,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -111348,7 +111480,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -111392,7 +111524,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -111435,7 +111567,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -111480,7 +111612,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -111524,7 +111656,7 @@ "value": "3.926 micromole photons per second per square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "photon flux" ], @@ -111564,7 +111696,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -111609,7 +111741,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -111654,7 +111786,7 @@ "value": "100 milligram per cubic meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "primary production" ], @@ -111694,7 +111826,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -111736,7 +111868,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -111778,7 +111910,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -111820,7 +111952,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -111865,7 +111997,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -111911,7 +112043,7 @@ "value": "5 liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -111957,7 +112089,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -112002,7 +112134,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -112051,7 +112183,7 @@ "value": "-80 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -112093,7 +112225,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -112142,7 +112274,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -112177,7 +112309,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -112227,7 +112359,7 @@ "value": "0.2 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction lower threshold" ], @@ -112268,7 +112400,7 @@ "value": "20 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction upper threshold" ], @@ -112309,7 +112441,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -112355,7 +112487,7 @@ "value": "0.1 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble reactive phosphorus" ], @@ -112378,7 +112510,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -112429,7 +112561,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -112474,7 +112606,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -112519,7 +112651,7 @@ "value": "0.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended particulate matter" ], @@ -112555,7 +112687,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -112602,7 +112734,7 @@ "value": "high tide" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tidal stage" ], @@ -112642,7 +112774,7 @@ "value": "500 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total depth of water column" ], @@ -112683,7 +112815,7 @@ "value": "40 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total dissolved nitrogen" ], @@ -112723,7 +112855,7 @@ "value": "40 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total inorganic nitrogen" ], @@ -112763,7 +112895,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -112806,7 +112938,7 @@ "value": "35 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total particulate carbon" ], @@ -112846,7 +112978,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -112888,7 +113020,7 @@ "value": "10 cubic meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water current" ], @@ -112931,7 +113063,7 @@ "value": "50 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity" ], @@ -112974,7 +113106,7 @@ "value": "titration" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkalinity method" ], @@ -113017,7 +113149,7 @@ "value": "0.005 mole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "alkyl diethers" ], @@ -113060,7 +113192,7 @@ "value": "0.269 mole per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "aminopeptidase activity" ], @@ -113103,7 +113235,7 @@ "value": "1.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "ammonium" ], @@ -113145,7 +113277,7 @@ "value": "wind speed;9 knots" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "atmospheric data" ], @@ -113187,7 +113319,7 @@ "value": "5 milligram per cubic meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial production" ], @@ -113228,7 +113360,7 @@ "value": "300 micromole oxygen per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial respiration" ], @@ -113269,7 +113401,7 @@ "value": "2.53 microgram per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bacterial carbon production" ], @@ -113312,7 +113444,7 @@ "value": "total;20 gram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "biomass" ], @@ -113357,7 +113489,7 @@ "value": "14 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bishomohopanol" ], @@ -113400,7 +113532,7 @@ "value": "0.05 parts per million" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "bromide" ], @@ -113444,7 +113576,7 @@ "value": "0.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "calcium" ], @@ -113486,7 +113618,7 @@ "value": "0.417361111" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "carbon/nitrogen ratio" ], @@ -113529,7 +113661,7 @@ "value": "agar [CHEBI:2509];2018-05" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chemical administration" ], @@ -113582,7 +113714,7 @@ "value": "5000 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chloride" ], @@ -113628,7 +113760,7 @@ "value": "5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "chlorophyll" ], @@ -113674,7 +113806,7 @@ "value": "2021" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "collection date" ], @@ -113728,7 +113860,7 @@ "value": "10 milliSiemens per centimeter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "conductivity" ], @@ -113769,7 +113901,7 @@ "value": "1000 kilogram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "density" ], @@ -113815,7 +113947,7 @@ "value": "1" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "depth" ], @@ -113869,7 +114001,7 @@ "value": "0.2 nanogram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "diether lipids" ], @@ -113914,7 +114046,7 @@ "value": "5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved carbon dioxide" ], @@ -113960,7 +114092,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved hydrogen" ], @@ -114004,7 +114136,7 @@ "value": "2059 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic carbon" ], @@ -114050,7 +114182,7 @@ "value": "761 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic nitrogen" ], @@ -114091,7 +114223,7 @@ "value": "56.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved inorganic phosphorus" ], @@ -114134,7 +114266,7 @@ "value": "197 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic carbon" ], @@ -114179,7 +114311,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved organic nitrogen" ], @@ -114223,7 +114355,7 @@ "value": "175 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "dissolved oxygen" ], @@ -114267,7 +114399,7 @@ "value": "28.71 microEinstein per square meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "downward PAR" ], @@ -114291,7 +114423,7 @@ "comments": [ "The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -114326,7 +114458,7 @@ "comments": [ "The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -114361,7 +114493,7 @@ "comments": [ "Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -114396,7 +114528,7 @@ "comments": [ "The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -114437,7 +114569,7 @@ "value": "100" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "slot_uri": "MIXS:0000093", @@ -114445,6 +114577,7 @@ "alias": "elev", "owner": "WaterInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -114466,7 +114599,7 @@ "name": "env_broad_scale", "description": "Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS", "title": "broad-scale environmental context", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 6, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -114498,7 +114631,7 @@ "name": "env_local_scale", "description": "Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.", "title": "local environmental context", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 7, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -114530,7 +114663,7 @@ "name": "env_medium", "description": "Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).", "title": "environmental medium", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 8, "is_a": "environment field", "string_serialization": "{termLabel} {[termID]}", @@ -114570,7 +114703,7 @@ "in_subset": [ "mixs extension" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "environmental package" ], @@ -114613,7 +114746,7 @@ "value": "time series design [EFO:0001779]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "experimental factor" ], @@ -114665,7 +114798,7 @@ "value": "2.5 volts" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "fluorescence" ], @@ -114698,7 +114831,7 @@ "value": "USA: Maryland, Bethesda" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "geographic location (country and/or sea,region)" ], @@ -114710,6 +114843,7 @@ "alias": "geo_loc_name", "owner": "WaterInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -114751,7 +114885,7 @@ "value": "5 mol per liter per hour" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "glucosidase activity" ], @@ -114790,7 +114924,7 @@ "value": "" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soil horizon method" ], @@ -114826,7 +114960,7 @@ "notes": [ "required where?" ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "is_a": "environment field", "string_serialization": "{float} {float}", @@ -114835,6 +114969,7 @@ "alias": "lat_lon", "owner": "WaterInterface", "domain_of": [ + "FieldResearchSite", "Biosample", "AirInterface", "BiofilmInterface", @@ -114876,7 +115011,7 @@ "value": "0.3 lux" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "light intensity" ], @@ -114917,7 +115052,7 @@ "value": "0.5 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean friction velocity" ], @@ -114960,7 +115095,7 @@ "value": "1 meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "mean peak friction velocity" ], @@ -114999,7 +115134,7 @@ "value": "Bicarbonate ion concentration;2075 micromole per kilogram" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "miscellaneous parameter" ], @@ -115051,7 +115186,7 @@ "value": "n-hexadecane;100 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "n-alkanes" ], @@ -115095,7 +115230,7 @@ "value": "65 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrate" ], @@ -115142,7 +115277,7 @@ "value": "0.5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrite" ], @@ -115188,7 +115323,7 @@ "value": "4.2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "nitrogen" ], @@ -115232,7 +115367,7 @@ "value": "1.5 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic carbon" ], @@ -115276,7 +115411,7 @@ "value": "1.75 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic matter" ], @@ -115321,7 +115456,7 @@ "value": "4 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organic nitrogen" ], @@ -115366,7 +115501,7 @@ "value": "total prokaryotes;3.5e7 cells per milliliter;qPCR" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "organism count" ], @@ -115398,7 +115533,7 @@ "name": "oxy_stat_samp", "description": "Oxygenation status of sample", "title": "oxygenation status of sample", - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 25, "is_a": "core field", "slot_uri": "MIXS:0000753", @@ -115445,7 +115580,7 @@ "value": "1.92 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic carbon" ], @@ -115488,7 +115623,7 @@ "value": "0.3 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "particulate organic nitrogen" ], @@ -115525,7 +115660,7 @@ "value": "antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "perturbation" ], @@ -115573,7 +115708,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "petroleum hydrocarbon" ], @@ -115612,7 +115747,7 @@ "value": "7.2" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pH" ], @@ -115651,7 +115786,7 @@ "value": "https://doi.org/10.2136/sssabookser5.3.c16" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 41, "is_a": "core field", "string_serialization": "{PMID}|{DOI}|{URL}", @@ -115696,7 +115831,7 @@ "value": "2.5 milligram per cubic meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phaeopigments" ], @@ -115740,7 +115875,7 @@ "value": "0.7 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phosphate" ], @@ -115786,7 +115921,7 @@ "value": "2.98 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "phospholipid fatty acid" ], @@ -115831,7 +115966,7 @@ "value": "3.926 micromole photons per second per square meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "photon flux" ], @@ -115872,7 +116007,7 @@ "value": "463 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "potassium" ], @@ -115918,7 +116053,7 @@ "value": "50 atmosphere" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "pressure" ], @@ -115964,7 +116099,7 @@ "value": "100 milligram per cubic meter per day" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "primary production" ], @@ -116005,7 +116140,7 @@ "value": "300 millivolt" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "redox potential" ], @@ -116048,7 +116183,7 @@ "value": "25 practical salinity unit" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "salinity" ], @@ -116091,7 +116226,7 @@ "value": "swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection device" ], @@ -116134,7 +116269,7 @@ "value": "swabbing" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample collection method" ], @@ -116180,7 +116315,7 @@ "value": "storing samples in ethanol" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample material processing" ], @@ -116227,7 +116362,7 @@ "value": "5 liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "amount or size of sample collected" ], @@ -116274,7 +116409,7 @@ "value": "P1Y6M" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage duration" ], @@ -116320,7 +116455,7 @@ "value": "Freezer no:5" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage location" ], @@ -116370,7 +116505,7 @@ "value": "-80 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample storage temperature" ], @@ -116413,7 +116548,7 @@ "value": "IGSN:DSJ0284" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 5, "string_serialization": "{text}:{text}", "multivalued": false, @@ -116463,7 +116598,7 @@ "value": "0.05 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "silicate" ], @@ -116499,7 +116634,7 @@ "value": "0-0.22 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size fraction selected" ], @@ -116550,7 +116685,7 @@ "value": "0.2 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction lower threshold" ], @@ -116592,7 +116727,7 @@ "value": "20 micrometer" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "size-fraction upper threshold" ], @@ -116634,7 +116769,7 @@ "value": "10.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sodium" ], @@ -116681,7 +116816,7 @@ "value": "0.1 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "soluble reactive phosphorus" ], @@ -116705,7 +116840,7 @@ "comments": [ "Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "https://gold.jgi.doe.gov/help" ], @@ -116757,7 +116892,7 @@ "value": "5 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfate" ], @@ -116803,7 +116938,7 @@ "value": "2 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sulfide" ], @@ -116849,7 +116984,7 @@ "value": "0.5 milligram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "suspended particulate matter" ], @@ -116886,7 +117021,7 @@ "value": "25 degree Celsius" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "temperature" ], @@ -116934,7 +117069,7 @@ "value": "high tide" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "tidal stage" ], @@ -116975,7 +117110,7 @@ "value": "500 meter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total depth of water column" ], @@ -117017,7 +117152,7 @@ "value": "40 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total dissolved nitrogen" ], @@ -117058,7 +117193,7 @@ "value": "40 microgram per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total inorganic nitrogen" ], @@ -117099,7 +117234,7 @@ "value": "50 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total nitrogen concentration" ], @@ -117143,7 +117278,7 @@ "value": "35 micromole per liter" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "total particulate carbon" ], @@ -117184,7 +117319,7 @@ "value": "0.3 nephelometric turbidity units" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "turbidity" ], @@ -117227,7 +117362,7 @@ "value": "10 cubic meter per second" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "water current" ], @@ -117255,7 +117390,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -117304,7 +117439,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -117361,7 +117496,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -117414,7 +117549,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -117463,7 +117598,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -117520,7 +117655,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -117565,7 +117700,7 @@ "value": "metagenomics; metabolomics; proteomics" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:investigation_type" ], @@ -117615,7 +117750,7 @@ "value": "Rock core CB1178(5-6) from NSW" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "aliases": [ "sample name" ], @@ -117673,7 +117808,7 @@ "value": "UUID:24f1467a-40f4-11ed-b878-0242ac120002" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "rank": 2, "is_a": "nucleic acid sequence source field", "string_serialization": "{text}:{text}", @@ -117811,7 +117946,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -117844,7 +117979,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -117877,7 +118012,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -117909,7 +118044,7 @@ "value": "experimental treatment: value" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:experimental_factor|additional_info" ], @@ -117941,7 +118076,7 @@ "value": "Basix PES, 13-100-106 FisherSci" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:filter_type" ], @@ -117976,7 +118111,7 @@ "value": "H218O" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:chem_administration" ], @@ -118012,7 +118147,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -118044,7 +118179,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -118072,7 +118207,7 @@ "value": "0.05 ug C/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118101,7 +118236,7 @@ "value": "0.05 ug N/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118127,7 +118262,7 @@ "value": "insect 0.23 ug; plant 1g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:biomass|microbial_biomass" ], @@ -118156,7 +118291,7 @@ "value": "https://doi.org/10.1038/s41467-021-26181-3" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118184,7 +118319,7 @@ "value": "https://doi.org/10.1016/0038-0717(85)90144-0" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:org_nitro|tot_nitro_cont_meth" ], @@ -118207,7 +118342,7 @@ "comments": [ "This is an open text field to provide any treatments that cannot be captured in the provided slots." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:additional_info" ], @@ -118239,7 +118374,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118272,7 +118407,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118307,7 +118442,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118341,7 +118476,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118375,7 +118510,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118408,7 +118543,7 @@ "value": "experimental treatment: value" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:experimental_factor|additional_info" ], @@ -118441,7 +118576,7 @@ "value": "Basix PES, 13-100-106 FisherSci" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:filter_type" ], @@ -118477,7 +118612,7 @@ "value": "H218O" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:chem_administration" ], @@ -118514,7 +118649,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -118547,7 +118682,7 @@ "value": "https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:micro_biomass_meth" ], @@ -118576,7 +118711,7 @@ "value": "0.05 ug C/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118606,7 +118741,7 @@ "value": "0.05 ug N/g dry soil" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118633,7 +118768,7 @@ "value": "insect 0.23 ug; plant 1g" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:biomass|microbial_biomass" ], @@ -118663,7 +118798,7 @@ "value": "https://doi.org/10.1038/s41467-021-26181-3" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:microbial_biomass" ], @@ -118692,7 +118827,7 @@ "value": "https://doi.org/10.1016/0038-0717(85)90144-0" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:org_nitro|tot_nitro_cont_meth" ], @@ -118716,7 +118851,7 @@ "comments": [ "This is an open text field to provide any treatments that cannot be captured in the provided slots." ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:additional_info" ], @@ -118749,7 +118884,7 @@ "value": "2021-04-15, 2021-04 and 2021 are all acceptable." } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -118783,7 +118918,7 @@ "value": "13:33 or 13:33:55" } ], - "from_schema": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc", + "from_schema": "https://w3id.org/nmdc/nmdc", "see_also": [ "MIxS:collection_date" ], @@ -119067,13 +119202,14 @@ "name": "alternative_identifiers", "description": "A list of alternative identifiers for the entity.", "from_schema": "https://example.com/nmdc_submission_schema", - "multivalued": false, + "multivalued": true, "alias": "alternative_identifiers", "owner": "NamedThing", "domain_of": [ "NamedThing" ], - "range": "string" + "range": "uriorcurie", + "pattern": "^[a-zA-Z_][a-zA-Z0-9_]*:[a-zA-Z_][a-zA-Z0-9_]*$" } } } diff --git a/project/jsonschema/nmdc_submission_schema.schema.json b/project/jsonschema/nmdc_submission_schema.schema.json index 920b216c..7aa63116 100644 --- a/project/jsonschema/nmdc_submission_schema.schema.json +++ b/project/jsonschema/nmdc_submission_schema.schema.json @@ -4006,6 +4006,52 @@ }, "JgiMgInterface": { "additionalProperties": false, + "allOf": [ + { + "if": { + "properties": { + "dna_cont_well": { + "pattern": ".+" + } + }, + "required": [ + "dna_cont_well" + ] + }, + "then": { + "properties": { + "dna_cont_type": { + "const": "plate" + } + }, + "required": [ + "dna_cont_type" + ] + } + }, + { + "if": { + "properties": { + "dna_cont_type": { + "const": "plate" + } + }, + "required": [ + "dna_cont_type" + ] + }, + "then": { + "properties": { + "dna_cont_well": { + "pattern": "^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$" + } + }, + "required": [ + "dna_cont_well" + ] + } + } + ], "description": "jgi_mg dh_interface", "properties": { "analysis_type": { @@ -4072,7 +4118,7 @@ }, "dna_volume": { "maximum": 1000, - "minimum": 25, + "minimum": 0, "type": "number" }, "proposal_dna": { @@ -4111,6 +4157,52 @@ }, "JgiMtInterface": { "additionalProperties": false, + "allOf": [ + { + "if": { + "properties": { + "rna_cont_well": { + "pattern": ".+" + } + }, + "required": [ + "rna_cont_well" + ] + }, + "then": { + "properties": { + "rna_cont_type": { + "const": "plate" + } + }, + "required": [ + "rna_cont_type" + ] + } + }, + { + "if": { + "properties": { + "rna_cont_type": { + "const": "plate" + } + }, + "required": [ + "rna_cont_type" + ] + }, + "then": { + "properties": { + "rna_cont_well": { + "pattern": "^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$" + } + }, + "required": [ + "rna_cont_well" + ] + } + } + ], "description": "jgi_mt dh_interface", "properties": { "analysis_type": { @@ -4182,7 +4274,7 @@ }, "rna_volume": { "maximum": 1000, - "minimum": 25, + "minimum": 0, "type": "number" }, "samp_name": { @@ -7763,52 +7855,7 @@ "$id": "https://example.com/nmdc_submission_schema", "$schema": "http://json-schema.org/draft-07/schema#", "additionalProperties": false, - "allOf": [ - { - "if": { - "properties": { - "rna_cont_well": { - "pattern": ".+" - } - }, - "required": [ - "rna_cont_well" - ] - }, - "then": { - "properties": { - "rna_cont_type": { - "const": "plate" - } - }, - "required": [ - "rna_cont_type" - ] - } - }, - { - "if": { - "properties": { - "rna_cont_type": { - "const": "plate" - } - }, - "required": [ - "rna_cont_type" - ] - }, - "then": { - "properties": { - "rna_cont_well": { - "pattern": "^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$" - } - }, - "required": [ - "rna_cont_well" - ] - } - } - ], + "description": "represents data produced by the DataHarmonizer tabs of the submission portal", "metamodel_version": "1.7.0", "properties": { "air_data": { diff --git a/project/owl/nmdc_submission_schema.owl.ttl b/project/owl/nmdc_submission_schema.owl.ttl index b240a8b4..4c71d8bf 100644 --- a/project/owl/nmdc_submission_schema.owl.ttl +++ b/project/owl/nmdc_submission_schema.owl.ttl @@ -142,20 +142,6 @@ nmdc_sub_schema:collection_time_inc a owl:ObjectProperty, rdfs:range nmdc_sub_schema:String ; skos:definition "Time the incubation was harvested/collected/ended. Only relevant for incubation samples." . -nmdc_sub_schema:dna_absorb1 a owl:ObjectProperty, - linkml:SlotDefinition ; - rdfs:label "dna_absorb1" ; - dcterms:title "DNA absorbance 260/280" ; - rdfs:range nmdc_sub_schema:Float ; - skos:definition "260/280 measurement of DNA sample purity" . - -nmdc_sub_schema:dna_absorb2 a owl:ObjectProperty, - linkml:SlotDefinition ; - rdfs:label "dna_absorb2" ; - dcterms:title "DNA absorbance 260/230" ; - rdfs:range nmdc_sub_schema:Float ; - skos:definition "260/230 measurement of DNA sample purity" . - nmdc_sub_schema:dna_concentration a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "dna_concentration" ; @@ -463,20 +449,6 @@ nmdc_sub_schema:replicate_number a owl:ObjectProperty, rdfs:range nmdc_sub_schema:String ; skos:definition "If sending biological replicates, indicate the rep number here." . -nmdc_sub_schema:rna_absorb1 a owl:ObjectProperty, - linkml:SlotDefinition ; - rdfs:label "rna_absorb1" ; - dcterms:title "RNA absorbance 260/280" ; - rdfs:range nmdc_sub_schema:Float ; - skos:definition "260/280 measurement of RNA sample purity" . - -nmdc_sub_schema:rna_absorb2 a owl:ObjectProperty, - linkml:SlotDefinition ; - rdfs:label "rna_absorb2" ; - dcterms:title "RNA absorbance 260/230" ; - rdfs:range nmdc_sub_schema:Float ; - skos:definition "260/230 measurement of RNA sample purity" . - nmdc_sub_schema:rna_concentration a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "rna_concentration" ; @@ -611,8 +583,8 @@ nmdc_sub_schema:technical_reps a owl:ObjectProperty, nmdc_sub_schema:SampIdNewTermsMixin, nmdc_sub_schema:SampleData, nmdc_sub_schema:SoilMixsInspiredMixin ; - linkml:classes "{'AirInterface': ClassDefinition(name='AirInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AirInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='air dh_interface', alt_descriptions={}, title='Air', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['air_PM_concen', 'alt', 'barometric_press', 'carb_dioxide', 'carb_monoxide', 'chem_administration', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'horizon_meth', 'humidity', 'lat_lon', 'methane', 'misc_param', 'organism_count', 'oxy_stat_samp', 'oxygen', 'perturbation', 'pollutants', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'AirInterface_sample_link', 'size_frac', 'solar_irradiance', 'specific_ecosystem', 'temp', 'ventilation_rate', 'ventilation_type', 'volatile_org_comp', 'wind_direction', 'wind_speed', 'AirInterface_air_PM_concen', 'AirInterface_alt', 'AirInterface_barometric_press', 'AirInterface_carb_dioxide', 'AirInterface_carb_monoxide', 'AirInterface_chem_administration', 'AirInterface_collection_date', 'AirInterface_depth', 'AirInterface_ecosystem', 'AirInterface_ecosystem_category', 'AirInterface_ecosystem_subtype', 'AirInterface_ecosystem_type', 'AirInterface_elev', 'AirInterface_env_broad_scale', 'AirInterface_env_local_scale', 'AirInterface_env_medium', 'AirInterface_env_package', 'AirInterface_experimental_factor', 'AirInterface_geo_loc_name', 'AirInterface_horizon_meth', 'AirInterface_humidity', 'AirInterface_lat_lon', 'AirInterface_methane', 'AirInterface_misc_param', 'AirInterface_organism_count', 'AirInterface_oxy_stat_samp', 'AirInterface_oxygen', 'AirInterface_perturbation', 'AirInterface_pollutants', 'AirInterface_salinity', 'AirInterface_samp_collec_device', 'AirInterface_samp_collec_method', 'AirInterface_samp_mat_process', 'AirInterface_samp_size', 'AirInterface_samp_store_dur', 'AirInterface_samp_store_loc', 'AirInterface_samp_store_temp', 'AirInterface_size_frac', 'AirInterface_solar_irradiance', 'AirInterface_specific_ecosystem', 'AirInterface_temp', 'AirInterface_ventilation_rate', 'AirInterface_ventilation_type', 'AirInterface_volatile_org_comp', 'AirInterface_wind_direction', 'AirInterface_wind_speed', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'air_PM_concen': SlotDefinition(name='air_PM_concen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particulate matter name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrograms per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description=\"Concentration of substances that remain suspended in the air, and comprise mixtures of organic and inorganic substances (PM10 and PM2.5); can report multiple PM's by entering numeric values preceded by name of PM\", alt_descriptions={}, title='air particulate matter concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='PM2.5;10 microgram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air particulate matter concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000108', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'barometric_press': SlotDefinition(name='barometric_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millibar', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Force per unit area exerted against a surface by the weight of air above that surface', alt_descriptions={}, title='barometric pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 millibar', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['barometric pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=49, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000096', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_dioxide': SlotDefinition(name='carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon dioxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='410 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_monoxide': SlotDefinition(name='carb_monoxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon monoxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon monoxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon monoxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000098', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity': SlotDefinition(name='humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Amount of water vapour in the air, at the time of sampling', alt_descriptions={}, title='humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000100', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxygen': SlotDefinition(name='oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Oxygen (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='600 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000104', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pollutants': SlotDefinition(name='pollutants', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pollutant name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter, microgram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Pollutant types and, amount or concentrations measured at the time of sampling; can report multiple pollutants by entering numeric values preceded by name of pollutant', alt_descriptions={}, title='pollutants', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='lead;0.15 microgram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pollutants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000107', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'solar_irradiance': SlotDefinition(name='solar_irradiance', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilowatts per square meter per day, ergs per square centimeter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The amount of solar energy that arrives at a specific area of a surface during a specific time interval', alt_descriptions={}, title='solar irradiance', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.36 kilowatts per square meter per day', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['solar irradiance'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=55, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000112', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_rate': SlotDefinition(name='ventilation_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per minute, liters per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation rate of the system in the sampled premises', alt_descriptions={}, title='ventilation rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='750 cubic meter per minute', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=56, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000114', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_type': SlotDefinition(name='ventilation_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ventilation type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation system used in the sampled premises', alt_descriptions={}, title='ventilation type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Operable windows', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=57, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000756', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'volatile_org_comp': SlotDefinition(name='volatile_org_comp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='volatile organic compound name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per cubic meter, parts per million, nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of carbon-based chemicals that easily evaporate at room temperature; can report multiple volatile organic compounds by entering numeric values preceded by name of compound', alt_descriptions={}, title='volatile organic compounds', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='formaldehyde;500 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile organic compounds'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=58, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000115', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wind_direction': SlotDefinition(name='wind_direction', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='wind direction name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Wind direction is the direction from which a wind originates', alt_descriptions={}, title='wind direction', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Northwest', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wind direction'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=59, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000757', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wind_speed': SlotDefinition(name='wind_speed', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second, kilometer per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Speed of wind measured at the time of sampling', alt_descriptions={}, title='wind speed', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='21 kilometer per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wind speed'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=60, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000118', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:AirInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'BiofilmInterface': ClassDefinition(name='BiofilmInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BiofilmInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='biofilm dh_interface', alt_descriptions={}, title='Biofilm', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkyl_diethers', 'alt', 'aminopept_act', 'ammonium', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'magnesium', 'mean_frict_vel', 'mean_peak_frict_vel', 'methane', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'potassium', 'pressure', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'BiofilmInterface_sample_link', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'tot_carb', 'tot_nitro_content', 'tot_org_carb', 'turbidity', 'water_content', 'BiofilmInterface_alkalinity', 'BiofilmInterface_alkyl_diethers', 'BiofilmInterface_alt', 'BiofilmInterface_aminopept_act', 'BiofilmInterface_ammonium', 'BiofilmInterface_bacteria_carb_prod', 'BiofilmInterface_biomass', 'BiofilmInterface_bishomohopanol', 'BiofilmInterface_bromide', 'BiofilmInterface_calcium', 'BiofilmInterface_carb_nitro_ratio', 'BiofilmInterface_chem_administration', 'BiofilmInterface_chloride', 'BiofilmInterface_chlorophyll', 'BiofilmInterface_collection_date', 'BiofilmInterface_depth', 'BiofilmInterface_diether_lipids', 'BiofilmInterface_diss_carb_dioxide', 'BiofilmInterface_diss_hydrogen', 'BiofilmInterface_diss_inorg_carb', 'BiofilmInterface_diss_org_carb', 'BiofilmInterface_diss_org_nitro', 'BiofilmInterface_diss_oxygen', 'BiofilmInterface_ecosystem', 'BiofilmInterface_ecosystem_category', 'BiofilmInterface_ecosystem_subtype', 'BiofilmInterface_ecosystem_type', 'BiofilmInterface_elev', 'BiofilmInterface_env_broad_scale', 'BiofilmInterface_env_local_scale', 'BiofilmInterface_env_medium', 'BiofilmInterface_env_package', 'BiofilmInterface_experimental_factor', 'BiofilmInterface_geo_loc_name', 'BiofilmInterface_glucosidase_act', 'BiofilmInterface_horizon_meth', 'BiofilmInterface_lat_lon', 'BiofilmInterface_magnesium', 'BiofilmInterface_mean_frict_vel', 'BiofilmInterface_mean_peak_frict_vel', 'BiofilmInterface_methane', 'BiofilmInterface_misc_param', 'BiofilmInterface_n_alkanes', 'BiofilmInterface_nitrate', 'BiofilmInterface_nitrite', 'BiofilmInterface_nitro', 'BiofilmInterface_org_carb', 'BiofilmInterface_org_matter', 'BiofilmInterface_org_nitro', 'BiofilmInterface_organism_count', 'BiofilmInterface_oxy_stat_samp', 'BiofilmInterface_part_org_carb', 'BiofilmInterface_perturbation', 'BiofilmInterface_petroleum_hydrocarb', 'BiofilmInterface_ph', 'BiofilmInterface_ph_meth', 'BiofilmInterface_phaeopigments', 'BiofilmInterface_phosphate', 'BiofilmInterface_phosplipid_fatt_acid', 'BiofilmInterface_potassium', 'BiofilmInterface_pressure', 'BiofilmInterface_redox_potential', 'BiofilmInterface_salinity', 'BiofilmInterface_samp_collec_device', 'BiofilmInterface_samp_collec_method', 'BiofilmInterface_samp_mat_process', 'BiofilmInterface_samp_size', 'BiofilmInterface_samp_store_dur', 'BiofilmInterface_samp_store_loc', 'BiofilmInterface_samp_store_temp', 'BiofilmInterface_silicate', 'BiofilmInterface_size_frac', 'BiofilmInterface_sodium', 'BiofilmInterface_specific_ecosystem', 'BiofilmInterface_sulfate', 'BiofilmInterface_sulfide', 'BiofilmInterface_temp', 'BiofilmInterface_tot_carb', 'BiofilmInterface_tot_nitro_content', 'BiofilmInterface_tot_org_carb', 'BiofilmInterface_turbidity', 'BiofilmInterface_water_content', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:BiofilmInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'BuiltEnvInterface': ClassDefinition(name='BuiltEnvInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuiltEnvInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='built_env dh_interface', alt_descriptions={}, title='Built Env', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['abs_air_humidity', 'address', 'adj_room', 'aero_struc', 'air_temp', 'alt', 'amount_light', 'arch_struc', 'avg_dew_point', 'avg_occup', 'avg_temp', 'bathroom_count', 'bedroom_count', 'build_docs', 'build_occup_type', 'building_setting', 'built_struc_age', 'built_struc_set', 'built_struc_type', 'carb_dioxide', 'ceil_area', 'ceil_cond', 'ceil_finish_mat', 'ceil_struc', 'ceil_texture', 'ceil_thermal_mass', 'ceil_type', 'ceil_water_mold', 'collection_date', 'cool_syst_id', 'date_last_rain', 'depth', 'dew_point', 'door_comp_type', 'door_cond', 'door_direct', 'door_loc', 'door_mat', 'door_move', 'door_size', 'door_type', 'door_type_metal', 'door_type_wood', 'door_water_mold', 'drawings', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'elevator', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'escalator', 'exp_duct', 'exp_pipe', 'experimental_factor', 'ext_door', 'ext_wall_orient', 'ext_window_orient', 'filter_type', 'fireplace_type', 'floor_age', 'floor_area', 'floor_cond', 'floor_count', 'floor_finish_mat', 'floor_struc', 'floor_thermal_mass', 'floor_water_mold', 'freq_clean', 'freq_cook', 'furniture', 'gender_restroom', 'geo_loc_name', 'hall_count', 'handidness', 'heat_cool_type', 'heat_deliv_loc', 'heat_sys_deliv_meth', 'heat_system_id', 'height_carper_fiber', 'horizon_meth', 'indoor_space', 'indoor_surf', 'inside_lux', 'int_wall_cond', 'last_clean', 'lat_lon', 'light_type', 'max_occup', 'mech_struc', 'number_pets', 'number_plants', 'number_resident', 'occup_density_samp', 'occup_document', 'occup_samp', 'organism_count', 'pres_animal_insect', 'quad_pos', 'rel_air_humidity', 'rel_humidity_out', 'rel_samp_loc', 'room_air_exch_rate', 'room_architec_elem', 'room_condt', 'room_connected', 'room_count', 'room_dim', 'room_door_dist', 'room_door_share', 'room_hallway', 'room_loc', 'room_moist_dam_hist', 'room_net_area', 'room_occup', 'room_samp_pos', 'room_type', 'room_vol', 'room_wall_share', 'room_window_count', 'samp_floor', 'samp_room_id', 'samp_sort_meth', 'samp_time_out', 'samp_weather', 'BuiltEnvInterface_sample_link', 'season', 'season_use', 'shad_dev_water_mold', 'shading_device_cond', 'shading_device_loc', 'shading_device_mat', 'shading_device_type', 'size_frac', 'space_typ_state', 'specific', 'specific_ecosystem', 'specific_humidity', 'substructure_type', 'surf_air_cont', 'surf_humidity', 'surf_material', 'surf_moisture', 'surf_moisture_ph', 'surf_temp', 'temp', 'temp_out', 'train_line', 'train_stat_loc', 'train_stop_loc', 'typ_occup_density', 'ventilation_type', 'vis_media', 'wall_area', 'wall_const_type', 'wall_finish_mat', 'wall_height', 'wall_loc', 'wall_surf_treatment', 'wall_texture', 'wall_thermal_mass', 'wall_water_mold', 'water_feat_size', 'water_feat_type', 'weekday', 'window_cond', 'window_cover', 'window_horiz_pos', 'window_loc', 'window_mat', 'window_open_freq', 'window_size', 'window_status', 'window_type', 'window_vert_pos', 'window_water_mold', 'BuiltEnvInterface_abs_air_humidity', 'BuiltEnvInterface_address', 'BuiltEnvInterface_adj_room', 'BuiltEnvInterface_aero_struc', 'BuiltEnvInterface_air_temp', 'BuiltEnvInterface_alt', 'BuiltEnvInterface_amount_light', 'BuiltEnvInterface_arch_struc', 'BuiltEnvInterface_avg_dew_point', 'BuiltEnvInterface_avg_occup', 'BuiltEnvInterface_avg_temp', 'BuiltEnvInterface_bathroom_count', 'BuiltEnvInterface_bedroom_count', 'BuiltEnvInterface_build_docs', 'BuiltEnvInterface_build_occup_type', 'BuiltEnvInterface_building_setting', 'BuiltEnvInterface_built_struc_age', 'BuiltEnvInterface_built_struc_set', 'BuiltEnvInterface_built_struc_type', 'BuiltEnvInterface_carb_dioxide', 'BuiltEnvInterface_ceil_area', 'BuiltEnvInterface_ceil_cond', 'BuiltEnvInterface_ceil_finish_mat', 'BuiltEnvInterface_ceil_struc', 'BuiltEnvInterface_ceil_texture', 'BuiltEnvInterface_ceil_thermal_mass', 'BuiltEnvInterface_ceil_type', 'BuiltEnvInterface_ceil_water_mold', 'BuiltEnvInterface_collection_date', 'BuiltEnvInterface_cool_syst_id', 'BuiltEnvInterface_date_last_rain', 'BuiltEnvInterface_depth', 'BuiltEnvInterface_dew_point', 'BuiltEnvInterface_door_comp_type', 'BuiltEnvInterface_door_cond', 'BuiltEnvInterface_door_direct', 'BuiltEnvInterface_door_loc', 'BuiltEnvInterface_door_mat', 'BuiltEnvInterface_door_move', 'BuiltEnvInterface_door_size', 'BuiltEnvInterface_door_type', 'BuiltEnvInterface_door_type_metal', 'BuiltEnvInterface_door_type_wood', 'BuiltEnvInterface_door_water_mold', 'BuiltEnvInterface_drawings', 'BuiltEnvInterface_ecosystem', 'BuiltEnvInterface_ecosystem_category', 'BuiltEnvInterface_ecosystem_subtype', 'BuiltEnvInterface_ecosystem_type', 'BuiltEnvInterface_elev', 'BuiltEnvInterface_elevator', 'BuiltEnvInterface_env_broad_scale', 'BuiltEnvInterface_env_local_scale', 'BuiltEnvInterface_env_medium', 'BuiltEnvInterface_env_package', 'BuiltEnvInterface_escalator', 'BuiltEnvInterface_exp_duct', 'BuiltEnvInterface_exp_pipe', 'BuiltEnvInterface_experimental_factor', 'BuiltEnvInterface_ext_door', 'BuiltEnvInterface_ext_wall_orient', 'BuiltEnvInterface_ext_window_orient', 'BuiltEnvInterface_filter_type', 'BuiltEnvInterface_fireplace_type', 'BuiltEnvInterface_floor_age', 'BuiltEnvInterface_floor_area', 'BuiltEnvInterface_floor_cond', 'BuiltEnvInterface_floor_count', 'BuiltEnvInterface_floor_finish_mat', 'BuiltEnvInterface_floor_struc', 'BuiltEnvInterface_floor_thermal_mass', 'BuiltEnvInterface_floor_water_mold', 'BuiltEnvInterface_freq_clean', 'BuiltEnvInterface_freq_cook', 'BuiltEnvInterface_furniture', 'BuiltEnvInterface_gender_restroom', 'BuiltEnvInterface_geo_loc_name', 'BuiltEnvInterface_hall_count', 'BuiltEnvInterface_handidness', 'BuiltEnvInterface_heat_cool_type', 'BuiltEnvInterface_heat_deliv_loc', 'BuiltEnvInterface_heat_sys_deliv_meth', 'BuiltEnvInterface_heat_system_id', 'BuiltEnvInterface_height_carper_fiber', 'BuiltEnvInterface_horizon_meth', 'BuiltEnvInterface_indoor_space', 'BuiltEnvInterface_indoor_surf', 'BuiltEnvInterface_inside_lux', 'BuiltEnvInterface_int_wall_cond', 'BuiltEnvInterface_last_clean', 'BuiltEnvInterface_lat_lon', 'BuiltEnvInterface_light_type', 'BuiltEnvInterface_max_occup', 'BuiltEnvInterface_mech_struc', 'BuiltEnvInterface_number_pets', 'BuiltEnvInterface_number_plants', 'BuiltEnvInterface_number_resident', 'BuiltEnvInterface_occup_density_samp', 'BuiltEnvInterface_occup_document', 'BuiltEnvInterface_occup_samp', 'BuiltEnvInterface_organism_count', 'BuiltEnvInterface_pres_animal_insect', 'BuiltEnvInterface_quad_pos', 'BuiltEnvInterface_rel_air_humidity', 'BuiltEnvInterface_rel_humidity_out', 'BuiltEnvInterface_rel_samp_loc', 'BuiltEnvInterface_room_air_exch_rate', 'BuiltEnvInterface_room_architec_elem', 'BuiltEnvInterface_room_condt', 'BuiltEnvInterface_room_connected', 'BuiltEnvInterface_room_count', 'BuiltEnvInterface_room_dim', 'BuiltEnvInterface_room_door_dist', 'BuiltEnvInterface_room_door_share', 'BuiltEnvInterface_room_hallway', 'BuiltEnvInterface_room_loc', 'BuiltEnvInterface_room_moist_dam_hist', 'BuiltEnvInterface_room_net_area', 'BuiltEnvInterface_room_occup', 'BuiltEnvInterface_room_samp_pos', 'BuiltEnvInterface_room_type', 'BuiltEnvInterface_room_vol', 'BuiltEnvInterface_room_wall_share', 'BuiltEnvInterface_room_window_count', 'BuiltEnvInterface_samp_floor', 'BuiltEnvInterface_samp_room_id', 'BuiltEnvInterface_samp_sort_meth', 'BuiltEnvInterface_samp_time_out', 'BuiltEnvInterface_samp_weather', 'BuiltEnvInterface_season', 'BuiltEnvInterface_season_use', 'BuiltEnvInterface_shad_dev_water_mold', 'BuiltEnvInterface_shading_device_cond', 'BuiltEnvInterface_shading_device_loc', 'BuiltEnvInterface_shading_device_mat', 'BuiltEnvInterface_shading_device_type', 'BuiltEnvInterface_size_frac', 'BuiltEnvInterface_space_typ_state', 'BuiltEnvInterface_specific', 'BuiltEnvInterface_specific_ecosystem', 'BuiltEnvInterface_specific_humidity', 'BuiltEnvInterface_substructure_type', 'BuiltEnvInterface_surf_air_cont', 'BuiltEnvInterface_surf_humidity', 'BuiltEnvInterface_surf_material', 'BuiltEnvInterface_surf_moisture', 'BuiltEnvInterface_surf_moisture_ph', 'BuiltEnvInterface_surf_temp', 'BuiltEnvInterface_temp', 'BuiltEnvInterface_temp_out', 'BuiltEnvInterface_train_line', 'BuiltEnvInterface_train_stat_loc', 'BuiltEnvInterface_train_stop_loc', 'BuiltEnvInterface_typ_occup_density', 'BuiltEnvInterface_ventilation_type', 'BuiltEnvInterface_vis_media', 'BuiltEnvInterface_wall_area', 'BuiltEnvInterface_wall_const_type', 'BuiltEnvInterface_wall_finish_mat', 'BuiltEnvInterface_wall_height', 'BuiltEnvInterface_wall_loc', 'BuiltEnvInterface_wall_surf_treatment', 'BuiltEnvInterface_wall_texture', 'BuiltEnvInterface_wall_thermal_mass', 'BuiltEnvInterface_wall_water_mold', 'BuiltEnvInterface_water_feat_size', 'BuiltEnvInterface_water_feat_type', 'BuiltEnvInterface_weekday', 'BuiltEnvInterface_window_cond', 'BuiltEnvInterface_window_cover', 'BuiltEnvInterface_window_horiz_pos', 'BuiltEnvInterface_window_loc', 'BuiltEnvInterface_window_mat', 'BuiltEnvInterface_window_open_freq', 'BuiltEnvInterface_window_size', 'BuiltEnvInterface_window_status', 'BuiltEnvInterface_window_type', 'BuiltEnvInterface_window_vert_pos', 'BuiltEnvInterface_window_water_mold', 'BuiltEnvInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'abs_air_humidity': SlotDefinition(name='abs_air_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram, kilogram per kilogram, kilogram, pound', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Actual mass of water vapor - mh20 - present in the air water vapor mixture', alt_descriptions={}, title='absolute air humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='9 gram per gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['absolute air humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=61, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000122', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'address': SlotDefinition(name='address', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The street name and building number where the sampling occurred.', alt_descriptions={}, title='address', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['address'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=62, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}{text}', singular_name=None, domain=None, slot_uri='MIXS:0000218', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'adj_room': SlotDefinition(name='adj_room', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of rooms (room number, room name) immediately adjacent to the sampling room', alt_descriptions={}, title='adjacent rooms', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['adjacent rooms'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=63, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000219', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aero_struc': SlotDefinition(name='aero_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Aerospace structures typically consist of thin plates with stiffeners for the external surfaces, bulkheads and frames to support the shape and fasteners such as welds, rivets, screws and bolts to hold the components together', alt_descriptions={}, title='aerospace structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plane', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aerospace structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=64, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[plane|glider]', singular_name=None, domain=None, slot_uri='MIXS:0000773', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'air_temp': SlotDefinition(name='air_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature of the air at the time of sampling', alt_descriptions={}, title='air temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=65, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000124', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'amount_light': SlotDefinition(name='amount_light', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux, lumens per square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The unit of illuminance and luminous emittance, measuring luminous flux per unit area', alt_descriptions={}, title='amount of light', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount of light'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=66, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000140', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'arch_struc': SlotDefinition(name='arch_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='An architectural structure is a human-made, free-standing, immobile outdoor construction', alt_descriptions={}, title='architectural structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='shed', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['architectural structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=67, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000774', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='arch_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_dew_point': SlotDefinition(name='avg_dew_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average of dew point measures taken at the beginning of every hour over a 24 hour period on the sampling day', alt_descriptions={}, title='average dew point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average dew point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=68, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000141', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_occup': SlotDefinition(name='avg_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Daily average occupancy of room. Indicate the number of person(s) daily occupying the sampling room.', alt_descriptions={}, title='average daily occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average daily occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=69, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000775', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_temp': SlotDefinition(name='avg_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average of temperatures taken at the beginning of every hour over a 24 hour period on the sampling day', alt_descriptions={}, title='average temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=70, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000142', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bathroom_count': SlotDefinition(name='bathroom_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of bathrooms in the building', alt_descriptions={}, title='bathroom count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bathroom count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=71, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000776', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bedroom_count': SlotDefinition(name='bedroom_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of bedrooms in the building', alt_descriptions={}, title='bedroom count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bedroom count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=72, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000777', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'build_docs': SlotDefinition(name='build_docs', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building design, construction and operation documents', alt_descriptions={}, title='design, construction, and operation documents', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='maintenance plans', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['design, construction, and operation documents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=73, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000787', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='build_docs_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'build_occup_type': SlotDefinition(name='build_occup_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The primary function for which a building or discrete part of a building is intended to be used', alt_descriptions={}, title='building occupancy type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='market', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['building occupancy type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=74, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000761', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='build_occup_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'building_setting': SlotDefinition(name='building_setting', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A location (geography) where a building is set', alt_descriptions={}, title='building setting', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rural', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['building setting'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=75, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000768', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='building_setting_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_age': SlotDefinition(name='built_struc_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The age of the built structure since construction', alt_descriptions={}, title='built structure age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=76, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000145', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_set': SlotDefinition(name='built_struc_set', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The characterization of the location of the built structure as high or low human density', alt_descriptions={}, title='built structure setting', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rural', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure setting'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=77, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[urban|rural]', singular_name=None, domain=None, slot_uri='MIXS:0000778', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_type': SlotDefinition(name='built_struc_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A physical structure that is a body or assemblage of bodies in space to form a system capable of supporting loads', alt_descriptions={}, title='built structure type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=78, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000721', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_dioxide': SlotDefinition(name='carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon dioxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='410 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_area': SlotDefinition(name='ceil_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The area of the ceiling space within the room', alt_descriptions={}, title='ceiling area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 square meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=79, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000148', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_cond': SlotDefinition(name='ceil_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the ceiling at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='ceiling condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='damaged', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=80, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000779', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_finish_mat': SlotDefinition(name='ceil_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material used to finish a ceiling', alt_descriptions={}, title='ceiling finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='stucco', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=81, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000780', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_struc': SlotDefinition(name='ceil_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The construction format of the ceiling', alt_descriptions={}, title='ceiling structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='concrete', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=82, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[wood frame|concrete]', singular_name=None, domain=None, slot_uri='MIXS:0000782', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_texture': SlotDefinition(name='ceil_texture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The feel, appearance, or consistency of a ceiling surface', alt_descriptions={}, title='ceiling texture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='popcorn', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling texture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=83, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000783', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_texture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_thermal_mass': SlotDefinition(name='ceil_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the ceiling to provide inertia against temperature fluctuations. Generally this means concrete that is exposed. A metal deck that supports a concrete slab will act thermally as long as it is exposed to room air flow', alt_descriptions={}, title='ceiling thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=84, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000143', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_type': SlotDefinition(name='ceil_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The type of ceiling according to the ceiling's appearance or construction\", alt_descriptions={}, title='ceiling type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='coffered', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=85, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000784', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_water_mold': SlotDefinition(name='ceil_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the ceiling', alt_descriptions={}, title='ceiling signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=86, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000781', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cool_syst_id': SlotDefinition(name='cool_syst_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The cooling system identifier', alt_descriptions={}, title='cooling system identifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12345', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['cooling system identifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=87, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000785', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_last_rain': SlotDefinition(name='date_last_rain', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The date of the last time it rained', alt_descriptions={}, title='date last rain', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11:T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['date last rain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=88, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000786', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dew_point': SlotDefinition(name='dew_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The temperature to which a given parcel of humid air must be cooled, at constant barometric pressure, for water vapor to condense into water.', alt_descriptions={}, title='dew point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='22 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dew point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=89, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000129', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_comp_type': SlotDefinition(name='door_comp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The composite type of the door', alt_descriptions={}, title='door type, composite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='revolving', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, composite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=90, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000795', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_comp_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_cond': SlotDefinition(name='door_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The phsical condition of the door', alt_descriptions={}, title='door condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=91, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000788', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_direct': SlotDefinition(name='door_direct', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The direction the door opens', alt_descriptions={}, title='door direction of opening', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='inward', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door direction of opening'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=92, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000789', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_direct_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_loc': SlotDefinition(name='door_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the door in the room', alt_descriptions={}, title='door location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=93, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000790', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_mat': SlotDefinition(name='door_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material the door is composed of', alt_descriptions={}, title='door material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=94, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000791', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_move': SlotDefinition(name='door_move', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of movement of the door', alt_descriptions={}, title='door movement', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swinging', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door movement'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=95, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000792', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_move_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_size': SlotDefinition(name='door_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The size of the door', alt_descriptions={}, title='door area or size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 square meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door area or size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=96, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000158', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type': SlotDefinition(name='door_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of door material', alt_descriptions={}, title='door type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wooden', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=97, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000794', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type_metal': SlotDefinition(name='door_type_metal', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of metal door', alt_descriptions={}, title='door type, metal', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='hollow', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, metal'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=98, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000796', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_metal_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type_wood': SlotDefinition(name='door_type_wood', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of wood door', alt_descriptions={}, title='door type, wood', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='battened', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, wood'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=99, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000797', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_wood_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_water_mold': SlotDefinition(name='door_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on a door', alt_descriptions={}, title='door signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=100, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000793', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'drawings': SlotDefinition(name='drawings', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The buildings architectural drawings; if design is chosen, indicate phase-conceptual, schematic, design development, and construction documents', alt_descriptions={}, title='drawings', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sketch', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['drawings'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000798', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='drawings_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elevator': SlotDefinition(name='elevator', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of elevators within the built structure', alt_descriptions={}, title='elevator count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['elevator count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=102, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000799', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'escalator': SlotDefinition(name='escalator', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of escalators within the built structure', alt_descriptions={}, title='escalator count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['escalator count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000800', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exp_duct': SlotDefinition(name='exp_duct', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The amount of exposed ductwork in the room', alt_descriptions={}, title='exposed ductwork', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exposed ductwork'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=104, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000144', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exp_pipe': SlotDefinition(name='exp_pipe', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of exposed pipes in the room', alt_descriptions={}, title='exposed pipes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exposed pipes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000220', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_door': SlotDefinition(name='ext_door', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of exterior doors in the built structure', alt_descriptions={}, title='exterior door count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exterior door count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=106, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000170', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_wall_orient': SlotDefinition(name='ext_wall_orient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The orientation of the exterior wall', alt_descriptions={}, title='orientations of exterior wall', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='northwest', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['orientations of exterior wall'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000817', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ext_wall_orient_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_window_orient': SlotDefinition(name='ext_window_orient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The compass direction the exterior window of the room is facing', alt_descriptions={}, title='orientations of exterior window', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='southwest', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['orientations of exterior window'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=108, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000818', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ext_window_orient_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_type': SlotDefinition(name='filter_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='A device which removes solid particulates or airborne molecular contaminants', alt_descriptions={}, title='filter type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='HEPA', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['filter type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=109, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000765', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='filter_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fireplace_type': SlotDefinition(name='fireplace_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A firebox with chimney', alt_descriptions={}, title='fireplace type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood burning', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fireplace type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=110, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[gas burning|wood burning]', singular_name=None, domain=None, slot_uri='MIXS:0000802', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_age': SlotDefinition(name='floor_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='years, weeks, days', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The time period since installment of the carpet or flooring', alt_descriptions={}, title='floor age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000164', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_area': SlotDefinition(name='floor_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The area of the floor space within the room', alt_descriptions={}, title='floor area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=112, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000165', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_cond': SlotDefinition(name='floor_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the floor at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='floor condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000803', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_count': SlotDefinition(name='floor_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of floors in the building, including basements and mechanical penthouse', alt_descriptions={}, title='floor count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=114, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_finish_mat': SlotDefinition(name='floor_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The floor covering type; the finished surface that is walked on', alt_descriptions={}, title='floor finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='carpet', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000804', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_struc': SlotDefinition(name='floor_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the structural elements and subfloor upon which the finish flooring is installed', alt_descriptions={}, title='floor structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='concrete', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=116, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000806', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_thermal_mass': SlotDefinition(name='floor_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the floor to provide inertia against temperature fluctuations', alt_descriptions={}, title='floor thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=117, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000166', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_water_mold': SlotDefinition(name='floor_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew in a room', alt_descriptions={}, title='floor signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ceiling discoloration', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=118, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000805', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_water_mold_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'freq_clean': SlotDefinition(name='freq_clean', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration or {text}', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times the sample location is cleaned. Frequency of cleaning might be on a Daily basis, Weekly, Monthly, Quarterly or Annually.', alt_descriptions={}, title='frequency of cleaning', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['frequency of cleaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=119, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000226', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'freq_cook': SlotDefinition(name='freq_cook', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times a meal is cooked per week', alt_descriptions={}, title='frequency of cooking', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['frequency of cooking'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=120, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000227', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'furniture': SlotDefinition(name='furniture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The types of furniture present in the sampled room', alt_descriptions={}, title='furniture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='chair', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['furniture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=121, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000807', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='furniture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gender_restroom': SlotDefinition(name='gender_restroom', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The gender type of the restroom', alt_descriptions={}, title='gender of restroom', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='male', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gender of restroom'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=122, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000808', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='gender_restroom_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hall_count': SlotDefinition(name='hall_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total count of hallways and cooridors in the built structure', alt_descriptions={}, title='hallway/corridor count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hallway/corridor count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=123, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000228', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'handidness': SlotDefinition(name='handidness', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The handidness of the individual sampled', alt_descriptions={}, title='handidness', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='right handedness', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['handidness'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=124, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000809', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='handidness_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_cool_type': SlotDefinition(name='heat_cool_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Methods of conditioning or heating a room or building', alt_descriptions={}, title='heating and cooling system type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='heat pump', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating and cooling system type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=125, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000766', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='heat_cool_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_deliv_loc': SlotDefinition(name='heat_deliv_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The location of heat delivery within the room', alt_descriptions={}, title='heating delivery locations', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating delivery locations'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=126, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000810', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='heat_deliv_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_sys_deliv_meth': SlotDefinition(name='heat_sys_deliv_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The method by which the heat is delivered through the system', alt_descriptions={}, title='heating system delivery method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='radiant', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating system delivery method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=127, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[conductive|radiant]', singular_name=None, domain=None, slot_uri='MIXS:0000812', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_system_id': SlotDefinition(name='heat_system_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The heating system identifier', alt_descriptions={}, title='heating system identifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating system identifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=128, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000833', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'height_carper_fiber': SlotDefinition(name='height_carper_fiber', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average carpet fiber height in the indoor environment', alt_descriptions={}, title='height carpet fiber mat', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['height carpet fiber mat'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=129, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000167', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indoor_space': SlotDefinition(name='indoor_space', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A distinguishable space within a structure, the purpose for which discrete areas of a building is used', alt_descriptions={}, title='indoor space', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='foyer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['indoor space'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=130, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000763', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='indoor_space_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indoor_surf': SlotDefinition(name='indoor_surf', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of indoor surface', alt_descriptions={}, title='indoor surface', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wall', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['indoor surface'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=131, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000764', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='indoor_surf_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inside_lux': SlotDefinition(name='inside_lux', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilowatt per square metre', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded value at sampling time (power density)', alt_descriptions={}, title='inside lux light', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inside lux light'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=132, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000168', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'int_wall_cond': SlotDefinition(name='int_wall_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the wall at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='interior wall condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='damaged', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['interior wall condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=133, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000813', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='int_wall_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_clean': SlotDefinition(name='last_clean', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The last time the floor was cleaned (swept, mopped, vacuumed)', alt_descriptions={}, title='last time swept/mopped/vacuumed', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11:T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['last time swept/mopped/vacuumed'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=134, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000814', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_type': SlotDefinition(name='light_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Application of light to achieve some practical or aesthetic effect. Lighting includes the use of both artificial light sources such as lamps and light fixtures, as well as natural illumination by capturing daylight. Can also include absence of light', alt_descriptions={}, title='light type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='desk lamp', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=135, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000769', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='light_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'max_occup': SlotDefinition(name='max_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The maximum amount of people allowed in the indoor environment', alt_descriptions={}, title='maximum occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['maximum occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=136, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000229', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mech_struc': SlotDefinition(name='mech_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='mechanical structure: a moving structure', alt_descriptions={}, title='mechanical structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elevator', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mechanical structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=137, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000815', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='mech_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_pets': SlotDefinition(name='number_pets', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of pets residing in the sampled space', alt_descriptions={}, title='number of pets', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of pets'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=138, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000231', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_plants': SlotDefinition(name='number_plants', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of plant(s) in the sampling space', alt_descriptions={}, title='number of houseplants', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of houseplants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=139, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000230', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_resident': SlotDefinition(name='number_resident', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of individuals currently occupying in the sampling location', alt_descriptions={}, title='number of residents', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of residents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=140, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000232', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_density_samp': SlotDefinition(name='occup_density_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Average number of occupants at time of sampling per square footage', alt_descriptions={}, title='occupant density at sampling', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupant density at sampling'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=141, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000217', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_document': SlotDefinition(name='occup_document', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of documentation of occupancy', alt_descriptions={}, title='occupancy documentation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='estimate', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupancy documentation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=142, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000816', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='occup_document_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_samp': SlotDefinition(name='occup_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Number of occupants present at time of sample within the given space', alt_descriptions={}, title='occupancy at sampling', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupancy at sampling'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=143, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000772', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pres_animal_insect': SlotDefinition(name='pres_animal_insect', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration;count', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type and number of animals or insects present in the sampling space.', alt_descriptions={}, title='presence of pets, animals, or insects', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='cat;5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['presence of pets, animals, or insects'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=144, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000819', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(cat|dog|rodent|snake|other);\\\\d+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'quad_pos': SlotDefinition(name='quad_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The quadrant position of the sampling room within the building', alt_descriptions={}, title='quadrant position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='West side', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['quadrant position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=145, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000820', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='quad_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_air_humidity': SlotDefinition(name='rel_air_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Partial vapor and air pressure, density of the vapor and air, or by the actual mass of the vapor and air', alt_descriptions={}, title='relative air humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='80%', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['relative air humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=146, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000121', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_humidity_out': SlotDefinition(name='rel_humidity_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram of air, kilogram of air', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded outside relative humidity value at the time of sampling', alt_descriptions={}, title='outside relative humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12 per kilogram of air', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['outside relative humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=147, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000188', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_samp_loc': SlotDefinition(name='rel_samp_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The sampling location within the train car', alt_descriptions={}, title='relative sampling location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='center of car', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['relative sampling location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=148, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000821', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='rel_samp_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_air_exch_rate': SlotDefinition(name='room_air_exch_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The rate at which outside air replaces indoor air in a given space', alt_descriptions={}, title='room air exchange rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room air exchange rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=149, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000169', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_architec_elem': SlotDefinition(name='room_architec_elem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The unique details and component parts that, together, form the architecture of a distinguisahable space within a built structure', alt_descriptions={}, title='room architectural elements', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room architectural elements'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=150, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000233', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_condt': SlotDefinition(name='room_condt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The condition of the room at the time of sampling', alt_descriptions={}, title='room condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=151, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000822', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_condt_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_connected': SlotDefinition(name='room_connected', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of rooms connected to the sampling room by a doorway', alt_descriptions={}, title='rooms connected by a doorway', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='office', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms connected by a doorway'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=152, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000826', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_connected_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_count': SlotDefinition(name='room_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total count of rooms in the built structure including all room types', alt_descriptions={}, title='room count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=153, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000234', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_dim': SlotDefinition(name='room_dim', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length, width and height of sampling room', alt_descriptions={}, title='room dimensions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room dimensions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=154, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit} x {integer} {unit} x {integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000192', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_door_dist': SlotDefinition(name='room_door_dist', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Distance between doors (meters) in the hallway between the sampling room and adjacent rooms', alt_descriptions={}, title='room door distance', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room door distance'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=155, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000193', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_door_share': SlotDefinition(name='room_door_share', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) sharing a door with the sampling room', alt_descriptions={}, title='rooms that share a door with sampling room', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that share a door with sampling room'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=156, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000242', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_hallway': SlotDefinition(name='room_hallway', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) located in the same hallway as sampling room', alt_descriptions={}, title='rooms that are on the same hallway', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that are on the same hallway'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=157, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000238', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_loc': SlotDefinition(name='room_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The position of the room within the building', alt_descriptions={}, title='room location in building', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='interior room', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room location in building'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=158, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000823', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_moist_dam_hist': SlotDefinition(name='room_moist_dam_hist', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The history of moisture damage or mold in the past 12 months. Number of events of moisture damage or mold observed', alt_descriptions={}, title='room moisture damage or mold history', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room moisture damage or mold history'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=159, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000235', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_net_area': SlotDefinition(name='room_net_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square feet, square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The net floor area of sampling room. Net area excludes wall thicknesses', alt_descriptions={}, title='room net area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room net area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=160, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000194', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_occup': SlotDefinition(name='room_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Count of room occupancy at time of sampling', alt_descriptions={}, title='room occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=161, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000236', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_samp_pos': SlotDefinition(name='room_samp_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The horizontal sampling position in the room relative to architectural elements', alt_descriptions={}, title='room sampling position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='south corner', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room sampling position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=162, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000824', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_samp_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_type': SlotDefinition(name='room_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The main purpose or activity of the sampling room. A room is any distinguishable space within a structure', alt_descriptions={}, title='room type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bathroom', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=163, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000825', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_vol': SlotDefinition(name='room_vol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic feet, cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Volume of sampling room', alt_descriptions={}, title='room volume', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room volume'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=164, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000195', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_wall_share': SlotDefinition(name='room_wall_share', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) sharing a wall with the sampling room', alt_descriptions={}, title='rooms that share a wall with sampling room', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that share a wall with sampling room'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=165, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000243', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_window_count': SlotDefinition(name='room_window_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Number of windows in the room', alt_descriptions={}, title='room window count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room window count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=166, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000237', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_floor': SlotDefinition(name='samp_floor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The floor of the building, where the sampling room is located', alt_descriptions={}, title='sampling floor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4th floor', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling floor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=167, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000828', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_floor_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_room_id': SlotDefinition(name='samp_room_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sampling room number. This ID should be consistent with the designations on the building floor plans', alt_descriptions={}, title='sampling room ID or name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling room ID or name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=168, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000244', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_sort_meth': SlotDefinition(name='samp_sort_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Method by which samples are sorted; open face filter collecting total suspended particles, prefilter to remove particles larger than X micrometers in diameter, where common values of X would be 10 and 2.5 full size sorting in a cascade impactor.', alt_descriptions={}, title='sample size sorting method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample size sorting method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=169, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000216', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_time_out': SlotDefinition(name='samp_time_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='time', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recent and long term history of outside sampling', alt_descriptions={}, title='sampling time outside', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling time outside'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=170, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000196', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_weather': SlotDefinition(name='samp_weather', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The weather on the sampling day', alt_descriptions={}, title='sampling day weather', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='foggy', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling day weather'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=171, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000827', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_weather_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season': SlotDefinition(name='season', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCIT:C94729', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The season when sampling occurred. Any of the four periods into which the year is divided by the equinoxes and solstices. This field accepts terms listed under season (http://purl.obolibrary.org/obo/NCIT_C94729).', alt_descriptions={}, title='season', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='autumn [NCIT:C94733]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['season'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=172, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000829', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_use': SlotDefinition(name='season_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The seasons the space is occupied', alt_descriptions={}, title='seasonal use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Winter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['seasonal use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=173, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000830', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='season_use_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shad_dev_water_mold': SlotDefinition(name='shad_dev_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the shading device', alt_descriptions={}, title='shading device signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=174, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000834', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_cond': SlotDefinition(name='shading_device_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the shading device at the time of sampling', alt_descriptions={}, title='shading device condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=175, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000831', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='shading_device_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_loc': SlotDefinition(name='shading_device_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The location of the shading device in relation to the built structure', alt_descriptions={}, title='shading device location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='exterior', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=176, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[exterior|interior]', singular_name=None, domain=None, slot_uri='MIXS:0000832', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_mat': SlotDefinition(name='shading_device_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='material name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material the shading device is composed of', alt_descriptions={}, title='shading device material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=177, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000245', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_type': SlotDefinition(name='shading_device_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of shading device', alt_descriptions={}, title='shading device type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='slatted aluminum awning', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=178, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000835', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='shading_device_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'space_typ_state': SlotDefinition(name='space_typ_state', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Customary or normal state of the space', alt_descriptions={}, title='space typical state', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='typically occupied', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['space typical state'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=179, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[typically occupied|typically unoccupied]', singular_name=None, domain=None, slot_uri='MIXS:0000770', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific': SlotDefinition(name='specific', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building specifications. If design is chosen, indicate phase: conceptual, schematic, design development, construction documents', alt_descriptions={}, title='specifications', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='construction', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['specifications'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=180, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000836', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='specific_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_humidity': SlotDefinition(name='specific_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram of air, kilogram of air', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The mass of water vapour in a unit mass of moist air, usually expressed as grams of vapour per kilogram of air, or, in air conditioning, as grains per pound.', alt_descriptions={}, title='specific humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 per kilogram of air', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['specific humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=181, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000214', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'substructure_type': SlotDefinition(name='substructure_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The substructure or under building is that largely hidden section of the building which is built off the foundations to the ground floor level', alt_descriptions={}, title='substructure type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='basement', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['substructure type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=182, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000767', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='substructure_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_air_cont': SlotDefinition(name='surf_air_cont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Contaminant identified on surface', alt_descriptions={}, title='surface-air contaminant', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='radon', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface-air contaminant'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=183, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000759', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='surf_air_cont_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_humidity': SlotDefinition(name='surf_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Surfaces: water activity as a function of air and material moisture', alt_descriptions={}, title='surface humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10%', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=184, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000123', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_material': SlotDefinition(name='surf_material', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Surface materials at the point of sampling', alt_descriptions={}, title='surface material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=185, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000758', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='surf_material_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_moisture': SlotDefinition(name='surf_moisture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million, gram per cubic meter, gram per square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Water held on a surface', alt_descriptions={}, title='surface moisture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.01 gram per square meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface moisture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=186, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000128', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_moisture_ph': SlotDefinition(name='surf_moisture_ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='ph measurement of surface', alt_descriptions={}, title='surface moisture pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface moisture pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=187, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000760', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_temp': SlotDefinition(name='surf_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature of the surface at the time of sampling', alt_descriptions={}, title='surface temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=188, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000125', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp_out': SlotDefinition(name='temp_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded temperature value at sampling time outside', alt_descriptions={}, title='temperature outside house', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature outside house'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=189, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000197', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_line': SlotDefinition(name='train_line', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The subway line name', alt_descriptions={}, title='train line', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='red', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train line'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=190, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000837', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_line_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_stat_loc': SlotDefinition(name='train_stat_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The train station collection location', alt_descriptions={}, title='train station collection location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='forest hills', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train station collection location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=191, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000838', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_stat_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_stop_loc': SlotDefinition(name='train_stop_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The train stop collection location', alt_descriptions={}, title='train stop collection location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='end', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train stop collection location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=192, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000839', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_stop_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typ_occup_density': SlotDefinition(name='typ_occup_density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Customary or normal density of occupants', alt_descriptions={}, title='typical occupant density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['typical occupant density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=193, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000771', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_type': SlotDefinition(name='ventilation_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ventilation type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation system used in the sampled premises', alt_descriptions={}, title='ventilation type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Operable windows', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=57, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000756', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vis_media': SlotDefinition(name='vis_media', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building visual media', alt_descriptions={}, title='visual media', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='3D scans', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['visual media'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=194, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000840', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='vis_media_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_area': SlotDefinition(name='wall_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The total area of the sampled room's walls\", alt_descriptions={}, title='wall area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=195, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000198', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_const_type': SlotDefinition(name='wall_const_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building class of the wall defined by the composition of the building elements and fire-resistance rating.', alt_descriptions={}, title='wall construction type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='fire resistive', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall construction type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=196, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000841', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_const_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_finish_mat': SlotDefinition(name='wall_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material utilized to finish the outer most layer of the wall', alt_descriptions={}, title='wall finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=197, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000842', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_height': SlotDefinition(name='wall_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average height of the walls in the sampled room', alt_descriptions={}, title='wall height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=198, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000221', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_loc': SlotDefinition(name='wall_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the wall within the room', alt_descriptions={}, title='wall location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=199, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000843', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_surf_treatment': SlotDefinition(name='wall_surf_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The surface treatment of interior wall', alt_descriptions={}, title='wall surface treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='paneling', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall surface treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=200, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000845', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_surf_treatment_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_texture': SlotDefinition(name='wall_texture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The feel, appearance, or consistency of a wall surface', alt_descriptions={}, title='wall texture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='popcorn', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall texture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=201, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000846', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_texture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_thermal_mass': SlotDefinition(name='wall_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the wall to provide inertia against temperature fluctuations. Generally this means concrete or concrete block that is either exposed or covered only with paint', alt_descriptions={}, title='wall thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=202, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000222', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_water_mold': SlotDefinition(name='wall_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on a wall', alt_descriptions={}, title='wall signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=203, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000844', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_feat_size': SlotDefinition(name='water_feat_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The size of the water feature', alt_descriptions={}, title='water feature size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water feature size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=204, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000223', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_feat_type': SlotDefinition(name='water_feat_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of water feature present within the building being sampled', alt_descriptions={}, title='water feature type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='stream', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water feature type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=205, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000847', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='water_feat_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'weekday': SlotDefinition(name='weekday', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The day of the week when sampling occurred', alt_descriptions={}, title='weekday', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Sunday', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['weekday'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=206, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000848', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='weekday_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_cond': SlotDefinition(name='window_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the window at the time of sampling', alt_descriptions={}, title='window condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rupture', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=207, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000849', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_cover': SlotDefinition(name='window_cover', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of window covering', alt_descriptions={}, title='window covering', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='curtains', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window covering'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=208, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000850', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_cover_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_horiz_pos': SlotDefinition(name='window_horiz_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The horizontal position of the window on the wall', alt_descriptions={}, title='window horizontal position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='middle', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window horizontal position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=209, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000851', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_horiz_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_loc': SlotDefinition(name='window_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the window within the room', alt_descriptions={}, title='window location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='west', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=210, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000852', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_mat': SlotDefinition(name='window_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material used to finish a window', alt_descriptions={}, title='window material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=211, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000853', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_open_freq': SlotDefinition(name='window_open_freq', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times windows are opened per week', alt_descriptions={}, title='window open frequency', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window open frequency'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=212, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000246', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_size': SlotDefinition(name='window_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='inch, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The window's length and width\", alt_descriptions={}, title='window area/size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window area/size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=213, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit} x {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000224', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_status': SlotDefinition(name='window_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Defines whether the windows were open or closed during environmental testing', alt_descriptions={}, title='window status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='open', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=214, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[closed|open]', singular_name=None, domain=None, slot_uri='MIXS:0000855', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_type': SlotDefinition(name='window_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of windows', alt_descriptions={}, title='window type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='fixed window', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=215, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000856', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_vert_pos': SlotDefinition(name='window_vert_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The vertical position of the window on the wall', alt_descriptions={}, title='window vertical position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='middle', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window vertical position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=216, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000857', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_vert_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_water_mold': SlotDefinition(name='window_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the window.', alt_descriptions={}, title='window signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=217, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000854', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:BuiltEnvInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'EmslInterface': ClassDefinition(name='EmslInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EmslInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='emsl dh_interface', alt_descriptions={}, title='Emsl', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['EmslInterface_emsl_store_temp', 'EmslInterface_project_id', 'EmslInterface_replicate_number', 'EmslInterface_sample_shipped', 'EmslInterface_sample_type', 'EmslInterface_technical_reps', 'emsl_store_temp', 'project_id', 'replicate_number', 'sample_shipped', 'sample_type', 'technical_reps', 'EmslInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'emsl_store_temp': SlotDefinition(name='emsl_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The temperature at which the sample should be stored upon delivery to EMSL', alt_descriptions={}, title='EMSL sample storage temperature, deg. C', deprecated=None, todos=[\"add 'see_alsos' with link to NEXUS info\"], notes=[], comments=['Enter a temperature in celsius. Numeric portion only.'], examples=[Example(value='-80', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'project_id': SlotDefinition(name='project_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Proposal IDs or names associated with dataset', alt_descriptions={}, title='project ID', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'replicate_number': SlotDefinition(name='replicate_number', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='If sending biological replicates, indicate the rep number here.', alt_descriptions={}, title='replicate number', deprecated=None, todos=[], notes=[], comments=['This will guide staff in ensuring your samples are block & randomized correctly'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_shipped': SlotDefinition(name='sample_shipped', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample sent to EMSL.', alt_descriptions={}, title='sample shipped amount', deprecated=None, todos=[], notes=[], comments=['This field is only required when completing metadata for samples being submitted to EMSL for analyses.'], examples=[Example(value='15 g', description=None, object=None), Example(value='100 uL', description=None, object=None), Example(value='5 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_type': SlotDefinition(name='sample_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of sample being submitted', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[\"This can vary from 'environmental package' if the sample is an extraction.\"], examples=[Example(value='water extracted soil', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sample_type_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'technical_reps': SlotDefinition(name='technical_reps', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='If sending technical replicates of the same sample, indicate the replicate count.', alt_descriptions={}, title='number technical replicate', deprecated=None, todos=[], notes=[], comments=['This field is only required when completing metadata for samples being submitted to EMSL for analyses.'], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:EmslInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HcrCoresInterface': ClassDefinition(name='HcrCoresInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrCoresInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='hcr_cores dh_interface', alt_descriptions={}, title='Hcr Cores', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['additional_info', 'alkalinity', 'alkalinity_method', 'ammonium', 'api', 'aromatics_pc', 'asphaltenes_pc', 'basin', 'benzene', 'calcium', 'chem_administration', 'chloride', 'collection_date', 'density', 'depos_env', 'depth', 'diss_carb_dioxide', 'diss_inorg_carb', 'diss_inorg_phosp', 'diss_iron', 'diss_org_carb', 'diss_oxygen_fluid', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'ethylbenzene', 'experimental_factor', 'field', 'geo_loc_name', 'hc_produced', 'hcr', 'hcr_fw_salinity', 'hcr_geol_age', 'hcr_pressure', 'hcr_temp', 'horizon_meth', 'lat_lon', 'lithology', 'magnesium', 'misc_param', 'nitrate', 'nitrite', 'org_count_qpcr_info', 'organism_count', 'owc_tvdss', 'oxy_stat_samp', 'permeability', 'ph', 'ph_meth', 'porosity', 'potassium', 'pour_point', 'pressure', 'reservoir', 'resins_pc', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_md', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'samp_subtype', 'samp_transport_cond', 'samp_tvdss', 'samp_type', 'samp_well_name', 'HcrCoresInterface_sample_link', 'saturates_pc', 'size_frac', 'sodium', 'specific_ecosystem', 'sr_dep_env', 'sr_geol_age', 'sr_kerog_type', 'sr_lithology', 'sulfate', 'sulfate_fw', 'sulfide', 'suspend_solids', 'tan', 'temp', 'toluene', 'tot_iron', 'tot_nitro', 'tot_phosp', 'tot_sulfur', 'tvdss_of_hcr_press', 'tvdss_of_hcr_temp', 'vfa', 'vfa_fw', 'viscosity', 'win', 'xylene', 'HcrCoresInterface_additional_info', 'HcrCoresInterface_alkalinity', 'HcrCoresInterface_alkalinity_method', 'HcrCoresInterface_ammonium', 'HcrCoresInterface_api', 'HcrCoresInterface_aromatics_pc', 'HcrCoresInterface_asphaltenes_pc', 'HcrCoresInterface_basin', 'HcrCoresInterface_benzene', 'HcrCoresInterface_calcium', 'HcrCoresInterface_chem_administration', 'HcrCoresInterface_chloride', 'HcrCoresInterface_collection_date', 'HcrCoresInterface_density', 'HcrCoresInterface_depos_env', 'HcrCoresInterface_depth', 'HcrCoresInterface_diss_carb_dioxide', 'HcrCoresInterface_diss_inorg_carb', 'HcrCoresInterface_diss_inorg_phosp', 'HcrCoresInterface_diss_iron', 'HcrCoresInterface_diss_org_carb', 'HcrCoresInterface_diss_oxygen_fluid', 'HcrCoresInterface_ecosystem', 'HcrCoresInterface_ecosystem_category', 'HcrCoresInterface_ecosystem_subtype', 'HcrCoresInterface_ecosystem_type', 'HcrCoresInterface_elev', 'HcrCoresInterface_env_broad_scale', 'HcrCoresInterface_env_local_scale', 'HcrCoresInterface_env_medium', 'HcrCoresInterface_env_package', 'HcrCoresInterface_ethylbenzene', 'HcrCoresInterface_experimental_factor', 'HcrCoresInterface_field', 'HcrCoresInterface_geo_loc_name', 'HcrCoresInterface_hc_produced', 'HcrCoresInterface_hcr', 'HcrCoresInterface_hcr_fw_salinity', 'HcrCoresInterface_hcr_geol_age', 'HcrCoresInterface_hcr_pressure', 'HcrCoresInterface_hcr_temp', 'HcrCoresInterface_horizon_meth', 'HcrCoresInterface_lat_lon', 'HcrCoresInterface_lithology', 'HcrCoresInterface_magnesium', 'HcrCoresInterface_misc_param', 'HcrCoresInterface_nitrate', 'HcrCoresInterface_nitrite', 'HcrCoresInterface_org_count_qpcr_info', 'HcrCoresInterface_organism_count', 'HcrCoresInterface_owc_tvdss', 'HcrCoresInterface_oxy_stat_samp', 'HcrCoresInterface_permeability', 'HcrCoresInterface_ph', 'HcrCoresInterface_ph_meth', 'HcrCoresInterface_porosity', 'HcrCoresInterface_potassium', 'HcrCoresInterface_pour_point', 'HcrCoresInterface_pressure', 'HcrCoresInterface_reservoir', 'HcrCoresInterface_resins_pc', 'HcrCoresInterface_salinity', 'HcrCoresInterface_samp_collec_device', 'HcrCoresInterface_samp_collec_method', 'HcrCoresInterface_samp_mat_process', 'HcrCoresInterface_samp_md', 'HcrCoresInterface_samp_size', 'HcrCoresInterface_samp_store_dur', 'HcrCoresInterface_samp_store_loc', 'HcrCoresInterface_samp_store_temp', 'HcrCoresInterface_samp_subtype', 'HcrCoresInterface_samp_transport_cond', 'HcrCoresInterface_samp_tvdss', 'HcrCoresInterface_samp_type', 'HcrCoresInterface_samp_well_name', 'HcrCoresInterface_saturates_pc', 'HcrCoresInterface_size_frac', 'HcrCoresInterface_sodium', 'HcrCoresInterface_specific_ecosystem', 'HcrCoresInterface_sr_dep_env', 'HcrCoresInterface_sr_geol_age', 'HcrCoresInterface_sr_kerog_type', 'HcrCoresInterface_sr_lithology', 'HcrCoresInterface_sulfate', 'HcrCoresInterface_sulfate_fw', 'HcrCoresInterface_sulfide', 'HcrCoresInterface_suspend_solids', 'HcrCoresInterface_tan', 'HcrCoresInterface_temp', 'HcrCoresInterface_toluene', 'HcrCoresInterface_tot_iron', 'HcrCoresInterface_tot_nitro', 'HcrCoresInterface_tot_phosp', 'HcrCoresInterface_tot_sulfur', 'HcrCoresInterface_tvdss_of_hcr_press', 'HcrCoresInterface_tvdss_of_hcr_temp', 'HcrCoresInterface_vfa', 'HcrCoresInterface_vfa_fw', 'HcrCoresInterface_viscosity', 'HcrCoresInterface_win', 'HcrCoresInterface_xylene', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'additional_info': SlotDefinition(name='additional_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Information that doesn't fit anywhere else. Can also be used to propose new entries for fields with controlled vocabulary\", alt_descriptions={}, title='additional info', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['additional info'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=290, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000300', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'api': SlotDefinition(name='api', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degrees API', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1¬∞ API)', alt_descriptions={}, title='API gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['API gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=291, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000157', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aromatics_pc': SlotDefinition(name='aromatics_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='aromatics wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aromatics wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=292, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000133', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asphaltenes_pc': SlotDefinition(name='asphaltenes_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='asphaltenes wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['asphaltenes wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=293, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000135', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'basin': SlotDefinition(name='basin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the basin (e.g. Campos)', alt_descriptions={}, title='basin name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['basin name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=294, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000290', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'benzene': SlotDefinition(name='benzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of benzene in the sample', alt_descriptions={}, title='benzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['benzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=295, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000153', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depos_env': SlotDefinition(name='depos_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Continental - Alluvial', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=304, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000992', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='depos_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_iron': SlotDefinition(name='diss_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved iron in the sample', alt_descriptions={}, title='dissolved iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=305, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000139', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen_fluid': SlotDefinition(name='diss_oxygen_fluid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).', alt_descriptions={}, title='dissolved oxygen in fluids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen in fluids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=306, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000438', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ethylbenzene': SlotDefinition(name='ethylbenzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ethylbenzene in the sample', alt_descriptions={}, title='ethylbenzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ethylbenzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=309, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000155', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'field': SlotDefinition(name='field', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the hydrocarbon field (e.g. Albacora)', alt_descriptions={}, title='field name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['field name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=310, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000291', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hc_produced': SlotDefinition(name='hc_produced', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon type produced', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Gas', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon type produced'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=313, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000989', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hc_produced_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr': SlotDefinition(name='hcr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main Hydrocarbon Resource type. The term \"Hydrocarbon Resource\" HCR defined as a natural environmental feature containing large amounts of hydrocarbons at high concentrations potentially suitable for commercial exploitation. This term should not be confused with the Hydrocarbon Occurrence term which also includes hydrocarbon-rich environments with currently limited commercial interest such as seeps, outcrops, gas hydrates etc. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Oil Sand', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=314, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000988', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_fw_salinity': SlotDefinition(name='hcr_fw_salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS', alt_descriptions={}, title='formation water salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['formation water salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=315, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000406', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_geol_age': SlotDefinition(name='hcr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=316, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000993', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_pressure': SlotDefinition(name='hcr_pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere, kilopascal', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original pressure of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=317, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000395', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_temp': SlotDefinition(name='hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original temperature of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='150-295 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=318, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000393', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lithology': SlotDefinition(name='lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Volcanic', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=336, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000990', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_count_qpcr_info': SlotDefinition(name='org_count_qpcr_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gene name;FWD:forward primer sequence;REV:reverse primer sequence;initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per gram (or ml or cm^2)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='If qpcr was used for the cell count, the target gene name, the primer sequence and the cycling conditions should also be provided. (Example: 16S rrna; FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min; annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min; 30 cycles)', alt_descriptions={}, title='organism count qPCR information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count qPCR information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=337, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};FWD:{dna};REV:{dna};initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', singular_name=None, domain=None, slot_uri='MIXS:0000099', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owc_tvdss': SlotDefinition(name='owc_tvdss', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Depth of the original oil water contact (OWC) zone (average) (m TVDSS)', alt_descriptions={}, title='oil water contact depth', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['oil water contact depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=339, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000405', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permeability': SlotDefinition(name='permeability', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mD', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the ability of a hydrocarbon resource to allow fluids to pass through it. (Additional information: https://en.wikipedia.org/wiki/Permeability_(earth_sciences))', alt_descriptions={}, title='permeability', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['permeability'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=340, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} - {integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000404', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'porosity': SlotDefinition(name='porosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Porosity of deposited sediment is volume of voids divided by the total volume of sample', alt_descriptions={}, title='porosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['porosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000211', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pour_point': SlotDefinition(name='pour_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high¬†pour point¬†is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)', alt_descriptions={}, title='pour point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pour point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=341, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000127', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reservoir': SlotDefinition(name='reservoir', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the reservoir (e.g. Carapebus)', alt_descriptions={}, title='reservoir name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reservoir name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=347, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000303', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'resins_pc': SlotDefinition(name='resins_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='resins wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['resins wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=348, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000134', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_md': SlotDefinition(name='samp_md', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='In non deviated well, measured depth is equal to the true vertical depth, TVD (TVD=TVDSS plus the reference or datum it refers to). In deviated wells, the MD is the length of trajectory of the borehole measured from the same reference or datum. Common datums used are ground level (GL), drilling rig floor (DF), rotary table (RT), kelly bushing (KB) and mean sea level (MSL). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample measured depth', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1534 meter;MSL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample measured depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=351, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000413', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_subtype': SlotDefinition(name='samp_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of sample sub-type. For example if \"sample type\" is \"Produced Water\" then subtype could be \"Oil Phase\" or \"Water Phase\". If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample subtype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biofilm', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample subtype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=354, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000999', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_subtype_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_transport_cond': SlotDefinition(name='samp_transport_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='days;degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sample transport duration (in days or hrs) and temperature the sample was exposed to (e.g. 5.5 days; 20 ¬∞C)', alt_descriptions={}, title='sample transport conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 days;-20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample transport conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=355, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000410', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_tvdss': SlotDefinition(name='samp_tvdss', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Depth of the sample i.e. The vertical distance between the sea level and the sampled position in the subsurface. Depth can be reported as an interval for subsurface samples e.g. 1325.75-1362.25 m', alt_descriptions={}, title='sample true vertical depth subsea', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample true vertical depth subsea'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=356, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000409', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_type': SlotDefinition(name='samp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='GENEPIO:0001246', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material from which the sample was obtained. For the Hydrocarbon package, samples include types like core, rock trimmings, drill cuttings, piping section, coupon, pigging debris, solid deposit, produced fluid, produced water, injected water, swabs, etc. For the Food Package, samples are usually categorized as food, body products or tissues, or environmental material. This field accepts terms listed under environmental specimen (http://purl.obolibrary.org/obo/GENEPIO_0001246).', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='built environment sample [GENEPIO:0001248]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=357, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000998', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_well_name': SlotDefinition(name='samp_well_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the well (e.g. BXA1123) where sample was taken', alt_descriptions={}, title='sample well name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample well name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=358, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000296', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'saturates_pc': SlotDefinition(name='saturates_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='saturates wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['saturates wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=359, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000131', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_dep_env': SlotDefinition(name='sr_dep_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Source rock depositional environment (https://en.wikipedia.org/wiki/Source_rock). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Marine', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=366, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000996', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_dep_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_geol_age': SlotDefinition(name='sr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of source rock (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=367, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000997', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_kerog_type': SlotDefinition(name='sr_kerog_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Origin of kerogen. Type I: Algal (aquatic), Type II: planktonic and soft plant material (aquatic or terrestrial), Type III: terrestrial woody/ fibrous plant material (terrestrial), Type IV: oxidized recycled woody debris (terrestrial) (additional information: https://en.wikipedia.org/wiki/Kerogen). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock kerogen type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Type IV', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock kerogen type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=368, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000994', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_kerog_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_lithology': SlotDefinition(name='sr_lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Lithology of source rock (https://en.wikipedia.org/wiki/Source_rock). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Coal', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=369, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000995', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate_fw': SlotDefinition(name='sulfate_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original sulfate concentration in the hydrocarbon resource', alt_descriptions={}, title='sulfate in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=370, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000407', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tan': SlotDefinition(name='tan', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total Acid Number¬†(TAN) is a measurement of acidity that is determined by the amount of¬†potassium hydroxide¬†in milligrams that is needed to neutralize the acids in one gram of oil.¬†It is an important quality measurement of¬†crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)', alt_descriptions={}, title='total acid number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total acid number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=373, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000120', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'toluene': SlotDefinition(name='toluene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of toluene in the sample', alt_descriptions={}, title='toluene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['toluene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=375, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000154', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_iron': SlotDefinition(name='tot_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, milligram per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total iron in the sample', alt_descriptions={}, title='total iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=376, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000105', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_sulfur': SlotDefinition(name='tot_sulfur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total sulfur in the sample', alt_descriptions={}, title='total sulfur', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total sulfur'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=379, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000419', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_press': SlotDefinition(name='tvdss_of_hcr_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=380, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000397', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_temp': SlotDefinition(name='tvdss_of_hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=381, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000394', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa': SlotDefinition(name='vfa', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of Volatile Fatty Acids in the sample', alt_descriptions={}, title='volatile fatty acids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile fatty acids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=382, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000152', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa_fw': SlotDefinition(name='vfa_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original volatile fatty acid concentration in the hydrocarbon resource', alt_descriptions={}, title='vfa in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['vfa in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=383, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000408', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'viscosity': SlotDefinition(name='viscosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cP at degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"A measure of oil's resistance¬†to gradual deformation by¬†shear stress¬†or¬†tensile stress (e.g. 3.5 cp; 100 ¬∞C)\", alt_descriptions={}, title='viscosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['viscosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=384, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000126', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'win': SlotDefinition(name='win', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier of a well or wellbore. This is part of the Global Framework for Well Identification initiative which is compiled by the Professional Petroleum Data Management Association (PPDM) in an effort to improve well identification systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)', alt_descriptions={}, title='well identification number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['well identification number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=388, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000297', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'xylene': SlotDefinition(name='xylene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of xylene in the sample', alt_descriptions={}, title='xylene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xylene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=389, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000156', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HcrCoresInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HcrFluidsSwabsInterface': ClassDefinition(name='HcrFluidsSwabsInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrFluidsSwabsInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='hcr_fluids_swabs dh_interface', alt_descriptions={}, title='Hcr Fluids Swabs', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['add_recov_method', 'additional_info', 'alkalinity', 'alkalinity_method', 'ammonium', 'api', 'aromatics_pc', 'asphaltenes_pc', 'basin', 'benzene', 'biocide', 'biocide_admin_method', 'calcium', 'chem_administration', 'chem_treat_method', 'chem_treatment', 'chloride', 'collection_date', 'density', 'depos_env', 'depth', 'diss_carb_dioxide', 'diss_inorg_carb', 'diss_inorg_phosp', 'diss_iron', 'diss_org_carb', 'diss_oxygen_fluid', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'ethylbenzene', 'experimental_factor', 'field', 'geo_loc_name', 'hc_produced', 'hcr', 'hcr_fw_salinity', 'hcr_geol_age', 'hcr_pressure', 'hcr_temp', 'horizon_meth', 'iw_bt_date_well', 'iwf', 'lat_lon', 'lithology', 'magnesium', 'misc_param', 'nitrate', 'nitrite', 'org_count_qpcr_info', 'organism_count', 'oxy_stat_samp', 'ph', 'ph_meth', 'potassium', 'pour_point', 'pressure', 'prod_rate', 'prod_start_date', 'reservoir', 'resins_pc', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_collect_point', 'samp_loc_corr_rate', 'samp_mat_process', 'samp_preserv', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'samp_subtype', 'samp_transport_cond', 'samp_type', 'samp_well_name', 'HcrFluidsSwabsInterface_sample_link', 'saturates_pc', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfate_fw', 'sulfide', 'suspend_solids', 'tan', 'temp', 'toluene', 'tot_iron', 'tot_nitro', 'tot_phosp', 'tot_sulfur', 'tvdss_of_hcr_press', 'tvdss_of_hcr_temp', 'vfa', 'vfa_fw', 'viscosity', 'water_cut', 'water_prod_rate', 'win', 'xylene', 'HcrFluidsSwabsInterface_add_recov_method', 'HcrFluidsSwabsInterface_additional_info', 'HcrFluidsSwabsInterface_alkalinity', 'HcrFluidsSwabsInterface_alkalinity_method', 'HcrFluidsSwabsInterface_ammonium', 'HcrFluidsSwabsInterface_api', 'HcrFluidsSwabsInterface_aromatics_pc', 'HcrFluidsSwabsInterface_asphaltenes_pc', 'HcrFluidsSwabsInterface_basin', 'HcrFluidsSwabsInterface_benzene', 'HcrFluidsSwabsInterface_biocide', 'HcrFluidsSwabsInterface_biocide_admin_method', 'HcrFluidsSwabsInterface_calcium', 'HcrFluidsSwabsInterface_chem_administration', 'HcrFluidsSwabsInterface_chem_treat_method', 'HcrFluidsSwabsInterface_chem_treatment', 'HcrFluidsSwabsInterface_chloride', 'HcrFluidsSwabsInterface_collection_date', 'HcrFluidsSwabsInterface_density', 'HcrFluidsSwabsInterface_depos_env', 'HcrFluidsSwabsInterface_depth', 'HcrFluidsSwabsInterface_diss_carb_dioxide', 'HcrFluidsSwabsInterface_diss_inorg_carb', 'HcrFluidsSwabsInterface_diss_inorg_phosp', 'HcrFluidsSwabsInterface_diss_iron', 'HcrFluidsSwabsInterface_diss_org_carb', 'HcrFluidsSwabsInterface_diss_oxygen_fluid', 'HcrFluidsSwabsInterface_ecosystem', 'HcrFluidsSwabsInterface_ecosystem_category', 'HcrFluidsSwabsInterface_ecosystem_subtype', 'HcrFluidsSwabsInterface_ecosystem_type', 'HcrFluidsSwabsInterface_elev', 'HcrFluidsSwabsInterface_env_broad_scale', 'HcrFluidsSwabsInterface_env_local_scale', 'HcrFluidsSwabsInterface_env_medium', 'HcrFluidsSwabsInterface_env_package', 'HcrFluidsSwabsInterface_ethylbenzene', 'HcrFluidsSwabsInterface_experimental_factor', 'HcrFluidsSwabsInterface_field', 'HcrFluidsSwabsInterface_geo_loc_name', 'HcrFluidsSwabsInterface_hc_produced', 'HcrFluidsSwabsInterface_hcr', 'HcrFluidsSwabsInterface_hcr_fw_salinity', 'HcrFluidsSwabsInterface_hcr_geol_age', 'HcrFluidsSwabsInterface_hcr_pressure', 'HcrFluidsSwabsInterface_hcr_temp', 'HcrFluidsSwabsInterface_horizon_meth', 'HcrFluidsSwabsInterface_iw_bt_date_well', 'HcrFluidsSwabsInterface_iwf', 'HcrFluidsSwabsInterface_lat_lon', 'HcrFluidsSwabsInterface_lithology', 'HcrFluidsSwabsInterface_magnesium', 'HcrFluidsSwabsInterface_misc_param', 'HcrFluidsSwabsInterface_nitrate', 'HcrFluidsSwabsInterface_nitrite', 'HcrFluidsSwabsInterface_org_count_qpcr_info', 'HcrFluidsSwabsInterface_organism_count', 'HcrFluidsSwabsInterface_oxy_stat_samp', 'HcrFluidsSwabsInterface_ph', 'HcrFluidsSwabsInterface_ph_meth', 'HcrFluidsSwabsInterface_potassium', 'HcrFluidsSwabsInterface_pour_point', 'HcrFluidsSwabsInterface_pressure', 'HcrFluidsSwabsInterface_prod_rate', 'HcrFluidsSwabsInterface_prod_start_date', 'HcrFluidsSwabsInterface_reservoir', 'HcrFluidsSwabsInterface_resins_pc', 'HcrFluidsSwabsInterface_salinity', 'HcrFluidsSwabsInterface_samp_collec_device', 'HcrFluidsSwabsInterface_samp_collec_method', 'HcrFluidsSwabsInterface_samp_collect_point', 'HcrFluidsSwabsInterface_samp_loc_corr_rate', 'HcrFluidsSwabsInterface_samp_mat_process', 'HcrFluidsSwabsInterface_samp_preserv', 'HcrFluidsSwabsInterface_samp_size', 'HcrFluidsSwabsInterface_samp_store_dur', 'HcrFluidsSwabsInterface_samp_store_loc', 'HcrFluidsSwabsInterface_samp_store_temp', 'HcrFluidsSwabsInterface_samp_subtype', 'HcrFluidsSwabsInterface_samp_transport_cond', 'HcrFluidsSwabsInterface_samp_type', 'HcrFluidsSwabsInterface_samp_well_name', 'HcrFluidsSwabsInterface_saturates_pc', 'HcrFluidsSwabsInterface_size_frac', 'HcrFluidsSwabsInterface_sodium', 'HcrFluidsSwabsInterface_specific_ecosystem', 'HcrFluidsSwabsInterface_sulfate', 'HcrFluidsSwabsInterface_sulfate_fw', 'HcrFluidsSwabsInterface_sulfide', 'HcrFluidsSwabsInterface_suspend_solids', 'HcrFluidsSwabsInterface_tan', 'HcrFluidsSwabsInterface_temp', 'HcrFluidsSwabsInterface_toluene', 'HcrFluidsSwabsInterface_tot_iron', 'HcrFluidsSwabsInterface_tot_nitro', 'HcrFluidsSwabsInterface_tot_phosp', 'HcrFluidsSwabsInterface_tot_sulfur', 'HcrFluidsSwabsInterface_tvdss_of_hcr_press', 'HcrFluidsSwabsInterface_tvdss_of_hcr_temp', 'HcrFluidsSwabsInterface_vfa', 'HcrFluidsSwabsInterface_vfa_fw', 'HcrFluidsSwabsInterface_viscosity', 'HcrFluidsSwabsInterface_water_cut', 'HcrFluidsSwabsInterface_water_prod_rate', 'HcrFluidsSwabsInterface_win', 'HcrFluidsSwabsInterface_xylene', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'add_recov_method': SlotDefinition(name='add_recov_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Additional (i.e. Secondary, tertiary, etc.) recovery methods deployed for increase of hydrocarbon recovery from resource and start date for each one of them. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='secondary and tertiary recovery methods and start date', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Polymer Addition;2018-06-21T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['secondary and tertiary recovery methods and start date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=289, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'additional_info': SlotDefinition(name='additional_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Information that doesn't fit anywhere else. Can also be used to propose new entries for fields with controlled vocabulary\", alt_descriptions={}, title='additional info', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['additional info'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=290, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000300', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'api': SlotDefinition(name='api', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degrees API', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1¬∞ API)', alt_descriptions={}, title='API gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['API gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=291, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000157', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aromatics_pc': SlotDefinition(name='aromatics_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='aromatics wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aromatics wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=292, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000133', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asphaltenes_pc': SlotDefinition(name='asphaltenes_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='asphaltenes wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['asphaltenes wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=293, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000135', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'basin': SlotDefinition(name='basin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the basin (e.g. Campos)', alt_descriptions={}, title='basin name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['basin name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=294, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000290', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'benzene': SlotDefinition(name='benzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of benzene in the sample', alt_descriptions={}, title='benzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['benzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=295, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000153', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biocide': SlotDefinition(name='biocide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;name;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of biocides (commercial name of product and supplier) and date of administration', alt_descriptions={}, title='biocide administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ALPHA 1427;Baker Hughes;2008-01-23', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biocide administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=297, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0001011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biocide_admin_method': SlotDefinition(name='biocide_admin_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;frequency;duration;duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method of biocide administration (dose, frequency, duration, time elapsed between last biociding and sampling) (e.g. 150 mg/l; weekly; 4 hr; 3 days)', alt_descriptions={}, title='biocide administration method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biocide administration method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=298, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000456', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_treat_method': SlotDefinition(name='chem_treat_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;frequency;duration;duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method of chemical administration(dose, frequency, duration, time elapsed between administration and sampling) (e.g. 50 mg/l; twice a week; 1 hr; 0 days)', alt_descriptions={}, title='chemical treatment method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical treatment method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=302, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration};{duration};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000457', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_treatment': SlotDefinition(name='chem_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;name;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of chemical compounds administered upstream the sampling location where sampling occurred (e.g. Glycols, H2S scavenger, corrosion and scale inhibitors, demulsifiers, and other production chemicals etc.). The commercial name of the product and name of the supplier should be provided. The date of administration should also be included', alt_descriptions={}, title='chemical treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ACCENT 1125;DOW;2010-11-17', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=303, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0001012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depos_env': SlotDefinition(name='depos_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Continental - Alluvial', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=304, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000992', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='depos_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_iron': SlotDefinition(name='diss_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved iron in the sample', alt_descriptions={}, title='dissolved iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=305, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000139', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen_fluid': SlotDefinition(name='diss_oxygen_fluid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).', alt_descriptions={}, title='dissolved oxygen in fluids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen in fluids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=306, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000438', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ethylbenzene': SlotDefinition(name='ethylbenzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ethylbenzene in the sample', alt_descriptions={}, title='ethylbenzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ethylbenzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=309, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000155', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'field': SlotDefinition(name='field', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the hydrocarbon field (e.g. Albacora)', alt_descriptions={}, title='field name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['field name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=310, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000291', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hc_produced': SlotDefinition(name='hc_produced', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon type produced', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Gas', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon type produced'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=313, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000989', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hc_produced_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr': SlotDefinition(name='hcr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main Hydrocarbon Resource type. The term \"Hydrocarbon Resource\" HCR defined as a natural environmental feature containing large amounts of hydrocarbons at high concentrations potentially suitable for commercial exploitation. This term should not be confused with the Hydrocarbon Occurrence term which also includes hydrocarbon-rich environments with currently limited commercial interest such as seeps, outcrops, gas hydrates etc. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Oil Sand', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=314, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000988', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_fw_salinity': SlotDefinition(name='hcr_fw_salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS', alt_descriptions={}, title='formation water salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['formation water salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=315, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000406', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_geol_age': SlotDefinition(name='hcr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=316, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000993', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_pressure': SlotDefinition(name='hcr_pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere, kilopascal', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original pressure of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=317, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000395', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_temp': SlotDefinition(name='hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original temperature of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='150-295 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=318, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000393', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iw_bt_date_well': SlotDefinition(name='iw_bt_date_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Injection water breakthrough date per well following a secondary and/or tertiary recovery', alt_descriptions={}, title='injection water breakthrough date of specific well', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['injection water breakthrough date of specific well'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=334, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iwf': SlotDefinition(name='iwf', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Proportion of the produced fluids derived from injected water at the time of sampling. (e.g. 87%)', alt_descriptions={}, title='injection water fraction', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['injection water fraction'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=335, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000455', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lithology': SlotDefinition(name='lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Volcanic', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=336, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000990', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_count_qpcr_info': SlotDefinition(name='org_count_qpcr_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gene name;FWD:forward primer sequence;REV:reverse primer sequence;initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per gram (or ml or cm^2)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='If qpcr was used for the cell count, the target gene name, the primer sequence and the cycling conditions should also be provided. (Example: 16S rrna; FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min; annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min; 30 cycles)', alt_descriptions={}, title='organism count qPCR information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count qPCR information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=337, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};FWD:{dna};REV:{dna};initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', singular_name=None, domain=None, slot_uri='MIXS:0000099', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pour_point': SlotDefinition(name='pour_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high¬†pour point¬†is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)', alt_descriptions={}, title='pour point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pour point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=341, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000127', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prod_rate': SlotDefinition(name='prod_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Oil and/or gas production rates per well (e.g. 524 m3 / day)', alt_descriptions={}, title='production rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['production rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=344, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000452', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prod_start_date': SlotDefinition(name='prod_start_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Date of field's first production\", alt_descriptions={}, title='production start date', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['production start date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=345, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reservoir': SlotDefinition(name='reservoir', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the reservoir (e.g. Carapebus)', alt_descriptions={}, title='reservoir name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reservoir name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=347, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000303', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'resins_pc': SlotDefinition(name='resins_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='resins wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['resins wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=348, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000134', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collect_point': SlotDefinition(name='samp_collect_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sampling point on the asset were sample was collected (e.g. Wellhead, storage tank, separator, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample collection point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='well', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=349, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001015', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_collect_point_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_loc_corr_rate': SlotDefinition(name='samp_loc_corr_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter per year', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Metal corrosion rate is the speed of metal deterioration due to environmental conditions. As environmental conditions change corrosion rates change accordingly. Therefore, long term corrosion rates are generally more informative than short term rates and for that reason they are preferred during reporting. In the case of suspected MIC, corrosion rate measurements at the time of sampling might provide insights into the involvement of certain microbial community members in MIC as well as potential microbial interplays', alt_descriptions={}, title='corrosion rate at sample location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['corrosion rate at sample location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=350, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000136', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_preserv': SlotDefinition(name='samp_preserv', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliliter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Preservative added to the sample (e.g. Rnalater, alcohol, formaldehyde, etc.). Where appropriate include volume added (e.g. Rnalater; 2 ml)', alt_descriptions={}, title='preservative added to sample', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['preservative added to sample'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=352, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000463', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_subtype': SlotDefinition(name='samp_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of sample sub-type. For example if \"sample type\" is \"Produced Water\" then subtype could be \"Oil Phase\" or \"Water Phase\". If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample subtype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biofilm', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample subtype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=354, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000999', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_subtype_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_transport_cond': SlotDefinition(name='samp_transport_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='days;degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sample transport duration (in days or hrs) and temperature the sample was exposed to (e.g. 5.5 days; 20 ¬∞C)', alt_descriptions={}, title='sample transport conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 days;-20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample transport conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=355, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000410', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_type': SlotDefinition(name='samp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='GENEPIO:0001246', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material from which the sample was obtained. For the Hydrocarbon package, samples include types like core, rock trimmings, drill cuttings, piping section, coupon, pigging debris, solid deposit, produced fluid, produced water, injected water, swabs, etc. For the Food Package, samples are usually categorized as food, body products or tissues, or environmental material. This field accepts terms listed under environmental specimen (http://purl.obolibrary.org/obo/GENEPIO_0001246).', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='built environment sample [GENEPIO:0001248]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=357, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000998', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_well_name': SlotDefinition(name='samp_well_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the well (e.g. BXA1123) where sample was taken', alt_descriptions={}, title='sample well name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample well name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=358, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000296', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'saturates_pc': SlotDefinition(name='saturates_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='saturates wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['saturates wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=359, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000131', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate_fw': SlotDefinition(name='sulfate_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original sulfate concentration in the hydrocarbon resource', alt_descriptions={}, title='sulfate in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=370, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000407', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tan': SlotDefinition(name='tan', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total Acid Number¬†(TAN) is a measurement of acidity that is determined by the amount of¬†potassium hydroxide¬†in milligrams that is needed to neutralize the acids in one gram of oil.¬†It is an important quality measurement of¬†crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)', alt_descriptions={}, title='total acid number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total acid number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=373, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000120', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'toluene': SlotDefinition(name='toluene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of toluene in the sample', alt_descriptions={}, title='toluene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['toluene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=375, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000154', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_iron': SlotDefinition(name='tot_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, milligram per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total iron in the sample', alt_descriptions={}, title='total iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=376, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000105', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_sulfur': SlotDefinition(name='tot_sulfur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total sulfur in the sample', alt_descriptions={}, title='total sulfur', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total sulfur'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=379, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000419', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_press': SlotDefinition(name='tvdss_of_hcr_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=380, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000397', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_temp': SlotDefinition(name='tvdss_of_hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=381, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000394', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa': SlotDefinition(name='vfa', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of Volatile Fatty Acids in the sample', alt_descriptions={}, title='volatile fatty acids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile fatty acids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=382, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000152', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa_fw': SlotDefinition(name='vfa_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original volatile fatty acid concentration in the hydrocarbon resource', alt_descriptions={}, title='vfa in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['vfa in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=383, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000408', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'viscosity': SlotDefinition(name='viscosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cP at degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"A measure of oil's resistance¬†to gradual deformation by¬†shear stress¬†or¬†tensile stress (e.g. 3.5 cp; 100 ¬∞C)\", alt_descriptions={}, title='viscosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['viscosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=384, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000126', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_cut': SlotDefinition(name='water_cut', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Current amount of water (%) in a produced fluid stream; or the average of the combined streams', alt_descriptions={}, title='water cut', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water cut'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=386, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000454', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_prod_rate': SlotDefinition(name='water_prod_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Water production rates per well (e.g. 987 m3 / day)', alt_descriptions={}, title='water production rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water production rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=387, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000453', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'win': SlotDefinition(name='win', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier of a well or wellbore. This is part of the Global Framework for Well Identification initiative which is compiled by the Professional Petroleum Data Management Association (PPDM) in an effort to improve well identification systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)', alt_descriptions={}, title='well identification number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['well identification number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=388, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000297', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'xylene': SlotDefinition(name='xylene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of xylene in the sample', alt_descriptions={}, title='xylene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xylene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=389, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000156', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HcrFluidsSwabsInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HostAssociatedInterface': ClassDefinition(name='HostAssociatedInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HostAssociatedInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='host_associated dh_interface', alt_descriptions={}, title='Host Associated', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alt', 'ances_data', 'biol_stat', 'blood_press_diast', 'blood_press_syst', 'chem_administration', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'genetic_mod', 'geo_loc_name', 'gravidity', 'horizon_meth', 'host_age', 'host_body_habitat', 'host_body_product', 'host_body_site', 'host_body_temp', 'host_color', 'host_common_name', 'host_diet', 'host_dry_mass', 'host_family_relation', 'host_genotype', 'host_growth_cond', 'host_height', 'host_last_meal', 'host_length', 'host_life_stage', 'host_phenotype', 'host_sex', 'host_shape', 'host_subject_id', 'host_subspecf_genlin', 'host_substrate', 'host_symbiont', 'host_taxid', 'host_tot_mass', 'lat_lon', 'misc_param', 'organism_count', 'oxy_stat_samp', 'perturbation', 'salinity', 'samp_capt_status', 'samp_collec_device', 'samp_collec_method', 'samp_dis_stage', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'HostAssociatedInterface_sample_link', 'size_frac', 'specific_ecosystem', 'temp', 'HostAssociatedInterface_alt', 'HostAssociatedInterface_ances_data', 'HostAssociatedInterface_biol_stat', 'HostAssociatedInterface_blood_press_diast', 'HostAssociatedInterface_blood_press_syst', 'HostAssociatedInterface_chem_administration', 'HostAssociatedInterface_collection_date', 'HostAssociatedInterface_depth', 'HostAssociatedInterface_ecosystem', 'HostAssociatedInterface_ecosystem_category', 'HostAssociatedInterface_ecosystem_subtype', 'HostAssociatedInterface_ecosystem_type', 'HostAssociatedInterface_elev', 'HostAssociatedInterface_env_broad_scale', 'HostAssociatedInterface_env_local_scale', 'HostAssociatedInterface_env_medium', 'HostAssociatedInterface_env_package', 'HostAssociatedInterface_experimental_factor', 'HostAssociatedInterface_genetic_mod', 'HostAssociatedInterface_geo_loc_name', 'HostAssociatedInterface_gravidity', 'HostAssociatedInterface_horizon_meth', 'HostAssociatedInterface_host_age', 'HostAssociatedInterface_host_body_habitat', 'HostAssociatedInterface_host_body_product', 'HostAssociatedInterface_host_body_site', 'HostAssociatedInterface_host_body_temp', 'HostAssociatedInterface_host_color', 'HostAssociatedInterface_host_common_name', 'HostAssociatedInterface_host_diet', 'HostAssociatedInterface_host_dry_mass', 'HostAssociatedInterface_host_family_relation', 'HostAssociatedInterface_host_genotype', 'HostAssociatedInterface_host_growth_cond', 'HostAssociatedInterface_host_height', 'HostAssociatedInterface_host_last_meal', 'HostAssociatedInterface_host_length', 'HostAssociatedInterface_host_life_stage', 'HostAssociatedInterface_host_phenotype', 'HostAssociatedInterface_host_sex', 'HostAssociatedInterface_host_shape', 'HostAssociatedInterface_host_subject_id', 'HostAssociatedInterface_host_subspecf_genlin', 'HostAssociatedInterface_host_substrate', 'HostAssociatedInterface_host_symbiont', 'HostAssociatedInterface_host_taxid', 'HostAssociatedInterface_host_tot_mass', 'HostAssociatedInterface_lat_lon', 'HostAssociatedInterface_misc_param', 'HostAssociatedInterface_organism_count', 'HostAssociatedInterface_oxy_stat_samp', 'HostAssociatedInterface_perturbation', 'HostAssociatedInterface_salinity', 'HostAssociatedInterface_samp_capt_status', 'HostAssociatedInterface_samp_collec_device', 'HostAssociatedInterface_samp_collec_method', 'HostAssociatedInterface_samp_dis_stage', 'HostAssociatedInterface_samp_mat_process', 'HostAssociatedInterface_samp_size', 'HostAssociatedInterface_samp_store_dur', 'HostAssociatedInterface_samp_store_loc', 'HostAssociatedInterface_samp_store_temp', 'HostAssociatedInterface_size_frac', 'HostAssociatedInterface_specific_ecosystem', 'HostAssociatedInterface_temp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ances_data': SlotDefinition(name='ances_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about either pedigree or other ancestral information description (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A x B) x B] x B)', alt_descriptions={}, title='ancestral data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A/3*B', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestral data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=237, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000247', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biol_stat': SlotDefinition(name='biol_stat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The level of genome modification.', alt_descriptions={}, title='biological status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='natural', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biological status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=239, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000858', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biol_stat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'blood_press_diast': SlotDefinition(name='blood_press_diast', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter mercury', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Resting diastolic blood pressure, measured as mm mercury', alt_descriptions={}, title='host blood pressure diastolic', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host blood pressure diastolic'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=299, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000258', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'blood_press_syst': SlotDefinition(name='blood_press_syst', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter mercury', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Resting systolic blood pressure, measured as mm mercury', alt_descriptions={}, title='host blood pressure systolic', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host blood pressure systolic'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=300, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000259', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'genetic_mod': SlotDefinition(name='genetic_mod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection', alt_descriptions={}, title='genetic modification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aox1A transgenic', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['genetic modification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=244, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000859', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gravidity': SlotDefinition(name='gravidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gravidity status;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Whether or not subject is gravid, and if yes date due or date post-conception, specifying which is used', alt_descriptions={}, title='gravidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='yes;due date:2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gravidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=312, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{boolean};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000875', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_age': SlotDefinition(name='host_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year, day, hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees', alt_descriptions={}, title='host age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 days', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=249, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000255', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_habitat': SlotDefinition(name='host_body_habitat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original body habitat where the sample was obtained from', alt_descriptions={}, title='host body habitat', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nasopharynx', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body habitat'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=319, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000866', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_product': SlotDefinition(name='host_body_product', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='FMA or UBERON', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Substance produced by the body, e.g. Stool, mucus, where the sample was obtained from. For foundational model of anatomy ontology (fma) or Uber-anatomy ontology (UBERON) terms, please see https://www.ebi.ac.uk/ols/ontologies/fma or https://www.ebi.ac.uk/ols/ontologies/uberon', alt_descriptions={}, title='host body product', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Portion of mucus [fma66938]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body product'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=320, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000888', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_site': SlotDefinition(name='host_body_site', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='FMA or UBERON', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of body site where the sample was obtained from, such as a specific organ or tissue (tongue, lung etc...). For foundational model of anatomy ontology (fma) (v 4.11.0) or Uber-anatomy ontology (UBERON) (v releases/2014-06-15) terms, please see http://purl.bioontology.org/ontology/FMA or http://purl.bioontology.org/ontology/UBERON', alt_descriptions={}, title='host body site', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='gill [UBERON:0002535]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body site'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=321, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000867', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_temp': SlotDefinition(name='host_body_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Core body temperature of the host when sample was collected', alt_descriptions={}, title='host body temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=322, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000274', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_color': SlotDefinition(name='host_color', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='color', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The color of host', alt_descriptions={}, title='host color', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host color'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=323, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000260', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_common_name': SlotDefinition(name='host_common_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Common name of the host.', alt_descriptions={}, title='host common name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='human', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host common name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=250, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000248', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_diet': SlotDefinition(name='host_diet', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diet type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of diet depending on the host, for animals omnivore, herbivore etc., for humans high-fat, meditteranean etc.; can include multiple diet types', alt_descriptions={}, title='host diet', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='herbivore', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host diet'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=324, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000869', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_dry_mass': SlotDefinition(name='host_dry_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of dry mass', alt_descriptions={}, title='host dry mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host dry mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=251, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000257', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_family_relation': SlotDefinition(name='host_family_relation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='relationship type;arbitrary identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Familial relationships to other hosts in the same study; can include multiple relationships', alt_descriptions={}, title='host family relationship', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='offspring;Mussel25', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host family relationship'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=325, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text}', singular_name=None, domain=None, slot_uri='MIXS:0000872', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_genotype': SlotDefinition(name='host_genotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='genotype', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Observed genotype', alt_descriptions={}, title='host genotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='C57BL/6', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host genotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=252, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000365', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_growth_cond': SlotDefinition(name='host_growth_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Literature reference giving growth conditions of the host', alt_descriptions={}, title='host growth conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://academic.oup.com/icesjms/article/68/2/349/617247', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host growth conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=326, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000871', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_height': SlotDefinition(name='host_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The height of subject', alt_descriptions={}, title='host height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=253, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000264', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_last_meal': SlotDefinition(name='host_last_meal', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='content;duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Content of last meal and time since feeding; can include multiple values', alt_descriptions={}, title='host last meal', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='corn feed;P2H', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host last meal'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=327, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000870', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_length': SlotDefinition(name='host_length', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length of subject', alt_descriptions={}, title='host length', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host length'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=254, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000256', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_life_stage': SlotDefinition(name='host_life_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='stage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of life stage of host', alt_descriptions={}, title='host life stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='adult', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host life stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=255, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000251', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_phenotype': SlotDefinition(name='host_phenotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PATO or HP', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Phenotype of human or other host. For phenotypic quality ontology (pato) (v 2018-03-27) terms, please see http://purl.bioontology.org/ontology/pato. For Human Phenotype Ontology (HP) (v 2018-06-13) please see http://purl.bioontology.org/ontology/HP', alt_descriptions={}, title='host phenotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elongated [PATO:0001154]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host phenotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=256, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000874', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_sex': SlotDefinition(name='host_sex', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Gender or physical sex of the host.', alt_descriptions={}, title='host sex', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='non-binary', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host sex'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=328, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000811', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='host_sex_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_shape': SlotDefinition(name='host_shape', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='shape', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Morphological shape of host', alt_descriptions={}, title='host shape', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='round', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host shape'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=329, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000261', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subject_id': SlotDefinition(name='host_subject_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier by which each subject can be referred to, de-identified.', alt_descriptions={}, title='host subject id', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='MPI123', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subject id'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=330, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000861', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subspecf_genlin': SlotDefinition(name='host_subspecf_genlin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about the genetic distinctness of the host organism below the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123.', alt_descriptions={}, title='host subspecific genetic lineage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='serovar:Newport, variety:glabrum, cultivar: Red Delicious', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subspecific genetic lineage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=257, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{rank name}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0001318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_substrate': SlotDefinition(name='host_substrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='substrate name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The growth substrate of the host.', alt_descriptions={}, title='host substrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rock', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host substrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=331, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000252', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_symbiont': SlotDefinition(name='host_symbiont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='species name or common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host.', alt_descriptions={}, title='observed host symbionts', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='flukeworms', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed host symbionts'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=258, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_taxid': SlotDefinition(name='host_taxid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCBI taxon identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='NCBI taxon id of the host, e.g. 9606', alt_descriptions={}, title='host taxid', deprecated=None, todos=[], notes=[], comments=['Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host taxid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=259, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000250', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_tot_mass': SlotDefinition(name='host_tot_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total mass of the host at collection, the unit depends on host', alt_descriptions={}, title='host total mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2500 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host total mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=260, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000263', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_capt_status': SlotDefinition(name='samp_capt_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reason for the sample', alt_descriptions={}, title='sample capture status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='farm sample', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample capture status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=282, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000860', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_capt_status_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_dis_stage': SlotDefinition(name='samp_dis_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of the disease at the time of sample collection, e.g. inoculation, penetration, infection, growth and reproduction, dissemination of pathogen.', alt_descriptions={}, title='sample disease stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='infection', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample disease stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=283, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000249', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_dis_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HostAssociatedInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'JgiMgInterface': ClassDefinition(name='JgiMgInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiMgInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='jgi_mg dh_interface', alt_descriptions={}, title='JGI MG', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['JgiMgInterface_dna_absorb1', 'JgiMgInterface_dna_absorb2', 'JgiMgInterface_dna_concentration', 'JgiMgInterface_dna_cont_type', 'JgiMgInterface_dna_cont_well', 'JgiMgInterface_dna_container_id', 'JgiMgInterface_dna_dnase', 'JgiMgInterface_dna_isolate_meth', 'JgiMgInterface_dna_project_contact', 'JgiMgInterface_dna_samp_id', 'JgiMgInterface_dna_sample_format', 'JgiMgInterface_dna_sample_name', 'JgiMgInterface_dna_seq_project', 'JgiMgInterface_dna_seq_project_name', 'JgiMgInterface_dna_seq_project_pi', 'JgiMgInterface_dna_volume', 'JgiMgInterface_proposal_dna', 'dna_absorb1', 'dna_absorb2', 'dna_concentration', 'dna_cont_type', 'dna_cont_well', 'dna_container_id', 'dna_dnase', 'dna_isolate_meth', 'dna_project_contact', 'dna_samp_id', 'dna_sample_format', 'dna_sample_name', 'dna_seq_project', 'dna_seq_project_name', 'dna_seq_project_pi', 'dna_volume', 'proposal_dna', 'JgiMgInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'dna_absorb1': SlotDefinition(name='dna_absorb1', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/280 measurement of DNA sample purity', alt_descriptions={}, title='DNA absorbance 260/280', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_absorb2': SlotDefinition(name='dna_absorb2', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/230 measurement of DNA sample purity', alt_descriptions={}, title='DNA absorbance 260/230', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_concentration': SlotDefinition(name='dna_concentration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA concentration in ng/ul', deprecated=None, todos=[], notes=[], comments=['Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=2000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Tube or plate (96-well)', alt_descriptions={}, title='DNA container type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plate', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='JgiContTypeEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA plate position', deprecated=None, todos=[], notes=[], comments=[\"Required when 'plate' is selected for container type.\", 'Leave blank if the sample will be shipped in a tube.', 'JGI will not process samples in corner wells, so A1, A12, H1 and H12 will not pass validation.', 'For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8).'], examples=[Example(value='B2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{96 well plate pos}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_container_id': SlotDefinition(name='dna_container_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA container label', deprecated=None, todos=[], notes=[], comments=['Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label.'], examples=[Example(value='Pond_MT_041618', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text < 20 characters}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^.{1,20}$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_dnase': SlotDefinition(name='dna_dnase', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNase treatment DNA', deprecated=None, todos=[], notes=[], comments=['Note DNase treatment is required for all RNA samples.'], examples=[Example(value='no', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='YesNoEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_isolate_meth': SlotDefinition(name='dna_isolate_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Describe the method/protocol/kit used to extract DNA/RNA.', alt_descriptions={}, title='DNA isolation method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='phenol/chloroform extraction', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_project_contact': SlotDefinition(name='dna_project_contact', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project contact', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='John Jones', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_samp_id': SlotDefinition(name='dna_samp_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA sample ID', deprecated=None, todos=[\"Removed identifier = TRUE from dna_samp_ID in JGI_sample_slots, as a class can't have two identifiers. How to force uniqueness? Moot because that column will be prefilled?\"], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='187654', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_sample_format': SlotDefinition(name='dna_sample_format', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Solution in which the DNA sample has been suspended', alt_descriptions={}, title='DNA sample format', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Water', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='dna_sample_format_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_sample_name': SlotDefinition(name='dna_sample_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Give the DNA sample a name that is meaningful to you. Sample names must be unique across all JGI projects and contain a-z, A-Z, 0-9, - and _ only.', alt_descriptions={}, title='DNA sample name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='JGI_pond_041618', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project': SlotDefinition(name='dna_seq_project', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='1191234', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project_name': SlotDefinition(name='dna_seq_project_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project name', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='JGI Pond metagenomics', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project_pi': SlotDefinition(name='dna_seq_project_pi', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project PI', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='Jane Johnson', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_volume': SlotDefinition(name='dna_volume', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA volume in ul', deprecated=None, todos=[], notes=[], comments=['Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only.'], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=25, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'proposal_dna': SlotDefinition(name='proposal_dna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA proposal ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='504000', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:JgiMgInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description=\"DNA samples shipped to JGI for metagenomic analysis in tubes can't have any value for their plate position.\", alt_descriptions={}, title='dna_well_requires_plate', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None), ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description='DNA samples in plates must have a plate position that matches the regex. Note the requirement for an empty string in the tube case. Waiting for value_present validation to be added to runtime', alt_descriptions={}, title='dna_plate_requires_well', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None)], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'JgiMtInterface': ClassDefinition(name='JgiMtInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiMtInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='jgi_mt dh_interface', alt_descriptions={}, title='JGI MT', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['JgiMtInterface_dnase_rna', 'JgiMtInterface_proposal_rna', 'JgiMtInterface_rna_absorb1', 'JgiMtInterface_rna_absorb2', 'JgiMtInterface_rna_concentration', 'JgiMtInterface_rna_cont_type', 'JgiMtInterface_rna_cont_well', 'JgiMtInterface_rna_container_id', 'JgiMtInterface_rna_isolate_meth', 'JgiMtInterface_rna_project_contact', 'JgiMtInterface_rna_samp_id', 'JgiMtInterface_rna_sample_format', 'JgiMtInterface_rna_sample_name', 'JgiMtInterface_rna_seq_project', 'JgiMtInterface_rna_seq_project_name', 'JgiMtInterface_rna_seq_project_pi', 'JgiMtInterface_rna_volume', 'dnase_rna', 'proposal_rna', 'rna_absorb1', 'rna_absorb2', 'rna_concentration', 'rna_cont_type', 'rna_cont_well', 'rna_container_id', 'rna_isolate_meth', 'rna_project_contact', 'rna_samp_id', 'rna_sample_format', 'rna_sample_name', 'rna_seq_project', 'rna_seq_project_name', 'rna_seq_project_pi', 'rna_volume', 'JgiMtInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'dnase_rna': SlotDefinition(name='dnase_rna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNase treated', deprecated=None, todos=[], notes=[], comments=['Note DNase treatment is required for all RNA samples.'], examples=[Example(value='no', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='YesNoEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'proposal_rna': SlotDefinition(name='proposal_rna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA proposal ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='504000', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_absorb1': SlotDefinition(name='rna_absorb1', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/280 measurement of RNA sample purity', alt_descriptions={}, title='RNA absorbance 260/280', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_absorb2': SlotDefinition(name='rna_absorb2', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/230 measurement of RNA sample purity', alt_descriptions={}, title='RNA absorbance 260/230', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_concentration': SlotDefinition(name='rna_concentration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA concentration in ng/ul', deprecated=None, todos=[], notes=[], comments=['Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Tube or plate (96-well)', alt_descriptions={}, title='RNA container type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plate', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='JgiContTypeEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA plate position', deprecated=None, todos=[], notes=[], comments=[\"Required when 'plate' is selected for container type.\", 'Leave blank if the sample will be shipped in a tube.', 'JGI will not process samples in corner wells, so A1, A12, H1 and H12 will not pass validation.', 'For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8).'], examples=[Example(value='B2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{96 well plate pos}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_container_id': SlotDefinition(name='rna_container_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA container label', deprecated=None, todos=[], notes=[], comments=['Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label.'], examples=[Example(value='Pond_MT_041618', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text < 20 characters}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^.{1,20}$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_isolate_meth': SlotDefinition(name='rna_isolate_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Describe the method/protocol/kit used to extract DNA/RNA.', alt_descriptions={}, title='RNA isolation method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='phenol/chloroform extraction', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_project_contact': SlotDefinition(name='rna_project_contact', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project contact', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='John Jones', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_samp_id': SlotDefinition(name='rna_samp_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA sample ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='187654', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_sample_format': SlotDefinition(name='rna_sample_format', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Solution in which the RNA sample has been suspended', alt_descriptions={}, title='RNA sample format', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Water', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='rna_sample_format_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_sample_name': SlotDefinition(name='rna_sample_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Give the RNA sample a name that is meaningful to you. Sample names must be unique across all JGI projects and contain a-z, A-Z, 0-9, - and _ only.', alt_descriptions={}, title='RNA sample name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='JGI_pond_041618', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=2000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project': SlotDefinition(name='rna_seq_project', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='1191234', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project_name': SlotDefinition(name='rna_seq_project_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project name', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='JGI Pond metatranscriptomics', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project_pi': SlotDefinition(name='rna_seq_project_pi', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project PI', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='Jane Johnson', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_volume': SlotDefinition(name='rna_volume', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA volume in ul', deprecated=None, todos=[], notes=[], comments=['Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only.'], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=25, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:JgiMtInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description=\"RNA samples shipped to JGI for metagenomic analysis in tubes can't have any value for their plate position.\", alt_descriptions={}, title='rna_well_requires_plate', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None), ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description='RNA samples in plates must have a plate position that matches the regex. Note the requirement for an empty string in the tube case. Waiting for value_present validation to be added to runtime', alt_descriptions={}, title='rna_plate_requires_well', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None)], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'MiscEnvsInterface': ClassDefinition(name='MiscEnvsInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/MiscEnvsInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='misc_envs dh_interface', alt_descriptions={}, title='Misc Envs', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alt', 'ammonium', 'biomass', 'bromide', 'calcium', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'horizon_meth', 'lat_lon', 'misc_param', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'perturbation', 'ph', 'ph_meth', 'phosphate', 'phosplipid_fatt_acid', 'potassium', 'pressure', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'MiscEnvsInterface_sample_link', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'water_current', 'MiscEnvsInterface_alkalinity', 'MiscEnvsInterface_alt', 'MiscEnvsInterface_ammonium', 'MiscEnvsInterface_biomass', 'MiscEnvsInterface_bromide', 'MiscEnvsInterface_calcium', 'MiscEnvsInterface_chem_administration', 'MiscEnvsInterface_chloride', 'MiscEnvsInterface_chlorophyll', 'MiscEnvsInterface_collection_date', 'MiscEnvsInterface_density', 'MiscEnvsInterface_depth', 'MiscEnvsInterface_diether_lipids', 'MiscEnvsInterface_diss_carb_dioxide', 'MiscEnvsInterface_diss_hydrogen', 'MiscEnvsInterface_diss_inorg_carb', 'MiscEnvsInterface_diss_org_nitro', 'MiscEnvsInterface_diss_oxygen', 'MiscEnvsInterface_ecosystem', 'MiscEnvsInterface_ecosystem_category', 'MiscEnvsInterface_ecosystem_subtype', 'MiscEnvsInterface_ecosystem_type', 'MiscEnvsInterface_elev', 'MiscEnvsInterface_env_broad_scale', 'MiscEnvsInterface_env_local_scale', 'MiscEnvsInterface_env_medium', 'MiscEnvsInterface_env_package', 'MiscEnvsInterface_experimental_factor', 'MiscEnvsInterface_geo_loc_name', 'MiscEnvsInterface_horizon_meth', 'MiscEnvsInterface_lat_lon', 'MiscEnvsInterface_misc_param', 'MiscEnvsInterface_nitrate', 'MiscEnvsInterface_nitrite', 'MiscEnvsInterface_nitro', 'MiscEnvsInterface_org_carb', 'MiscEnvsInterface_org_matter', 'MiscEnvsInterface_org_nitro', 'MiscEnvsInterface_organism_count', 'MiscEnvsInterface_oxy_stat_samp', 'MiscEnvsInterface_perturbation', 'MiscEnvsInterface_ph', 'MiscEnvsInterface_ph_meth', 'MiscEnvsInterface_phosphate', 'MiscEnvsInterface_phosplipid_fatt_acid', 'MiscEnvsInterface_potassium', 'MiscEnvsInterface_pressure', 'MiscEnvsInterface_salinity', 'MiscEnvsInterface_samp_collec_device', 'MiscEnvsInterface_samp_collec_method', 'MiscEnvsInterface_samp_mat_process', 'MiscEnvsInterface_samp_size', 'MiscEnvsInterface_samp_store_dur', 'MiscEnvsInterface_samp_store_loc', 'MiscEnvsInterface_samp_store_temp', 'MiscEnvsInterface_silicate', 'MiscEnvsInterface_size_frac', 'MiscEnvsInterface_sodium', 'MiscEnvsInterface_specific_ecosystem', 'MiscEnvsInterface_sulfate', 'MiscEnvsInterface_sulfide', 'MiscEnvsInterface_temp', 'MiscEnvsInterface_water_current', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_current': SlotDefinition(name='water_current', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per second, knots', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of magnitude and direction of flow within a fluid', alt_descriptions={}, title='water current', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 cubic meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water current'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=236, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000203', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:MiscEnvsInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'PlantAssociatedInterface': ClassDefinition(name='PlantAssociatedInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/PlantAssociatedInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='plant_associated dh_interface', alt_descriptions={}, title='Plant Associated', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['air_temp_regm', 'ances_data', 'antibiotic_regm', 'biol_stat', 'biotic_regm', 'chem_administration', 'chem_mutagen', 'climate_environment', 'collection_date', 'cult_root_med', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'fertilizer_regm', 'fungicide_regm', 'gaseous_environment', 'genetic_mod', 'geo_loc_name', 'gravity', 'growth_facil', 'growth_habit', 'growth_hormone_regm', 'herbicide_regm', 'horizon_meth', 'host_age', 'host_common_name', 'host_dry_mass', 'host_genotype', 'host_height', 'host_length', 'host_life_stage', 'host_phenotype', 'host_subspecf_genlin', 'host_symbiont', 'host_taxid', 'host_tot_mass', 'host_wet_mass', 'humidity_regm', 'lat_lon', 'light_regm', 'mechanical_damage', 'mineral_nutr_regm', 'misc_param', 'non_min_nutr_regm', 'organism_count', 'oxy_stat_samp', 'perturbation', 'pesticide_regm', 'ph_regm', 'plant_growth_med', 'plant_product', 'plant_sex', 'plant_struc', 'radiation_regm', 'rainfall_regm', 'root_cond', 'root_med_carbon', 'root_med_macronutr', 'root_med_micronutr', 'root_med_ph', 'root_med_regl', 'root_med_solid', 'root_med_suppl', 'salinity', 'salt_regm', 'samp_capt_status', 'samp_collec_device', 'samp_collec_method', 'samp_dis_stage', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'PlantAssociatedInterface_sample_link', 'season_environment', 'size_frac', 'specific_ecosystem', 'standing_water_regm', 'temp', 'tiss_cult_growth_med', 'water_temp_regm', 'watering_regm', 'PlantAssociatedInterface_air_temp_regm', 'PlantAssociatedInterface_ances_data', 'PlantAssociatedInterface_antibiotic_regm', 'PlantAssociatedInterface_biol_stat', 'PlantAssociatedInterface_biotic_regm', 'PlantAssociatedInterface_chem_administration', 'PlantAssociatedInterface_chem_mutagen', 'PlantAssociatedInterface_climate_environment', 'PlantAssociatedInterface_collection_date', 'PlantAssociatedInterface_cult_root_med', 'PlantAssociatedInterface_depth', 'PlantAssociatedInterface_ecosystem', 'PlantAssociatedInterface_ecosystem_category', 'PlantAssociatedInterface_ecosystem_subtype', 'PlantAssociatedInterface_ecosystem_type', 'PlantAssociatedInterface_elev', 'PlantAssociatedInterface_env_broad_scale', 'PlantAssociatedInterface_env_local_scale', 'PlantAssociatedInterface_env_medium', 'PlantAssociatedInterface_env_package', 'PlantAssociatedInterface_experimental_factor', 'PlantAssociatedInterface_fertilizer_regm', 'PlantAssociatedInterface_fungicide_regm', 'PlantAssociatedInterface_gaseous_environment', 'PlantAssociatedInterface_genetic_mod', 'PlantAssociatedInterface_geo_loc_name', 'PlantAssociatedInterface_gravity', 'PlantAssociatedInterface_growth_facil', 'PlantAssociatedInterface_growth_habit', 'PlantAssociatedInterface_growth_hormone_regm', 'PlantAssociatedInterface_herbicide_regm', 'PlantAssociatedInterface_horizon_meth', 'PlantAssociatedInterface_host_age', 'PlantAssociatedInterface_host_common_name', 'PlantAssociatedInterface_host_dry_mass', 'PlantAssociatedInterface_host_genotype', 'PlantAssociatedInterface_host_height', 'PlantAssociatedInterface_host_length', 'PlantAssociatedInterface_host_life_stage', 'PlantAssociatedInterface_host_phenotype', 'PlantAssociatedInterface_host_subspecf_genlin', 'PlantAssociatedInterface_host_symbiont', 'PlantAssociatedInterface_host_taxid', 'PlantAssociatedInterface_host_tot_mass', 'PlantAssociatedInterface_host_wet_mass', 'PlantAssociatedInterface_humidity_regm', 'PlantAssociatedInterface_lat_lon', 'PlantAssociatedInterface_light_regm', 'PlantAssociatedInterface_mechanical_damage', 'PlantAssociatedInterface_mineral_nutr_regm', 'PlantAssociatedInterface_misc_param', 'PlantAssociatedInterface_non_min_nutr_regm', 'PlantAssociatedInterface_organism_count', 'PlantAssociatedInterface_oxy_stat_samp', 'PlantAssociatedInterface_perturbation', 'PlantAssociatedInterface_pesticide_regm', 'PlantAssociatedInterface_ph_regm', 'PlantAssociatedInterface_plant_growth_med', 'PlantAssociatedInterface_plant_product', 'PlantAssociatedInterface_plant_sex', 'PlantAssociatedInterface_plant_struc', 'PlantAssociatedInterface_radiation_regm', 'PlantAssociatedInterface_rainfall_regm', 'PlantAssociatedInterface_root_cond', 'PlantAssociatedInterface_root_med_carbon', 'PlantAssociatedInterface_root_med_macronutr', 'PlantAssociatedInterface_root_med_micronutr', 'PlantAssociatedInterface_root_med_ph', 'PlantAssociatedInterface_root_med_regl', 'PlantAssociatedInterface_root_med_solid', 'PlantAssociatedInterface_root_med_suppl', 'PlantAssociatedInterface_salinity', 'PlantAssociatedInterface_salt_regm', 'PlantAssociatedInterface_samp_capt_status', 'PlantAssociatedInterface_samp_collec_device', 'PlantAssociatedInterface_samp_collec_method', 'PlantAssociatedInterface_samp_dis_stage', 'PlantAssociatedInterface_samp_mat_process', 'PlantAssociatedInterface_samp_size', 'PlantAssociatedInterface_samp_store_dur', 'PlantAssociatedInterface_samp_store_loc', 'PlantAssociatedInterface_samp_store_temp', 'PlantAssociatedInterface_season_environment', 'PlantAssociatedInterface_size_frac', 'PlantAssociatedInterface_specific_ecosystem', 'PlantAssociatedInterface_standing_water_regm', 'PlantAssociatedInterface_temp', 'PlantAssociatedInterface_tiss_cult_growth_med', 'PlantAssociatedInterface_water_temp_regm', 'PlantAssociatedInterface_watering_regm', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'air_temp_regm': SlotDefinition(name='air_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='temperature value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying temperatures; should include the temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include different temperature regimens', alt_descriptions={}, title='air temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000551', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ances_data': SlotDefinition(name='ances_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about either pedigree or other ancestral information description (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A x B) x B] x B)', alt_descriptions={}, title='ancestral data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A/3*B', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestral data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=237, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000247', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'antibiotic_regm': SlotDefinition(name='antibiotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='antibiotic name;antibiotic amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving antibiotic administration; should include the name of antibiotic, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple antibiotic regimens', alt_descriptions={}, title='antibiotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['antibiotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=238, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000553', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biol_stat': SlotDefinition(name='biol_stat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The level of genome modification.', alt_descriptions={}, title='biological status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='natural', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biological status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=239, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000858', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biol_stat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_regm': SlotDefinition(name='biotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving use of biotic factors, such as bacteria, viruses or fungi.', alt_descriptions={}, title='biotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sample inoculated with Rhizobium spp. Culture', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001038', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_mutagen': SlotDefinition(name='chem_mutagen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='mutagen name;mutagen amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Treatment involving use of mutagens; should include the name of mutagen, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple mutagen regimens', alt_descriptions={}, title='chemical mutagen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical mutagen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=240, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000555', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'climate_environment': SlotDefinition(name='climate_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Treatment involving an exposure to a particular climate; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple climates', alt_descriptions={}, title='climate environment', deprecated=None, todos=['description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.', 'description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.'], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001040', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cult_root_med': SlotDefinition(name='cult_root_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name, PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name or reference for the hydroponic or in vitro culture rooting medium; can be the name of a commonly used medium or reference to a specific medium, e.g. Murashige and Skoog medium. If the medium has not been formally published, use the rooting medium descriptors.', alt_descriptions={}, title='culture rooting medium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='http://himedialabs.com/TD/PT158.pdf', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['culture rooting medium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=241, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001041', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fertilizer_regm': SlotDefinition(name='fertilizer_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='fertilizer name;fertilizer amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the use of fertilizers; should include the name of fertilizer, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple fertilizer regimens', alt_descriptions={}, title='fertilizer regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fertilizer regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=242, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000556', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fungicide_regm': SlotDefinition(name='fungicide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='fungicide name;fungicide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of fungicides; should include the name of fungicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple fungicide regimens', alt_descriptions={}, title='fungicide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fungicide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=243, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000557', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_environment': SlotDefinition(name='gaseous_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Use of conditions with differing gaseous environments; should include the name of gaseous compound, amount administered, treatment duration, interval and total experimental duration; can include multiple gaseous environment regimens', alt_descriptions={}, title='gaseous environment', deprecated=None, todos=[\"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\", \"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\"], notes=[], comments=[], examples=[Example(value='CO2; 500ppm above ambient; constant', description=None, object=None), Example(value='nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000558', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'genetic_mod': SlotDefinition(name='genetic_mod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection', alt_descriptions={}, title='genetic modification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aox1A transgenic', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['genetic modification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=244, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000859', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gravity': SlotDefinition(name='gravity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gravity factor value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per square second, g', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of gravity factor to study various types of responses in presence, absence or modified levels of gravity; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple treatments', alt_descriptions={}, title='gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=245, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000559', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_facil': SlotDefinition(name='growth_facil', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text or CO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of facility/location where the sample was harvested; controlled vocabulary: growth chamber, open top chamber, glasshouse, experimental garden, field.', alt_descriptions={}, title='growth facility', deprecated=None, todos=[], notes=['Removed from description: Alternatively use Crop Ontology (CO) terms'], comments=[], examples=[Example(value='Growth chamber [CO_715:0000189]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth facility'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001043', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='GrowthFacilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_habit': SlotDefinition(name='growth_habit', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Characteristic shape, appearance or growth form of a plant species', alt_descriptions={}, title='growth habit', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='spreading', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth habit'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=246, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001044', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='growth_habit_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_hormone_regm': SlotDefinition(name='growth_hormone_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='growth hormone name;growth hormone amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of growth hormones; should include the name of growth hormone, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple growth hormone regimens', alt_descriptions={}, title='growth hormone regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth hormone regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=247, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000560', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'herbicide_regm': SlotDefinition(name='herbicide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='herbicide name;herbicide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of herbicides; information about treatment involving use of growth hormones; should include the name of herbicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='herbicide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['herbicide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=248, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000561', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_age': SlotDefinition(name='host_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year, day, hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees', alt_descriptions={}, title='host age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 days', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=249, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000255', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_common_name': SlotDefinition(name='host_common_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Common name of the host.', alt_descriptions={}, title='host common name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='human', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host common name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=250, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000248', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_dry_mass': SlotDefinition(name='host_dry_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of dry mass', alt_descriptions={}, title='host dry mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host dry mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=251, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000257', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_genotype': SlotDefinition(name='host_genotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='genotype', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Observed genotype', alt_descriptions={}, title='host genotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='C57BL/6', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host genotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=252, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000365', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_height': SlotDefinition(name='host_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The height of subject', alt_descriptions={}, title='host height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=253, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000264', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_length': SlotDefinition(name='host_length', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length of subject', alt_descriptions={}, title='host length', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host length'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=254, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000256', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_life_stage': SlotDefinition(name='host_life_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='stage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of life stage of host', alt_descriptions={}, title='host life stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='adult', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host life stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=255, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000251', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_phenotype': SlotDefinition(name='host_phenotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PATO or HP', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Phenotype of human or other host. For phenotypic quality ontology (pato) (v 2018-03-27) terms, please see http://purl.bioontology.org/ontology/pato. For Human Phenotype Ontology (HP) (v 2018-06-13) please see http://purl.bioontology.org/ontology/HP', alt_descriptions={}, title='host phenotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elongated [PATO:0001154]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host phenotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=256, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000874', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subspecf_genlin': SlotDefinition(name='host_subspecf_genlin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about the genetic distinctness of the host organism below the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123.', alt_descriptions={}, title='host subspecific genetic lineage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='serovar:Newport, variety:glabrum, cultivar: Red Delicious', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subspecific genetic lineage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=257, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{rank name}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0001318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_symbiont': SlotDefinition(name='host_symbiont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='species name or common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host.', alt_descriptions={}, title='observed host symbionts', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='flukeworms', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed host symbionts'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=258, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_taxid': SlotDefinition(name='host_taxid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCBI taxon identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='NCBI taxon id of the host, e.g. 9606', alt_descriptions={}, title='host taxid', deprecated=None, todos=[], notes=[], comments=['Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host taxid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=259, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000250', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_tot_mass': SlotDefinition(name='host_tot_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total mass of the host at collection, the unit depends on host', alt_descriptions={}, title='host total mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2500 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host total mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=260, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000263', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_wet_mass': SlotDefinition(name='host_wet_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of wet mass', alt_descriptions={}, title='host wet mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1500 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host wet mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=261, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000567', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity_regm': SlotDefinition(name='humidity_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='humidity value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying degree of humidity; information about treatment involving use of growth hormones; should include amount of humidity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='humidity regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000568', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_regm': SlotDefinition(name='light_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='exposure type;light intensity;light quality', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux; micrometer, nanometer, angstrom', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving exposure to light, including both light intensity and quality.', alt_descriptions={}, title='light regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='incandescant light;10 lux;450 nanometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000569', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mechanical_damage': SlotDefinition(name='mechanical_damage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='damage type;body site', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about any mechanical damage exerted on the plant; can include multiple damages and sites', alt_descriptions={}, title='mechanical damage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='pruning;bark', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mechanical damage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=262, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text}', singular_name=None, domain=None, slot_uri='MIXS:0001052', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mineral_nutr_regm': SlotDefinition(name='mineral_nutr_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='mineral nutrient name;mineral nutrient amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the use of mineral supplements; should include the name of mineral nutrient, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple mineral nutrient regimens', alt_descriptions={}, title='mineral nutrient regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mineral nutrient regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=263, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000570', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_min_nutr_regm': SlotDefinition(name='non_min_nutr_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='non-mineral nutrient name;non-mineral nutrient amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the exposure of plant to non-mineral nutrient such as oxygen, hydrogen or carbon; should include the name of non-mineral nutrient, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple non-mineral nutrient regimens', alt_descriptions={}, title='non-mineral nutrient regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='carbon dioxide;10 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-mineral nutrient regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=264, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000571', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pesticide_regm': SlotDefinition(name='pesticide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pesticide name;pesticide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of insecticides; should include the name of pesticide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple pesticide regimens', alt_descriptions={}, title='pesticide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pesticide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=265, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000573', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_regm': SlotDefinition(name='ph_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving exposure of plants to varying levels of ph of the growth media, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimen', alt_descriptions={}, title='pH regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=266, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001056', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_growth_med': SlotDefinition(name='plant_growth_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='EO or enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specification of the media for growing the plants or tissue cultured samples, e.g. soil, aeroponic, hydroponic, in vitro solid culture medium, in vitro liquid culture medium. Recommended value is a specific value from EO:plant growth medium (follow this link for terms http://purl.obolibrary.org/obo/EO_0007147) or other controlled vocabulary', alt_descriptions={}, title='plant growth medium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='hydroponic plant culture media [EO:0007067]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant growth medium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=267, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001057', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_product': SlotDefinition(name='plant_product', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='product name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Substance produced by the plant, where the sample was obtained from', alt_descriptions={}, title='plant product', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='xylem sap [PO:0025539]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant product'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=268, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001058', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_sex': SlotDefinition(name='plant_sex', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sex of the reproductive parts on the whole plant, e.g. pistillate, staminate, monoecieous, hermaphrodite.', alt_descriptions={}, title='plant sex', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Hermaphroditic', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant sex'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=269, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001059', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='plant_sex_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_struc': SlotDefinition(name='plant_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of plant structure the sample was obtained from; for Plant Ontology (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO, e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex of it can be recorded here.', alt_descriptions={}, title='plant structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='epidermis [PO:0005679]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=270, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001060', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'radiation_regm': SlotDefinition(name='radiation_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='radiation type name;radiation amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='rad, gray', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving exposure of plant or a plant part to a particular radiation regimen; should include the radiation type, amount or intensity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple radiation regimens', alt_descriptions={}, title='radiation regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['radiation regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=271, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000575', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rainfall_regm': SlotDefinition(name='rainfall_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to a given amount of rainfall, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='rainfall regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rainfall regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=272, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000576', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_cond': SlotDefinition(name='root_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Relevant rooting conditions such as field plot size, sowing density, container dimensions, number of plants per container.', alt_descriptions={}, title='rooting conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='http://himedialabs.com/TD/PT158.pdf', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=273, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001061', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_carbon': SlotDefinition(name='root_med_carbon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='carbon source name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Source of organic carbon in the culture rooting medium; e.g. sucrose.', alt_descriptions={}, title='rooting medium carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sucrose', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=274, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000577', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_macronutr': SlotDefinition(name='root_med_macronutr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='macronutrient name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of the culture rooting medium macronutrients (N,P, K, Ca, Mg, S); e.g. KH2PO4 (170¬†mg/L).', alt_descriptions={}, title='rooting medium macronutrients', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='KH2PO4;170¬†milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium macronutrients'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=275, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000578', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_micronutr': SlotDefinition(name='root_med_micronutr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='micronutrient name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of the culture rooting medium micronutrients (Fe, Mn, Zn, B, Cu, Mo); e.g. H3BO3 (6.2¬†mg/L).', alt_descriptions={}, title='rooting medium micronutrients', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='H3BO3;6.2¬†milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium micronutrients'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=276, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000579', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_ph': SlotDefinition(name='root_med_ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the culture rooting medium; e.g. 5.5.', alt_descriptions={}, title='rooting medium pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=277, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001062', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_regl': SlotDefinition(name='root_med_regl', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='regulator name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Growth regulators in the culture rooting medium such as cytokinins, auxins, gybberellins, abscisic acid; e.g. 0.5¬†mg/L NAA.', alt_descriptions={}, title='rooting medium regulators', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='abscisic acid;0.75 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium regulators'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=278, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000581', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_solid': SlotDefinition(name='root_med_solid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specification of the solidifying agent in the culture rooting medium; e.g. agar.', alt_descriptions={}, title='rooting medium solidifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium solidifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=279, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001063', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_suppl': SlotDefinition(name='root_med_suppl', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='supplement name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Organic supplements of the culture rooting medium, such as vitamins, amino acids, organic acids, antibiotics activated charcoal; e.g. nicotinic acid (0.5¬†mg/L).', alt_descriptions={}, title='rooting medium organic supplements', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nicotinic acid;0.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium organic supplements'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=280, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000580', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salt_regm': SlotDefinition(name='salt_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='salt name;salt amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of salts as supplement to liquid and soil growth media; should include the name of salt, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple salt regimens', alt_descriptions={}, title='salt regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salt regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=281, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000582', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_capt_status': SlotDefinition(name='samp_capt_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reason for the sample', alt_descriptions={}, title='sample capture status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='farm sample', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample capture status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=282, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000860', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_capt_status_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_dis_stage': SlotDefinition(name='samp_dis_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of the disease at the time of sample collection, e.g. inoculation, penetration, infection, growth and reproduction, dissemination of pathogen.', alt_descriptions={}, title='sample disease stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='infection', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample disease stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=283, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000249', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_dis_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_environment': SlotDefinition(name='season_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='seasonal environment name;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Treatment involving an exposure to a particular season (e.g. Winter, summer, rabi, rainy etc.), treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment', alt_descriptions={}, title='seasonal environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['seasonal environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=284, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001068', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'standing_water_regm': SlotDefinition(name='standing_water_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='standing water type;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description=\"Treatment involving an exposure to standing water during a plant's life span, types can be flood water or standing water, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens\", alt_descriptions={}, title='standing water regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['standing water regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=286, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001069', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tiss_cult_growth_med': SlotDefinition(name='tiss_cult_growth_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of plant tissue culture growth media used', alt_descriptions={}, title='tissue culture growth media', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://link.springer.com/content/pdf/10.1007/BF02796489.pdf', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tissue culture growth media'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=287, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001070', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_temp_regm': SlotDefinition(name='water_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to water with varying degree of temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='water temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=288, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000590', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'watering_regm': SlotDefinition(name='watering_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Information about treatment involving an exposure to watering frequencies, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='watering regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None), Example(value='75% water holding capacity; constant', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000591', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:PlantAssociatedInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SedimentInterface': ClassDefinition(name='SedimentInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SedimentInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='sediment dh_interface', alt_descriptions={}, title='Sediment', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkyl_diethers', 'aminopept_act', 'ammonium', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'magnesium', 'mean_frict_vel', 'mean_peak_frict_vel', 'methane', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'particle_class', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'porosity', 'potassium', 'pressure', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'SedimentInterface_sample_link', 'sediment_type', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'tidal_stage', 'tot_carb', 'tot_depth_water_col', 'tot_nitro_content', 'tot_org_carb', 'turbidity', 'water_content', 'SedimentInterface_alkalinity', 'SedimentInterface_alkyl_diethers', 'SedimentInterface_aminopept_act', 'SedimentInterface_ammonium', 'SedimentInterface_bacteria_carb_prod', 'SedimentInterface_biomass', 'SedimentInterface_bishomohopanol', 'SedimentInterface_bromide', 'SedimentInterface_calcium', 'SedimentInterface_carb_nitro_ratio', 'SedimentInterface_chem_administration', 'SedimentInterface_chloride', 'SedimentInterface_chlorophyll', 'SedimentInterface_collection_date', 'SedimentInterface_density', 'SedimentInterface_depth', 'SedimentInterface_diether_lipids', 'SedimentInterface_diss_carb_dioxide', 'SedimentInterface_diss_hydrogen', 'SedimentInterface_diss_inorg_carb', 'SedimentInterface_diss_org_carb', 'SedimentInterface_diss_org_nitro', 'SedimentInterface_diss_oxygen', 'SedimentInterface_ecosystem', 'SedimentInterface_ecosystem_category', 'SedimentInterface_ecosystem_subtype', 'SedimentInterface_ecosystem_type', 'SedimentInterface_elev', 'SedimentInterface_env_broad_scale', 'SedimentInterface_env_local_scale', 'SedimentInterface_env_medium', 'SedimentInterface_env_package', 'SedimentInterface_experimental_factor', 'SedimentInterface_geo_loc_name', 'SedimentInterface_glucosidase_act', 'SedimentInterface_horizon_meth', 'SedimentInterface_lat_lon', 'SedimentInterface_magnesium', 'SedimentInterface_mean_frict_vel', 'SedimentInterface_mean_peak_frict_vel', 'SedimentInterface_methane', 'SedimentInterface_misc_param', 'SedimentInterface_n_alkanes', 'SedimentInterface_nitrate', 'SedimentInterface_nitrite', 'SedimentInterface_nitro', 'SedimentInterface_org_carb', 'SedimentInterface_org_matter', 'SedimentInterface_org_nitro', 'SedimentInterface_organism_count', 'SedimentInterface_oxy_stat_samp', 'SedimentInterface_part_org_carb', 'SedimentInterface_particle_class', 'SedimentInterface_perturbation', 'SedimentInterface_petroleum_hydrocarb', 'SedimentInterface_ph', 'SedimentInterface_ph_meth', 'SedimentInterface_phaeopigments', 'SedimentInterface_phosphate', 'SedimentInterface_phosplipid_fatt_acid', 'SedimentInterface_porosity', 'SedimentInterface_potassium', 'SedimentInterface_pressure', 'SedimentInterface_redox_potential', 'SedimentInterface_salinity', 'SedimentInterface_samp_collec_device', 'SedimentInterface_samp_collec_method', 'SedimentInterface_samp_mat_process', 'SedimentInterface_samp_size', 'SedimentInterface_samp_store_dur', 'SedimentInterface_samp_store_loc', 'SedimentInterface_samp_store_temp', 'SedimentInterface_sediment_type', 'SedimentInterface_silicate', 'SedimentInterface_size_frac', 'SedimentInterface_sodium', 'SedimentInterface_specific_ecosystem', 'SedimentInterface_sulfate', 'SedimentInterface_sulfide', 'SedimentInterface_temp', 'SedimentInterface_tidal_stage', 'SedimentInterface_tot_carb', 'SedimentInterface_tot_depth_water_col', 'SedimentInterface_tot_nitro_content', 'SedimentInterface_tot_org_carb', 'SedimentInterface_turbidity', 'SedimentInterface_water_content', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'particle_class': SlotDefinition(name='particle_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Particles are classified, based on their size, into six general categories:clay, silt, sand, gravel, cobbles, and boulders; should include amount of particle preceded by the name of the particle type; can include multiple values', alt_descriptions={}, title='particle classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particle classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=32, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000206', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'porosity': SlotDefinition(name='porosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Porosity of deposited sediment is volume of voids divided by the total volume of sample', alt_descriptions={}, title='porosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['porosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000211', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sediment_type': SlotDefinition(name='sediment_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about the sediment type based on major constituents', alt_descriptions={}, title='sediment type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biogenous', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sediment type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=42, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001078', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sediment_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tidal_stage': SlotDefinition(name='tidal_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of tide', alt_descriptions={}, title='tidal stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='high tide', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tidal stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000750', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tidal_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_depth_water_col': SlotDefinition(name='tot_depth_water_col', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of total depth of water column', alt_descriptions={}, title='total depth of water column', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total depth of water column'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000634', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SedimentInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SoilInterface': ClassDefinition(name='SoilInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='soil dh_interface', alt_descriptions={}, title='Soil', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin', 'SoilMixsInspiredMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['agrochem_addition', 'air_temp_regm', 'al_sat', 'al_sat_meth', 'ammonium_nitrogen', 'annual_precpt', 'annual_temp', 'biotic_regm', 'biotic_relationship', 'carb_nitro_ratio', 'chem_administration', 'climate_environment', 'collection_date', 'SoilInterface_collection_date_inc', 'SoilInterface_collection_time', 'SoilInterface_collection_time_inc', 'crop_rotation', 'cur_land_use', 'cur_vegetation', 'cur_vegetation_meth', 'depth', 'drainage_class', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'SoilInterface_experimental_factor_other', 'extreme_event', 'fao_class', 'SoilInterface_filter_method', 'fire', 'flooding', 'gaseous_environment', 'geo_loc_name', 'growth_facil', 'heavy_metals', 'heavy_metals_meth', 'horizon_meth', 'humidity_regm', 'SoilInterface_isotope_exposure', 'lat_lon', 'lbc_thirty', 'lbceq', 'light_regm', 'link_class_info', 'link_climate_info', 'local_class', 'local_class_meth', 'manganese', 'SoilInterface_micro_biomass_c_meth', 'micro_biomass_c_meth', 'micro_biomass_meth', 'SoilInterface_micro_biomass_n_meth', 'micro_biomass_n_meth', 'microbial_biomass', 'SoilInterface_microbial_biomass_c', 'microbial_biomass_c', 'SoilInterface_microbial_biomass_n', 'microbial_biomass_n', 'misc_param', 'nitrate_nitrogen', 'nitrite_nitrogen', 'SoilInterface_non_microb_biomass', 'SoilInterface_non_microb_biomass_method', 'org_matter', 'org_nitro', 'SoilInterface_org_nitro_method', 'SoilInterface_other_treatment', 'oxy_stat_samp', 'ph', 'ph_meth', 'phosphate', 'prev_land_use_meth', 'previous_land_use', 'profile_position', 'salinity', 'salinity_meth', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_temp', 'SoilInterface_sample_link', 'season_precpt', 'season_temp', 'sieving', 'size_frac_low', 'size_frac_up', 'slope_aspect', 'slope_gradient', 'soil_horizon', 'soil_text_measure', 'soil_texture_meth', 'soil_type', 'soil_type_meth', 'specific_ecosystem', 'SoilInterface_start_date_inc', 'SoilInterface_start_time_inc', 'store_cond', 'temp', 'tillage', 'tot_carb', 'tot_nitro_cont_meth', 'tot_nitro_content', 'tot_org_c_meth', 'tot_org_carb', 'tot_phosp', 'water_cont_soil_meth', 'water_content', 'watering_regm', 'zinc', 'SoilInterface_agrochem_addition', 'SoilInterface_air_temp_regm', 'SoilInterface_al_sat', 'SoilInterface_al_sat_meth', 'SoilInterface_ammonium_nitrogen', 'SoilInterface_annual_precpt', 'SoilInterface_annual_temp', 'SoilInterface_biotic_regm', 'SoilInterface_biotic_relationship', 'SoilInterface_carb_nitro_ratio', 'SoilInterface_chem_administration', 'SoilInterface_climate_environment', 'SoilInterface_collection_date', 'SoilInterface_crop_rotation', 'SoilInterface_cur_land_use', 'SoilInterface_cur_vegetation', 'SoilInterface_cur_vegetation_meth', 'SoilInterface_depth', 'SoilInterface_drainage_class', 'SoilInterface_ecosystem', 'SoilInterface_ecosystem_category', 'SoilInterface_ecosystem_subtype', 'SoilInterface_ecosystem_type', 'SoilInterface_elev', 'SoilInterface_env_broad_scale', 'SoilInterface_env_local_scale', 'SoilInterface_env_medium', 'SoilInterface_env_package', 'SoilInterface_experimental_factor', 'SoilInterface_extreme_event', 'SoilInterface_fao_class', 'SoilInterface_fire', 'SoilInterface_flooding', 'SoilInterface_gaseous_environment', 'SoilInterface_geo_loc_name', 'SoilInterface_growth_facil', 'SoilInterface_heavy_metals', 'SoilInterface_heavy_metals_meth', 'SoilInterface_horizon_meth', 'SoilInterface_humidity_regm', 'SoilInterface_lat_lon', 'SoilInterface_lbc_thirty', 'SoilInterface_lbceq', 'SoilInterface_light_regm', 'SoilInterface_link_class_info', 'SoilInterface_link_climate_info', 'SoilInterface_local_class', 'SoilInterface_local_class_meth', 'SoilInterface_manganese', 'SoilInterface_micro_biomass_meth', 'SoilInterface_microbial_biomass', 'SoilInterface_misc_param', 'SoilInterface_nitrate_nitrogen', 'SoilInterface_nitrite_nitrogen', 'SoilInterface_org_matter', 'SoilInterface_org_nitro', 'SoilInterface_oxy_stat_samp', 'SoilInterface_ph', 'SoilInterface_ph_meth', 'SoilInterface_phosphate', 'SoilInterface_prev_land_use_meth', 'SoilInterface_previous_land_use', 'SoilInterface_profile_position', 'SoilInterface_salinity', 'SoilInterface_salinity_meth', 'SoilInterface_samp_collec_device', 'SoilInterface_samp_collec_method', 'SoilInterface_samp_mat_process', 'SoilInterface_samp_size', 'SoilInterface_samp_store_temp', 'SoilInterface_season_precpt', 'SoilInterface_season_temp', 'SoilInterface_sieving', 'SoilInterface_size_frac_low', 'SoilInterface_size_frac_up', 'SoilInterface_slope_aspect', 'SoilInterface_slope_gradient', 'SoilInterface_soil_horizon', 'SoilInterface_soil_text_measure', 'SoilInterface_soil_texture_meth', 'SoilInterface_soil_type', 'SoilInterface_soil_type_meth', 'SoilInterface_specific_ecosystem', 'SoilInterface_store_cond', 'SoilInterface_temp', 'SoilInterface_tillage', 'SoilInterface_tot_carb', 'SoilInterface_tot_nitro_cont_meth', 'SoilInterface_tot_nitro_content', 'SoilInterface_tot_org_c_meth', 'SoilInterface_tot_org_carb', 'SoilInterface_tot_phosp', 'SoilInterface_water_cont_soil_meth', 'SoilInterface_water_content', 'SoilInterface_watering_regm', 'SoilInterface_zinc', 'SoilInterface_organism_count', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'agrochem_addition': SlotDefinition(name='agrochem_addition', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='agrochemical name;agrochemical amount;timestamp', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Addition of fertilizers, pesticides, etc. - amount and time of applications', alt_descriptions={}, title='history/agrochemical additions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='roundup;5 milligram per liter;2018-06-21', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/agrochemical additions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000639', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.*', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'air_temp_regm': SlotDefinition(name='air_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='temperature value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying temperatures; should include the temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include different temperature regimens', alt_descriptions={}, title='air temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000551', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'al_sat': SlotDefinition(name='al_sat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The relative abundance of aluminum in the sample', alt_descriptions={}, title='aluminum saturation/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\"], notes=[], comments=['Aluminum saturation is the percentage of the CEC occupies by aluminum. Like all cations, aluminum held by the cation exchange complex is in equilibrium with aluminum in the soil solution.'], examples=[Example(value='0.27', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000607', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'al_sat_meth': SlotDefinition(name='al_sat_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining Aluminum saturation', alt_descriptions={}, title='aluminum saturation method/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts?\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts?\"], notes=[], comments=['Required when aluminum saturation is provided.'], examples=[Example(value='https://doi.org/10.1371/journal.pone.0176357', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000324', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium_nitrogen': SlotDefinition(name='ammonium_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium nitrogen in the sample', alt_descriptions={}, title='ammonium nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.3 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium_nitrogen', 'NH4-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1005, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'annual_precpt': SlotDefinition(name='annual_precpt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The average of all annual precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.', alt_descriptions={}, title='mean annual precipitation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC, added example. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC, added example. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=[], examples=[Example(value='8.94 inch', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000644', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'annual_temp': SlotDefinition(name='annual_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Mean annual temperature', alt_descriptions={}, title='mean annual temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean annual temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000642', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_regm': SlotDefinition(name='biotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving use of biotic factors, such as bacteria, viruses or fungi.', alt_descriptions={}, title='biotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sample inoculated with Rhizobium spp. Culture', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001038', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_relationship': SlotDefinition(name='biotic_relationship', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={})}, description='Description of relationship(s) between the subject organism and other organism(s) it is associated with. E.g., parasite on species X; mutualist with species Y. The target organism is the subject of the relationship, and the other organism(s) is the object', alt_descriptions={}, title='observed biotic relationship', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='free living', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed biotic relationship'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000028', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biotic_relationship_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'climate_environment': SlotDefinition(name='climate_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Treatment involving an exposure to a particular climate; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple climates', alt_descriptions={}, title='climate environment', deprecated=None, todos=['description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.', 'description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.'], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001040', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date_inc': SlotDefinition(name='collection_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time': SlotDefinition(name='collection_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The time of sampling, either as an instance (single point) or interval.', alt_descriptions={}, title='collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time_inc': SlotDefinition(name='collection_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'crop_rotation': SlotDefinition(name='crop_rotation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='crop rotation status;schedule', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Whether or not crop is rotated, and if yes, rotation schedule', alt_descriptions={}, title='history/crop rotation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='yes;R2/2017-01-01/2018-12-31/P6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/crop rotation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{boolean};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_land_use': SlotDefinition(name='cur_land_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Present state of sample site', alt_descriptions={}, title='current land use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='conifers', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['current land use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001080', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='cur_land_use_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_vegetation': SlotDefinition(name='cur_vegetation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Vegetation classification from one or more standard classification systems, or agricultural crop', alt_descriptions={}, title='current vegetation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Recommend changing this from text value to some king of ontology?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Recommend changing this from text value to some kind of ontology?'], notes=[], comments=['Values provided here can be specific species of vegetation or vegetation regions', 'See for vegetation regions- https://education.nationalgeographic.org/resource/vegetation-region'], examples=[Example(value='deciduous forest', description=None, object=None), Example(value='forest', description=None, object=None), Example(value='Bauhinia variegata', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000312', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_vegetation_meth': SlotDefinition(name='cur_vegetation_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in vegetation classification', alt_descriptions={}, title='current vegetation method', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I'm not sure this is a DOI, PMID, or URI. Should pool the community and find out how they accomplish this if provided.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I'm not sure this is a DOI, PMID, or URI. Should pool the community and find out how they accomplish this if provided.\"], notes=[], comments=['Required when current vegetation is provided.'], examples=[Example(value='https://doi.org/10.1111/j.1654-109X.2011.01154.x', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000314', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'drainage_class': SlotDefinition(name='drainage_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Drainage classification from a standard system such as the USDA system', alt_descriptions={}, title='drainage classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='well', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['drainage classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001085', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='drainage_class_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemCategoryEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemSubtypeEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemTypeEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvBroadScaleSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvLocalScaleSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvMediumSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor_other': SlotDefinition(name='experimental_factor_other', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Other details about your sample that you feel can't be accurately represented in the available columns.\", alt_descriptions={}, title='experimental factor- other', deprecated=None, todos=[], notes=[], comments=['This slot accepts open-ended text about your sample.', 'We recommend using key:value pairs.', 'Provided pairs will be considered for inclusion as future slots/terms in this data collection template.'], examples=[Example(value='experimental treatment: value', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:experimental_factor|additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extreme_event': SlotDefinition(name='extreme_event', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date, string', extensions={}, annotations={})}, description='Unusual physical events that may have affected microbial populations', alt_descriptions={}, title='history/extreme events', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=[], examples=[Example(value='1980-05-18, volcanic eruption', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000320', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fao_class': SlotDefinition(name='fao_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Soil classification from the FAO World Reference Database for Soil Resources. The list can be found at http://www.fao.org/nr/land/sols/soil/wrb-soil-maps/reference-groups', alt_descriptions={}, title='soil_taxonomic/FAO classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Luvisols', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/FAO classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001083', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='fao_class_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_method': SlotDefinition(name='filter_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of filter used or how the sample was filtered', alt_descriptions={}, title='filter method', deprecated=None, todos=[], notes=[], comments=['describe the filter or provide a catalog number and manufacturer'], examples=[Example(value='C18', description=None, object=None), Example(value='Basix PES, 13-100-106 FisherSci', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:filter_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fire': SlotDefinition(name='fire', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date string', extensions={}, annotations={})}, description='Historical and/or physical evidence of fire', alt_descriptions={}, title='history/fire', deprecated=None, todos=['is \"to\" acceptable? Is there a better way to request that be written?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'is \"to\" acceptable? Is there a better way to request that be written?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Provide the date the fire occurred. If extended burning occurred provide the date range.'], examples=[Example(value='1871-10-10', description=None, object=None), Example(value='1871-10-01 to 1871-10-31', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001086', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?(\\\\s+to\\\\s+[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'flooding': SlotDefinition(name='flooding', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date string', extensions={}, annotations={})}, description='Historical and/or physical evidence of flooding', alt_descriptions={}, title='history/flooding', deprecated=None, todos=['is \"to\" acceptable? Is there a better way to request that be written?', 'What about if the \"day\" isn\\'t known? Is this ok?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'is \"to\" acceptable? Is there a better way to request that be written?', 'What about if the \"day\" isn\\'t known? Is this ok?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Provide the date the flood occurred. If extended flooding occurred provide the date range.'], examples=[Example(value='1927-04-15', description=None, object=None), Example(value='1927-04 to 1927-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000319', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_environment': SlotDefinition(name='gaseous_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Use of conditions with differing gaseous environments; should include the name of gaseous compound, amount administered, treatment duration, interval and total experimental duration; can include multiple gaseous environment regimens', alt_descriptions={}, title='gaseous environment', deprecated=None, todos=[\"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\", \"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\"], notes=[], comments=[], examples=[Example(value='CO2; 500ppm above ambient; constant', description=None, object=None), Example(value='nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000558', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_facil': SlotDefinition(name='growth_facil', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text or CO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of facility/location where the sample was harvested; controlled vocabulary: growth chamber, open top chamber, glasshouse, experimental garden, field.', alt_descriptions={}, title='growth facility', deprecated=None, todos=[], notes=['Removed from description: Alternatively use Crop Ontology (CO) terms'], comments=[], examples=[Example(value='Growth chamber [CO_715:0000189]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth facility'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001043', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='GrowthFacilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heavy_metals': SlotDefinition(name='heavy_metals', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Heavy metals present in the sample and their concentrations.', alt_descriptions={}, title='heavy metals/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\"], notes=[\"Changed to multi-valued. In MIxS, you add another column to denote multiple heavy metals. We don't have that ability in the submission portal.\", \"Changed to multi-valued. In MIxS, you add another column to denote multiple heavy metals. We don't have that ability in the submission portal.\"], comments=['For multiple heavy metals and concentrations, separate by ;'], examples=[Example(value='mercury 0.09 micrograms per gram', description=None, object=None), Example(value='mercury 0.09 ug/g; chromium 0.03 ug/g', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000652', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heavy_metals_meth': SlotDefinition(name='heavy_metals_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining heavy metals', alt_descriptions={}, title='heavy metals method/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Required when heavy metals are provided', 'If different methods are used for multiple metals, indicate the metal and method. Separate metals by ;'], examples=[Example(value='https://doi.org/10.3390/ijms9040434', description=None, object=None), Example(value='mercury https://doi.org/10.1007/BF01056090; chromium https://doi.org/10.1007/s00216-006-0322-8', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000343', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='soil horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity_regm': SlotDefinition(name='humidity_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='humidity value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying degree of humidity; information about treatment involving use of growth hormones; should include amount of humidity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='humidity regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000568', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'isotope_exposure': SlotDefinition(name='isotope_exposure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='List isotope exposure or addition applied to your sample.', alt_descriptions={}, title='isotope exposure/addition', deprecated=None, todos=['Can we make the H218O correctly super and subscripted?'], notes=[], comments=['This is required when your experimental design includes the use of isotopically labeled compounds'], examples=[Example(value='13C glucose', description=None, object=None), Example(value='H218O', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:chem_administration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}; {timestamp}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]; ([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lbc_thirty': SlotDefinition(name='lbc_thirty', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ppm CaCO3/pH', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='lime buffer capacity, determined after 30 minute incubation', alt_descriptions={}, title='lime buffer capacity (at 30 minutes)', deprecated=None, todos=[], notes=[], comments=['This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit'], examples=[Example(value='543 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0', 'https://secure.caes.uga.edu/extension/publications/files/pdf/C%20874_5.PDF'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lbc_thirty', 'lbc30', 'lime buffer capacity (at 30 minutes)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1001, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lbceq': SlotDefinition(name='lbceq', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ppm CaCO3/pH', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='lime buffer capacity, determined at equilibrium after 5 day incubation', alt_descriptions={}, title='lime buffer capacity (after 5 day incubation)', deprecated=None, todos=[], notes=[], comments=['This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit'], examples=[Example(value='1575 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lbceq', 'lime buffer capacity (at 5-day equilibrium)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1002, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_regm': SlotDefinition(name='light_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='exposure type;light intensity;light quality', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux; micrometer, nanometer, angstrom', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving exposure to light, including both light intensity and quality.', alt_descriptions={}, title='light regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='incandescant light;10 lux;450 nanometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000569', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'link_class_info': SlotDefinition(name='link_class_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Link to digitized soil maps or other soil classification information', alt_descriptions={}, title='link to classification information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['link to classification information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000329', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'link_climate_info': SlotDefinition(name='link_climate_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Link to climate resource', alt_descriptions={}, title='link to climate information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['link to climate information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000328', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_class': SlotDefinition(name='local_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='local classification name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Soil classification based on local soil classification system', alt_descriptions={}, title='soil_taxonomic/local classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/local classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000330', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_class_meth': SlotDefinition(name='local_class_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the local soil classification', alt_descriptions={}, title='soil_taxonomic/local classification method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/local classification method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000331', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'manganese': SlotDefinition(name='manganese', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg (ppm)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of manganese in the sample', alt_descriptions={}, title='manganese', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='24.7 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['manganese'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1003, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_c_meth': SlotDefinition(name='micro_biomass_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass carbon', alt_descriptions={}, title='microbial biomass carbon method', deprecated=None, todos=['How should we separate values? | or ;? lets be consistent'], notes=[], comments=['required if \"microbial_biomass_c\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_meth': SlotDefinition(name='micro_biomass_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining microbial biomass', alt_descriptions={}, title='microbial biomass method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['microbial biomass method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000339', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_n_meth': SlotDefinition(name='micro_biomass_n_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass nitrogen', alt_descriptions={}, title='microbial biomass nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"microbial_biomass_n\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass': SlotDefinition(name='microbial_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram per kilogram soil', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer. If you keep this, you would need to have correction factors used for conversion to the final units', alt_descriptions={}, title='microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['microbial biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=42, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000650', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_c': SlotDefinition(name='microbial_biomass_c', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass carbon', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug C/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_n': SlotDefinition(name='microbial_biomass_n', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass nitrogen', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug N/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate_nitrogen': SlotDefinition(name='nitrate_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate nitrogen in the sample', alt_descriptions={}, title='nitrate_nitrogen', deprecated=None, todos=[], notes=[], comments=['often below some specified limit of detection'], examples=[Example(value='0.29 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate_nitrogen', 'NO3-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1006, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite_nitrogen': SlotDefinition(name='nitrite_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite nitrogen in the sample', alt_descriptions={}, title='nitrite_nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.2 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite_nitrogen', 'NO2-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1007, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass': SlotDefinition(name='non_microb_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Amount of biomass; should include the name for the part of biomass measured, e.g.insect, plant, total. Can include multiple measurements separated by ;', alt_descriptions={}, title='non-microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='insect 0.23 ug; plant 1g', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:biomass|microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass_method': SlotDefinition(name='non_microb_biomass_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining biomass', alt_descriptions={}, title='non-microbial biomass method', deprecated=None, todos=[], notes=[], comments=['required if \"non-microbial biomass\" is provided'], examples=[Example(value='https://doi.org/10.1038/s41467-021-26181-3', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro_method': SlotDefinition(name='org_nitro_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Method used for obtaining organic nitrogen', alt_descriptions={}, title='organic nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"org_nitro\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(85)90144-0', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:org_nitro|tot_nitro_cont_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'other_treatment': SlotDefinition(name='other_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Other treatments applied to your samples that are not applicable to the provided fields', alt_descriptions={}, title='other treatments', deprecated=None, todos=[], notes=[], comments=['This is an open text field to provide any treatments that cannot be captured in the provided slots.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prev_land_use_meth': SlotDefinition(name='prev_land_use_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining previous land use and dates', alt_descriptions={}, title='history/previous land use method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/previous land use method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000316', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'previous_land_use': SlotDefinition(name='previous_land_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='land use name;date', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Previous land use and dates', alt_descriptions={}, title='history/previous land use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/previous land use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000315', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'profile_position': SlotDefinition(name='profile_position', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Cross-sectional position in the hillslope where sample was collected.sample area position in relation to surrounding areas', alt_descriptions={}, title='profile position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='summit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['profile position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001084', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='profile_position_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity_meth': SlotDefinition(name='salinity_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining salinity', alt_descriptions={}, title='salinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.1007/978-1-61779-986-0_28', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=55, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000341', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_precpt': SlotDefinition(name='season_precpt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The average of all seasonal precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.', alt_descriptions={}, title='average seasonal precipitation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'check validation & examples. always mm? so value only? Or value + unit', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'check validation & examples. always mm? so value only? Or value + unit'], notes=['mean and average are the same thing, but it seems like bad practice to not be consistent. Changed mean to average', 'mean and average are the same thing, but it seems like bad practice to not be consistent. Changed mean to average'], comments=['Seasons are defined as spring (March, April, May), summer (June, July, August), autumn (September, October, November) and winter (December, January, February).'], examples=[Example(value='0.4 inch', description=None, object=None), Example(value='10.16 mm', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000645', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_temp': SlotDefinition(name='season_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Mean seasonal temperature', alt_descriptions={}, title='mean seasonal temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='18 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean seasonal temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000643', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sieving': SlotDefinition(name='sieving', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Collection design of pooled samples and/or sieve size and amount of sample sieved', alt_descriptions={}, title='composite design/sieving', deprecated=None, todos=['check validation and examples', 'check validation and examples'], notes=[], comments=['Describe how samples were composited or sieved.', \"Use 'sample link' to indicate which samples were combined.\"], examples=[Example(value='combined 2 cores', description=None, object=None), Example(value='4mm sieved', description=None, object=None), Example(value='4 mm sieved and homogenized', description=None, object=None), Example(value='50 g', description=None, object=None), Example(value='5 cores', description=None, object=None), Example(value='2 mm sieved', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{{text}|{float} {unit}};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000322', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_low': SlotDefinition(name='size_frac_low', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction lower threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction lower threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000735', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_up': SlotDefinition(name='size_frac_up', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction upper threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction upper threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000736', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slope_aspect': SlotDefinition(name='slope_aspect', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The direction a slope faces. While looking down a slope use a compass to record the direction you are facing (direction or degrees). - This measure provides an indication of sun and wind exposure that will influence soil temperature and evapotranspiration.', alt_descriptions={}, title='slope aspect', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Aspect is the orientation of slope, measured clockwise in degrees from 0 to 360, where 0 is north-facing, 90 is east-facing, 180 is south-facing, and 270 is west-facing.'], examples=[Example(value='35', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000647', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slope_gradient': SlotDefinition(name='slope_gradient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Commonly called 'slope'. The angle between ground surface and a horizontal line (in percent). This is the direction that overland water would flow. This measure is usually taken with a hand level meter or clinometer\", alt_descriptions={}, title='slope gradient', deprecated=None, todos=['Slope is a percent. How does the validation work? Check to correct examples', 'Slope is a percent. How does the validation work? Check to correct examples'], notes=[], comments=[], examples=[Example(value='10%', description=None, object=None), Example(value='10 %', description=None, object=None), Example(value='0.1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000646', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_horizon': SlotDefinition(name='soil_horizon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specific layer in the land area which measures parallel to the soil surface and possesses physical characteristics which differ from the layers above and beneath', alt_descriptions={}, title='soil horizon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A horizon', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=32, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001082', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='soil_horizon_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_text_measure': SlotDefinition(name='soil_text_measure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative proportion of different grain sizes of mineral particles in a soil, as described using a standard system; express as % sand (50 um to 2 mm), silt (2 um to 50 um), and clay (<2 um) with textural name (e.g., silty clay loam) optional.', alt_descriptions={}, title='soil texture measurement', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil texture measurement'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000335', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_texture_meth': SlotDefinition(name='soil_texture_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining soil texture', alt_descriptions={}, title='soil texture method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil texture method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000336', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_type': SlotDefinition(name='soil_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ENVO_00001998', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of the soil type or classification. This field accepts terms under soil (http://purl.obolibrary.org/obo/ENVO_00001998). Multiple terms can be separated by pipes.', alt_descriptions={}, title='soil type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plinthosol [ENVO:00002250]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000332', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_type_meth': SlotDefinition(name='soil_type_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining soil series name or other lower-level classification', alt_descriptions={}, title='soil type method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil type method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000334', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='SpecificEcosystemEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_date_inc': SlotDefinition(name='start_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_time_inc': SlotDefinition(name='start_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'store_cond': SlotDefinition(name='store_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='storage condition type;duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Explain how the soil sample is stored (fresh/frozen/other).', alt_descriptions={}, title='storage conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-20 degree Celsius freezer;P2Y10D', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['storage conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000327', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='StoreCondEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tillage': SlotDefinition(name='tillage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Note method(s) used for tilling', alt_descriptions={}, title='history/tillage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='chisel', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/tillage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001081', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tillage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_cont_meth': SlotDefinition(name='tot_nitro_cont_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining the total nitrogen', alt_descriptions={}, title='total nitrogen content method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.2134/agronmonogr9.2.c32', description=None, object=None), Example(value='https://acsess.onlinelibrary.wiley.com/doi/full/10.2136/sssaj2009.0389?casa_token=bm0pYIUdNMgAAAAA%3AOWVRR0STHaOe-afTcTdxn5m1hM8n2ltM0wY-b1iYpYdD9dhwppk5j3LvC2IO5yhOIvyLVeQz4NZRCZo', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=49, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000338', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_c_meth': SlotDefinition(name='tot_org_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining total organic carbon', alt_descriptions={}, title='total organic carbon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.1080/07352680902776556', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000337', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_cont_soil_meth': SlotDefinition(name='water_cont_soil_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining the water content of soil', alt_descriptions={}, title='water content method', deprecated=None, todos=['Why is it soil water content method in the name but not the title? Is this slot used in other samples?', 'Soil water content can be measure MANY ways and often, multiple ways are used in one experiment (gravimetric water content and water holding capacity and water filled pore space, to name a few).', 'Should this be multi valued? How to we manage and validate this?', 'Why is it soil water content method in the name but not the title? Is this slot used in other samples?', 'Soil water content can be measure MANY ways and often, multiple ways are used in one experiment (gravimetric water content and water holding capacity and water filled pore space, to name a few).', 'Should this be multi valued? How to we manage and validate this?'], notes=[], comments=['Required if providing water content'], examples=[Example(value='J. Nat. Prod. Plant Resour., 2012, 2 (4):500-503', description=None, object=None), Example(value='https://dec.alaska.gov/applications/spar/webcalc/definitions.htm', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000323', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'watering_regm': SlotDefinition(name='watering_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Information about treatment involving an exposure to watering frequencies, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='watering regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None), Example(value='75% water holding capacity; constant', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000591', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'zinc': SlotDefinition(name='zinc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg (ppm)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of zinc in the sample', alt_descriptions={}, title='zinc', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['zinc'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other)\\\\|)*(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SoilInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'WastewaterSludgeInterface': ClassDefinition(name='WastewaterSludgeInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WastewaterSludgeInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='wastewater_sludge dh_interface', alt_descriptions={}, title='Wastewater Sludge', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'biochem_oxygen_dem', 'chem_administration', 'chem_oxygen_dem', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'efficiency_percent', 'elev', 'emulsions', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'gaseous_substances', 'geo_loc_name', 'horizon_meth', 'indust_eff_percent', 'inorg_particles', 'lat_lon', 'misc_param', 'nitrate', 'org_particles', 'organism_count', 'oxy_stat_samp', 'perturbation', 'ph', 'ph_meth', 'phosphate', 'pre_treatment', 'primary_treatment', 'reactor_type', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'WastewaterSludgeInterface_sample_link', 'secondary_treatment', 'sewage_type', 'size_frac', 'sludge_retent_time', 'sodium', 'soluble_inorg_mat', 'soluble_org_mat', 'specific_ecosystem', 'suspend_solids', 'temp', 'tertiary_treatment', 'tot_nitro', 'tot_phosphate', 'wastewater_type', 'WastewaterSludgeInterface_alkalinity', 'WastewaterSludgeInterface_biochem_oxygen_dem', 'WastewaterSludgeInterface_chem_administration', 'WastewaterSludgeInterface_chem_oxygen_dem', 'WastewaterSludgeInterface_collection_date', 'WastewaterSludgeInterface_depth', 'WastewaterSludgeInterface_ecosystem', 'WastewaterSludgeInterface_ecosystem_category', 'WastewaterSludgeInterface_ecosystem_subtype', 'WastewaterSludgeInterface_ecosystem_type', 'WastewaterSludgeInterface_efficiency_percent', 'WastewaterSludgeInterface_elev', 'WastewaterSludgeInterface_emulsions', 'WastewaterSludgeInterface_env_broad_scale', 'WastewaterSludgeInterface_env_local_scale', 'WastewaterSludgeInterface_env_medium', 'WastewaterSludgeInterface_env_package', 'WastewaterSludgeInterface_experimental_factor', 'WastewaterSludgeInterface_gaseous_substances', 'WastewaterSludgeInterface_geo_loc_name', 'WastewaterSludgeInterface_horizon_meth', 'WastewaterSludgeInterface_indust_eff_percent', 'WastewaterSludgeInterface_inorg_particles', 'WastewaterSludgeInterface_lat_lon', 'WastewaterSludgeInterface_misc_param', 'WastewaterSludgeInterface_nitrate', 'WastewaterSludgeInterface_org_particles', 'WastewaterSludgeInterface_organism_count', 'WastewaterSludgeInterface_oxy_stat_samp', 'WastewaterSludgeInterface_perturbation', 'WastewaterSludgeInterface_ph', 'WastewaterSludgeInterface_ph_meth', 'WastewaterSludgeInterface_phosphate', 'WastewaterSludgeInterface_pre_treatment', 'WastewaterSludgeInterface_primary_treatment', 'WastewaterSludgeInterface_reactor_type', 'WastewaterSludgeInterface_salinity', 'WastewaterSludgeInterface_samp_collec_device', 'WastewaterSludgeInterface_samp_collec_method', 'WastewaterSludgeInterface_samp_mat_process', 'WastewaterSludgeInterface_samp_size', 'WastewaterSludgeInterface_samp_store_dur', 'WastewaterSludgeInterface_samp_store_loc', 'WastewaterSludgeInterface_samp_store_temp', 'WastewaterSludgeInterface_secondary_treatment', 'WastewaterSludgeInterface_sewage_type', 'WastewaterSludgeInterface_size_frac', 'WastewaterSludgeInterface_sludge_retent_time', 'WastewaterSludgeInterface_sodium', 'WastewaterSludgeInterface_soluble_inorg_mat', 'WastewaterSludgeInterface_soluble_org_mat', 'WastewaterSludgeInterface_specific_ecosystem', 'WastewaterSludgeInterface_suspend_solids', 'WastewaterSludgeInterface_temp', 'WastewaterSludgeInterface_tertiary_treatment', 'WastewaterSludgeInterface_tot_nitro', 'WastewaterSludgeInterface_tot_phosphate', 'WastewaterSludgeInterface_wastewater_type', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biochem_oxygen_dem': SlotDefinition(name='biochem_oxygen_dem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Amount of dissolved oxygen needed by aerobic biological organisms in a body of water to break down organic material present in a given water sample at certain temperature over a specific time period', alt_descriptions={}, title='biochemical oxygen demand', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biochemical oxygen demand'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=296, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000653', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_oxygen_dem': SlotDefinition(name='chem_oxygen_dem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A measure of the capacity of water to consume oxygen during the decomposition of organic matter and the oxidation of inorganic chemicals such as ammonia and nitrite', alt_descriptions={}, title='chemical oxygen demand', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical oxygen demand'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=301, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000656', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'efficiency_percent': SlotDefinition(name='efficiency_percent', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Percentage of volatile solids removed from the anaerobic digestor', alt_descriptions={}, title='efficiency percent', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['efficiency percent'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=307, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000657', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emulsions': SlotDefinition(name='emulsions', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='emulsion name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount or concentration of substances such as paints, adhesives, mayonnaise, hair colorants, emulsified oils, etc.; can include multiple emulsion types', alt_descriptions={}, title='emulsions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['emulsions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=308, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000660', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_substances': SlotDefinition(name='gaseous_substances', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gaseous substance name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount or concentration of substances such as hydrogen sulfide, carbon dioxide, methane, etc.; can include multiple substances', alt_descriptions={}, title='gaseous substances', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gaseous substances'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=311, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000661', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indust_eff_percent': SlotDefinition(name='indust_eff_percent', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Percentage of industrial effluents received by wastewater treatment plant', alt_descriptions={}, title='industrial effluent percent', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['industrial effluent percent'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=332, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000662', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inorg_particles': SlotDefinition(name='inorg_particles', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='inorganic particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of particles such as sand, grit, metal particles, ceramics, etc.; can include multiple particles', alt_descriptions={}, title='inorganic particles', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inorganic particles'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=333, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000664', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_particles': SlotDefinition(name='org_particles', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of particles such as faeces, hairs, food, vomit, paper fibers, plant material, humus, etc.', alt_descriptions={}, title='organic particles', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic particles'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=338, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000665', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pre_treatment': SlotDefinition(name='pre_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pre-treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process of pre-treatment removes materials that can be easily collected from the raw wastewater', alt_descriptions={}, title='pre-treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pre-treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=342, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000348', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'primary_treatment': SlotDefinition(name='primary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='primary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process to produce both a generally homogeneous liquid capable of being treated biologically and a sludge that can be separately treated or processed', alt_descriptions={}, title='primary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=343, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000349', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reactor_type': SlotDefinition(name='reactor_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='reactor type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Anaerobic digesters can be designed and engineered to operate using a number of different process configurations, as batch or continuous, mesophilic, high solid or low solid, and single stage or multistage', alt_descriptions={}, title='reactor type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reactor type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=346, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000350', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'secondary_treatment': SlotDefinition(name='secondary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='secondary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process for substantially degrading the biological content of the sewage', alt_descriptions={}, title='secondary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['secondary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=360, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000351', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sewage_type': SlotDefinition(name='sewage_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='sewage type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of wastewater treatment plant as municipial or industrial', alt_descriptions={}, title='sewage type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sewage type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=361, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000215', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sludge_retent_time': SlotDefinition(name='sludge_retent_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='hours', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The time activated sludge remains in reactor', alt_descriptions={}, title='sludge retention time', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sludge retention time'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=362, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000669', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_inorg_mat': SlotDefinition(name='soluble_inorg_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='soluble inorganic material name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances such as ammonia, road-salt, sea-salt, cyanide, hydrogen sulfide, thiocyanates, thiosulfates, etc.', alt_descriptions={}, title='soluble inorganic material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble inorganic material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=364, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000672', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_org_mat': SlotDefinition(name='soluble_org_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='soluble organic material name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances such as urea, fruit sugars, soluble proteins, drugs, pharmaceuticals, etc.', alt_descriptions={}, title='soluble organic material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble organic material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=365, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000673', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tertiary_treatment': SlotDefinition(name='tertiary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='tertiary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process providing a final treatment stage to raise the effluent quality before it is discharged to the receiving environment', alt_descriptions={}, title='tertiary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tertiary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=374, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000352', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosphate': SlotDefinition(name='tot_phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total amount or concentration of phosphate', alt_descriptions={}, title='total phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=378, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000689', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wastewater_type': SlotDefinition(name='wastewater_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='wastewater type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The origin of wastewater such as human waste, rainfall, storm drains, etc.', alt_descriptions={}, title='wastewater type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wastewater type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=385, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000353', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:WastewaterSludgeInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'WaterInterface': ClassDefinition(name='WaterInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WaterInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='water dh_interface', alt_descriptions={}, title='Water', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkalinity_method', 'alkyl_diethers', 'aminopept_act', 'ammonium', 'atmospheric_data', 'bac_prod', 'bac_resp', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'conduc', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_inorg_nitro', 'diss_inorg_phosp', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'down_par', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'fluor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'light_intensity', 'mean_frict_vel', 'mean_peak_frict_vel', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'part_org_nitro', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'photon_flux', 'potassium', 'pressure', 'primary_prod', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'WaterInterface_sample_link', 'silicate', 'size_frac', 'size_frac_low', 'size_frac_up', 'sodium', 'soluble_react_phosp', 'specific_ecosystem', 'sulfate', 'sulfide', 'suspend_part_matter', 'temp', 'tidal_stage', 'tot_depth_water_col', 'tot_diss_nitro', 'tot_inorg_nitro', 'tot_nitro', 'tot_part_carb', 'turbidity', 'water_current', 'WaterInterface_alkalinity', 'WaterInterface_alkalinity_method', 'WaterInterface_alkyl_diethers', 'WaterInterface_aminopept_act', 'WaterInterface_ammonium', 'WaterInterface_atmospheric_data', 'WaterInterface_bac_prod', 'WaterInterface_bac_resp', 'WaterInterface_bacteria_carb_prod', 'WaterInterface_biomass', 'WaterInterface_bishomohopanol', 'WaterInterface_bromide', 'WaterInterface_calcium', 'WaterInterface_carb_nitro_ratio', 'WaterInterface_chem_administration', 'WaterInterface_chloride', 'WaterInterface_chlorophyll', 'WaterInterface_collection_date', 'WaterInterface_conduc', 'WaterInterface_density', 'WaterInterface_depth', 'WaterInterface_diether_lipids', 'WaterInterface_diss_carb_dioxide', 'WaterInterface_diss_hydrogen', 'WaterInterface_diss_inorg_carb', 'WaterInterface_diss_inorg_nitro', 'WaterInterface_diss_inorg_phosp', 'WaterInterface_diss_org_carb', 'WaterInterface_diss_org_nitro', 'WaterInterface_diss_oxygen', 'WaterInterface_down_par', 'WaterInterface_ecosystem', 'WaterInterface_ecosystem_category', 'WaterInterface_ecosystem_subtype', 'WaterInterface_ecosystem_type', 'WaterInterface_elev', 'WaterInterface_env_broad_scale', 'WaterInterface_env_local_scale', 'WaterInterface_env_medium', 'WaterInterface_env_package', 'WaterInterface_experimental_factor', 'WaterInterface_fluor', 'WaterInterface_geo_loc_name', 'WaterInterface_glucosidase_act', 'WaterInterface_horizon_meth', 'WaterInterface_lat_lon', 'WaterInterface_light_intensity', 'WaterInterface_mean_frict_vel', 'WaterInterface_mean_peak_frict_vel', 'WaterInterface_misc_param', 'WaterInterface_n_alkanes', 'WaterInterface_nitrate', 'WaterInterface_nitrite', 'WaterInterface_nitro', 'WaterInterface_org_carb', 'WaterInterface_org_matter', 'WaterInterface_org_nitro', 'WaterInterface_organism_count', 'WaterInterface_oxy_stat_samp', 'WaterInterface_part_org_carb', 'WaterInterface_part_org_nitro', 'WaterInterface_perturbation', 'WaterInterface_petroleum_hydrocarb', 'WaterInterface_ph', 'WaterInterface_ph_meth', 'WaterInterface_phaeopigments', 'WaterInterface_phosphate', 'WaterInterface_phosplipid_fatt_acid', 'WaterInterface_photon_flux', 'WaterInterface_potassium', 'WaterInterface_pressure', 'WaterInterface_primary_prod', 'WaterInterface_redox_potential', 'WaterInterface_salinity', 'WaterInterface_samp_collec_device', 'WaterInterface_samp_collec_method', 'WaterInterface_samp_mat_process', 'WaterInterface_samp_size', 'WaterInterface_samp_store_dur', 'WaterInterface_samp_store_loc', 'WaterInterface_samp_store_temp', 'WaterInterface_silicate', 'WaterInterface_size_frac', 'WaterInterface_size_frac_low', 'WaterInterface_size_frac_up', 'WaterInterface_sodium', 'WaterInterface_soluble_react_phosp', 'WaterInterface_specific_ecosystem', 'WaterInterface_sulfate', 'WaterInterface_sulfide', 'WaterInterface_suspend_part_matter', 'WaterInterface_temp', 'WaterInterface_tidal_stage', 'WaterInterface_tot_depth_water_col', 'WaterInterface_tot_diss_nitro', 'WaterInterface_tot_inorg_nitro', 'WaterInterface_tot_nitro', 'WaterInterface_tot_part_carb', 'WaterInterface_turbidity', 'WaterInterface_water_current', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'atmospheric_data': SlotDefinition(name='atmospheric_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='atmospheric data name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Measurement of atmospheric data; can include multiple data', alt_descriptions={}, title='atmospheric data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wind speed;9 knots', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['atmospheric data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=219, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0001097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bac_prod': SlotDefinition(name='bac_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Bacterial production in the water column measured by isotope uptake', alt_descriptions={}, title='bacterial production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter per day', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=220, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000683', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bac_resp': SlotDefinition(name='bac_resp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day, micromole oxygen per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial respiration in the water column', alt_descriptions={}, title='bacterial respiration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 micromole oxygen per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial respiration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=221, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000684', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conduc': SlotDefinition(name='conduc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliSiemens per centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Electrical conductivity of water', alt_descriptions={}, title='conductivity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 milliSiemens per centimeter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['conductivity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=222, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000692', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_nitro': SlotDefinition(name='diss_inorg_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic nitrogen', alt_descriptions={}, title='dissolved inorganic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='761 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=223, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000698', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'down_par': SlotDefinition(name='down_par', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microEinstein per square meter per second, microEinstein per square centimeter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Visible waveband radiance and irradiance measurements in the water column', alt_descriptions={}, title='downward PAR', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='28.71 microEinstein per square meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['downward PAR'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=225, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000703', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS', alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:0001779]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fluor': SlotDefinition(name='fluor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram chlorophyll a per cubic meter, volts', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Raw or converted fluorescence of water', alt_descriptions={}, title='fluorescence', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 volts', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fluorescence'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=226, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000704', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{term}: {term}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='soil horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?'], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {float}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_intensity': SlotDefinition(name='light_intensity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of light intensity', alt_descriptions={}, title='light intensity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 lux', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light intensity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=227, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000706', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other)\\\\|)*(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_nitro': SlotDefinition(name='part_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic nitrogen', alt_descriptions={}, title='particulate organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=228, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000719', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ph measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'photon_flux': SlotDefinition(name='photon_flux', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of photons per second per unit area', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of photon flux', alt_descriptions={}, title='photon flux', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='3.926 micromole photons per second per square meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['photon flux'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=229, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000725', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'primary_prod': SlotDefinition(name='primary_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day, gram per square meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of primary production, generally measured as isotope uptake', alt_descriptions={}, title='primary production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 milligram per cubic meter per day', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=230, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000728', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which sample was stored, e.g. -80 degree Celsius', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_low': SlotDefinition(name='size_frac_low', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction lower threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction lower threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000735', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_up': SlotDefinition(name='size_frac_up', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction upper threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 micrometer', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction upper threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000736', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_react_phosp': SlotDefinition(name='soluble_react_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of soluble reactive phosphorus', alt_descriptions={}, title='soluble reactive phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble reactive phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=231, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000738', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_part_matter': SlotDefinition(name='suspend_part_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of suspended particulate matter', alt_descriptions={}, title='suspended particulate matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended particulate matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=232, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000741', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tidal_stage': SlotDefinition(name='tidal_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of tide', alt_descriptions={}, title='tidal stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='high tide', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tidal stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000750', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tidal_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_depth_water_col': SlotDefinition(name='tot_depth_water_col', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of total depth of water column', alt_descriptions={}, title='total depth of water column', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 meter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total depth of water column'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000634', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_diss_nitro': SlotDefinition(name='tot_diss_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total dissolved nitrogen concentration, reported as nitrogen, measured by: total dissolved nitrogen = NH4 + NO3NO2 + dissolved organic nitrogen', alt_descriptions={}, title='total dissolved nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='40 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total dissolved nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=233, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000744', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_inorg_nitro': SlotDefinition(name='tot_inorg_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total inorganic nitrogen content', alt_descriptions={}, title='total inorganic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='40 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total inorganic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=234, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000745', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_part_carb': SlotDefinition(name='tot_part_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total particulate carbon content', alt_descriptions={}, title='total particulate carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='35 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total particulate carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=235, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000747', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_current': SlotDefinition(name='water_current', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per second, knots', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of magnitude and direction of flow within a fluid', alt_descriptions={}, title='water current', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 cubic meter per second', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water current'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=236, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000203', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:WaterInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DhMultiviewCommonColumnsMixin': ClassDefinition(name='DhMultiviewCommonColumnsMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DhMultiviewCommonColumnsMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with DhMutliviewCommon Columns', alt_descriptions={}, title='Dh Mutliview Common Columns', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id', 'DhMultiviewCommonColumnsMixin_samp_name', 'DhMultiviewCommonColumnsMixin_source_mat_id', 'DhMultiviewCommonColumnsMixin_oxy_stat_samp'], slot_usage={'analysis_type': SlotDefinition(name='analysis_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select all the data types associated or available for this biosample', alt_descriptions={}, title='analysis/data type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='metagenomics; metabolomics; proteomics', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:investigation_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='analysis_type_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_name': SlotDefinition(name='samp_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A local identifier or name that for the material sample collected. Refers to the original material collected or to any derived sub-samples.', alt_descriptions={}, title='sample name', deprecated=None, todos=[], notes=[], comments=['It can have any format, but we suggest that you make it concise, unique and consistent within your lab, and as informative as possible.'], examples=[Example(value='Rock core CB1178(5-6) from NSW', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001107', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_mat_id': SlotDefinition(name='source_mat_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A globally unique identifier assigned to the biological sample.', alt_descriptions={}, title='source material identifier', deprecated=None, todos=['Currently, the comments say to use UUIDs. However, if we implement assigning NMDC identifiers with the minter we dont need to require a GUID. It can be an optional field to fill out only if they already have a resolvable ID.', 'Currently, the comments say to use UUIDs. However, if we implement assigning NMDC identifiers with the minter we dont need to require a GUID. It can be an optional field to fill out only if they already have a resolvable ID.'], notes=['The source material IS the Globally Unique ID'], comments=['Identifiers must be prefixed. Possible FAIR prefixes are IGSNs (http://www.geosamples.org/getigsn), NCBI biosample accession numbers, ARK identifiers (https://arks.org/). These IDs enable linking to derived analytes and subsamples. If you have not assigned FAIR identifiers to your samples, you can generate UUIDs (https://www.uuidgenerator.net/).', 'Identifiers must be prefixed. Possible FAIR prefixes are IGSNs (http://www.geosamples.org/getigsn), NCBI biosample accession numbers, ARK identifiers (https://arks.org/). These IDs enable linking to derived analytes and subsamples. If you have not assigned FAIR identifiers to your samples, you can generate UUIDs (https://www.uuidgenerator.net/).'], examples=[Example(value='IGSN:AU1243', description=None, object=None), Example(value='UUID:24f1467a-40f4-11ed-b878-0242ac120002', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0000026', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:DhMultiviewCommonColumnsMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SampIdNewTermsMixin': ClassDefinition(name='SampIdNewTermsMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampIdNewTermsMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with SampIdNew Terms', alt_descriptions={}, title='SampId New Terms', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['sample_link'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:SampIdNewTermsMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SoilMixsInspiredMixin': ClassDefinition(name='SoilMixsInspiredMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilMixsInspiredMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with SoilMixsInspired Terms', alt_descriptions={}, title='Soil MIxS Inspired Mixin', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['SoilMixsInspiredMixin_collection_date_inc', 'SoilMixsInspiredMixin_collection_time', 'SoilMixsInspiredMixin_collection_time_inc', 'SoilMixsInspiredMixin_experimental_factor_other', 'SoilMixsInspiredMixin_filter_method', 'SoilMixsInspiredMixin_isotope_exposure', 'SoilMixsInspiredMixin_micro_biomass_c_meth', 'SoilMixsInspiredMixin_micro_biomass_n_meth', 'SoilMixsInspiredMixin_microbial_biomass_c', 'SoilMixsInspiredMixin_microbial_biomass_n', 'SoilMixsInspiredMixin_non_microb_biomass', 'SoilMixsInspiredMixin_non_microb_biomass_method', 'SoilMixsInspiredMixin_org_nitro_method', 'SoilMixsInspiredMixin_other_treatment', 'SoilMixsInspiredMixin_start_date_inc', 'SoilMixsInspiredMixin_start_time_inc', 'collection_date_inc', 'collection_time', 'collection_time_inc', 'experimental_factor_other', 'filter_method', 'isotope_exposure', 'micro_biomass_c_meth', 'micro_biomass_n_meth', 'microbial_biomass_c', 'microbial_biomass_n', 'non_microb_biomass', 'non_microb_biomass_method', 'org_nitro_method', 'other_treatment', 'start_date_inc', 'start_time_inc'], slot_usage={'collection_date_inc': SlotDefinition(name='collection_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time': SlotDefinition(name='collection_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The time of sampling, either as an instance (single point) or interval.', alt_descriptions={}, title='collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time_inc': SlotDefinition(name='collection_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor_other': SlotDefinition(name='experimental_factor_other', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Other details about your sample that you feel can't be accurately represented in the available columns.\", alt_descriptions={}, title='experimental factor- other', deprecated=None, todos=[], notes=[], comments=['This slot accepts open-ended text about your sample.', 'We recommend using key:value pairs.', 'Provided pairs will be considered for inclusion as future slots/terms in this data collection template.'], examples=[Example(value='experimental treatment: value', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:experimental_factor|additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_method': SlotDefinition(name='filter_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of filter used or how the sample was filtered', alt_descriptions={}, title='filter method', deprecated=None, todos=[], notes=[], comments=['describe the filter or provide a catalog number and manufacturer'], examples=[Example(value='C18', description=None, object=None), Example(value='Basix PES, 13-100-106 FisherSci', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:filter_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'isotope_exposure': SlotDefinition(name='isotope_exposure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='List isotope exposure or addition applied to your sample.', alt_descriptions={}, title='isotope exposure/addition', deprecated=None, todos=['Can we make the H218O correctly super and subscripted?'], notes=[], comments=['This is required when your experimental design includes the use of isotopically labeled compounds'], examples=[Example(value='13C glucose', description=None, object=None), Example(value='H218O', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:chem_administration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}; {timestamp}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]; ([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_c_meth': SlotDefinition(name='micro_biomass_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass carbon', alt_descriptions={}, title='microbial biomass carbon method', deprecated=None, todos=['How should we separate values? | or ;? lets be consistent'], notes=[], comments=['required if \"microbial_biomass_c\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_n_meth': SlotDefinition(name='micro_biomass_n_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass nitrogen', alt_descriptions={}, title='microbial biomass nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"microbial_biomass_n\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_c': SlotDefinition(name='microbial_biomass_c', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass carbon', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug C/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_n': SlotDefinition(name='microbial_biomass_n', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass nitrogen', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug N/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass': SlotDefinition(name='non_microb_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Amount of biomass; should include the name for the part of biomass measured, e.g.insect, plant, total. Can include multiple measurements separated by ;', alt_descriptions={}, title='non-microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='insect 0.23 ug; plant 1g', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:biomass|microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass_method': SlotDefinition(name='non_microb_biomass_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining biomass', alt_descriptions={}, title='non-microbial biomass method', deprecated=None, todos=[], notes=[], comments=['required if \"non-microbial biomass\" is provided'], examples=[Example(value='https://doi.org/10.1038/s41467-021-26181-3', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro_method': SlotDefinition(name='org_nitro_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Method used for obtaining organic nitrogen', alt_descriptions={}, title='organic nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"org_nitro\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(85)90144-0', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:org_nitro|tot_nitro_cont_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'other_treatment': SlotDefinition(name='other_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Other treatments applied to your samples that are not applicable to the provided fields', alt_descriptions={}, title='other treatments', deprecated=None, todos=[], notes=[], comments=['This is an open text field to provide any treatments that cannot be captured in the provided slots.'], examples=[], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_date_inc': SlotDefinition(name='start_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_time_inc': SlotDefinition(name='start_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SoilMixsInspiredMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DhInterface': ClassDefinition(name='DhInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DhInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='One DataHarmonizer interface, for the specified combination of a checklist, enviornmental_package, and various standards, user facilities or analysis types', alt_descriptions={}, title='Dh Root Interface', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:DhInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SampleData': ClassDefinition(name='SampleData', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleData', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='represents data produced by the DataHarmonizer tabs of the submission portal', alt_descriptions={}, title='SampleData', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['air_data', 'biofilm_data', 'built_env_data', 'host_associated_data', 'plant_associated_data', 'sediment_data', 'soil_data', 'wastewater_sludge_data', 'water_data', 'emsl_data', 'jgi_mg_data', 'jgi_mt_data'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:SampleData', subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'NamedThing': ClassDefinition(name='NamedThing', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/NamedThing', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a databased entity or concept/class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'name', 'description', 'alternative_identifiers'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:NamedThing', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}" ; - linkml:enums "{'AnalysisTypeEnum': EnumDefinition(name='AnalysisTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AnalysisTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metabolomics': PermissibleValue(text='metabolomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metagenomics': PermissibleValue(text='metagenomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metaproteomics': PermissibleValue(text='metaproteomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metatranscriptomics': PermissibleValue(text='metatranscriptomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural organic matter': PermissibleValue(text='natural organic matter', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'BioticRelationshipEnum': EnumDefinition(name='BioticRelationshipEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BioticRelationshipEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'commensalism': PermissibleValue(text='commensalism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='samp_biotic_relationship', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['biotic_relationship_enum: free living', 'parasitism', 'commensalism', 'symbiotic', 'mutualism'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/biotic_relationship_enum/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'free living': PermissibleValue(text='free living', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mutualism': PermissibleValue(text='mutualism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'parasitism': PermissibleValue(text='parasitism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'symbiotic': PermissibleValue(text='symbiotic', description='placeholder enum descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'JgiContTypeEnum': EnumDefinition(name='JgiContTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiContTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'plate': PermissibleValue(text='plate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tube': PermissibleValue(text='tube', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'DnaSampleFormatEnum': EnumDefinition(name='DnaSampleFormatEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemCategoryEnum': EnumDefinition(name='EcosystemCategoryEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemCategoryEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Terrestrial': PermissibleValue(text='Terrestrial', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://github.com/microbiomedata/sheets_and_friends/issues/22'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemEnum': EnumDefinition(name='EcosystemEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Environmental': PermissibleValue(text='Environmental', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemSubtypeEnum': EnumDefinition(name='EcosystemSubtypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemSubtypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Biocrust': PermissibleValue(text='Biocrust', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Biofilm': PermissibleValue(text='Biofilm', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bulk soil': PermissibleValue(text='Bulk soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Clay': PermissibleValue(text='Clay', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Floodplain': PermissibleValue(text='Floodplain', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fossil': PermissibleValue(text='Fossil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Glacier': PermissibleValue(text='Glacier', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Loam': PermissibleValue(text='Loam', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mineral horizon': PermissibleValue(text='Mineral horizon', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Nature reserve': PermissibleValue(text='Nature reserve', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Organic layer': PermissibleValue(text='Organic layer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paddy field/soil': PermissibleValue(text='Paddy field/soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pasture': PermissibleValue(text='Pasture', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Peat': PermissibleValue(text='Peat', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ranch': PermissibleValue(text='Ranch', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sand': PermissibleValue(text='Sand', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silt': PermissibleValue(text='Silt', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Soil crust': PermissibleValue(text='Soil crust', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unclassified': PermissibleValue(text='Unclassified', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Watershed': PermissibleValue(text='Watershed', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Wetlands': PermissibleValue(text='Wetlands', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemTypeEnum': EnumDefinition(name='EcosystemTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Soil': PermissibleValue(text='Soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvPackageEnum': EnumDefinition(name='EnvPackageEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvPackageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[\"I don't think this is a MIxS term anymore, so it make sense to define it here\"], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'GrowthFacilEnum': EnumDefinition(name='GrowthFacilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GrowthFacilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'experimental_garden': PermissibleValue(text='experimental_garden', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='growth_facility', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string range according to MIxS'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/growth_facil/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field': PermissibleValue(text='field', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field_incubation': PermissibleValue(text='field_incubation', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glasshouse': PermissibleValue(text='glasshouse', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'greenhouse': PermissibleValue(text='greenhouse', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'growth_chamber': PermissibleValue(text='growth_chamber', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lab_incubation': PermissibleValue(text='lab_incubation', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'open_top_chamber': PermissibleValue(text='open_top_chamber', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'RelToOxygenEnum': EnumDefinition(name='RelToOxygenEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RelToOxygenEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobe': PermissibleValue(text='aerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='oxygen_relationship', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/rel_to_oxygen_enum/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobe': PermissibleValue(text='anaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'facultative': PermissibleValue(text='facultative', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'microaerophilic': PermissibleValue(text='microaerophilic', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'microanaerobe': PermissibleValue(text='microanaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'obligate aerobe': PermissibleValue(text='obligate aerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'obligate anaerobe': PermissibleValue(text='obligate anaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'RnaSampleFormatEnum': EnumDefinition(name='RnaSampleFormatEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'SampleTypeEnum': EnumDefinition(name='SampleTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water_extract_soil': PermissibleValue(text='water_extract_soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'SpecificEcosystemEnum': EnumDefinition(name='SpecificEcosystemEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SpecificEcosystemEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Agricultural': PermissibleValue(text='Agricultural', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Agricultural land': PermissibleValue(text='Agricultural land', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Agricultural soil': PermissibleValue(text='Agricultural soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Alpine': PermissibleValue(text='Alpine', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bog': PermissibleValue(text='Bog', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Boreal forest': PermissibleValue(text='Boreal forest', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Contaminated': PermissibleValue(text='Contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Desert': PermissibleValue(text='Desert', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Farm': PermissibleValue(text='Farm', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Forest soil': PermissibleValue(text='Forest soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Forest Soil': PermissibleValue(text='Forest Soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Grasslands': PermissibleValue(text='Grasslands', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Meadow': PermissibleValue(text='Meadow', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mine': PermissibleValue(text='Mine', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mine drainage': PermissibleValue(text='Mine drainage', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Oil-contaminated': PermissibleValue(text='Oil-contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Orchard soil': PermissibleValue(text='Orchard soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permafrost': PermissibleValue(text='Permafrost', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Riparian soil': PermissibleValue(text='Riparian soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'River': PermissibleValue(text='River', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shrubland': PermissibleValue(text='Shrubland', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tropical rainforest': PermissibleValue(text='Tropical rainforest', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unclassified': PermissibleValue(text='Unclassified', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Uranium contaminated': PermissibleValue(text='Uranium contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'StoreCondEnum': EnumDefinition(name='StoreCondEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/StoreCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'fresh': PermissibleValue(text='fresh', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='storage_condt', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['see samp_store_dur, samp_store_loc, samp_store_temp and store_cond (which takes a string range according to mixs-source).'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frozen': PermissibleValue(text='frozen', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lyophilized': PermissibleValue(text='lyophilized', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'YesNoEnum': EnumDefinition(name='YesNoEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/YesNoEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='replaces DnaDnaseEnum and DnaseRnaEnum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'no': PermissibleValue(text='no', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'yes': PermissibleValue(text='yes', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvBroadScaleSoilEnum': EnumDefinition(name='EnvBroadScaleSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvBroadScaleSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'arid biome [ENVO:01001838]': PermissibleValue(text='arid biome [ENVO:01001838]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subalpine biome [ENVO:01001837]': PermissibleValue(text='subalpine biome [ENVO:01001837]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'montane biome [ENVO:01001836]': PermissibleValue(text='montane biome [ENVO:01001836]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__montane savanna biome [ENVO:01000223]': PermissibleValue(text='__montane savanna biome [ENVO:01000223]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__montane shrubland biome [ENVO:01000216]': PermissibleValue(text='__montane shrubland biome [ENVO:01000216]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alpine biome [ENVO:01001835]': PermissibleValue(text='alpine biome [ENVO:01001835]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alpine tundra biome [ENVO:01001505]': PermissibleValue(text='__alpine tundra biome [ENVO:01001505]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subpolar biome [ENVO:01001834]': PermissibleValue(text='subpolar biome [ENVO:01001834]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subtropical biome [ENVO:01001832]': PermissibleValue(text='subtropical biome [ENVO:01001832]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mediterranean biome [ENVO:01001833]': PermissibleValue(text='__mediterranean biome [ENVO:01001833]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean savanna biome [ENVO:01000229]': PermissibleValue(text='____mediterranean savanna biome [ENVO:01000229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean shrubland biome [ENVO:01000217]': PermissibleValue(text='____mediterranean shrubland biome [ENVO:01000217]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean woodland biome [ENVO:01000208]': PermissibleValue(text='____mediterranean woodland biome [ENVO:01000208]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical woodland biome [ENVO:01000222]': PermissibleValue(text='__subtropical woodland biome [ENVO:01000222]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical shrubland biome [ENVO:01000213]': PermissibleValue(text='__subtropical shrubland biome [ENVO:01000213]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical savanna biome [ENVO:01000187]': PermissibleValue(text='__subtropical savanna biome [ENVO:01000187]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'temperate biome [ENVO:01001831]': PermissibleValue(text='temperate biome [ENVO:01001831]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate woodland biome [ENVO:01000221]': PermissibleValue(text='__temperate woodland biome [ENVO:01000221]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate shrubland biome [ENVO:01000215]': PermissibleValue(text='__temperate shrubland biome [ENVO:01000215]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate savanna biome [ENVO:01000189]': PermissibleValue(text='__temperate savanna biome [ENVO:01000189]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical biome [ENVO:01001830]': PermissibleValue(text='tropical biome [ENVO:01001830]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical woodland biome [ENVO:01000220]': PermissibleValue(text='__tropical woodland biome [ENVO:01000220]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical shrubland biome [ENVO:01000214]': PermissibleValue(text='__tropical shrubland biome [ENVO:01000214]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical savanna biome [ENVO:01000188]': PermissibleValue(text='__tropical savanna biome [ENVO:01000188]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'polar biome [ENVO:01000339]': PermissibleValue(text='polar biome [ENVO:01000339]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrestrial biome [ENVO:00000446]': PermissibleValue(text='terrestrial biome [ENVO:00000446]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__anthropogenic terrestrial biome [ENVO:01000219]': PermissibleValue(text='__anthropogenic terrestrial biome [ENVO:01000219]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____dense settlement biome [ENVO:01000248]': PermissibleValue(text='____dense settlement biome [ENVO:01000248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______urban biome [ENVO:01000249]': PermissibleValue(text='______urban biome [ENVO:01000249]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____rangeland biome [ENVO:01000247]': PermissibleValue(text='____rangeland biome [ENVO:01000247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____village biome [ENVO:01000246]': PermissibleValue(text='____village biome [ENVO:01000246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mangrove biome [ENVO:01000181]': PermissibleValue(text='__mangrove biome [ENVO:01000181]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tundra biome [ENVO:01000180]': PermissibleValue(text='__tundra biome [ENVO:01000180]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____alpine tundra biome [ENVO:01001505]': PermissibleValue(text='____alpine tundra biome [ENVO:01001505]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__shrubland biome [ENVO:01000176]': PermissibleValue(text='__shrubland biome [ENVO:01000176]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tidal mangrove shrubland [ENVO:01001369]': PermissibleValue(text='____tidal mangrove shrubland [ENVO:01001369]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____xeric shrubland biome [ENVO:01000218]': PermissibleValue(text='____xeric shrubland biome [ENVO:01000218]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____montane shrubland biome [ENVO:01000216]': PermissibleValue(text='____montane shrubland biome [ENVO:01000216]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____temperate shrubland biome [ENVO:01000215]': PermissibleValue(text='____temperate shrubland biome [ENVO:01000215]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tropical shrubland biome [ENVO:01000214]': PermissibleValue(text='____tropical shrubland biome [ENVO:01000214]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____subtropical shrubland biome [ENVO:01000213]': PermissibleValue(text='____subtropical shrubland biome [ENVO:01000213]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______mediterranean shrubland biome [ENVO:01000217]': PermissibleValue(text='______mediterranean shrubland biome [ENVO:01000217]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__woodland biome [ENVO:01000175]': PermissibleValue(text='__woodland biome [ENVO:01000175]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____subtropical woodland biome [ENVO:01000222]': PermissibleValue(text='____subtropical woodland biome [ENVO:01000222]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______mediterranean woodland biome [ENVO:01000208]': PermissibleValue(text='______mediterranean woodland biome [ENVO:01000208]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____temperate woodland biome [ENVO:01000221]': PermissibleValue(text='____temperate woodland biome [ENVO:01000221]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tropical woodland biome [ENVO:01000220]': PermissibleValue(text='____tropical woodland biome [ENVO:01000220]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____savanna biome [ENVO:01000178]': PermissibleValue(text='____savanna biome [ENVO:01000178]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______montane savanna biome [ENVO:01000223]': PermissibleValue(text='______montane savanna biome [ENVO:01000223]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______flooded savanna biome [ENVO:01000190]': PermissibleValue(text='______flooded savanna biome [ENVO:01000190]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______temperate savanna biome [ENVO:01000189]': PermissibleValue(text='______temperate savanna biome [ENVO:01000189]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______tropical savanna biome [ENVO:01000188]': PermissibleValue(text='______tropical savanna biome [ENVO:01000188]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______subtropical savanna biome [ENVO:01000187]': PermissibleValue(text='______subtropical savanna biome [ENVO:01000187]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________mediterranean savanna biome [ENVO:01000229]': PermissibleValue(text='________mediterranean savanna biome [ENVO:01000229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvMediumSoilEnum': EnumDefinition(name='EnvMediumSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvMediumSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'pathogen-suppressive soil [ENVO:03600036]': PermissibleValue(text='pathogen-suppressive soil [ENVO:03600036]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mangrove biome soil [ENVO:02000138]': PermissibleValue(text='mangrove biome soil [ENVO:02000138]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'surface soil [ENVO:02000059]': PermissibleValue(text='surface soil [ENVO:02000059]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frost-susceptible soil [ENVO:01001638]': PermissibleValue(text='frost-susceptible soil [ENVO:01001638]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bare soil [ENVO:01001616]': PermissibleValue(text='bare soil [ENVO:01001616]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frozen soil [ENVO:01001526]': PermissibleValue(text='frozen soil [ENVO:01001526]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__friable-frozen soil [ENVO:01001528]': PermissibleValue(text='__friable-frozen soil [ENVO:01001528]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__plastic-frozen soil [ENVO:01001527]': PermissibleValue(text='__plastic-frozen soil [ENVO:01001527]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__hard-frozen soil [ENVO:01001525]': PermissibleValue(text='__hard-frozen soil [ENVO:01001525]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__frozen compost soil [ENVO:00005765]': PermissibleValue(text='__frozen compost soil [ENVO:00005765]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__cryosol [ENVO:00002236]': PermissibleValue(text='__cryosol [ENVO:00002236]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ultisol [ENVO:01001397]': PermissibleValue(text='ultisol [ENVO:01001397]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__acrisol [ENVO:00002234]': PermissibleValue(text='__acrisol [ENVO:00002234]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'acidic soil [ENVO:01001185]': PermissibleValue(text='acidic soil [ENVO:01001185]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bulk soil [ENVO:00005802]': PermissibleValue(text='bulk soil [ENVO:00005802]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'red soil [ENVO:00005790]': PermissibleValue(text='red soil [ENVO:00005790]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'upland soil [ENVO:00005786]': PermissibleValue(text='upland soil [ENVO:00005786]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mountain forest soil [ENVO:00005769]': PermissibleValue(text='__mountain forest soil [ENVO:00005769]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__dune soil [ENVO:00002260]': PermissibleValue(text='__dune soil [ENVO:00002260]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ornithogenic soil [ENVO:00005782]': PermissibleValue(text='ornithogenic soil [ENVO:00005782]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'heat stressed soil [ENVO:00005781]': PermissibleValue(text='heat stressed soil [ENVO:00005781]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'greenhouse soil [ENVO:00005780]': PermissibleValue(text='greenhouse soil [ENVO:00005780]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical soil [ENVO:00005778]': PermissibleValue(text='tropical soil [ENVO:00005778]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pasture soil [ENVO:00005773]': PermissibleValue(text='pasture soil [ENVO:00005773]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'muddy soil [ENVO:00005771]': PermissibleValue(text='muddy soil [ENVO:00005771]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orchid soil [ENVO:00005768]': PermissibleValue(text='orchid soil [ENVO:00005768]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'manured soil [ENVO:00005767]': PermissibleValue(text='manured soil [ENVO:00005767]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'limed soil [ENVO:00005766]': PermissibleValue(text='limed soil [ENVO:00005766]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pond soil [ENVO:00005764]': PermissibleValue(text='pond soil [ENVO:00005764]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'meadow soil [ENVO:00005761]': PermissibleValue(text='meadow soil [ENVO:00005761]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'burned soil [ENVO:00005760]': PermissibleValue(text='burned soil [ENVO:00005760]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lawn soil [ENVO:00005756]': PermissibleValue(text='lawn soil [ENVO:00005756]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field soil [ENVO:00005755]': PermissibleValue(text='field soil [ENVO:00005755]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__paddy field soil [ENVO:00005740]': PermissibleValue(text='__paddy field soil [ENVO:00005740]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____peaty paddy field soil [ENVO:00005776]': PermissibleValue(text='____peaty paddy field soil [ENVO:00005776]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____alluvial paddy field soil [ENVO:00005759]': PermissibleValue(text='____alluvial paddy field soil [ENVO:00005759]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fertilized soil [ENVO:00005754]': PermissibleValue(text='fertilized soil [ENVO:00005754]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sawah soil [ENVO:00005752]': PermissibleValue(text='sawah soil [ENVO:00005752]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'jungle soil [ENVO:00005751]': PermissibleValue(text='jungle soil [ENVO:00005751]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'grassland soil [ENVO:00005750]': PermissibleValue(text='grassland soil [ENVO:00005750]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__steppe soil [ENVO:00005777]': PermissibleValue(text='__steppe soil [ENVO:00005777]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__savanna soil [ENVO:00005746]': PermissibleValue(text='__savanna soil [ENVO:00005746]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farm soil [ENVO:00005749]': PermissibleValue(text='farm soil [ENVO:00005749]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__rubber plantation soil [ENVO:00005788]': PermissibleValue(text='__rubber plantation soil [ENVO:00005788]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__orchard soil [ENVO:00005772]': PermissibleValue(text='__orchard soil [ENVO:00005772]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'dry soil [ENVO:00005748]': PermissibleValue(text='dry soil [ENVO:00005748]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'compost soil [ENVO:00005747]': PermissibleValue(text='compost soil [ENVO:00005747]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'roadside soil [ENVO:00005743]': PermissibleValue(text='roadside soil [ENVO:00005743]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'arable soil [ENVO:00005742]': PermissibleValue(text='arable soil [ENVO:00005742]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alpine soil [ENVO:00005741]': PermissibleValue(text='alpine soil [ENVO:00005741]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alluvial soil [ENVO:00002871]': PermissibleValue(text='alluvial soil [ENVO:00002871]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alluvial paddy field soil [ENVO:00005759]': PermissibleValue(text='__alluvial paddy field soil [ENVO:00005759]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alluvial swamp soil [ENVO:00005758]': PermissibleValue(text='__alluvial swamp soil [ENVO:00005758]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'technosol [ENVO:00002275]': PermissibleValue(text='technosol [ENVO:00002275]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stagnosol [ENVO:00002274]': PermissibleValue(text='stagnosol [ENVO:00002274]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fluvisol [ENVO:00002273]': PermissibleValue(text='fluvisol [ENVO:00002273]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'garden soil [ENVO:00002263]': PermissibleValue(text='garden soil [ENVO:00002263]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__vegetable garden soil [ENVO:00005779]': PermissibleValue(text='__vegetable garden soil [ENVO:00005779]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__allotment garden soil [ENVO:00005744]': PermissibleValue(text='__allotment garden soil [ENVO:00005744]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clay soil [ENVO:00002262]': PermissibleValue(text='clay soil [ENVO:00002262]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forest soil [ENVO:00002261]': PermissibleValue(text='forest soil [ENVO:00002261]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__eucalyptus forest soil [ENVO:00005787]': PermissibleValue(text='__eucalyptus forest soil [ENVO:00005787]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__spruce forest soil [ENVO:00005784]': PermissibleValue(text='__spruce forest soil [ENVO:00005784]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__leafy wood soil [ENVO:00005783]': PermissibleValue(text='__leafy wood soil [ENVO:00005783]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__beech forest soil [ENVO:00005770]': PermissibleValue(text='__beech forest soil [ENVO:00005770]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'agricultural soil [ENVO:00002259]': PermissibleValue(text='agricultural soil [ENVO:00002259]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__bluegrass field soil [ENVO:00005789]': PermissibleValue(text='__bluegrass field soil [ENVO:00005789]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'loam [ENVO:00002258]': PermissibleValue(text='loam [ENVO:00002258]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__clay loam [ENVO:06105277]': PermissibleValue(text='__clay loam [ENVO:06105277]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____silty clay loam [ENVO:06105278]': PermissibleValue(text='____silty clay loam [ENVO:06105278]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____sandy clay loam [ENVO:06105276]': PermissibleValue(text='____sandy clay loam [ENVO:06105276]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__silty loam [ENVO:06105275]': PermissibleValue(text='__silty loam [ENVO:06105275]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__sandy loam [ENVO:06105274]': PermissibleValue(text='__sandy loam [ENVO:06105274]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'podzol [ENVO:00002257]': PermissibleValue(text='podzol [ENVO:00002257]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'regosol [ENVO:00002256]': PermissibleValue(text='regosol [ENVO:00002256]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solonetz [ENVO:00002255]': PermissibleValue(text='solonetz [ENVO:00002255]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vertisol [ENVO:00002254]': PermissibleValue(text='vertisol [ENVO:00002254]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'umbrisol [ENVO:00002253]': PermissibleValue(text='umbrisol [ENVO:00002253]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solonchak [ENVO:00002252]': PermissibleValue(text='solonchak [ENVO:00002252]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'planosol [ENVO:00002251]': PermissibleValue(text='planosol [ENVO:00002251]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plinthosol [ENVO:00002250]': PermissibleValue(text='plinthosol [ENVO:00002250]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'phaeozem [ENVO:00002249]': PermissibleValue(text='phaeozem [ENVO:00002249]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'luvisol [ENVO:00002248]': PermissibleValue(text='luvisol [ENVO:00002248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'nitisol [ENVO:00002247]': PermissibleValue(text='nitisol [ENVO:00002247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ferralsol [ENVO:00002246]': PermissibleValue(text='ferralsol [ENVO:00002246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsisol [ENVO:00002245]': PermissibleValue(text='gypsisol [ENVO:00002245]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gleysol [ENVO:00002244]': PermissibleValue(text='gleysol [ENVO:00002244]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'histosol [ENVO:00002243]': PermissibleValue(text='histosol [ENVO:00002243]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__peat soil [ENVO:00005774]': PermissibleValue(text='__peat soil [ENVO:00005774]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lixisol [ENVO:00002242]': PermissibleValue(text='lixisol [ENVO:00002242]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'leptosol [ENVO:00002241]': PermissibleValue(text='leptosol [ENVO:00002241]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kastanozem [ENVO:00002240]': PermissibleValue(text='kastanozem [ENVO:00002240]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'calcisol [ENVO:00002239]': PermissibleValue(text='calcisol [ENVO:00002239]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'durisol [ENVO:00002238]': PermissibleValue(text='durisol [ENVO:00002238]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chernozem [ENVO:00002237]': PermissibleValue(text='chernozem [ENVO:00002237]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cambisol [ENVO:00002235]': PermissibleValue(text='cambisol [ENVO:00002235]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'albeluvisol [ENVO:00002233]': PermissibleValue(text='albeluvisol [ENVO:00002233]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'andosol [ENVO:00002232]': PermissibleValue(text='andosol [ENVO:00002232]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__volcanic soil [ENVO:01001841]': PermissibleValue(text='__volcanic soil [ENVO:01001841]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alisol [ENVO:00002231]': PermissibleValue(text='alisol [ENVO:00002231]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anthrosol [ENVO:00002230]': PermissibleValue(text='anthrosol [ENVO:00002230]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'arenosol [ENVO:00002229]': PermissibleValue(text='arenosol [ENVO:00002229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvLocalScaleSoilEnum': EnumDefinition(name='EnvLocalScaleSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvLocalScaleSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'astronomical body part [ENVO:01000813]': PermissibleValue(text='astronomical body part [ENVO:01000813]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__coast [ENVO:01000687]': PermissibleValue(text='__coast [ENVO:01000687]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__solid astronomical body part [ENVO:00000191]': PermissibleValue(text='__solid astronomical body part [ENVO:00000191]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______landform [ENVO:01001886]': PermissibleValue(text='______landform [ENVO:01001886]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______channel [ENVO:03000117]': PermissibleValue(text='______channel [ENVO:03000117]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________tunnel [ENVO:00000068]': PermissibleValue(text='________tunnel [ENVO:00000068]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______surface landform [ENVO:01001884]': PermissibleValue(text='______surface landform [ENVO:01001884]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________desert [ENVO:01001357]': PermissibleValue(text='________desert [ENVO:01001357]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________outcrop [ENVO:01000302]': PermissibleValue(text='________outcrop [ENVO:01000302]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________boulder field [ENVO:00000537]': PermissibleValue(text='________boulder field [ENVO:00000537]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________landfill [ENVO:00000533]': PermissibleValue(text='________landfill [ENVO:00000533]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________hummock [ENVO:00000516]': PermissibleValue(text='________hummock [ENVO:00000516]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________terrace [ENVO:00000508]': PermissibleValue(text='________terrace [ENVO:00000508]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], 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PermissibleValue(text='__________lake shore [ENVO:00000382]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________dry lake [ENVO:00000277]': PermissibleValue(text='________dry lake [ENVO:00000277]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, 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structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________isthmus [ENVO:00000174]': PermissibleValue(text='________isthmus [ENVO:00000174]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________badland [ENVO:00000127]': PermissibleValue(text='________badland [ENVO:00000127]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________volcanic feature [ENVO:00000094]': PermissibleValue(text='________volcanic feature [ENVO:00000094]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, 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deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________tuff cone [ENVO:01000664]': PermissibleValue(text='____________tuff cone [ENVO:01000664]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________beach [ENVO:00000091]': PermissibleValue(text='________beach [ENVO:00000091]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________plain [ENVO:00000086]': PermissibleValue(text='________plain [ENVO:00000086]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________cave [ENVO:00000067]': PermissibleValue(text='________cave [ENVO:00000067]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, 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narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______slope [ENVO:00002000]': PermissibleValue(text='______slope [ENVO:00002000]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________talus slope [ENVO:01000334]': PermissibleValue(text='________talus slope [ENVO:01000334]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________hillside [ENVO:01000333]': PermissibleValue(text='________hillside [ENVO:01000333]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________levee [ENVO:00000178]': PermissibleValue(text='________levee [ENVO:00000178]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________bank [ENVO:00000141]': PermissibleValue(text='________bank [ENVO:00000141]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________cliff [ENVO:00000087]': PermissibleValue(text='________cliff [ENVO:00000087]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______peak [ENVO:00000480]': PermissibleValue(text='______peak [ENVO:00000480]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______depressed landform [ENVO:00000309]': PermissibleValue(text='______depressed landform [ENVO:00000309]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________geographic basin [ENVO:03000015]': PermissibleValue(text='________geographic basin [ENVO:03000015]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________valley [ENVO:00000100]': PermissibleValue(text='__________valley [ENVO:00000100]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________canyon [ENVO:00000169]': PermissibleValue(text='____________canyon [ENVO:00000169]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dry valley [ENVO:00000128]': PermissibleValue(text='____________dry valley [ENVO:00000128]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________glacial valley [ENVO:00000248]': PermissibleValue(text='____________glacial valley [ENVO:00000248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________pit [ENVO:01001871]': PermissibleValue(text='________pit [ENVO:01001871]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________trench [ENVO:01000649]': PermissibleValue(text='________trench [ENVO:01000649]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________swale [ENVO:00000543]': PermissibleValue(text='________swale [ENVO:00000543]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________crater [ENVO:00000514]': PermissibleValue(text='________crater [ENVO:00000514]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________impact crater [ENVO:01001071]': PermissibleValue(text='__________impact crater [ENVO:01001071]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________volcanic crater [ENVO:00000246]': PermissibleValue(text='__________volcanic crater [ENVO:00000246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________caldera [ENVO:00000096]': PermissibleValue(text='__________caldera [ENVO:00000096]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________channel of a watercourse [ENVO:00000395]': PermissibleValue(text='________channel of a watercourse [ENVO:00000395]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________strait [ENVO:00000394]': PermissibleValue(text='__________strait [ENVO:00000394]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________dry stream [ENVO:00000278]': PermissibleValue(text='__________dry stream [ENVO:00000278]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dry river [ENVO:01000995]': PermissibleValue(text='____________dry river [ENVO:01000995]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________artificial channel [ENVO:00000121]': PermissibleValue(text='__________artificial channel [ENVO:00000121]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________plumbing drain [ENVO:01000924]': PermissibleValue(text='____________plumbing drain [ENVO:01000924]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________ditch [ENVO:00000037]': PermissibleValue(text='____________ditch [ENVO:00000037]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________sinkhole [ENVO:00000195]': PermissibleValue(text='________sinkhole [ENVO:00000195]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______elevated landform [ENVO:00000176]': PermissibleValue(text='______elevated landform [ENVO:00000176]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________flattened elevation [ENVO:01001491]': PermissibleValue(text='________flattened elevation [ENVO:01001491]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________butte [ENVO:00000287]': PermissibleValue(text='__________butte [ENVO:00000287]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________plateau [ENVO:00000182]': PermissibleValue(text='__________plateau [ENVO:00000182]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________mesa [ENVO:00000179]': PermissibleValue(text='__________mesa [ENVO:00000179]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________pinnacle [ENVO:00000481]': PermissibleValue(text='________pinnacle [ENVO:00000481]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________mount [ENVO:00000477]': PermissibleValue(text='________mount [ENVO:00000477]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________hill [ENVO:00000083]': PermissibleValue(text='__________hill [ENVO:00000083]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dune [ENVO:00000170]': PermissibleValue(text='____________dune [ENVO:00000170]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________mountain [ENVO:00000081]': PermissibleValue(text='__________mountain [ENVO:00000081]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________ridge [ENVO:00000283]': PermissibleValue(text='________ridge [ENVO:00000283]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____part of a landmass [ENVO:01001781]': PermissibleValue(text='____part of a landmass [ENVO:01001781]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______peninsula [ENVO:00000305]': PermissibleValue(text='______peninsula [ENVO:00000305]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____geological fracture [ENVO:01000667]': PermissibleValue(text='____geological fracture [ENVO:01000667]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______vein [ENVO:01000670]': PermissibleValue(text='______vein [ENVO:01000670]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______geological fault [ENVO:01000668]': PermissibleValue(text='______geological fault [ENVO:01000668]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________active geological fault [ENVO:01000669]': PermissibleValue(text='________active geological fault [ENVO:01000669]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______volcano [ENVO:00000247]': PermissibleValue(text='______volcano [ENVO:00000247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__field [ENVO:01000352]': PermissibleValue(text='__field [ENVO:01000352]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____lava field [ENVO:01000437]': PermissibleValue(text='____lava field [ENVO:01000437]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____gravel field [ENVO:00000548]': PermissibleValue(text='____gravel field [ENVO:00000548]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____woodland clearing [ENVO:00000444]': PermissibleValue(text='____woodland clearing [ENVO:00000444]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____agricultural field [ENVO:00000114]': PermissibleValue(text='____agricultural field [ENVO:00000114]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____snow field [ENVO:00000146]': PermissibleValue(text='____snow field [ENVO:00000146]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__geographic feature [ENVO:00000000]': PermissibleValue(text='__geographic feature [ENVO:00000000]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____hydrographic feature [ENVO:00000012]': PermissibleValue(text='____hydrographic feature [ENVO:00000012]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______reef [ENVO:01001899]': PermissibleValue(text='______reef [ENVO:01001899]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______inlet [ENVO:00000475]': PermissibleValue(text='______inlet [ENVO:00000475]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______bar [ENVO:00000167]': PermissibleValue(text='______bar [ENVO:00000167]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________tombolo [ENVO:00000420]': PermissibleValue(text='________tombolo [ENVO:00000420]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____anthropogenic geographic feature [ENVO:00000002]': PermissibleValue(text='____anthropogenic geographic feature [ENVO:00000002]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______yard [ENVO:03600053]': PermissibleValue(text='______yard [ENVO:03600053]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________residential backyard [ENVO:03600033]': PermissibleValue(text='________residential backyard [ENVO:03600033]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______market [ENVO:01000987]': PermissibleValue(text='______market [ENVO:01000987]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______park [ENVO:00000562]': PermissibleValue(text='______park [ENVO:00000562]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______well [ENVO:00000026]': PermissibleValue(text='______well [ENVO:00000026]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______garden [ENVO:00000011]': PermissibleValue(text='______garden [ENVO:00000011]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'OxyStatSampEnum': EnumDefinition(name='OxyStatSampEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OxyStatSampEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobic': PermissibleValue(text='aerobic', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobic': PermissibleValue(text='anaerobic', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_mat_enum': EnumDefinition(name='window_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'clad': PermissibleValue(text='clad', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'substructure_type_enum': EnumDefinition(name='substructure_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SubstructureTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crawlspace': PermissibleValue(text='crawlspace', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'slab on grade': PermissibleValue(text='slab on grade', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'basement': PermissibleValue(text='basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'filter_type_enum': EnumDefinition(name='filter_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FilterTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'particulate air filter': PermissibleValue(text='particulate air filter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chemical air filter': PermissibleValue(text='chemical air filter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low-MERV pleated media': PermissibleValue(text='low-MERV pleated media', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'HEPA': PermissibleValue(text='HEPA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'electrostatic': PermissibleValue(text='electrostatic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gas-phase or ultraviolet air treatments': PermissibleValue(text='gas-phase or ultraviolet air treatments', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'weekday_enum': EnumDefinition(name='weekday_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WeekdayEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Monday': PermissibleValue(text='Monday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tuesday': PermissibleValue(text='Tuesday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Wednesday': PermissibleValue(text='Wednesday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Thursday': PermissibleValue(text='Thursday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Friday': PermissibleValue(text='Friday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Saturday': PermissibleValue(text='Saturday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sunday': PermissibleValue(text='Sunday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_line_enum': EnumDefinition(name='train_line_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainLineEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'red': PermissibleValue(text='red', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'green': PermissibleValue(text='green', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange': PermissibleValue(text='orange', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_direct_enum': EnumDefinition(name='door_direct_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorDirectEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'inward': PermissibleValue(text='inward', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'outward': PermissibleValue(text='outward', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sideways': PermissibleValue(text='sideways', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'furniture_enum': EnumDefinition(name='furniture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FurnitureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cabinet': PermissibleValue(text='cabinet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chair': PermissibleValue(text='chair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'desks': PermissibleValue(text='desks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'occup_document_enum': EnumDefinition(name='occup_document_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OccupDocumentEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'automated count': PermissibleValue(text='automated count', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'estimate': PermissibleValue(text='estimate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'manual count': PermissibleValue(text='manual count', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'videos': PermissibleValue(text='videos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_horiz_pos_enum': EnumDefinition(name='window_horiz_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowHorizPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'left': PermissibleValue(text='left', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'middle': PermissibleValue(text='middle', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'right': PermissibleValue(text='right', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_cover_enum': EnumDefinition(name='window_cover_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowCoverEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'blinds': PermissibleValue(text='blinds', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'curtains': PermissibleValue(text='curtains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'shading_device_cond_enum': EnumDefinition(name='shading_device_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ShadingDeviceCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'int_wall_cond_enum': EnumDefinition(name='int_wall_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IntWallCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'light_type_enum': EnumDefinition(name='light_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/LightTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'natural light': PermissibleValue(text='natural light', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'electric light': PermissibleValue(text='electric light', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'desk lamp': PermissibleValue(text='desk lamp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flourescent lights': PermissibleValue(text='flourescent lights', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ext_window_orient_enum': EnumDefinition(name='ext_window_orient_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ExtWindowOrientEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast': PermissibleValue(text='northeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast': PermissibleValue(text='southeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest': PermissibleValue(text='southwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest': PermissibleValue(text='northwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'arch_struc_enum': EnumDefinition(name='arch_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ArchStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'building': PermissibleValue(text='building', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shed': PermissibleValue(text='shed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'home': PermissibleValue(text='home', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_struc_enum': EnumDefinition(name='floor_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'balcony': PermissibleValue(text='balcony', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'floating floor': PermissibleValue(text='floating floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glass floor': PermissibleValue(text='glass floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'raised floor': PermissibleValue(text='raised floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sprung floor': PermissibleValue(text='sprung floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood-framed': PermissibleValue(text='wood-framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'handidness_enum': EnumDefinition(name='handidness_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HandidnessEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'ambidexterity': PermissibleValue(text='ambidexterity', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'left handedness': PermissibleValue(text='left handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mixed-handedness': PermissibleValue(text='mixed-handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'right handedness': PermissibleValue(text='right handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_surf_treatment_enum': EnumDefinition(name='wall_surf_treatment_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallSurfTreatmentEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'painted': PermissibleValue(text='painted', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall paper': PermissibleValue(text='wall paper', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'no treatment': PermissibleValue(text='no treatment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paneling': PermissibleValue(text='paneling', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fabric': PermissibleValue(text='fabric', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'specific_enum': EnumDefinition(name='specific_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SpecificEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'operation': PermissibleValue(text='operation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'as built': PermissibleValue(text='as built', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'construction': PermissibleValue(text='construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bid': PermissibleValue(text='bid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'design': PermissibleValue(text='design', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'photos': PermissibleValue(text='photos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_loc_enum': EnumDefinition(name='window_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'building_setting_enum': EnumDefinition(name='building_setting_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildingSettingEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'urban': PermissibleValue(text='urban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'suburban': PermissibleValue(text='suburban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exurban': PermissibleValue(text='exurban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rural': PermissibleValue(text='rural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_floor_enum': EnumDefinition(name='samp_floor_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampFloorEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'1st floor': PermissibleValue(text='1st floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '2nd floor': PermissibleValue(text='2nd floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'basement': PermissibleValue(text='basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lobby': PermissibleValue(text='lobby', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'vis_media_enum': EnumDefinition(name='vis_media_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/VisMediaEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'photos': PermissibleValue(text='photos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'videos': PermissibleValue(text='videos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commonly of the building': PermissibleValue(text='commonly of the building', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'site context (adjacent buildings, vegetation, terrain, streets)': PermissibleValue(text='site context (adjacent buildings, vegetation, terrain, streets)', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'interiors': PermissibleValue(text='interiors', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'equipment': PermissibleValue(text='equipment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '3D scans': PermissibleValue(text='3D scans', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'indoor_space_enum': EnumDefinition(name='indoor_space_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IndoorSpaceEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bedroom': PermissibleValue(text='bedroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'foyer': PermissibleValue(text='foyer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'locker room': PermissibleValue(text='locker room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_texture_enum': EnumDefinition(name='ceil_texture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilTextureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crows feet': PermissibleValue(text='crows feet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crows-foot stomp': PermissibleValue(text='crows-foot stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'double skip': PermissibleValue(text='double skip', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hawk and trowel': PermissibleValue(text='hawk and trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'knockdown': PermissibleValue(text='knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'popcorn': PermissibleValue(text='popcorn', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange peel': PermissibleValue(text='orange peel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rosebud stomp': PermissibleValue(text='rosebud stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Santa-Fe texture': PermissibleValue(text='Santa-Fe texture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'skip trowel': PermissibleValue(text='skip trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'smooth': PermissibleValue(text='smooth', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stomp knockdown': PermissibleValue(text='stomp knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swirl': PermissibleValue(text='swirl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_move_enum': EnumDefinition(name='door_move_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorMoveEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'collapsible': PermissibleValue(text='collapsible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'folding': PermissibleValue(text='folding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'revolving': PermissibleValue(text='revolving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rolling shutter': PermissibleValue(text='rolling shutter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sliding': PermissibleValue(text='sliding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swinging': PermissibleValue(text='swinging', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_comp_type_enum': EnumDefinition(name='door_comp_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorCompTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metal covered': PermissibleValue(text='metal covered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'revolving': PermissibleValue(text='revolving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sliding': PermissibleValue(text='sliding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'telescopic': PermissibleValue(text='telescopic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_texture_enum': EnumDefinition(name='wall_texture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallTextureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crows feet': PermissibleValue(text='crows feet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crows-foot stomp': PermissibleValue(text='crows-foot stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '': PermissibleValue(text='', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'double skip': PermissibleValue(text='double skip', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hawk and trowel': PermissibleValue(text='hawk and trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'knockdown': PermissibleValue(text='knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'popcorn': PermissibleValue(text='popcorn', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange peel': PermissibleValue(text='orange peel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rosebud stomp': PermissibleValue(text='rosebud stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Santa-Fe texture': PermissibleValue(text='Santa-Fe texture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'skip trowel': PermissibleValue(text='skip trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'smooth': PermissibleValue(text='smooth', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stomp knockdown': PermissibleValue(text='stomp knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swirl': PermissibleValue(text='swirl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_loc_enum': EnumDefinition(name='wall_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_water_mold_enum': EnumDefinition(name='floor_water_mold_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorWaterMoldEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'mold odor': PermissibleValue(text='mold odor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wet floor': PermissibleValue(text='wet floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water stains': PermissibleValue(text='water stains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall discoloration': PermissibleValue(text='wall discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'floor discoloration': PermissibleValue(text='floor discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ceiling discoloration': PermissibleValue(text='ceiling discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'peeling paint or wallpaper': PermissibleValue(text='peeling paint or wallpaper', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bulging walls': PermissibleValue(text='bulging walls', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'condensation': PermissibleValue(text='condensation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_enum': EnumDefinition(name='door_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'composite': PermissibleValue(text='composite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wooden': PermissibleValue(text='wooden', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_cond_enum': EnumDefinition(name='window_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'water_feat_type_enum': EnumDefinition(name='water_feat_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WaterFeatTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'fountain': PermissibleValue(text='fountain', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pool': PermissibleValue(text='pool', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'standing feature': PermissibleValue(text='standing feature', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stream': PermissibleValue(text='stream', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'waterfall': PermissibleValue(text='waterfall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_cond_enum': EnumDefinition(name='floor_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'indoor_surf_enum': EnumDefinition(name='indoor_surf_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IndoorSurfEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cabinet': PermissibleValue(text='cabinet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ceiling': PermissibleValue(text='ceiling', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'counter top': PermissibleValue(text='counter top', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'door': PermissibleValue(text='door', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shelving': PermissibleValue(text='shelving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vent cover': PermissibleValue(text='vent cover', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'window': PermissibleValue(text='window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall': PermissibleValue(text='wall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ext_wall_orient_enum': EnumDefinition(name='ext_wall_orient_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ExtWallOrientEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast': PermissibleValue(text='northeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast': PermissibleValue(text='southeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest': PermissibleValue(text='southwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest': PermissibleValue(text='northwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'build_occup_type_enum': EnumDefinition(name='build_occup_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildOccupTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'market': PermissibleValue(text='market', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'restaurant': PermissibleValue(text='restaurant', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'residence': PermissibleValue(text='residence', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'school': PermissibleValue(text='school', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'residential': PermissibleValue(text='residential', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commercial': PermissibleValue(text='commercial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low rise': PermissibleValue(text='low rise', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high rise': PermissibleValue(text='high rise', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood framed': PermissibleValue(text='wood framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'health care': PermissibleValue(text='health care', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'airport': PermissibleValue(text='airport', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sports complex': PermissibleValue(text='sports complex', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_mat_enum': EnumDefinition(name='door_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aluminum': PermissibleValue(text='aluminum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cellular PVC': PermissibleValue(text='cellular PVC', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'engineered plastic': PermissibleValue(text='engineered plastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberboard': PermissibleValue(text='fiberboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'thermoplastic alloy': PermissibleValue(text='thermoplastic alloy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood/plastic composite': PermissibleValue(text='wood/plastic composite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_loc_enum': EnumDefinition(name='door_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'mech_struc_enum': EnumDefinition(name='mech_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/MechStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'subway': PermissibleValue(text='subway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'coach': PermissibleValue(text='coach', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carriage': PermissibleValue(text='carriage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'escalator': PermissibleValue(text='escalator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'boat': PermissibleValue(text='boat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'train': PermissibleValue(text='train', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'car': PermissibleValue(text='car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bus': PermissibleValue(text='bus', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'surf_air_cont_enum': EnumDefinition(name='surf_air_cont_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SurfAirContEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'dust': PermissibleValue(text='dust', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'organic matter': PermissibleValue(text='organic matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'particulate matter': PermissibleValue(text='particulate matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'volatile organic compounds': PermissibleValue(text='volatile organic compounds', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biological contaminants': PermissibleValue(text='biological contaminants', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'radon': PermissibleValue(text='radon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'nutrients': PermissibleValue(text='nutrients', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biocides': PermissibleValue(text='biocides', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'shading_device_type_enum': EnumDefinition(name='shading_device_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ShadingDeviceTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bahama shutters': PermissibleValue(text='bahama shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exterior roll blind': PermissibleValue(text='exterior roll blind', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gambrel awning': PermissibleValue(text='gambrel awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hood awning': PermissibleValue(text='hood awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'porchroller awning': PermissibleValue(text='porchroller awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sarasota shutters': PermissibleValue(text='sarasota shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'slatted aluminum': PermissibleValue(text='slatted aluminum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solid aluminum awning': PermissibleValue(text='solid aluminum awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sun screen': PermissibleValue(text='sun screen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tree': PermissibleValue(text='tree', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'trellis': PermissibleValue(text='trellis', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'venetian awning': PermissibleValue(text='venetian awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_loc_enum': EnumDefinition(name='room_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'corner room': PermissibleValue(text='corner room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'interior room': PermissibleValue(text='interior room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exterior wall': PermissibleValue(text='exterior wall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_condt_enum': EnumDefinition(name='room_condt_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomCondtEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible signs of mold/mildew': PermissibleValue(text='visible signs of mold/mildew', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'surf_material_enum': EnumDefinition(name='surf_material_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SurfMaterialEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'adobe': PermissibleValue(text='adobe', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carpet': PermissibleValue(text='carpet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cinder blocks': PermissibleValue(text='cinder blocks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hay bales': PermissibleValue(text='hay bales', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glass': PermissibleValue(text='glass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paint': PermissibleValue(text='paint', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plastic': PermissibleValue(text='plastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stainless steel': PermissibleValue(text='stainless steel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone': PermissibleValue(text='stone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_finish_mat_enum': EnumDefinition(name='ceil_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'drywall': PermissibleValue(text='drywall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mineral fibre': PermissibleValue(text='mineral fibre', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tiles': PermissibleValue(text='tiles', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PVC': PermissibleValue(text='PVC', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plasterboard': PermissibleValue(text='plasterboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mineral wool/calcium silicate': PermissibleValue(text='mineral wool/calcium silicate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_wood_enum': EnumDefinition(name='door_type_wood_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeWoodEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bettened and ledged': PermissibleValue(text='bettened and ledged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'battened': PermissibleValue(text='battened', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged and braced': PermissibleValue(text='ledged and braced', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged and framed': PermissibleValue(text='ledged and framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged, braced and frame': PermissibleValue(text='ledged, braced and frame', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'framed and paneled': PermissibleValue(text='framed and paneled', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glashed or sash': PermissibleValue(text='glashed or sash', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flush': PermissibleValue(text='flush', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'louvered': PermissibleValue(text='louvered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wire gauged': PermissibleValue(text='wire gauged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'heat_deliv_loc_enum': EnumDefinition(name='heat_deliv_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HeatDelivLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_stat_loc_enum': EnumDefinition(name='train_stat_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainStatLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'south station above ground': PermissibleValue(text='south station above ground', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south station underground': PermissibleValue(text='south station underground', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south station amtrak': PermissibleValue(text='south station amtrak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forest hills': PermissibleValue(text='forest hills', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'riverside': PermissibleValue(text='riverside', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_finish_mat_enum': EnumDefinition(name='floor_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood strip or parquet': PermissibleValue(text='wood strip or parquet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carpet': PermissibleValue(text='carpet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rug': PermissibleValue(text='rug', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laminate wood': PermissibleValue(text='laminate wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lineoleum': PermissibleValue(text='lineoleum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl composition tile': PermissibleValue(text='vinyl composition tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sheet vinyl': PermissibleValue(text='sheet vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone': PermissibleValue(text='stone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bamboo': PermissibleValue(text='bamboo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cork': PermissibleValue(text='cork', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrazo': PermissibleValue(text='terrazo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sealed': PermissibleValue(text='sealed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clear finish': PermissibleValue(text='clear finish', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paint': PermissibleValue(text='paint', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none or unfinished': PermissibleValue(text='none or unfinished', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_type_enum': EnumDefinition(name='window_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'single-hung sash window': PermissibleValue(text='single-hung sash window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'horizontal sash window': PermissibleValue(text='horizontal sash window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fixed window': PermissibleValue(text='fixed window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'drawings_enum': EnumDefinition(name='drawings_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DrawingsEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'operation': PermissibleValue(text='operation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'as built': PermissibleValue(text='as built', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'construction': PermissibleValue(text='construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bid': PermissibleValue(text='bid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'design': PermissibleValue(text='design', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'building navigation map': PermissibleValue(text='building navigation map', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'diagram': PermissibleValue(text='diagram', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sketch': PermissibleValue(text='sketch', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_const_type_enum': EnumDefinition(name='wall_const_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallConstTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'frame construction': PermissibleValue(text='frame construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'joisted masonry': PermissibleValue(text='joisted masonry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'light noncombustible': PermissibleValue(text='light noncombustible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'masonry noncombustible': PermissibleValue(text='masonry noncombustible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'modified fire resistive': PermissibleValue(text='modified fire resistive', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fire resistive': PermissibleValue(text='fire resistive', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_finish_mat_enum': EnumDefinition(name='wall_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'plaster': PermissibleValue(text='plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsum plaster': PermissibleValue(text='gypsum plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'veneer plaster': PermissibleValue(text='veneer plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsum board': PermissibleValue(text='gypsum board', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrazzo': PermissibleValue(text='terrazzo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone facing': PermissibleValue(text='stone facing', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'acoustical treatment': PermissibleValue(text='acoustical treatment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'masonry': PermissibleValue(text='masonry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'heat_cool_type_enum': EnumDefinition(name='heat_cool_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HeatCoolTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'radiant system': PermissibleValue(text='radiant system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'heat pump': PermissibleValue(text='heat pump', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forced air system': PermissibleValue(text='forced air system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'steam forced heat': PermissibleValue(text='steam forced heat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood stove': PermissibleValue(text='wood stove', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_vert_pos_enum': EnumDefinition(name='window_vert_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowVertPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bottom': PermissibleValue(text='bottom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'middle': PermissibleValue(text='middle', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'top': PermissibleValue(text='top', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low': PermissibleValue(text='low', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high': PermissibleValue(text='high', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_cond_enum': EnumDefinition(name='ceil_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_cond_enum': EnumDefinition(name='door_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'rel_samp_loc_enum': EnumDefinition(name='rel_samp_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RelSampLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'edge of car': PermissibleValue(text='edge of car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'center of car': PermissibleValue(text='center of car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'under a seat': PermissibleValue(text='under a seat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_connected_enum': EnumDefinition(name='room_connected_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomConnectedEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'attic': PermissibleValue(text='attic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'closet': PermissibleValue(text='closet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conference room': PermissibleValue(text='conference room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'examining room': PermissibleValue(text='examining room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mail room': PermissibleValue(text='mail room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stairwell': PermissibleValue(text='stairwell', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_stop_loc_enum': EnumDefinition(name='train_stop_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainStopLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'end': PermissibleValue(text='end', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mid': PermissibleValue(text='mid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'downtown': PermissibleValue(text='downtown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'quad_pos_enum': EnumDefinition(name='quad_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/QuadPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'North side': PermissibleValue(text='North side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'West side': PermissibleValue(text='West side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'South side': PermissibleValue(text='South side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'East side': PermissibleValue(text='East side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_type_enum': EnumDefinition(name='ceil_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cathedral': PermissibleValue(text='cathedral', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'dropped': PermissibleValue(text='dropped', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concave': PermissibleValue(text='concave', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'barrel-shaped': PermissibleValue(text='barrel-shaped', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'coffered': PermissibleValue(text='coffered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cove': PermissibleValue(text='cove', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stretched': PermissibleValue(text='stretched', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'build_docs_enum': EnumDefinition(name='build_docs_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildDocsEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'building information model': PermissibleValue(text='building information model', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commissioning report': PermissibleValue(text='commissioning report', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'complaint logs': PermissibleValue(text='complaint logs', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'contract administration': PermissibleValue(text='contract administration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cost estimate': PermissibleValue(text='cost estimate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'janitorial schedules or logs': PermissibleValue(text='janitorial schedules or logs', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'maintenance plans': PermissibleValue(text='maintenance plans', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'schedule': PermissibleValue(text='schedule', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sections': PermissibleValue(text='sections', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shop drawings': PermissibleValue(text='shop drawings', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'submittals': PermissibleValue(text='submittals', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ventilation system': PermissibleValue(text='ventilation system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'windows': PermissibleValue(text='windows', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_type_enum': EnumDefinition(name='room_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'attic': PermissibleValue(text='attic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'closet': PermissibleValue(text='closet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conference room': PermissibleValue(text='conference room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'examining room': PermissibleValue(text='examining room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mail room': PermissibleValue(text='mail room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'private office': PermissibleValue(text='private office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'open office': PermissibleValue(text='open office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stairwell': PermissibleValue(text='stairwell', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), ',restroom': PermissibleValue(text=',restroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lobby': PermissibleValue(text='lobby', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vestibule': PermissibleValue(text='vestibule', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mechanical or electrical room': PermissibleValue(text='mechanical or electrical room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'data center': PermissibleValue(text='data center', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laboratory_wet': PermissibleValue(text='laboratory_wet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laboratory_dry': PermissibleValue(text='laboratory_dry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gymnasium': PermissibleValue(text='gymnasium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natatorium': PermissibleValue(text='natatorium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'auditorium': PermissibleValue(text='auditorium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lockers': PermissibleValue(text='lockers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cafe': PermissibleValue(text='cafe', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'warehouse': PermissibleValue(text='warehouse', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'season_use_enum': EnumDefinition(name='season_use_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SeasonUseEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Spring': PermissibleValue(text='Spring', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Summer': PermissibleValue(text='Summer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fall': PermissibleValue(text='Fall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Winter': PermissibleValue(text='Winter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_metal_enum': EnumDefinition(name='door_type_metal_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeMetalEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'collapsible': PermissibleValue(text='collapsible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'corrugated steel': PermissibleValue(text='corrugated steel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hollow': PermissibleValue(text='hollow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rolling shutters': PermissibleValue(text='rolling shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'steel plate': PermissibleValue(text='steel plate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_samp_pos_enum': EnumDefinition(name='room_samp_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomSampPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north corner': PermissibleValue(text='north corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south corner': PermissibleValue(text='south corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west corner': PermissibleValue(text='west corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east corner': PermissibleValue(text='east corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast corner': PermissibleValue(text='northeast corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest corner': PermissibleValue(text='northwest corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast corner': PermissibleValue(text='southeast corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest corner': PermissibleValue(text='southwest corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'center': PermissibleValue(text='center', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_weather_enum': EnumDefinition(name='samp_weather_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampWeatherEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'clear sky': PermissibleValue(text='clear sky', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cloudy': PermissibleValue(text='cloudy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'foggy': PermissibleValue(text='foggy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hail': PermissibleValue(text='hail', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rain': PermissibleValue(text='rain', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'snow': PermissibleValue(text='snow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sleet': PermissibleValue(text='sleet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sunny': PermissibleValue(text='sunny', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'windy': PermissibleValue(text='windy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'gender_restroom_enum': EnumDefinition(name='gender_restroom_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GenderRestroomEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'all gender': PermissibleValue(text='all gender', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'female': PermissibleValue(text='female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gender neurtral': PermissibleValue(text='gender neurtral', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male': PermissibleValue(text='male', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male and female': PermissibleValue(text='male and female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'unisex': PermissibleValue(text='unisex', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hc_produced_enum': EnumDefinition(name='hc_produced_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcProducedEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Oil': PermissibleValue(text='Oil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas-Condensate': PermissibleValue(text='Gas-Condensate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas': PermissibleValue(text='Gas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bitumen': PermissibleValue(text='Bitumen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coalbed Methane': PermissibleValue(text='Coalbed Methane', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hcr_enum': EnumDefinition(name='hcr_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Oil Reservoir': PermissibleValue(text='Oil Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas Reservoir': PermissibleValue(text='Gas Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Oil Sand': PermissibleValue(text='Oil Sand', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coalbed': PermissibleValue(text='Coalbed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shale': PermissibleValue(text='Shale', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tight Oil Reservoir': PermissibleValue(text='Tight Oil Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tight Gas Reservoir': PermissibleValue(text='Tight Gas Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'lithology_enum': EnumDefinition(name='lithology_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/LithologyEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Basement': PermissibleValue(text='Basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chalk': PermissibleValue(text='Chalk', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chert': PermissibleValue(text='Chert', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coal': PermissibleValue(text='Coal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Conglomerate': PermissibleValue(text='Conglomerate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Diatomite': PermissibleValue(text='Diatomite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dolomite': PermissibleValue(text='Dolomite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Limestone': PermissibleValue(text='Limestone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sandstone': PermissibleValue(text='Sandstone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shale': PermissibleValue(text='Shale', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Siltstone': PermissibleValue(text='Siltstone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Volcanic': PermissibleValue(text='Volcanic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_collect_point_enum': EnumDefinition(name='samp_collect_point_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampCollectPointEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'well': PermissibleValue(text='well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'test well': PermissibleValue(text='test well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'drilling rig': PermissibleValue(text='drilling rig', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wellhead': PermissibleValue(text='wellhead', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'separator': PermissibleValue(text='separator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'storage tank': PermissibleValue(text='storage tank', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'oxy_stat_samp_enum': EnumDefinition(name='oxy_stat_samp_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OxyStatSampEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobic': PermissibleValue(text='aerobic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobic': PermissibleValue(text='anaerobic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'depos_env_enum': EnumDefinition(name='depos_env_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DeposEnvEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Continental - Alluvial': PermissibleValue(text='Continental - Alluvial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Aeolian': PermissibleValue(text='Continental - Aeolian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Fluvial': PermissibleValue(text='Continental - Fluvial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Lacustrine': PermissibleValue(text='Continental - Lacustrine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Deltaic': PermissibleValue(text='Transitional - Deltaic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Tidal': PermissibleValue(text='Transitional - Tidal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Lagoonal': PermissibleValue(text='Transitional - Lagoonal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Beach': PermissibleValue(text='Transitional - Beach', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Lake': PermissibleValue(text='Transitional - Lake', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Shallow': PermissibleValue(text='Marine - Shallow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Deep': PermissibleValue(text='Marine - Deep', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Reef': PermissibleValue(text='Marine - Reef', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Evaporite': PermissibleValue(text='Other - Evaporite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Glacial': PermissibleValue(text='Other - Glacial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Volcanic': PermissibleValue(text='Other - Volcanic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hcr_geol_age_enum': EnumDefinition(name='hcr_geol_age_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrGeolAgeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Archean': PermissibleValue(text='Archean', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambrian': PermissibleValue(text='Cambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carboniferous': PermissibleValue(text='Carboniferous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cenozoic': PermissibleValue(text='Cenozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cretaceous': PermissibleValue(text='Cretaceous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Devonian': PermissibleValue(text='Devonian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Jurassic': PermissibleValue(text='Jurassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mesozoic': PermissibleValue(text='Mesozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Neogene': PermissibleValue(text='Neogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ordovician': PermissibleValue(text='Ordovician', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleogene': PermissibleValue(text='Paleogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleozoic': PermissibleValue(text='Paleozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permian': PermissibleValue(text='Permian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Precambrian': PermissibleValue(text='Precambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Proterozoic': PermissibleValue(text='Proterozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silurian': PermissibleValue(text='Silurian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Triassic': PermissibleValue(text='Triassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_subtype_enum': EnumDefinition(name='samp_subtype_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampSubtypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'oil phase': PermissibleValue(text='oil phase', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water phase': PermissibleValue(text='water phase', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biofilm': PermissibleValue(text='biofilm', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'not applicable': PermissibleValue(text='not applicable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_lithology_enum': EnumDefinition(name='sr_lithology_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrLithologyEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Clastic': PermissibleValue(text='Clastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carbonate': PermissibleValue(text='Carbonate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coal': PermissibleValue(text='Coal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Biosilicieous': PermissibleValue(text='Biosilicieous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_kerog_type_enum': EnumDefinition(name='sr_kerog_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrKerogTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Type I': PermissibleValue(text='Type I', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type II': PermissibleValue(text='Type II', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type III': PermissibleValue(text='Type III', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type IV': PermissibleValue(text='Type IV', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_dep_env_enum': EnumDefinition(name='sr_dep_env_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrDepEnvEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Lacustine': PermissibleValue(text='Lacustine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluvioldeltaic': PermissibleValue(text='Fluvioldeltaic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluviomarine': PermissibleValue(text='Fluviomarine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine': PermissibleValue(text='Marine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_geol_age_enum': EnumDefinition(name='sr_geol_age_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrGeolAgeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Archean': PermissibleValue(text='Archean', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambrian': PermissibleValue(text='Cambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carboniferous': PermissibleValue(text='Carboniferous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cenozoic': PermissibleValue(text='Cenozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cretaceous': PermissibleValue(text='Cretaceous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Devonian': PermissibleValue(text='Devonian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Jurassic': PermissibleValue(text='Jurassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mesozoic': PermissibleValue(text='Mesozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Neogene': PermissibleValue(text='Neogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ordovician': PermissibleValue(text='Ordovician', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleogene': PermissibleValue(text='Paleogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleozoic': PermissibleValue(text='Paleozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permian': PermissibleValue(text='Permian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Precambrian': PermissibleValue(text='Precambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Proterozoic': PermissibleValue(text='Proterozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silurian': PermissibleValue(text='Silurian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Triassic': PermissibleValue(text='Triassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'biotic_relationship_enum': EnumDefinition(name='biotic_relationship_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BioticRelationshipEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'free living': PermissibleValue(text='free living', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'parasite': PermissibleValue(text='parasite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commensal': PermissibleValue(text='commensal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'symbiont': PermissibleValue(text='symbiont', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'fao_class_enum': EnumDefinition(name='fao_class_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FaoClassEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Acrisols': PermissibleValue(text='Acrisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Andosols': PermissibleValue(text='Andosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Arenosols': PermissibleValue(text='Arenosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambisols': PermissibleValue(text='Cambisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chernozems': PermissibleValue(text='Chernozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ferralsols': PermissibleValue(text='Ferralsols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluvisols': PermissibleValue(text='Fluvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gleysols': PermissibleValue(text='Gleysols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Greyzems': PermissibleValue(text='Greyzems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gypsisols': PermissibleValue(text='Gypsisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Histosols': PermissibleValue(text='Histosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Kastanozems': PermissibleValue(text='Kastanozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Lithosols': PermissibleValue(text='Lithosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Luvisols': PermissibleValue(text='Luvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Nitosols': PermissibleValue(text='Nitosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Phaeozems': PermissibleValue(text='Phaeozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Planosols': PermissibleValue(text='Planosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Podzols': PermissibleValue(text='Podzols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Podzoluvisols': PermissibleValue(text='Podzoluvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Rankers': PermissibleValue(text='Rankers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Regosols': PermissibleValue(text='Regosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Rendzinas': PermissibleValue(text='Rendzinas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Solonchaks': PermissibleValue(text='Solonchaks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Solonetz': PermissibleValue(text='Solonetz', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Vertisols': PermissibleValue(text='Vertisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Yermosols': PermissibleValue(text='Yermosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'cur_land_use_enum': EnumDefinition(name='cur_land_use_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CurLandUseEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'badlands': PermissibleValue(text='badlands', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cities': PermissibleValue(text='cities', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conifers': PermissibleValue(text='conifers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='conifers (e.g. pine,spruce,fir,cypress)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='cypress', description=None, object=None), Example(value='fir', description=None, object=None), Example(value='pine', description=None, object=None), Example(value='spruce', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crop trees': PermissibleValue(text='crop trees', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='crop trees (nuts,fruit,christmas trees,nursery trees)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='christmas trees', description=None, object=None), Example(value='fruit', description=None, object=None), Example(value='nursery trees', description=None, object=None), Example(value='nuts', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farmstead': PermissibleValue(text='farmstead', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gravel': PermissibleValue(text='gravel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hardwoods': PermissibleValue(text='hardwoods', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='hardwoods (e.g. oak,hickory,elm,aspen)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aspen', description=None, object=None), Example(value='elm', description=None, object=None), Example(value='hickory', description=None, object=None), Example(value='oak', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hayland': PermissibleValue(text='hayland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'horticultural plants': PermissibleValue(text='horticultural plants', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='horticultural plants (e.g. tulips)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='tulips', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'industrial areas': PermissibleValue(text='industrial areas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'intermixed hardwood and conifers': PermissibleValue(text='intermixed hardwood and conifers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'marshlands': PermissibleValue(text='marshlands', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='marshlands (grass,sedges,rushes)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='grass', description=None, object=None), Example(value='rushes', description=None, object=None), Example(value='sedgees', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'meadows': PermissibleValue(text='meadows', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='meadows (grasses,alfalfa,fescue,bromegrass,timothy)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='alfalfa', description=None, object=None), Example(value='bromegrass', description=None, object=None), Example(value='fescue', description=None, object=None), Example(value='grasses', description=None, object=None), Example(value='timothy', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mines/quarries': PermissibleValue(text='mines/quarries', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mudflats': PermissibleValue(text='mudflats', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'oil waste areas': PermissibleValue(text='oil waste areas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pastureland': PermissibleValue(text='pastureland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='pastureland (grasslands used for livestock grazing)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['grasslands used for livestock grazing'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'permanent snow or ice': PermissibleValue(text='permanent snow or ice', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rainforest': PermissibleValue(text='rainforest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='rainforest (evergreen forest receiving greater than 406 cm annual rainfall)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['evergreen forest receiving greater than 406 cm annual rainfall'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rangeland': PermissibleValue(text='rangeland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'roads/railroads': PermissibleValue(text='roads/railroads', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rock': PermissibleValue(text='rock', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'row crops': PermissibleValue(text='row crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'saline seeps': PermissibleValue(text='saline seeps', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'salt flats': PermissibleValue(text='salt flats', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sand': PermissibleValue(text='sand', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shrub crops': PermissibleValue(text='shrub crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='shrub crops (blueberries,nursery ornamentals,filberts)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='blueberries', description=None, object=None), Example(value='filberts', description=None, object=None), Example(value='nursery ornamentals', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shrub land': PermissibleValue(text='shrub land', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='shrub land (e.g. mesquite,sage-brush,creosote bush,shrub oak,eucalyptus)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='creosote bush', description=None, object=None), Example(value='eucalyptus', description=None, object=None), Example(value='mesquite', description=None, object=None), Example(value='sage-brush', description=None, object=None), Example(value='shrub oak', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'small grains': PermissibleValue(text='small grains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'successional shrub land': PermissibleValue(text='successional shrub land', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='successional shrub land (tree saplings,hazels,sumacs,chokecherry,shrub dogwoods,blackberries)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='blackberries', description=None, object=None), Example(value='chokecherry', description=None, object=None), Example(value='hazels', description=None, object=None), Example(value='shrub dogwoods', description=None, object=None), Example(value='sumacs', description=None, object=None), Example(value='tree saplings', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swamp': PermissibleValue(text='swamp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='swamp (permanent or semi-permanent water body dominated by woody plants)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['permanent or semi-permanent water body dominated by woody plants'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical': PermissibleValue(text='tropical', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='tropical (e.g. mangrove,palms)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='mangrove', description=None, object=None), Example(value='palms', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tundra': PermissibleValue(text='tundra', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='tundra (mosses,lichens)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='lichens', description=None, object=None), Example(value='mosses', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vegetable crops': PermissibleValue(text='vegetable crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vine crops': PermissibleValue(text='vine crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='vine crops (grapes)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='grapes', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'soil_horizon_enum': EnumDefinition(name='soil_horizon_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilHorizonEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'O horizon': PermissibleValue(text='O horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'A horizon': PermissibleValue(text='A horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'E horizon': PermissibleValue(text='E horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'B horizon': PermissibleValue(text='B horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'C horizon': PermissibleValue(text='C horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'R layer': PermissibleValue(text='R layer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permafrost': PermissibleValue(text='Permafrost', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'M horizon': PermissibleValue(text='M horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'profile_position_enum': EnumDefinition(name='profile_position_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ProfilePositionEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'summit': PermissibleValue(text='summit', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shoulder': PermissibleValue(text='shoulder', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'backslope': PermissibleValue(text='backslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'footslope': PermissibleValue(text='footslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'toeslope': PermissibleValue(text='toeslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'tillage_enum': EnumDefinition(name='tillage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TillageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'drill': PermissibleValue(text='drill', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cutting disc': PermissibleValue(text='cutting disc', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ridge till': PermissibleValue(text='ridge till', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'strip tillage': PermissibleValue(text='strip tillage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'zonal tillage': PermissibleValue(text='zonal tillage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chisel': PermissibleValue(text='chisel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tined': PermissibleValue(text='tined', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mouldboard': PermissibleValue(text='mouldboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'disc plough': PermissibleValue(text='disc plough', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'drainage_class_enum': EnumDefinition(name='drainage_class_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DrainageClassEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'very poorly': PermissibleValue(text='very poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'poorly': PermissibleValue(text='poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'somewhat poorly': PermissibleValue(text='somewhat poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'moderately well': PermissibleValue(text='moderately well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'well': PermissibleValue(text='well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'excessively drained': PermissibleValue(text='excessively drained', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_capt_status_enum': EnumDefinition(name='samp_capt_status_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampCaptStatusEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'active surveillance in response to an outbreak': PermissibleValue(text='active surveillance in response to an outbreak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'active surveillance not initiated by an outbreak': PermissibleValue(text='active surveillance not initiated by an outbreak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farm sample': PermissibleValue(text='farm sample', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'market sample': PermissibleValue(text='market sample', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_dis_stage_enum': EnumDefinition(name='samp_dis_stage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampDisStageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'dissemination': PermissibleValue(text='dissemination', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'growth and reproduction': PermissibleValue(text='growth and reproduction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'infection': PermissibleValue(text='infection', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'inoculation': PermissibleValue(text='inoculation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'penetration': PermissibleValue(text='penetration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'biol_stat_enum': EnumDefinition(name='biol_stat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BiolStatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'wild': PermissibleValue(text='wild', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural': PermissibleValue(text='natural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'semi-natural': PermissibleValue(text='semi-natural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'inbred line': PermissibleValue(text='inbred line', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), \"breeder's line\": PermissibleValue(text=\"breeder's line\", description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hybrid': PermissibleValue(text='hybrid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clonal selection': PermissibleValue(text='clonal selection', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mutant': PermissibleValue(text='mutant', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'growth_habit_enum': EnumDefinition(name='growth_habit_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GrowthHabitEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'erect': PermissibleValue(text='erect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'semi-erect': PermissibleValue(text='semi-erect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'spreading': PermissibleValue(text='spreading', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'prostrate': PermissibleValue(text='prostrate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'plant_sex_enum': EnumDefinition(name='plant_sex_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/PlantSexEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Androdioecious': PermissibleValue(text='Androdioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androecious': PermissibleValue(text='Androecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androgynous': PermissibleValue(text='Androgynous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androgynomonoecious': PermissibleValue(text='Androgynomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Andromonoecious': PermissibleValue(text='Andromonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bisexual': PermissibleValue(text='Bisexual', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dichogamous': PermissibleValue(text='Dichogamous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Diclinous': PermissibleValue(text='Diclinous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dioecious': PermissibleValue(text='Dioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynodioecious': PermissibleValue(text='Gynodioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynoecious': PermissibleValue(text='Gynoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynomonoecious': PermissibleValue(text='Gynomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Hermaphroditic': PermissibleValue(text='Hermaphroditic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Imperfect': PermissibleValue(text='Imperfect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Monoclinous': PermissibleValue(text='Monoclinous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Monoecious': PermissibleValue(text='Monoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Perfect': PermissibleValue(text='Perfect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamodioecious': PermissibleValue(text='Polygamodioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamomonoecious': PermissibleValue(text='Polygamomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamous': PermissibleValue(text='Polygamous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Protandrous': PermissibleValue(text='Protandrous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Protogynous': PermissibleValue(text='Protogynous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subandroecious': PermissibleValue(text='Subandroecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subdioecious': PermissibleValue(text='Subdioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subgynoecious': PermissibleValue(text='Subgynoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Synoecious': PermissibleValue(text='Synoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Trimonoecious': PermissibleValue(text='Trimonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Trioecious': PermissibleValue(text='Trioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unisexual': PermissibleValue(text='Unisexual', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sediment_type_enum': EnumDefinition(name='sediment_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SedimentTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'biogenous': PermissibleValue(text='biogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cosmogenous': PermissibleValue(text='cosmogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hydrogenous': PermissibleValue(text='hydrogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lithogenous': PermissibleValue(text='lithogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'tidal_stage_enum': EnumDefinition(name='tidal_stage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TidalStageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'low tide': PermissibleValue(text='low tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ebb tide': PermissibleValue(text='ebb tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flood tide': PermissibleValue(text='flood tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high tide': PermissibleValue(text='high tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'host_sex_enum': EnumDefinition(name='host_sex_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HostSexEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'female': PermissibleValue(text='female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hermaphrodite': PermissibleValue(text='hermaphrodite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male': PermissibleValue(text='male', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'neuter': PermissibleValue(text='neuter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'analysis_type_enum': EnumDefinition(name='analysis_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AnalysisTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metabolomics': PermissibleValue(text='metabolomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metagenomics': PermissibleValue(text='metagenomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metaproteomics': PermissibleValue(text='metaproteomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metatranscriptomics': PermissibleValue(text='metatranscriptomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural organic matter': PermissibleValue(text='natural organic matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'dna_sample_format_enum': EnumDefinition(name='dna_sample_format_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-DNA': PermissibleValue(text='Gentegra-DNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-RNA': PermissibleValue(text='Gentegra-RNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'rna_sample_format_enum': EnumDefinition(name='rna_sample_format_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-DNA': PermissibleValue(text='Gentegra-DNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-RNA': PermissibleValue(text='Gentegra-RNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sample_type_enum': EnumDefinition(name='sample_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water_extract_soil': PermissibleValue(text='water_extract_soil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}" ; + linkml:classes "{'AirInterface': ClassDefinition(name='AirInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AirInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='air dh_interface', alt_descriptions={}, title='Air', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['air_PM_concen', 'alt', 'barometric_press', 'carb_dioxide', 'carb_monoxide', 'chem_administration', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'horizon_meth', 'humidity', 'lat_lon', 'methane', 'misc_param', 'organism_count', 'oxy_stat_samp', 'oxygen', 'perturbation', 'pollutants', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'AirInterface_sample_link', 'size_frac', 'solar_irradiance', 'specific_ecosystem', 'temp', 'ventilation_rate', 'ventilation_type', 'volatile_org_comp', 'wind_direction', 'wind_speed', 'AirInterface_air_PM_concen', 'AirInterface_alt', 'AirInterface_barometric_press', 'AirInterface_carb_dioxide', 'AirInterface_carb_monoxide', 'AirInterface_chem_administration', 'AirInterface_collection_date', 'AirInterface_depth', 'AirInterface_ecosystem', 'AirInterface_ecosystem_category', 'AirInterface_ecosystem_subtype', 'AirInterface_ecosystem_type', 'AirInterface_elev', 'AirInterface_env_broad_scale', 'AirInterface_env_local_scale', 'AirInterface_env_medium', 'AirInterface_env_package', 'AirInterface_experimental_factor', 'AirInterface_geo_loc_name', 'AirInterface_horizon_meth', 'AirInterface_humidity', 'AirInterface_lat_lon', 'AirInterface_methane', 'AirInterface_misc_param', 'AirInterface_organism_count', 'AirInterface_oxy_stat_samp', 'AirInterface_oxygen', 'AirInterface_perturbation', 'AirInterface_pollutants', 'AirInterface_salinity', 'AirInterface_samp_collec_device', 'AirInterface_samp_collec_method', 'AirInterface_samp_mat_process', 'AirInterface_samp_size', 'AirInterface_samp_store_dur', 'AirInterface_samp_store_loc', 'AirInterface_samp_store_temp', 'AirInterface_size_frac', 'AirInterface_solar_irradiance', 'AirInterface_specific_ecosystem', 'AirInterface_temp', 'AirInterface_ventilation_rate', 'AirInterface_ventilation_type', 'AirInterface_volatile_org_comp', 'AirInterface_wind_direction', 'AirInterface_wind_speed', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'air_PM_concen': SlotDefinition(name='air_PM_concen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particulate matter name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrograms per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description=\"Concentration of substances that remain suspended in the air, and comprise mixtures of organic and inorganic substances (PM10 and PM2.5); can report multiple PM's by entering numeric values preceded by name of PM\", alt_descriptions={}, title='air particulate matter concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='PM2.5;10 microgram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air particulate matter concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000108', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'barometric_press': SlotDefinition(name='barometric_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millibar', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Force per unit area exerted against a surface by the weight of air above that surface', alt_descriptions={}, title='barometric pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 millibar', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['barometric pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=49, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000096', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_dioxide': SlotDefinition(name='carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon dioxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='410 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_monoxide': SlotDefinition(name='carb_monoxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon monoxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon monoxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon monoxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000098', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity': SlotDefinition(name='humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Amount of water vapour in the air, at the time of sampling', alt_descriptions={}, title='humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000100', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxygen': SlotDefinition(name='oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Oxygen (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='600 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000104', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pollutants': SlotDefinition(name='pollutants', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pollutant name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter, microgram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Pollutant types and, amount or concentrations measured at the time of sampling; can report multiple pollutants by entering numeric values preceded by name of pollutant', alt_descriptions={}, title='pollutants', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='lead;0.15 microgram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pollutants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000107', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'solar_irradiance': SlotDefinition(name='solar_irradiance', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilowatts per square meter per day, ergs per square centimeter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The amount of solar energy that arrives at a specific area of a surface during a specific time interval', alt_descriptions={}, title='solar irradiance', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.36 kilowatts per square meter per day', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['solar irradiance'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=55, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000112', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_rate': SlotDefinition(name='ventilation_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per minute, liters per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation rate of the system in the sampled premises', alt_descriptions={}, title='ventilation rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='750 cubic meter per minute', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=56, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000114', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_type': SlotDefinition(name='ventilation_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ventilation type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation system used in the sampled premises', alt_descriptions={}, title='ventilation type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Operable windows', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=57, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000756', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'volatile_org_comp': SlotDefinition(name='volatile_org_comp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='volatile organic compound name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per cubic meter, parts per million, nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of carbon-based chemicals that easily evaporate at room temperature; can report multiple volatile organic compounds by entering numeric values preceded by name of compound', alt_descriptions={}, title='volatile organic compounds', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='formaldehyde;500 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile organic compounds'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=58, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000115', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wind_direction': SlotDefinition(name='wind_direction', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='wind direction name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Wind direction is the direction from which a wind originates', alt_descriptions={}, title='wind direction', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Northwest', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wind direction'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=59, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000757', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wind_speed': SlotDefinition(name='wind_speed', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second, kilometer per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Speed of wind measured at the time of sampling', alt_descriptions={}, title='wind speed', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='21 kilometer per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wind speed'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=60, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000118', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:AirInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'BiofilmInterface': ClassDefinition(name='BiofilmInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BiofilmInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='biofilm dh_interface', alt_descriptions={}, title='Biofilm', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkyl_diethers', 'alt', 'aminopept_act', 'ammonium', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'magnesium', 'mean_frict_vel', 'mean_peak_frict_vel', 'methane', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'potassium', 'pressure', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'BiofilmInterface_sample_link', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'tot_carb', 'tot_nitro_content', 'tot_org_carb', 'turbidity', 'water_content', 'BiofilmInterface_alkalinity', 'BiofilmInterface_alkyl_diethers', 'BiofilmInterface_alt', 'BiofilmInterface_aminopept_act', 'BiofilmInterface_ammonium', 'BiofilmInterface_bacteria_carb_prod', 'BiofilmInterface_biomass', 'BiofilmInterface_bishomohopanol', 'BiofilmInterface_bromide', 'BiofilmInterface_calcium', 'BiofilmInterface_carb_nitro_ratio', 'BiofilmInterface_chem_administration', 'BiofilmInterface_chloride', 'BiofilmInterface_chlorophyll', 'BiofilmInterface_collection_date', 'BiofilmInterface_depth', 'BiofilmInterface_diether_lipids', 'BiofilmInterface_diss_carb_dioxide', 'BiofilmInterface_diss_hydrogen', 'BiofilmInterface_diss_inorg_carb', 'BiofilmInterface_diss_org_carb', 'BiofilmInterface_diss_org_nitro', 'BiofilmInterface_diss_oxygen', 'BiofilmInterface_ecosystem', 'BiofilmInterface_ecosystem_category', 'BiofilmInterface_ecosystem_subtype', 'BiofilmInterface_ecosystem_type', 'BiofilmInterface_elev', 'BiofilmInterface_env_broad_scale', 'BiofilmInterface_env_local_scale', 'BiofilmInterface_env_medium', 'BiofilmInterface_env_package', 'BiofilmInterface_experimental_factor', 'BiofilmInterface_geo_loc_name', 'BiofilmInterface_glucosidase_act', 'BiofilmInterface_horizon_meth', 'BiofilmInterface_lat_lon', 'BiofilmInterface_magnesium', 'BiofilmInterface_mean_frict_vel', 'BiofilmInterface_mean_peak_frict_vel', 'BiofilmInterface_methane', 'BiofilmInterface_misc_param', 'BiofilmInterface_n_alkanes', 'BiofilmInterface_nitrate', 'BiofilmInterface_nitrite', 'BiofilmInterface_nitro', 'BiofilmInterface_org_carb', 'BiofilmInterface_org_matter', 'BiofilmInterface_org_nitro', 'BiofilmInterface_organism_count', 'BiofilmInterface_oxy_stat_samp', 'BiofilmInterface_part_org_carb', 'BiofilmInterface_perturbation', 'BiofilmInterface_petroleum_hydrocarb', 'BiofilmInterface_ph', 'BiofilmInterface_ph_meth', 'BiofilmInterface_phaeopigments', 'BiofilmInterface_phosphate', 'BiofilmInterface_phosplipid_fatt_acid', 'BiofilmInterface_potassium', 'BiofilmInterface_pressure', 'BiofilmInterface_redox_potential', 'BiofilmInterface_salinity', 'BiofilmInterface_samp_collec_device', 'BiofilmInterface_samp_collec_method', 'BiofilmInterface_samp_mat_process', 'BiofilmInterface_samp_size', 'BiofilmInterface_samp_store_dur', 'BiofilmInterface_samp_store_loc', 'BiofilmInterface_samp_store_temp', 'BiofilmInterface_silicate', 'BiofilmInterface_size_frac', 'BiofilmInterface_sodium', 'BiofilmInterface_specific_ecosystem', 'BiofilmInterface_sulfate', 'BiofilmInterface_sulfide', 'BiofilmInterface_temp', 'BiofilmInterface_tot_carb', 'BiofilmInterface_tot_nitro_content', 'BiofilmInterface_tot_org_carb', 'BiofilmInterface_turbidity', 'BiofilmInterface_water_content', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:BiofilmInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'BuiltEnvInterface': ClassDefinition(name='BuiltEnvInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuiltEnvInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='built_env dh_interface', alt_descriptions={}, title='Built Env', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['abs_air_humidity', 'address', 'adj_room', 'aero_struc', 'air_temp', 'alt', 'amount_light', 'arch_struc', 'avg_dew_point', 'avg_occup', 'avg_temp', 'bathroom_count', 'bedroom_count', 'build_docs', 'build_occup_type', 'building_setting', 'built_struc_age', 'built_struc_set', 'built_struc_type', 'carb_dioxide', 'ceil_area', 'ceil_cond', 'ceil_finish_mat', 'ceil_struc', 'ceil_texture', 'ceil_thermal_mass', 'ceil_type', 'ceil_water_mold', 'collection_date', 'cool_syst_id', 'date_last_rain', 'depth', 'dew_point', 'door_comp_type', 'door_cond', 'door_direct', 'door_loc', 'door_mat', 'door_move', 'door_size', 'door_type', 'door_type_metal', 'door_type_wood', 'door_water_mold', 'drawings', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'elevator', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'escalator', 'exp_duct', 'exp_pipe', 'experimental_factor', 'ext_door', 'ext_wall_orient', 'ext_window_orient', 'filter_type', 'fireplace_type', 'floor_age', 'floor_area', 'floor_cond', 'floor_count', 'floor_finish_mat', 'floor_struc', 'floor_thermal_mass', 'floor_water_mold', 'freq_clean', 'freq_cook', 'furniture', 'gender_restroom', 'geo_loc_name', 'hall_count', 'handidness', 'heat_cool_type', 'heat_deliv_loc', 'heat_sys_deliv_meth', 'heat_system_id', 'height_carper_fiber', 'horizon_meth', 'indoor_space', 'indoor_surf', 'inside_lux', 'int_wall_cond', 'last_clean', 'lat_lon', 'light_type', 'max_occup', 'mech_struc', 'number_pets', 'number_plants', 'number_resident', 'occup_density_samp', 'occup_document', 'occup_samp', 'organism_count', 'pres_animal_insect', 'quad_pos', 'rel_air_humidity', 'rel_humidity_out', 'rel_samp_loc', 'room_air_exch_rate', 'room_architec_elem', 'room_condt', 'room_connected', 'room_count', 'room_dim', 'room_door_dist', 'room_door_share', 'room_hallway', 'room_loc', 'room_moist_dam_hist', 'room_net_area', 'room_occup', 'room_samp_pos', 'room_type', 'room_vol', 'room_wall_share', 'room_window_count', 'samp_floor', 'samp_room_id', 'samp_sort_meth', 'samp_time_out', 'samp_weather', 'BuiltEnvInterface_sample_link', 'season', 'season_use', 'shad_dev_water_mold', 'shading_device_cond', 'shading_device_loc', 'shading_device_mat', 'shading_device_type', 'size_frac', 'space_typ_state', 'specific', 'specific_ecosystem', 'specific_humidity', 'substructure_type', 'surf_air_cont', 'surf_humidity', 'surf_material', 'surf_moisture', 'surf_moisture_ph', 'surf_temp', 'temp', 'temp_out', 'train_line', 'train_stat_loc', 'train_stop_loc', 'typ_occup_density', 'ventilation_type', 'vis_media', 'wall_area', 'wall_const_type', 'wall_finish_mat', 'wall_height', 'wall_loc', 'wall_surf_treatment', 'wall_texture', 'wall_thermal_mass', 'wall_water_mold', 'water_feat_size', 'water_feat_type', 'weekday', 'window_cond', 'window_cover', 'window_horiz_pos', 'window_loc', 'window_mat', 'window_open_freq', 'window_size', 'window_status', 'window_type', 'window_vert_pos', 'window_water_mold', 'BuiltEnvInterface_abs_air_humidity', 'BuiltEnvInterface_address', 'BuiltEnvInterface_adj_room', 'BuiltEnvInterface_aero_struc', 'BuiltEnvInterface_air_temp', 'BuiltEnvInterface_alt', 'BuiltEnvInterface_amount_light', 'BuiltEnvInterface_arch_struc', 'BuiltEnvInterface_avg_dew_point', 'BuiltEnvInterface_avg_occup', 'BuiltEnvInterface_avg_temp', 'BuiltEnvInterface_bathroom_count', 'BuiltEnvInterface_bedroom_count', 'BuiltEnvInterface_build_docs', 'BuiltEnvInterface_build_occup_type', 'BuiltEnvInterface_building_setting', 'BuiltEnvInterface_built_struc_age', 'BuiltEnvInterface_built_struc_set', 'BuiltEnvInterface_built_struc_type', 'BuiltEnvInterface_carb_dioxide', 'BuiltEnvInterface_ceil_area', 'BuiltEnvInterface_ceil_cond', 'BuiltEnvInterface_ceil_finish_mat', 'BuiltEnvInterface_ceil_struc', 'BuiltEnvInterface_ceil_texture', 'BuiltEnvInterface_ceil_thermal_mass', 'BuiltEnvInterface_ceil_type', 'BuiltEnvInterface_ceil_water_mold', 'BuiltEnvInterface_collection_date', 'BuiltEnvInterface_cool_syst_id', 'BuiltEnvInterface_date_last_rain', 'BuiltEnvInterface_depth', 'BuiltEnvInterface_dew_point', 'BuiltEnvInterface_door_comp_type', 'BuiltEnvInterface_door_cond', 'BuiltEnvInterface_door_direct', 'BuiltEnvInterface_door_loc', 'BuiltEnvInterface_door_mat', 'BuiltEnvInterface_door_move', 'BuiltEnvInterface_door_size', 'BuiltEnvInterface_door_type', 'BuiltEnvInterface_door_type_metal', 'BuiltEnvInterface_door_type_wood', 'BuiltEnvInterface_door_water_mold', 'BuiltEnvInterface_drawings', 'BuiltEnvInterface_ecosystem', 'BuiltEnvInterface_ecosystem_category', 'BuiltEnvInterface_ecosystem_subtype', 'BuiltEnvInterface_ecosystem_type', 'BuiltEnvInterface_elev', 'BuiltEnvInterface_elevator', 'BuiltEnvInterface_env_broad_scale', 'BuiltEnvInterface_env_local_scale', 'BuiltEnvInterface_env_medium', 'BuiltEnvInterface_env_package', 'BuiltEnvInterface_escalator', 'BuiltEnvInterface_exp_duct', 'BuiltEnvInterface_exp_pipe', 'BuiltEnvInterface_experimental_factor', 'BuiltEnvInterface_ext_door', 'BuiltEnvInterface_ext_wall_orient', 'BuiltEnvInterface_ext_window_orient', 'BuiltEnvInterface_filter_type', 'BuiltEnvInterface_fireplace_type', 'BuiltEnvInterface_floor_age', 'BuiltEnvInterface_floor_area', 'BuiltEnvInterface_floor_cond', 'BuiltEnvInterface_floor_count', 'BuiltEnvInterface_floor_finish_mat', 'BuiltEnvInterface_floor_struc', 'BuiltEnvInterface_floor_thermal_mass', 'BuiltEnvInterface_floor_water_mold', 'BuiltEnvInterface_freq_clean', 'BuiltEnvInterface_freq_cook', 'BuiltEnvInterface_furniture', 'BuiltEnvInterface_gender_restroom', 'BuiltEnvInterface_geo_loc_name', 'BuiltEnvInterface_hall_count', 'BuiltEnvInterface_handidness', 'BuiltEnvInterface_heat_cool_type', 'BuiltEnvInterface_heat_deliv_loc', 'BuiltEnvInterface_heat_sys_deliv_meth', 'BuiltEnvInterface_heat_system_id', 'BuiltEnvInterface_height_carper_fiber', 'BuiltEnvInterface_horizon_meth', 'BuiltEnvInterface_indoor_space', 'BuiltEnvInterface_indoor_surf', 'BuiltEnvInterface_inside_lux', 'BuiltEnvInterface_int_wall_cond', 'BuiltEnvInterface_last_clean', 'BuiltEnvInterface_lat_lon', 'BuiltEnvInterface_light_type', 'BuiltEnvInterface_max_occup', 'BuiltEnvInterface_mech_struc', 'BuiltEnvInterface_number_pets', 'BuiltEnvInterface_number_plants', 'BuiltEnvInterface_number_resident', 'BuiltEnvInterface_occup_density_samp', 'BuiltEnvInterface_occup_document', 'BuiltEnvInterface_occup_samp', 'BuiltEnvInterface_organism_count', 'BuiltEnvInterface_pres_animal_insect', 'BuiltEnvInterface_quad_pos', 'BuiltEnvInterface_rel_air_humidity', 'BuiltEnvInterface_rel_humidity_out', 'BuiltEnvInterface_rel_samp_loc', 'BuiltEnvInterface_room_air_exch_rate', 'BuiltEnvInterface_room_architec_elem', 'BuiltEnvInterface_room_condt', 'BuiltEnvInterface_room_connected', 'BuiltEnvInterface_room_count', 'BuiltEnvInterface_room_dim', 'BuiltEnvInterface_room_door_dist', 'BuiltEnvInterface_room_door_share', 'BuiltEnvInterface_room_hallway', 'BuiltEnvInterface_room_loc', 'BuiltEnvInterface_room_moist_dam_hist', 'BuiltEnvInterface_room_net_area', 'BuiltEnvInterface_room_occup', 'BuiltEnvInterface_room_samp_pos', 'BuiltEnvInterface_room_type', 'BuiltEnvInterface_room_vol', 'BuiltEnvInterface_room_wall_share', 'BuiltEnvInterface_room_window_count', 'BuiltEnvInterface_samp_floor', 'BuiltEnvInterface_samp_room_id', 'BuiltEnvInterface_samp_sort_meth', 'BuiltEnvInterface_samp_time_out', 'BuiltEnvInterface_samp_weather', 'BuiltEnvInterface_season', 'BuiltEnvInterface_season_use', 'BuiltEnvInterface_shad_dev_water_mold', 'BuiltEnvInterface_shading_device_cond', 'BuiltEnvInterface_shading_device_loc', 'BuiltEnvInterface_shading_device_mat', 'BuiltEnvInterface_shading_device_type', 'BuiltEnvInterface_size_frac', 'BuiltEnvInterface_space_typ_state', 'BuiltEnvInterface_specific', 'BuiltEnvInterface_specific_ecosystem', 'BuiltEnvInterface_specific_humidity', 'BuiltEnvInterface_substructure_type', 'BuiltEnvInterface_surf_air_cont', 'BuiltEnvInterface_surf_humidity', 'BuiltEnvInterface_surf_material', 'BuiltEnvInterface_surf_moisture', 'BuiltEnvInterface_surf_moisture_ph', 'BuiltEnvInterface_surf_temp', 'BuiltEnvInterface_temp', 'BuiltEnvInterface_temp_out', 'BuiltEnvInterface_train_line', 'BuiltEnvInterface_train_stat_loc', 'BuiltEnvInterface_train_stop_loc', 'BuiltEnvInterface_typ_occup_density', 'BuiltEnvInterface_ventilation_type', 'BuiltEnvInterface_vis_media', 'BuiltEnvInterface_wall_area', 'BuiltEnvInterface_wall_const_type', 'BuiltEnvInterface_wall_finish_mat', 'BuiltEnvInterface_wall_height', 'BuiltEnvInterface_wall_loc', 'BuiltEnvInterface_wall_surf_treatment', 'BuiltEnvInterface_wall_texture', 'BuiltEnvInterface_wall_thermal_mass', 'BuiltEnvInterface_wall_water_mold', 'BuiltEnvInterface_water_feat_size', 'BuiltEnvInterface_water_feat_type', 'BuiltEnvInterface_weekday', 'BuiltEnvInterface_window_cond', 'BuiltEnvInterface_window_cover', 'BuiltEnvInterface_window_horiz_pos', 'BuiltEnvInterface_window_loc', 'BuiltEnvInterface_window_mat', 'BuiltEnvInterface_window_open_freq', 'BuiltEnvInterface_window_size', 'BuiltEnvInterface_window_status', 'BuiltEnvInterface_window_type', 'BuiltEnvInterface_window_vert_pos', 'BuiltEnvInterface_window_water_mold', 'BuiltEnvInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'abs_air_humidity': SlotDefinition(name='abs_air_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram, kilogram per kilogram, kilogram, pound', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Actual mass of water vapor - mh20 - present in the air water vapor mixture', alt_descriptions={}, title='absolute air humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='9 gram per gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['absolute air humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=61, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000122', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'address': SlotDefinition(name='address', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The street name and building number where the sampling occurred.', alt_descriptions={}, title='address', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['address'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=62, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}{text}', singular_name=None, domain=None, slot_uri='MIXS:0000218', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'adj_room': SlotDefinition(name='adj_room', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of rooms (room number, room name) immediately adjacent to the sampling room', alt_descriptions={}, title='adjacent rooms', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['adjacent rooms'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=63, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000219', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aero_struc': SlotDefinition(name='aero_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Aerospace structures typically consist of thin plates with stiffeners for the external surfaces, bulkheads and frames to support the shape and fasteners such as welds, rivets, screws and bolts to hold the components together', alt_descriptions={}, title='aerospace structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plane', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aerospace structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=64, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[plane|glider]', singular_name=None, domain=None, slot_uri='MIXS:0000773', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'air_temp': SlotDefinition(name='air_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature of the air at the time of sampling', alt_descriptions={}, title='air temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=65, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000124', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'amount_light': SlotDefinition(name='amount_light', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux, lumens per square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The unit of illuminance and luminous emittance, measuring luminous flux per unit area', alt_descriptions={}, title='amount of light', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount of light'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=66, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000140', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'arch_struc': SlotDefinition(name='arch_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='An architectural structure is a human-made, free-standing, immobile outdoor construction', alt_descriptions={}, title='architectural structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='shed', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['architectural structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=67, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000774', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='arch_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_dew_point': SlotDefinition(name='avg_dew_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average of dew point measures taken at the beginning of every hour over a 24 hour period on the sampling day', alt_descriptions={}, title='average dew point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average dew point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=68, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000141', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_occup': SlotDefinition(name='avg_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Daily average occupancy of room. Indicate the number of person(s) daily occupying the sampling room.', alt_descriptions={}, title='average daily occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average daily occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=69, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000775', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'avg_temp': SlotDefinition(name='avg_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average of temperatures taken at the beginning of every hour over a 24 hour period on the sampling day', alt_descriptions={}, title='average temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['average temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=70, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000142', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bathroom_count': SlotDefinition(name='bathroom_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of bathrooms in the building', alt_descriptions={}, title='bathroom count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bathroom count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=71, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000776', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bedroom_count': SlotDefinition(name='bedroom_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of bedrooms in the building', alt_descriptions={}, title='bedroom count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bedroom count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=72, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000777', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'build_docs': SlotDefinition(name='build_docs', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building design, construction and operation documents', alt_descriptions={}, title='design, construction, and operation documents', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='maintenance plans', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['design, construction, and operation documents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=73, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000787', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='build_docs_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'build_occup_type': SlotDefinition(name='build_occup_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The primary function for which a building or discrete part of a building is intended to be used', alt_descriptions={}, title='building occupancy type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='market', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['building occupancy type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=74, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000761', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='build_occup_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'building_setting': SlotDefinition(name='building_setting', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A location (geography) where a building is set', alt_descriptions={}, title='building setting', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rural', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['building setting'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=75, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000768', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='building_setting_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_age': SlotDefinition(name='built_struc_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The age of the built structure since construction', alt_descriptions={}, title='built structure age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=76, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000145', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_set': SlotDefinition(name='built_struc_set', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The characterization of the location of the built structure as high or low human density', alt_descriptions={}, title='built structure setting', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rural', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure setting'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=77, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[urban|rural]', singular_name=None, domain=None, slot_uri='MIXS:0000778', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'built_struc_type': SlotDefinition(name='built_struc_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A physical structure that is a body or assemblage of bodies in space to form a system capable of supporting loads', alt_descriptions={}, title='built structure type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['built structure type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=78, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000721', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_dioxide': SlotDefinition(name='carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Carbon dioxide (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='410 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_area': SlotDefinition(name='ceil_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The area of the ceiling space within the room', alt_descriptions={}, title='ceiling area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 square meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=79, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000148', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_cond': SlotDefinition(name='ceil_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the ceiling at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='ceiling condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='damaged', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=80, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000779', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_finish_mat': SlotDefinition(name='ceil_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material used to finish a ceiling', alt_descriptions={}, title='ceiling finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='stucco', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=81, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000780', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_struc': SlotDefinition(name='ceil_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The construction format of the ceiling', alt_descriptions={}, title='ceiling structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='concrete', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=82, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[wood frame|concrete]', singular_name=None, domain=None, slot_uri='MIXS:0000782', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_texture': SlotDefinition(name='ceil_texture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The feel, appearance, or consistency of a ceiling surface', alt_descriptions={}, title='ceiling texture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='popcorn', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling texture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=83, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000783', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_texture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_thermal_mass': SlotDefinition(name='ceil_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the ceiling to provide inertia against temperature fluctuations. Generally this means concrete that is exposed. A metal deck that supports a concrete slab will act thermally as long as it is exposed to room air flow', alt_descriptions={}, title='ceiling thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=84, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000143', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_type': SlotDefinition(name='ceil_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The type of ceiling according to the ceiling's appearance or construction\", alt_descriptions={}, title='ceiling type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='coffered', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=85, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000784', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ceil_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ceil_water_mold': SlotDefinition(name='ceil_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the ceiling', alt_descriptions={}, title='ceiling signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ceiling signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=86, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000781', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cool_syst_id': SlotDefinition(name='cool_syst_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The cooling system identifier', alt_descriptions={}, title='cooling system identifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12345', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['cooling system identifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=87, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000785', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_last_rain': SlotDefinition(name='date_last_rain', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The date of the last time it rained', alt_descriptions={}, title='date last rain', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11:T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['date last rain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=88, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000786', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dew_point': SlotDefinition(name='dew_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The temperature to which a given parcel of humid air must be cooled, at constant barometric pressure, for water vapor to condense into water.', alt_descriptions={}, title='dew point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='22 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dew point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=89, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000129', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_comp_type': SlotDefinition(name='door_comp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The composite type of the door', alt_descriptions={}, title='door type, composite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='revolving', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, composite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=90, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000795', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_comp_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_cond': SlotDefinition(name='door_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The phsical condition of the door', alt_descriptions={}, title='door condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=91, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000788', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_direct': SlotDefinition(name='door_direct', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The direction the door opens', alt_descriptions={}, title='door direction of opening', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='inward', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door direction of opening'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=92, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000789', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_direct_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_loc': SlotDefinition(name='door_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the door in the room', alt_descriptions={}, title='door location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=93, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000790', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_mat': SlotDefinition(name='door_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material the door is composed of', alt_descriptions={}, title='door material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=94, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000791', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_move': SlotDefinition(name='door_move', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of movement of the door', alt_descriptions={}, title='door movement', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swinging', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door movement'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=95, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000792', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_move_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_size': SlotDefinition(name='door_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The size of the door', alt_descriptions={}, title='door area or size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 square meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door area or size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=96, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000158', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type': SlotDefinition(name='door_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of door material', alt_descriptions={}, title='door type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wooden', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=97, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000794', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type_metal': SlotDefinition(name='door_type_metal', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of metal door', alt_descriptions={}, title='door type, metal', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='hollow', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, metal'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=98, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000796', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_metal_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_type_wood': SlotDefinition(name='door_type_wood', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of wood door', alt_descriptions={}, title='door type, wood', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='battened', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door type, wood'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=99, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000797', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='door_type_wood_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'door_water_mold': SlotDefinition(name='door_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on a door', alt_descriptions={}, title='door signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['door signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=100, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000793', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'drawings': SlotDefinition(name='drawings', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The buildings architectural drawings; if design is chosen, indicate phase-conceptual, schematic, design development, and construction documents', alt_descriptions={}, title='drawings', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sketch', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['drawings'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000798', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='drawings_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elevator': SlotDefinition(name='elevator', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of elevators within the built structure', alt_descriptions={}, title='elevator count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['elevator count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=102, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000799', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'escalator': SlotDefinition(name='escalator', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of escalators within the built structure', alt_descriptions={}, title='escalator count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['escalator count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000800', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exp_duct': SlotDefinition(name='exp_duct', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The amount of exposed ductwork in the room', alt_descriptions={}, title='exposed ductwork', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exposed ductwork'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=104, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000144', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exp_pipe': SlotDefinition(name='exp_pipe', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of exposed pipes in the room', alt_descriptions={}, title='exposed pipes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exposed pipes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000220', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_door': SlotDefinition(name='ext_door', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of exterior doors in the built structure', alt_descriptions={}, title='exterior door count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['exterior door count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=106, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000170', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_wall_orient': SlotDefinition(name='ext_wall_orient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The orientation of the exterior wall', alt_descriptions={}, title='orientations of exterior wall', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='northwest', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['orientations of exterior wall'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000817', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ext_wall_orient_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ext_window_orient': SlotDefinition(name='ext_window_orient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The compass direction the exterior window of the room is facing', alt_descriptions={}, title='orientations of exterior window', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='southwest', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['orientations of exterior window'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=108, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000818', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='ext_window_orient_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_type': SlotDefinition(name='filter_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='A device which removes solid particulates or airborne molecular contaminants', alt_descriptions={}, title='filter type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='HEPA', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['filter type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=109, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000765', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='filter_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fireplace_type': SlotDefinition(name='fireplace_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A firebox with chimney', alt_descriptions={}, title='fireplace type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood burning', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fireplace type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=110, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[gas burning|wood burning]', singular_name=None, domain=None, slot_uri='MIXS:0000802', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_age': SlotDefinition(name='floor_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='years, weeks, days', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The time period since installment of the carpet or flooring', alt_descriptions={}, title='floor age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000164', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_area': SlotDefinition(name='floor_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The area of the floor space within the room', alt_descriptions={}, title='floor area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=112, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000165', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_cond': SlotDefinition(name='floor_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the floor at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='floor condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000803', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_count': SlotDefinition(name='floor_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of floors in the building, including basements and mechanical penthouse', alt_descriptions={}, title='floor count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=114, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_finish_mat': SlotDefinition(name='floor_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The floor covering type; the finished surface that is walked on', alt_descriptions={}, title='floor finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='carpet', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000804', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_struc': SlotDefinition(name='floor_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the structural elements and subfloor upon which the finish flooring is installed', alt_descriptions={}, title='floor structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='concrete', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=116, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000806', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_thermal_mass': SlotDefinition(name='floor_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the floor to provide inertia against temperature fluctuations', alt_descriptions={}, title='floor thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=117, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000166', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'floor_water_mold': SlotDefinition(name='floor_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew in a room', alt_descriptions={}, title='floor signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ceiling discoloration', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['floor signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=118, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000805', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='floor_water_mold_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'freq_clean': SlotDefinition(name='freq_clean', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration or {text}', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times the sample location is cleaned. Frequency of cleaning might be on a Daily basis, Weekly, Monthly, Quarterly or Annually.', alt_descriptions={}, title='frequency of cleaning', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['frequency of cleaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=119, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000226', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'freq_cook': SlotDefinition(name='freq_cook', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times a meal is cooked per week', alt_descriptions={}, title='frequency of cooking', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['frequency of cooking'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=120, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000227', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'furniture': SlotDefinition(name='furniture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The types of furniture present in the sampled room', alt_descriptions={}, title='furniture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='chair', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['furniture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=121, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000807', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='furniture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gender_restroom': SlotDefinition(name='gender_restroom', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The gender type of the restroom', alt_descriptions={}, title='gender of restroom', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='male', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gender of restroom'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=122, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000808', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='gender_restroom_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hall_count': SlotDefinition(name='hall_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total count of hallways and cooridors in the built structure', alt_descriptions={}, title='hallway/corridor count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hallway/corridor count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=123, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000228', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'handidness': SlotDefinition(name='handidness', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The handidness of the individual sampled', alt_descriptions={}, title='handidness', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='right handedness', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['handidness'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=124, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000809', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='handidness_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_cool_type': SlotDefinition(name='heat_cool_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Methods of conditioning or heating a room or building', alt_descriptions={}, title='heating and cooling system type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='heat pump', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating and cooling system type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=125, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000766', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='heat_cool_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_deliv_loc': SlotDefinition(name='heat_deliv_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The location of heat delivery within the room', alt_descriptions={}, title='heating delivery locations', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating delivery locations'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=126, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000810', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='heat_deliv_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_sys_deliv_meth': SlotDefinition(name='heat_sys_deliv_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The method by which the heat is delivered through the system', alt_descriptions={}, title='heating system delivery method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='radiant', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating system delivery method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=127, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[conductive|radiant]', singular_name=None, domain=None, slot_uri='MIXS:0000812', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heat_system_id': SlotDefinition(name='heat_system_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The heating system identifier', alt_descriptions={}, title='heating system identifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['heating system identifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=128, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000833', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'height_carper_fiber': SlotDefinition(name='height_carper_fiber', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average carpet fiber height in the indoor environment', alt_descriptions={}, title='height carpet fiber mat', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['height carpet fiber mat'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=129, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000167', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indoor_space': SlotDefinition(name='indoor_space', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A distinguishable space within a structure, the purpose for which discrete areas of a building is used', alt_descriptions={}, title='indoor space', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='foyer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['indoor space'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=130, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000763', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='indoor_space_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indoor_surf': SlotDefinition(name='indoor_surf', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of indoor surface', alt_descriptions={}, title='indoor surface', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wall', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['indoor surface'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=131, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000764', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='indoor_surf_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inside_lux': SlotDefinition(name='inside_lux', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilowatt per square metre', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded value at sampling time (power density)', alt_descriptions={}, title='inside lux light', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inside lux light'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=132, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000168', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'int_wall_cond': SlotDefinition(name='int_wall_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the wall at the time of sampling; photos or video preferred; use drawings to indicate location of damaged areas', alt_descriptions={}, title='interior wall condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='damaged', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['interior wall condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=133, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000813', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='int_wall_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_clean': SlotDefinition(name='last_clean', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The last time the floor was cleaned (swept, mopped, vacuumed)', alt_descriptions={}, title='last time swept/mopped/vacuumed', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11:T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['last time swept/mopped/vacuumed'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=134, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000814', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_type': SlotDefinition(name='light_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Application of light to achieve some practical or aesthetic effect. Lighting includes the use of both artificial light sources such as lamps and light fixtures, as well as natural illumination by capturing daylight. Can also include absence of light', alt_descriptions={}, title='light type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='desk lamp', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=135, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000769', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='light_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'max_occup': SlotDefinition(name='max_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The maximum amount of people allowed in the indoor environment', alt_descriptions={}, title='maximum occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['maximum occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=136, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000229', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mech_struc': SlotDefinition(name='mech_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='mechanical structure: a moving structure', alt_descriptions={}, title='mechanical structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elevator', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mechanical structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=137, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000815', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='mech_struc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_pets': SlotDefinition(name='number_pets', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of pets residing in the sampled space', alt_descriptions={}, title='number of pets', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of pets'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=138, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000231', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_plants': SlotDefinition(name='number_plants', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of plant(s) in the sampling space', alt_descriptions={}, title='number of houseplants', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of houseplants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=139, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000230', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'number_resident': SlotDefinition(name='number_resident', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of individuals currently occupying in the sampling location', alt_descriptions={}, title='number of residents', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['number of residents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=140, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000232', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_density_samp': SlotDefinition(name='occup_density_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Average number of occupants at time of sampling per square footage', alt_descriptions={}, title='occupant density at sampling', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupant density at sampling'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=141, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000217', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_document': SlotDefinition(name='occup_document', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of documentation of occupancy', alt_descriptions={}, title='occupancy documentation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='estimate', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupancy documentation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=142, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000816', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='occup_document_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'occup_samp': SlotDefinition(name='occup_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Number of occupants present at time of sample within the given space', alt_descriptions={}, title='occupancy at sampling', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['occupancy at sampling'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=143, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000772', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pres_animal_insect': SlotDefinition(name='pres_animal_insect', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration;count', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type and number of animals or insects present in the sampling space.', alt_descriptions={}, title='presence of pets, animals, or insects', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='cat;5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['presence of pets, animals, or insects'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=144, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000819', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(cat|dog|rodent|snake|other);\\\\d+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'quad_pos': SlotDefinition(name='quad_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The quadrant position of the sampling room within the building', alt_descriptions={}, title='quadrant position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='West side', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['quadrant position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=145, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000820', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='quad_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_air_humidity': SlotDefinition(name='rel_air_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Partial vapor and air pressure, density of the vapor and air, or by the actual mass of the vapor and air', alt_descriptions={}, title='relative air humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='80%', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['relative air humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=146, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000121', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_humidity_out': SlotDefinition(name='rel_humidity_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram of air, kilogram of air', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded outside relative humidity value at the time of sampling', alt_descriptions={}, title='outside relative humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12 per kilogram of air', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['outside relative humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=147, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000188', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rel_samp_loc': SlotDefinition(name='rel_samp_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The sampling location within the train car', alt_descriptions={}, title='relative sampling location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='center of car', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['relative sampling location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=148, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000821', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='rel_samp_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_air_exch_rate': SlotDefinition(name='room_air_exch_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The rate at which outside air replaces indoor air in a given space', alt_descriptions={}, title='room air exchange rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room air exchange rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=149, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000169', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_architec_elem': SlotDefinition(name='room_architec_elem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The unique details and component parts that, together, form the architecture of a distinguisahable space within a built structure', alt_descriptions={}, title='room architectural elements', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room architectural elements'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=150, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000233', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_condt': SlotDefinition(name='room_condt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The condition of the room at the time of sampling', alt_descriptions={}, title='room condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=151, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000822', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_condt_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_connected': SlotDefinition(name='room_connected', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of rooms connected to the sampling room by a doorway', alt_descriptions={}, title='rooms connected by a doorway', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='office', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms connected by a doorway'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=152, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000826', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_connected_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_count': SlotDefinition(name='room_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total count of rooms in the built structure including all room types', alt_descriptions={}, title='room count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=153, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000234', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_dim': SlotDefinition(name='room_dim', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length, width and height of sampling room', alt_descriptions={}, title='room dimensions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room dimensions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=154, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit} x {integer} {unit} x {integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000192', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_door_dist': SlotDefinition(name='room_door_dist', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Distance between doors (meters) in the hallway between the sampling room and adjacent rooms', alt_descriptions={}, title='room door distance', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room door distance'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=155, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000193', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_door_share': SlotDefinition(name='room_door_share', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) sharing a door with the sampling room', alt_descriptions={}, title='rooms that share a door with sampling room', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that share a door with sampling room'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=156, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000242', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_hallway': SlotDefinition(name='room_hallway', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) located in the same hallway as sampling room', alt_descriptions={}, title='rooms that are on the same hallway', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that are on the same hallway'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=157, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000238', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_loc': SlotDefinition(name='room_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The position of the room within the building', alt_descriptions={}, title='room location in building', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='interior room', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room location in building'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=158, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000823', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_moist_dam_hist': SlotDefinition(name='room_moist_dam_hist', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The history of moisture damage or mold in the past 12 months. Number of events of moisture damage or mold observed', alt_descriptions={}, title='room moisture damage or mold history', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room moisture damage or mold history'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=159, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000235', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_net_area': SlotDefinition(name='room_net_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square feet, square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The net floor area of sampling room. Net area excludes wall thicknesses', alt_descriptions={}, title='room net area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room net area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=160, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000194', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_occup': SlotDefinition(name='room_occup', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Count of room occupancy at time of sampling', alt_descriptions={}, title='room occupancy', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room occupancy'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=161, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000236', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_samp_pos': SlotDefinition(name='room_samp_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The horizontal sampling position in the room relative to architectural elements', alt_descriptions={}, title='room sampling position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='south corner', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room sampling position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=162, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000824', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_samp_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_type': SlotDefinition(name='room_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The main purpose or activity of the sampling room. A room is any distinguishable space within a structure', alt_descriptions={}, title='room type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bathroom', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=163, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000825', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='room_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_vol': SlotDefinition(name='room_vol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic feet, cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Volume of sampling room', alt_descriptions={}, title='room volume', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room volume'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=164, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000195', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_wall_share': SlotDefinition(name='room_wall_share', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='room name;room number', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of room(s) (room number, room name) sharing a wall with the sampling room', alt_descriptions={}, title='rooms that share a wall with sampling room', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooms that share a wall with sampling room'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=165, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{integer}', singular_name=None, domain=None, slot_uri='MIXS:0000243', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'room_window_count': SlotDefinition(name='room_window_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Number of windows in the room', alt_descriptions={}, title='room window count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['room window count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=166, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000237', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_floor': SlotDefinition(name='samp_floor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The floor of the building, where the sampling room is located', alt_descriptions={}, title='sampling floor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4th floor', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling floor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=167, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000828', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_floor_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_room_id': SlotDefinition(name='samp_room_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sampling room number. This ID should be consistent with the designations on the building floor plans', alt_descriptions={}, title='sampling room ID or name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling room ID or name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=168, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000244', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_sort_meth': SlotDefinition(name='samp_sort_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Method by which samples are sorted; open face filter collecting total suspended particles, prefilter to remove particles larger than X micrometers in diameter, where common values of X would be 10 and 2.5 full size sorting in a cascade impactor.', alt_descriptions={}, title='sample size sorting method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample size sorting method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=169, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000216', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_time_out': SlotDefinition(name='samp_time_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='time', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recent and long term history of outside sampling', alt_descriptions={}, title='sampling time outside', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling time outside'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=170, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000196', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_weather': SlotDefinition(name='samp_weather', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The weather on the sampling day', alt_descriptions={}, title='sampling day weather', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='foggy', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sampling day weather'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=171, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000827', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_weather_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season': SlotDefinition(name='season', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCIT:C94729', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The season when sampling occurred. Any of the four periods into which the year is divided by the equinoxes and solstices. This field accepts terms listed under season (http://purl.obolibrary.org/obo/NCIT_C94729).', alt_descriptions={}, title='season', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='autumn [NCIT:C94733]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['season'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=172, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000829', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_use': SlotDefinition(name='season_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The seasons the space is occupied', alt_descriptions={}, title='seasonal use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Winter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['seasonal use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=173, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000830', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='season_use_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shad_dev_water_mold': SlotDefinition(name='shad_dev_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the shading device', alt_descriptions={}, title='shading device signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=174, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000834', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_cond': SlotDefinition(name='shading_device_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the shading device at the time of sampling', alt_descriptions={}, title='shading device condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='new', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=175, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000831', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='shading_device_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_loc': SlotDefinition(name='shading_device_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The location of the shading device in relation to the built structure', alt_descriptions={}, title='shading device location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='exterior', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=176, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[exterior|interior]', singular_name=None, domain=None, slot_uri='MIXS:0000832', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_mat': SlotDefinition(name='shading_device_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='material name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material the shading device is composed of', alt_descriptions={}, title='shading device material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=177, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000245', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shading_device_type': SlotDefinition(name='shading_device_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of shading device', alt_descriptions={}, title='shading device type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='slatted aluminum awning', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['shading device type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=178, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000835', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='shading_device_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'space_typ_state': SlotDefinition(name='space_typ_state', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Customary or normal state of the space', alt_descriptions={}, title='space typical state', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='typically occupied', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['space typical state'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=179, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[typically occupied|typically unoccupied]', singular_name=None, domain=None, slot_uri='MIXS:0000770', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific': SlotDefinition(name='specific', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building specifications. If design is chosen, indicate phase: conceptual, schematic, design development, construction documents', alt_descriptions={}, title='specifications', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='construction', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['specifications'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=180, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000836', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='specific_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_humidity': SlotDefinition(name='specific_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram of air, kilogram of air', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The mass of water vapour in a unit mass of moist air, usually expressed as grams of vapour per kilogram of air, or, in air conditioning, as grains per pound.', alt_descriptions={}, title='specific humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 per kilogram of air', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['specific humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=181, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000214', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'substructure_type': SlotDefinition(name='substructure_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The substructure or under building is that largely hidden section of the building which is built off the foundations to the ground floor level', alt_descriptions={}, title='substructure type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='basement', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['substructure type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=182, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000767', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='substructure_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_air_cont': SlotDefinition(name='surf_air_cont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Contaminant identified on surface', alt_descriptions={}, title='surface-air contaminant', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='radon', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface-air contaminant'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=183, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000759', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='surf_air_cont_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_humidity': SlotDefinition(name='surf_humidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Surfaces: water activity as a function of air and material moisture', alt_descriptions={}, title='surface humidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10%', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface humidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=184, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000123', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_material': SlotDefinition(name='surf_material', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Surface materials at the point of sampling', alt_descriptions={}, title='surface material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=185, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000758', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='surf_material_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_moisture': SlotDefinition(name='surf_moisture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million, gram per cubic meter, gram per square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Water held on a surface', alt_descriptions={}, title='surface moisture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.01 gram per square meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface moisture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=186, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000128', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_moisture_ph': SlotDefinition(name='surf_moisture_ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='ph measurement of surface', alt_descriptions={}, title='surface moisture pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface moisture pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=187, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000760', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'surf_temp': SlotDefinition(name='surf_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature of the surface at the time of sampling', alt_descriptions={}, title='surface temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['surface temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=188, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000125', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp_out': SlotDefinition(name='temp_out', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The recorded temperature value at sampling time outside', alt_descriptions={}, title='temperature outside house', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature outside house'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=189, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000197', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_line': SlotDefinition(name='train_line', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The subway line name', alt_descriptions={}, title='train line', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='red', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train line'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=190, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000837', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_line_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_stat_loc': SlotDefinition(name='train_stat_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The train station collection location', alt_descriptions={}, title='train station collection location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='forest hills', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train station collection location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=191, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000838', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_stat_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'train_stop_loc': SlotDefinition(name='train_stop_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The train stop collection location', alt_descriptions={}, title='train stop collection location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='end', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['train stop collection location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=192, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000839', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='train_stop_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typ_occup_density': SlotDefinition(name='typ_occup_density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Customary or normal density of occupants', alt_descriptions={}, title='typical occupant density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['typical occupant density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=193, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000771', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ventilation_type': SlotDefinition(name='ventilation_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ventilation type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ventilation system used in the sampled premises', alt_descriptions={}, title='ventilation type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Operable windows', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ventilation type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=57, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000756', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vis_media': SlotDefinition(name='vis_media', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building visual media', alt_descriptions={}, title='visual media', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='3D scans', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['visual media'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=194, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000840', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='vis_media_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_area': SlotDefinition(name='wall_area', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The total area of the sampled room's walls\", alt_descriptions={}, title='wall area', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall area'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=195, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000198', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_const_type': SlotDefinition(name='wall_const_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The building class of the wall defined by the composition of the building elements and fire-resistance rating.', alt_descriptions={}, title='wall construction type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='fire resistive', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall construction type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=196, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000841', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_const_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_finish_mat': SlotDefinition(name='wall_finish_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The material utilized to finish the outer most layer of the wall', alt_descriptions={}, title='wall finish material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall finish material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=197, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000842', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_finish_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_height': SlotDefinition(name='wall_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The average height of the walls in the sampled room', alt_descriptions={}, title='wall height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=198, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000221', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_loc': SlotDefinition(name='wall_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the wall within the room', alt_descriptions={}, title='wall location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='north', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=199, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000843', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_surf_treatment': SlotDefinition(name='wall_surf_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The surface treatment of interior wall', alt_descriptions={}, title='wall surface treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='paneling', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall surface treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=200, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000845', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_surf_treatment_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_texture': SlotDefinition(name='wall_texture', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The feel, appearance, or consistency of a wall surface', alt_descriptions={}, title='wall texture', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='popcorn', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall texture'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=201, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000846', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='wall_texture_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_thermal_mass': SlotDefinition(name='wall_thermal_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='joule per degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The ability of the wall to provide inertia against temperature fluctuations. Generally this means concrete or concrete block that is either exposed or covered only with paint', alt_descriptions={}, title='wall thermal mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall thermal mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=202, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000222', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wall_water_mold': SlotDefinition(name='wall_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on a wall', alt_descriptions={}, title='wall signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wall signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=203, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000844', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_feat_size': SlotDefinition(name='water_feat_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='square meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The size of the water feature', alt_descriptions={}, title='water feature size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water feature size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=204, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000223', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_feat_type': SlotDefinition(name='water_feat_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of water feature present within the building being sampled', alt_descriptions={}, title='water feature type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='stream', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water feature type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=205, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000847', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='water_feat_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'weekday': SlotDefinition(name='weekday', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The day of the week when sampling occurred', alt_descriptions={}, title='weekday', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Sunday', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['weekday'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=206, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000848', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='weekday_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_cond': SlotDefinition(name='window_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The physical condition of the window at the time of sampling', alt_descriptions={}, title='window condition', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rupture', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window condition'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=207, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000849', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_cond_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_cover': SlotDefinition(name='window_cover', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of window covering', alt_descriptions={}, title='window covering', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='curtains', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window covering'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=208, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000850', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_cover_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_horiz_pos': SlotDefinition(name='window_horiz_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The horizontal position of the window on the wall', alt_descriptions={}, title='window horizontal position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='middle', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window horizontal position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=209, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000851', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_horiz_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_loc': SlotDefinition(name='window_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative location of the window within the room', alt_descriptions={}, title='window location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='west', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=210, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000852', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_loc_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_mat': SlotDefinition(name='window_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material used to finish a window', alt_descriptions={}, title='window material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wood', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=211, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000853', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_mat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_open_freq': SlotDefinition(name='window_open_freq', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The number of times windows are opened per week', alt_descriptions={}, title='window open frequency', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window open frequency'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=212, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000246', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_size': SlotDefinition(name='window_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='inch, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"The window's length and width\", alt_descriptions={}, title='window area/size', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window area/size'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=213, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit} x {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000224', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_status': SlotDefinition(name='window_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Defines whether the windows were open or closed during environmental testing', alt_descriptions={}, title='window status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='open', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=214, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[closed|open]', singular_name=None, domain=None, slot_uri='MIXS:0000855', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_type': SlotDefinition(name='window_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of windows', alt_descriptions={}, title='window type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='fixed window', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=215, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000856', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_vert_pos': SlotDefinition(name='window_vert_pos', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The vertical position of the window on the wall', alt_descriptions={}, title='window vertical position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='middle', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window vertical position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=216, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000857', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='window_vert_pos_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'window_water_mold': SlotDefinition(name='window_water_mold', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Signs of the presence of mold or mildew on the window.', alt_descriptions={}, title='window signs of water/mold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='no presence of mold visible', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['window signs of water/mold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=217, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='[presence of mold visible|no presence of mold visible]', singular_name=None, domain=None, slot_uri='MIXS:0000854', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:BuiltEnvInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'EmslInterface': ClassDefinition(name='EmslInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EmslInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='emsl dh_interface', alt_descriptions={}, title='Emsl', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['EmslInterface_emsl_store_temp', 'EmslInterface_project_id', 'EmslInterface_replicate_number', 'EmslInterface_sample_shipped', 'EmslInterface_sample_type', 'EmslInterface_technical_reps', 'emsl_store_temp', 'project_id', 'replicate_number', 'sample_shipped', 'sample_type', 'technical_reps', 'EmslInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'emsl_store_temp': SlotDefinition(name='emsl_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The temperature at which the sample should be stored upon delivery to EMSL', alt_descriptions={}, title='EMSL sample storage temperature, deg. C', deprecated=None, todos=[\"add 'see_alsos' with link to NEXUS info\"], notes=[], comments=['Enter a temperature in celsius. Numeric portion only.'], examples=[Example(value='-80', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'project_id': SlotDefinition(name='project_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Proposal IDs or names associated with dataset', alt_descriptions={}, title='project ID', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'replicate_number': SlotDefinition(name='replicate_number', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='If sending biological replicates, indicate the rep number here.', alt_descriptions={}, title='replicate number', deprecated=None, todos=[], notes=[], comments=['This will guide staff in ensuring your samples are blocked & randomized correctly'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_shipped': SlotDefinition(name='sample_shipped', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample sent to EMSL.', alt_descriptions={}, title='sample shipped amount', deprecated=None, todos=[], notes=[], comments=['This field is only required when completing metadata for samples being submitted to EMSL for analyses.'], examples=[Example(value='15 g', description=None, object=None), Example(value='100 uL', description=None, object=None), Example(value='5 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_type': SlotDefinition(name='sample_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of sample being submitted', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[\"This can vary from 'environmental package' if the sample is an extraction.\"], examples=[Example(value='water extracted soil', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sample_type_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'technical_reps': SlotDefinition(name='technical_reps', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='If sending technical replicates of the same sample, indicate the replicate count.', alt_descriptions={}, title='number technical replicate', deprecated=None, todos=[], notes=[], comments=['This field is only required when completing metadata for samples being submitted to EMSL for analyses.'], examples=[Example(value='2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='emsl_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='integer', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:EmslInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HcrCoresInterface': ClassDefinition(name='HcrCoresInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrCoresInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='hcr_cores dh_interface', alt_descriptions={}, title='Hcr Cores', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['additional_info', 'alkalinity', 'alkalinity_method', 'ammonium', 'api', 'aromatics_pc', 'asphaltenes_pc', 'basin', 'benzene', 'calcium', 'chem_administration', 'chloride', 'collection_date', 'density', 'depos_env', 'depth', 'diss_carb_dioxide', 'diss_inorg_carb', 'diss_inorg_phosp', 'diss_iron', 'diss_org_carb', 'diss_oxygen_fluid', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'ethylbenzene', 'experimental_factor', 'field', 'geo_loc_name', 'hc_produced', 'hcr', 'hcr_fw_salinity', 'hcr_geol_age', 'hcr_pressure', 'hcr_temp', 'horizon_meth', 'lat_lon', 'lithology', 'magnesium', 'misc_param', 'nitrate', 'nitrite', 'org_count_qpcr_info', 'organism_count', 'owc_tvdss', 'oxy_stat_samp', 'permeability', 'ph', 'ph_meth', 'porosity', 'potassium', 'pour_point', 'pressure', 'reservoir', 'resins_pc', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_md', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'samp_subtype', 'samp_transport_cond', 'samp_tvdss', 'samp_type', 'samp_well_name', 'HcrCoresInterface_sample_link', 'saturates_pc', 'size_frac', 'sodium', 'specific_ecosystem', 'sr_dep_env', 'sr_geol_age', 'sr_kerog_type', 'sr_lithology', 'sulfate', 'sulfate_fw', 'sulfide', 'suspend_solids', 'tan', 'temp', 'toluene', 'tot_iron', 'tot_nitro', 'tot_phosp', 'tot_sulfur', 'tvdss_of_hcr_press', 'tvdss_of_hcr_temp', 'vfa', 'vfa_fw', 'viscosity', 'win', 'xylene', 'HcrCoresInterface_additional_info', 'HcrCoresInterface_alkalinity', 'HcrCoresInterface_alkalinity_method', 'HcrCoresInterface_ammonium', 'HcrCoresInterface_api', 'HcrCoresInterface_aromatics_pc', 'HcrCoresInterface_asphaltenes_pc', 'HcrCoresInterface_basin', 'HcrCoresInterface_benzene', 'HcrCoresInterface_calcium', 'HcrCoresInterface_chem_administration', 'HcrCoresInterface_chloride', 'HcrCoresInterface_collection_date', 'HcrCoresInterface_density', 'HcrCoresInterface_depos_env', 'HcrCoresInterface_depth', 'HcrCoresInterface_diss_carb_dioxide', 'HcrCoresInterface_diss_inorg_carb', 'HcrCoresInterface_diss_inorg_phosp', 'HcrCoresInterface_diss_iron', 'HcrCoresInterface_diss_org_carb', 'HcrCoresInterface_diss_oxygen_fluid', 'HcrCoresInterface_ecosystem', 'HcrCoresInterface_ecosystem_category', 'HcrCoresInterface_ecosystem_subtype', 'HcrCoresInterface_ecosystem_type', 'HcrCoresInterface_elev', 'HcrCoresInterface_env_broad_scale', 'HcrCoresInterface_env_local_scale', 'HcrCoresInterface_env_medium', 'HcrCoresInterface_env_package', 'HcrCoresInterface_ethylbenzene', 'HcrCoresInterface_experimental_factor', 'HcrCoresInterface_field', 'HcrCoresInterface_geo_loc_name', 'HcrCoresInterface_hc_produced', 'HcrCoresInterface_hcr', 'HcrCoresInterface_hcr_fw_salinity', 'HcrCoresInterface_hcr_geol_age', 'HcrCoresInterface_hcr_pressure', 'HcrCoresInterface_hcr_temp', 'HcrCoresInterface_horizon_meth', 'HcrCoresInterface_lat_lon', 'HcrCoresInterface_lithology', 'HcrCoresInterface_magnesium', 'HcrCoresInterface_misc_param', 'HcrCoresInterface_nitrate', 'HcrCoresInterface_nitrite', 'HcrCoresInterface_org_count_qpcr_info', 'HcrCoresInterface_organism_count', 'HcrCoresInterface_owc_tvdss', 'HcrCoresInterface_oxy_stat_samp', 'HcrCoresInterface_permeability', 'HcrCoresInterface_ph', 'HcrCoresInterface_ph_meth', 'HcrCoresInterface_porosity', 'HcrCoresInterface_potassium', 'HcrCoresInterface_pour_point', 'HcrCoresInterface_pressure', 'HcrCoresInterface_reservoir', 'HcrCoresInterface_resins_pc', 'HcrCoresInterface_salinity', 'HcrCoresInterface_samp_collec_device', 'HcrCoresInterface_samp_collec_method', 'HcrCoresInterface_samp_mat_process', 'HcrCoresInterface_samp_md', 'HcrCoresInterface_samp_size', 'HcrCoresInterface_samp_store_dur', 'HcrCoresInterface_samp_store_loc', 'HcrCoresInterface_samp_store_temp', 'HcrCoresInterface_samp_subtype', 'HcrCoresInterface_samp_transport_cond', 'HcrCoresInterface_samp_tvdss', 'HcrCoresInterface_samp_type', 'HcrCoresInterface_samp_well_name', 'HcrCoresInterface_saturates_pc', 'HcrCoresInterface_size_frac', 'HcrCoresInterface_sodium', 'HcrCoresInterface_specific_ecosystem', 'HcrCoresInterface_sr_dep_env', 'HcrCoresInterface_sr_geol_age', 'HcrCoresInterface_sr_kerog_type', 'HcrCoresInterface_sr_lithology', 'HcrCoresInterface_sulfate', 'HcrCoresInterface_sulfate_fw', 'HcrCoresInterface_sulfide', 'HcrCoresInterface_suspend_solids', 'HcrCoresInterface_tan', 'HcrCoresInterface_temp', 'HcrCoresInterface_toluene', 'HcrCoresInterface_tot_iron', 'HcrCoresInterface_tot_nitro', 'HcrCoresInterface_tot_phosp', 'HcrCoresInterface_tot_sulfur', 'HcrCoresInterface_tvdss_of_hcr_press', 'HcrCoresInterface_tvdss_of_hcr_temp', 'HcrCoresInterface_vfa', 'HcrCoresInterface_vfa_fw', 'HcrCoresInterface_viscosity', 'HcrCoresInterface_win', 'HcrCoresInterface_xylene', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'additional_info': SlotDefinition(name='additional_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Information that doesn't fit anywhere else. Can also be used to propose new entries for fields with controlled vocabulary\", alt_descriptions={}, title='additional info', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['additional info'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=290, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000300', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'api': SlotDefinition(name='api', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degrees API', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1¬∞ API)', alt_descriptions={}, title='API gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['API gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=291, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000157', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aromatics_pc': SlotDefinition(name='aromatics_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='aromatics wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aromatics wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=292, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000133', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asphaltenes_pc': SlotDefinition(name='asphaltenes_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='asphaltenes wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['asphaltenes wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=293, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000135', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'basin': SlotDefinition(name='basin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the basin (e.g. Campos)', alt_descriptions={}, title='basin name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['basin name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=294, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000290', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'benzene': SlotDefinition(name='benzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of benzene in the sample', alt_descriptions={}, title='benzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['benzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=295, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000153', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depos_env': SlotDefinition(name='depos_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Continental - Alluvial', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=304, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000992', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='depos_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_iron': SlotDefinition(name='diss_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved iron in the sample', alt_descriptions={}, title='dissolved iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=305, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000139', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen_fluid': SlotDefinition(name='diss_oxygen_fluid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).', alt_descriptions={}, title='dissolved oxygen in fluids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen in fluids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=306, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000438', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ethylbenzene': SlotDefinition(name='ethylbenzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ethylbenzene in the sample', alt_descriptions={}, title='ethylbenzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ethylbenzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=309, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000155', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'field': SlotDefinition(name='field', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the hydrocarbon field (e.g. Albacora)', alt_descriptions={}, title='field name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['field name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=310, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000291', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hc_produced': SlotDefinition(name='hc_produced', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon type produced', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Gas', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon type produced'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=313, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000989', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hc_produced_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr': SlotDefinition(name='hcr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main Hydrocarbon Resource type. The term \"Hydrocarbon Resource\" HCR defined as a natural environmental feature containing large amounts of hydrocarbons at high concentrations potentially suitable for commercial exploitation. This term should not be confused with the Hydrocarbon Occurrence term which also includes hydrocarbon-rich environments with currently limited commercial interest such as seeps, outcrops, gas hydrates etc. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Oil Sand', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=314, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000988', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_fw_salinity': SlotDefinition(name='hcr_fw_salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS', alt_descriptions={}, title='formation water salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['formation water salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=315, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000406', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_geol_age': SlotDefinition(name='hcr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=316, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000993', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_pressure': SlotDefinition(name='hcr_pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere, kilopascal', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original pressure of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=317, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000395', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_temp': SlotDefinition(name='hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original temperature of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='150-295 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=318, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000393', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lithology': SlotDefinition(name='lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Volcanic', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=336, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000990', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_count_qpcr_info': SlotDefinition(name='org_count_qpcr_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gene name;FWD:forward primer sequence;REV:reverse primer sequence;initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per gram (or ml or cm^2)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='If qpcr was used for the cell count, the target gene name, the primer sequence and the cycling conditions should also be provided. (Example: 16S rrna; FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min; annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min; 30 cycles)', alt_descriptions={}, title='organism count qPCR information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count qPCR information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=337, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};FWD:{dna};REV:{dna};initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', singular_name=None, domain=None, slot_uri='MIXS:0000099', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owc_tvdss': SlotDefinition(name='owc_tvdss', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Depth of the original oil water contact (OWC) zone (average) (m TVDSS)', alt_descriptions={}, title='oil water contact depth', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['oil water contact depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=339, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000405', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permeability': SlotDefinition(name='permeability', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mD', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the ability of a hydrocarbon resource to allow fluids to pass through it. (Additional information: https://en.wikipedia.org/wiki/Permeability_(earth_sciences))', alt_descriptions={}, title='permeability', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['permeability'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=340, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{integer} - {integer} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000404', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'porosity': SlotDefinition(name='porosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Porosity of deposited sediment is volume of voids divided by the total volume of sample', alt_descriptions={}, title='porosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['porosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000211', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pour_point': SlotDefinition(name='pour_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high¬†pour point¬†is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)', alt_descriptions={}, title='pour point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pour point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=341, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000127', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reservoir': SlotDefinition(name='reservoir', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the reservoir (e.g. Carapebus)', alt_descriptions={}, title='reservoir name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reservoir name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=347, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000303', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'resins_pc': SlotDefinition(name='resins_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='resins wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['resins wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=348, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000134', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_md': SlotDefinition(name='samp_md', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='In non deviated well, measured depth is equal to the true vertical depth, TVD (TVD=TVDSS plus the reference or datum it refers to). In deviated wells, the MD is the length of trajectory of the borehole measured from the same reference or datum. Common datums used are ground level (GL), drilling rig floor (DF), rotary table (RT), kelly bushing (KB) and mean sea level (MSL). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample measured depth', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1534 meter;MSL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample measured depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=351, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000413', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_subtype': SlotDefinition(name='samp_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of sample sub-type. For example if \"sample type\" is \"Produced Water\" then subtype could be \"Oil Phase\" or \"Water Phase\". If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample subtype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biofilm', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample subtype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=354, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000999', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_subtype_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_transport_cond': SlotDefinition(name='samp_transport_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='days;degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sample transport duration (in days or hrs) and temperature the sample was exposed to (e.g. 5.5 days; 20 ¬∞C)', alt_descriptions={}, title='sample transport conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 days;-20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample transport conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=355, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000410', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_tvdss': SlotDefinition(name='samp_tvdss', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Depth of the sample i.e. The vertical distance between the sea level and the sampled position in the subsurface. Depth can be reported as an interval for subsurface samples e.g. 1325.75-1362.25 m', alt_descriptions={}, title='sample true vertical depth subsea', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample true vertical depth subsea'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=356, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000409', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_type': SlotDefinition(name='samp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='GENEPIO:0001246', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material from which the sample was obtained. For the Hydrocarbon package, samples include types like core, rock trimmings, drill cuttings, piping section, coupon, pigging debris, solid deposit, produced fluid, produced water, injected water, swabs, etc. For the Food Package, samples are usually categorized as food, body products or tissues, or environmental material. This field accepts terms listed under environmental specimen (http://purl.obolibrary.org/obo/GENEPIO_0001246).', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='built environment sample [GENEPIO:0001248]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=357, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000998', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_well_name': SlotDefinition(name='samp_well_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the well (e.g. BXA1123) where sample was taken', alt_descriptions={}, title='sample well name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample well name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=358, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000296', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'saturates_pc': SlotDefinition(name='saturates_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='saturates wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['saturates wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=359, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000131', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_dep_env': SlotDefinition(name='sr_dep_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Source rock depositional environment (https://en.wikipedia.org/wiki/Source_rock). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Marine', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=366, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000996', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_dep_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_geol_age': SlotDefinition(name='sr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of source rock (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=367, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000997', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_kerog_type': SlotDefinition(name='sr_kerog_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Origin of kerogen. Type I: Algal (aquatic), Type II: planktonic and soft plant material (aquatic or terrestrial), Type III: terrestrial woody/ fibrous plant material (terrestrial), Type IV: oxidized recycled woody debris (terrestrial) (additional information: https://en.wikipedia.org/wiki/Kerogen). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock kerogen type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Type IV', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock kerogen type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=368, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000994', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_kerog_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sr_lithology': SlotDefinition(name='sr_lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Lithology of source rock (https://en.wikipedia.org/wiki/Source_rock). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='source rock lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Coal', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['source rock lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=369, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000995', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sr_lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate_fw': SlotDefinition(name='sulfate_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original sulfate concentration in the hydrocarbon resource', alt_descriptions={}, title='sulfate in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=370, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000407', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tan': SlotDefinition(name='tan', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total Acid Number¬†(TAN) is a measurement of acidity that is determined by the amount of¬†potassium hydroxide¬†in milligrams that is needed to neutralize the acids in one gram of oil.¬†It is an important quality measurement of¬†crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)', alt_descriptions={}, title='total acid number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total acid number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=373, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000120', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'toluene': SlotDefinition(name='toluene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of toluene in the sample', alt_descriptions={}, title='toluene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['toluene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=375, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000154', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_iron': SlotDefinition(name='tot_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, milligram per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total iron in the sample', alt_descriptions={}, title='total iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=376, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000105', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_sulfur': SlotDefinition(name='tot_sulfur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total sulfur in the sample', alt_descriptions={}, title='total sulfur', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total sulfur'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=379, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000419', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_press': SlotDefinition(name='tvdss_of_hcr_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=380, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000397', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_temp': SlotDefinition(name='tvdss_of_hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=381, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000394', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa': SlotDefinition(name='vfa', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of Volatile Fatty Acids in the sample', alt_descriptions={}, title='volatile fatty acids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile fatty acids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=382, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000152', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa_fw': SlotDefinition(name='vfa_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original volatile fatty acid concentration in the hydrocarbon resource', alt_descriptions={}, title='vfa in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['vfa in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=383, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000408', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'viscosity': SlotDefinition(name='viscosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cP at degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"A measure of oil's resistance¬†to gradual deformation by¬†shear stress¬†or¬†tensile stress (e.g. 3.5 cp; 100 ¬∞C)\", alt_descriptions={}, title='viscosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['viscosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=384, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000126', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'win': SlotDefinition(name='win', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier of a well or wellbore. This is part of the Global Framework for Well Identification initiative which is compiled by the Professional Petroleum Data Management Association (PPDM) in an effort to improve well identification systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)', alt_descriptions={}, title='well identification number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['well identification number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=388, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000297', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'xylene': SlotDefinition(name='xylene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of xylene in the sample', alt_descriptions={}, title='xylene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xylene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=389, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000156', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HcrCoresInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HcrFluidsSwabsInterface': ClassDefinition(name='HcrFluidsSwabsInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrFluidsSwabsInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='hcr_fluids_swabs dh_interface', alt_descriptions={}, title='Hcr Fluids Swabs', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['add_recov_method', 'additional_info', 'alkalinity', 'alkalinity_method', 'ammonium', 'api', 'aromatics_pc', 'asphaltenes_pc', 'basin', 'benzene', 'biocide', 'biocide_admin_method', 'calcium', 'chem_administration', 'chem_treat_method', 'chem_treatment', 'chloride', 'collection_date', 'density', 'depos_env', 'depth', 'diss_carb_dioxide', 'diss_inorg_carb', 'diss_inorg_phosp', 'diss_iron', 'diss_org_carb', 'diss_oxygen_fluid', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'ethylbenzene', 'experimental_factor', 'field', 'geo_loc_name', 'hc_produced', 'hcr', 'hcr_fw_salinity', 'hcr_geol_age', 'hcr_pressure', 'hcr_temp', 'horizon_meth', 'iw_bt_date_well', 'iwf', 'lat_lon', 'lithology', 'magnesium', 'misc_param', 'nitrate', 'nitrite', 'org_count_qpcr_info', 'organism_count', 'oxy_stat_samp', 'ph', 'ph_meth', 'potassium', 'pour_point', 'pressure', 'prod_rate', 'prod_start_date', 'reservoir', 'resins_pc', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_collect_point', 'samp_loc_corr_rate', 'samp_mat_process', 'samp_preserv', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'samp_subtype', 'samp_transport_cond', 'samp_type', 'samp_well_name', 'HcrFluidsSwabsInterface_sample_link', 'saturates_pc', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfate_fw', 'sulfide', 'suspend_solids', 'tan', 'temp', 'toluene', 'tot_iron', 'tot_nitro', 'tot_phosp', 'tot_sulfur', 'tvdss_of_hcr_press', 'tvdss_of_hcr_temp', 'vfa', 'vfa_fw', 'viscosity', 'water_cut', 'water_prod_rate', 'win', 'xylene', 'HcrFluidsSwabsInterface_add_recov_method', 'HcrFluidsSwabsInterface_additional_info', 'HcrFluidsSwabsInterface_alkalinity', 'HcrFluidsSwabsInterface_alkalinity_method', 'HcrFluidsSwabsInterface_ammonium', 'HcrFluidsSwabsInterface_api', 'HcrFluidsSwabsInterface_aromatics_pc', 'HcrFluidsSwabsInterface_asphaltenes_pc', 'HcrFluidsSwabsInterface_basin', 'HcrFluidsSwabsInterface_benzene', 'HcrFluidsSwabsInterface_biocide', 'HcrFluidsSwabsInterface_biocide_admin_method', 'HcrFluidsSwabsInterface_calcium', 'HcrFluidsSwabsInterface_chem_administration', 'HcrFluidsSwabsInterface_chem_treat_method', 'HcrFluidsSwabsInterface_chem_treatment', 'HcrFluidsSwabsInterface_chloride', 'HcrFluidsSwabsInterface_collection_date', 'HcrFluidsSwabsInterface_density', 'HcrFluidsSwabsInterface_depos_env', 'HcrFluidsSwabsInterface_depth', 'HcrFluidsSwabsInterface_diss_carb_dioxide', 'HcrFluidsSwabsInterface_diss_inorg_carb', 'HcrFluidsSwabsInterface_diss_inorg_phosp', 'HcrFluidsSwabsInterface_diss_iron', 'HcrFluidsSwabsInterface_diss_org_carb', 'HcrFluidsSwabsInterface_diss_oxygen_fluid', 'HcrFluidsSwabsInterface_ecosystem', 'HcrFluidsSwabsInterface_ecosystem_category', 'HcrFluidsSwabsInterface_ecosystem_subtype', 'HcrFluidsSwabsInterface_ecosystem_type', 'HcrFluidsSwabsInterface_elev', 'HcrFluidsSwabsInterface_env_broad_scale', 'HcrFluidsSwabsInterface_env_local_scale', 'HcrFluidsSwabsInterface_env_medium', 'HcrFluidsSwabsInterface_env_package', 'HcrFluidsSwabsInterface_ethylbenzene', 'HcrFluidsSwabsInterface_experimental_factor', 'HcrFluidsSwabsInterface_field', 'HcrFluidsSwabsInterface_geo_loc_name', 'HcrFluidsSwabsInterface_hc_produced', 'HcrFluidsSwabsInterface_hcr', 'HcrFluidsSwabsInterface_hcr_fw_salinity', 'HcrFluidsSwabsInterface_hcr_geol_age', 'HcrFluidsSwabsInterface_hcr_pressure', 'HcrFluidsSwabsInterface_hcr_temp', 'HcrFluidsSwabsInterface_horizon_meth', 'HcrFluidsSwabsInterface_iw_bt_date_well', 'HcrFluidsSwabsInterface_iwf', 'HcrFluidsSwabsInterface_lat_lon', 'HcrFluidsSwabsInterface_lithology', 'HcrFluidsSwabsInterface_magnesium', 'HcrFluidsSwabsInterface_misc_param', 'HcrFluidsSwabsInterface_nitrate', 'HcrFluidsSwabsInterface_nitrite', 'HcrFluidsSwabsInterface_org_count_qpcr_info', 'HcrFluidsSwabsInterface_organism_count', 'HcrFluidsSwabsInterface_oxy_stat_samp', 'HcrFluidsSwabsInterface_ph', 'HcrFluidsSwabsInterface_ph_meth', 'HcrFluidsSwabsInterface_potassium', 'HcrFluidsSwabsInterface_pour_point', 'HcrFluidsSwabsInterface_pressure', 'HcrFluidsSwabsInterface_prod_rate', 'HcrFluidsSwabsInterface_prod_start_date', 'HcrFluidsSwabsInterface_reservoir', 'HcrFluidsSwabsInterface_resins_pc', 'HcrFluidsSwabsInterface_salinity', 'HcrFluidsSwabsInterface_samp_collec_device', 'HcrFluidsSwabsInterface_samp_collec_method', 'HcrFluidsSwabsInterface_samp_collect_point', 'HcrFluidsSwabsInterface_samp_loc_corr_rate', 'HcrFluidsSwabsInterface_samp_mat_process', 'HcrFluidsSwabsInterface_samp_preserv', 'HcrFluidsSwabsInterface_samp_size', 'HcrFluidsSwabsInterface_samp_store_dur', 'HcrFluidsSwabsInterface_samp_store_loc', 'HcrFluidsSwabsInterface_samp_store_temp', 'HcrFluidsSwabsInterface_samp_subtype', 'HcrFluidsSwabsInterface_samp_transport_cond', 'HcrFluidsSwabsInterface_samp_type', 'HcrFluidsSwabsInterface_samp_well_name', 'HcrFluidsSwabsInterface_saturates_pc', 'HcrFluidsSwabsInterface_size_frac', 'HcrFluidsSwabsInterface_sodium', 'HcrFluidsSwabsInterface_specific_ecosystem', 'HcrFluidsSwabsInterface_sulfate', 'HcrFluidsSwabsInterface_sulfate_fw', 'HcrFluidsSwabsInterface_sulfide', 'HcrFluidsSwabsInterface_suspend_solids', 'HcrFluidsSwabsInterface_tan', 'HcrFluidsSwabsInterface_temp', 'HcrFluidsSwabsInterface_toluene', 'HcrFluidsSwabsInterface_tot_iron', 'HcrFluidsSwabsInterface_tot_nitro', 'HcrFluidsSwabsInterface_tot_phosp', 'HcrFluidsSwabsInterface_tot_sulfur', 'HcrFluidsSwabsInterface_tvdss_of_hcr_press', 'HcrFluidsSwabsInterface_tvdss_of_hcr_temp', 'HcrFluidsSwabsInterface_vfa', 'HcrFluidsSwabsInterface_vfa_fw', 'HcrFluidsSwabsInterface_viscosity', 'HcrFluidsSwabsInterface_water_cut', 'HcrFluidsSwabsInterface_water_prod_rate', 'HcrFluidsSwabsInterface_win', 'HcrFluidsSwabsInterface_xylene', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'add_recov_method': SlotDefinition(name='add_recov_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Additional (i.e. Secondary, tertiary, etc.) recovery methods deployed for increase of hydrocarbon recovery from resource and start date for each one of them. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='secondary and tertiary recovery methods and start date', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Polymer Addition;2018-06-21T14:30Z', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['secondary and tertiary recovery methods and start date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=289, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'additional_info': SlotDefinition(name='additional_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Information that doesn't fit anywhere else. Can also be used to propose new entries for fields with controlled vocabulary\", alt_descriptions={}, title='additional info', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['additional info'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=290, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000300', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'api': SlotDefinition(name='api', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degrees API', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1¬∞ API)', alt_descriptions={}, title='API gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['API gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=291, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000157', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aromatics_pc': SlotDefinition(name='aromatics_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='aromatics wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aromatics wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=292, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000133', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asphaltenes_pc': SlotDefinition(name='asphaltenes_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='asphaltenes wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['asphaltenes wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=293, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000135', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'basin': SlotDefinition(name='basin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the basin (e.g. Campos)', alt_descriptions={}, title='basin name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['basin name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=294, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000290', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'benzene': SlotDefinition(name='benzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of benzene in the sample', alt_descriptions={}, title='benzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['benzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=295, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000153', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biocide': SlotDefinition(name='biocide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;name;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of biocides (commercial name of product and supplier) and date of administration', alt_descriptions={}, title='biocide administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ALPHA 1427;Baker Hughes;2008-01-23', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biocide administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=297, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0001011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biocide_admin_method': SlotDefinition(name='biocide_admin_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;frequency;duration;duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method of biocide administration (dose, frequency, duration, time elapsed between last biociding and sampling) (e.g. 150 mg/l; weekly; 4 hr; 3 days)', alt_descriptions={}, title='biocide administration method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biocide administration method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=298, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000456', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_treat_method': SlotDefinition(name='chem_treat_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;frequency;duration;duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method of chemical administration(dose, frequency, duration, time elapsed between administration and sampling) (e.g. 50 mg/l; twice a week; 1 hr; 0 days)', alt_descriptions={}, title='chemical treatment method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical treatment method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=302, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration};{duration};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000457', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_treatment': SlotDefinition(name='chem_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;name;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='List of chemical compounds administered upstream the sampling location where sampling occurred (e.g. Glycols, H2S scavenger, corrosion and scale inhibitors, demulsifiers, and other production chemicals etc.). The commercial name of the product and name of the supplier should be provided. The date of administration should also be included', alt_descriptions={}, title='chemical treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='ACCENT 1125;DOW;2010-11-17', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=303, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0001012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depos_env': SlotDefinition(name='depos_env', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='depositional environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Continental - Alluvial', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depositional environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=304, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000992', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='depos_env_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_iron': SlotDefinition(name='diss_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved iron in the sample', alt_descriptions={}, title='dissolved iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=305, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000139', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen_fluid': SlotDefinition(name='diss_oxygen_fluid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).', alt_descriptions={}, title='dissolved oxygen in fluids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen in fluids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=306, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000438', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ethylbenzene': SlotDefinition(name='ethylbenzene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ethylbenzene in the sample', alt_descriptions={}, title='ethylbenzene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ethylbenzene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=309, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000155', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'field': SlotDefinition(name='field', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the hydrocarbon field (e.g. Albacora)', alt_descriptions={}, title='field name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['field name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=310, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000291', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hc_produced': SlotDefinition(name='hc_produced', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon type produced', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Gas', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon type produced'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=313, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000989', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hc_produced_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr': SlotDefinition(name='hcr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Main Hydrocarbon Resource type. The term \"Hydrocarbon Resource\" HCR defined as a natural environmental feature containing large amounts of hydrocarbons at high concentrations potentially suitable for commercial exploitation. This term should not be confused with the Hydrocarbon Occurrence term which also includes hydrocarbon-rich environments with currently limited commercial interest such as seeps, outcrops, gas hydrates etc. If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Oil Sand', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=314, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000988', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_fw_salinity': SlotDefinition(name='hcr_fw_salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS', alt_descriptions={}, title='formation water salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['formation water salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=315, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000406', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_geol_age': SlotDefinition(name='hcr_geol_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='hydrocarbon resource geological age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Silurian', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource geological age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=316, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000993', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='hcr_geol_age_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_pressure': SlotDefinition(name='hcr_pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere, kilopascal', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original pressure of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=317, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000395', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'hcr_temp': SlotDefinition(name='hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original temperature of the hydrocarbon resource', alt_descriptions={}, title='hydrocarbon resource original temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='150-295 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['hydrocarbon resource original temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=318, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000393', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iw_bt_date_well': SlotDefinition(name='iw_bt_date_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Injection water breakthrough date per well following a secondary and/or tertiary recovery', alt_descriptions={}, title='injection water breakthrough date of specific well', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['injection water breakthrough date of specific well'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=334, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iwf': SlotDefinition(name='iwf', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Proportion of the produced fluids derived from injected water at the time of sampling. (e.g. 87%)', alt_descriptions={}, title='injection water fraction', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['injection water fraction'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=335, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000455', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lithology': SlotDefinition(name='lithology', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='lithology', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Volcanic', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lithology'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=336, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000990', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='lithology_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_count_qpcr_info': SlotDefinition(name='org_count_qpcr_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gene name;FWD:forward primer sequence;REV:reverse primer sequence;initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per gram (or ml or cm^2)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='If qpcr was used for the cell count, the target gene name, the primer sequence and the cycling conditions should also be provided. (Example: 16S rrna; FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min; annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min; 30 cycles)', alt_descriptions={}, title='organism count qPCR information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count qPCR information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=337, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};FWD:{dna};REV:{dna};initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes; total cycles', singular_name=None, domain=None, slot_uri='MIXS:0000099', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pour_point': SlotDefinition(name='pour_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high¬†pour point¬†is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)', alt_descriptions={}, title='pour point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pour point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=341, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000127', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prod_rate': SlotDefinition(name='prod_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Oil and/or gas production rates per well (e.g. 524 m3 / day)', alt_descriptions={}, title='production rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['production rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=344, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000452', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prod_start_date': SlotDefinition(name='prod_start_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"Date of field's first production\", alt_descriptions={}, title='production start date', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['production start date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=345, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reservoir': SlotDefinition(name='reservoir', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the reservoir (e.g. Carapebus)', alt_descriptions={}, title='reservoir name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reservoir name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=347, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000303', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'resins_pc': SlotDefinition(name='resins_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='resins wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['resins wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=348, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000134', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collect_point': SlotDefinition(name='samp_collect_point', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sampling point on the asset were sample was collected (e.g. Wellhead, storage tank, separator, etc). If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample collection point', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='well', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection point'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=349, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001015', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_collect_point_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_loc_corr_rate': SlotDefinition(name='samp_loc_corr_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter per year', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Metal corrosion rate is the speed of metal deterioration due to environmental conditions. As environmental conditions change corrosion rates change accordingly. Therefore, long term corrosion rates are generally more informative than short term rates and for that reason they are preferred during reporting. In the case of suspected MIC, corrosion rate measurements at the time of sampling might provide insights into the involvement of certain microbial community members in MIC as well as potential microbial interplays', alt_descriptions={}, title='corrosion rate at sample location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['corrosion rate at sample location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=350, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000136', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_preserv': SlotDefinition(name='samp_preserv', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliliter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Preservative added to the sample (e.g. Rnalater, alcohol, formaldehyde, etc.). Where appropriate include volume added (e.g. Rnalater; 2 ml)', alt_descriptions={}, title='preservative added to sample', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['preservative added to sample'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=352, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000463', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_subtype': SlotDefinition(name='samp_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of sample sub-type. For example if \"sample type\" is \"Produced Water\" then subtype could be \"Oil Phase\" or \"Water Phase\". If \"other\" is specified, please propose entry in \"additional info\" field', alt_descriptions={}, title='sample subtype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biofilm', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample subtype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=354, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000999', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_subtype_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_transport_cond': SlotDefinition(name='samp_transport_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='days;degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sample transport duration (in days or hrs) and temperature the sample was exposed to (e.g. 5.5 days; 20 ¬∞C)', alt_descriptions={}, title='sample transport conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 days;-20 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample transport conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=355, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000410', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_type': SlotDefinition(name='samp_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='GENEPIO:0001246', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The type of material from which the sample was obtained. For the Hydrocarbon package, samples include types like core, rock trimmings, drill cuttings, piping section, coupon, pigging debris, solid deposit, produced fluid, produced water, injected water, swabs, etc. For the Food Package, samples are usually categorized as food, body products or tissues, or environmental material. This field accepts terms listed under environmental specimen (http://purl.obolibrary.org/obo/GENEPIO_0001246).', alt_descriptions={}, title='sample type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='built environment sample [GENEPIO:0001248]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=357, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000998', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_well_name': SlotDefinition(name='samp_well_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of the well (e.g. BXA1123) where sample was taken', alt_descriptions={}, title='sample well name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample well name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=358, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000296', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'saturates_pc': SlotDefinition(name='saturates_pc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)', alt_descriptions={}, title='saturates wt%', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['saturates wt%'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=359, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000131', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate_fw': SlotDefinition(name='sulfate_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original sulfate concentration in the hydrocarbon resource', alt_descriptions={}, title='sulfate in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=370, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000407', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tan': SlotDefinition(name='tan', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total Acid Number¬†(TAN) is a measurement of acidity that is determined by the amount of¬†potassium hydroxide¬†in milligrams that is needed to neutralize the acids in one gram of oil.¬†It is an important quality measurement of¬†crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)', alt_descriptions={}, title='total acid number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total acid number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=373, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000120', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'toluene': SlotDefinition(name='toluene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of toluene in the sample', alt_descriptions={}, title='toluene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['toluene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=375, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000154', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_iron': SlotDefinition(name='tot_iron', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, milligram per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total iron in the sample', alt_descriptions={}, title='total iron', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total iron'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=376, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000105', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_sulfur': SlotDefinition(name='tot_sulfur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of total sulfur in the sample', alt_descriptions={}, title='total sulfur', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total sulfur'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=379, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000419', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_press': SlotDefinition(name='tvdss_of_hcr_press', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=380, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000397', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tvdss_of_hcr_temp': SlotDefinition(name='tvdss_of_hcr_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).', alt_descriptions={}, title='depth (TVDSS) of hydrocarbon resource temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth (TVDSS) of hydrocarbon resource temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=381, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000394', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa': SlotDefinition(name='vfa', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of Volatile Fatty Acids in the sample', alt_descriptions={}, title='volatile fatty acids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['volatile fatty acids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=382, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000152', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'vfa_fw': SlotDefinition(name='vfa_fw', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original volatile fatty acid concentration in the hydrocarbon resource', alt_descriptions={}, title='vfa in formation water', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['vfa in formation water'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=383, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000408', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'viscosity': SlotDefinition(name='viscosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cP at degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description=\"A measure of oil's resistance¬†to gradual deformation by¬†shear stress¬†or¬†tensile stress (e.g. 3.5 cp; 100 ¬∞C)\", alt_descriptions={}, title='viscosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['viscosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=384, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000126', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_cut': SlotDefinition(name='water_cut', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percent', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Current amount of water (%) in a produced fluid stream; or the average of the combined streams', alt_descriptions={}, title='water cut', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water cut'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=386, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000454', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_prod_rate': SlotDefinition(name='water_prod_rate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Water production rates per well (e.g. 987 m3 / day)', alt_descriptions={}, title='water production rate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water production rate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=387, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000453', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'win': SlotDefinition(name='win', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier of a well or wellbore. This is part of the Global Framework for Well Identification initiative which is compiled by the Professional Petroleum Data Management Association (PPDM) in an effort to improve well identification systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)', alt_descriptions={}, title='well identification number', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['well identification number'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=388, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000297', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'xylene': SlotDefinition(name='xylene', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of xylene in the sample', alt_descriptions={}, title='xylene', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xylene'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=389, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000156', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HcrFluidsSwabsInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'HostAssociatedInterface': ClassDefinition(name='HostAssociatedInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HostAssociatedInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='host_associated dh_interface', alt_descriptions={}, title='Host Associated', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alt', 'ances_data', 'biol_stat', 'blood_press_diast', 'blood_press_syst', 'chem_administration', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'genetic_mod', 'geo_loc_name', 'gravidity', 'horizon_meth', 'host_age', 'host_body_habitat', 'host_body_product', 'host_body_site', 'host_body_temp', 'host_color', 'host_common_name', 'host_diet', 'host_dry_mass', 'host_family_relation', 'host_genotype', 'host_growth_cond', 'host_height', 'host_last_meal', 'host_length', 'host_life_stage', 'host_phenotype', 'host_sex', 'host_shape', 'host_subject_id', 'host_subspecf_genlin', 'host_substrate', 'host_symbiont', 'host_taxid', 'host_tot_mass', 'lat_lon', 'misc_param', 'organism_count', 'oxy_stat_samp', 'perturbation', 'salinity', 'samp_capt_status', 'samp_collec_device', 'samp_collec_method', 'samp_dis_stage', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'HostAssociatedInterface_sample_link', 'size_frac', 'specific_ecosystem', 'temp', 'HostAssociatedInterface_alt', 'HostAssociatedInterface_ances_data', 'HostAssociatedInterface_biol_stat', 'HostAssociatedInterface_blood_press_diast', 'HostAssociatedInterface_blood_press_syst', 'HostAssociatedInterface_chem_administration', 'HostAssociatedInterface_collection_date', 'HostAssociatedInterface_depth', 'HostAssociatedInterface_ecosystem', 'HostAssociatedInterface_ecosystem_category', 'HostAssociatedInterface_ecosystem_subtype', 'HostAssociatedInterface_ecosystem_type', 'HostAssociatedInterface_elev', 'HostAssociatedInterface_env_broad_scale', 'HostAssociatedInterface_env_local_scale', 'HostAssociatedInterface_env_medium', 'HostAssociatedInterface_env_package', 'HostAssociatedInterface_experimental_factor', 'HostAssociatedInterface_genetic_mod', 'HostAssociatedInterface_geo_loc_name', 'HostAssociatedInterface_gravidity', 'HostAssociatedInterface_horizon_meth', 'HostAssociatedInterface_host_age', 'HostAssociatedInterface_host_body_habitat', 'HostAssociatedInterface_host_body_product', 'HostAssociatedInterface_host_body_site', 'HostAssociatedInterface_host_body_temp', 'HostAssociatedInterface_host_color', 'HostAssociatedInterface_host_common_name', 'HostAssociatedInterface_host_diet', 'HostAssociatedInterface_host_dry_mass', 'HostAssociatedInterface_host_family_relation', 'HostAssociatedInterface_host_genotype', 'HostAssociatedInterface_host_growth_cond', 'HostAssociatedInterface_host_height', 'HostAssociatedInterface_host_last_meal', 'HostAssociatedInterface_host_length', 'HostAssociatedInterface_host_life_stage', 'HostAssociatedInterface_host_phenotype', 'HostAssociatedInterface_host_sex', 'HostAssociatedInterface_host_shape', 'HostAssociatedInterface_host_subject_id', 'HostAssociatedInterface_host_subspecf_genlin', 'HostAssociatedInterface_host_substrate', 'HostAssociatedInterface_host_symbiont', 'HostAssociatedInterface_host_taxid', 'HostAssociatedInterface_host_tot_mass', 'HostAssociatedInterface_lat_lon', 'HostAssociatedInterface_misc_param', 'HostAssociatedInterface_organism_count', 'HostAssociatedInterface_oxy_stat_samp', 'HostAssociatedInterface_perturbation', 'HostAssociatedInterface_salinity', 'HostAssociatedInterface_samp_capt_status', 'HostAssociatedInterface_samp_collec_device', 'HostAssociatedInterface_samp_collec_method', 'HostAssociatedInterface_samp_dis_stage', 'HostAssociatedInterface_samp_mat_process', 'HostAssociatedInterface_samp_size', 'HostAssociatedInterface_samp_store_dur', 'HostAssociatedInterface_samp_store_loc', 'HostAssociatedInterface_samp_store_temp', 'HostAssociatedInterface_size_frac', 'HostAssociatedInterface_specific_ecosystem', 'HostAssociatedInterface_temp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ances_data': SlotDefinition(name='ances_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about either pedigree or other ancestral information description (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A x B) x B] x B)', alt_descriptions={}, title='ancestral data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A/3*B', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestral data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=237, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000247', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biol_stat': SlotDefinition(name='biol_stat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The level of genome modification.', alt_descriptions={}, title='biological status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='natural', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biological status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=239, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000858', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biol_stat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'blood_press_diast': SlotDefinition(name='blood_press_diast', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter mercury', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Resting diastolic blood pressure, measured as mm mercury', alt_descriptions={}, title='host blood pressure diastolic', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host blood pressure diastolic'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=299, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000258', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'blood_press_syst': SlotDefinition(name='blood_press_syst', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter mercury', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Resting systolic blood pressure, measured as mm mercury', alt_descriptions={}, title='host blood pressure systolic', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host blood pressure systolic'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=300, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000259', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'genetic_mod': SlotDefinition(name='genetic_mod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection', alt_descriptions={}, title='genetic modification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aox1A transgenic', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['genetic modification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=244, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000859', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gravidity': SlotDefinition(name='gravidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gravidity status;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Whether or not subject is gravid, and if yes date due or date post-conception, specifying which is used', alt_descriptions={}, title='gravidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='yes;due date:2018-05-11', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gravidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=312, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{boolean};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000875', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_age': SlotDefinition(name='host_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year, day, hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees', alt_descriptions={}, title='host age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 days', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=249, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000255', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_habitat': SlotDefinition(name='host_body_habitat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Original body habitat where the sample was obtained from', alt_descriptions={}, title='host body habitat', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nasopharynx', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body habitat'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=319, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000866', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_product': SlotDefinition(name='host_body_product', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='FMA or UBERON', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Substance produced by the body, e.g. Stool, mucus, where the sample was obtained from. For foundational model of anatomy ontology (fma) or Uber-anatomy ontology (UBERON) terms, please see https://www.ebi.ac.uk/ols/ontologies/fma or https://www.ebi.ac.uk/ols/ontologies/uberon', alt_descriptions={}, title='host body product', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Portion of mucus [fma66938]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body product'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=320, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000888', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_site': SlotDefinition(name='host_body_site', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='FMA or UBERON', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of body site where the sample was obtained from, such as a specific organ or tissue (tongue, lung etc...). For foundational model of anatomy ontology (fma) (v 4.11.0) or Uber-anatomy ontology (UBERON) (v releases/2014-06-15) terms, please see http://purl.bioontology.org/ontology/FMA or http://purl.bioontology.org/ontology/UBERON', alt_descriptions={}, title='host body site', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='gill [UBERON:0002535]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body site'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=321, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000867', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_body_temp': SlotDefinition(name='host_body_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Core body temperature of the host when sample was collected', alt_descriptions={}, title='host body temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host body temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=322, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000274', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_color': SlotDefinition(name='host_color', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='color', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The color of host', alt_descriptions={}, title='host color', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host color'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=323, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000260', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_common_name': SlotDefinition(name='host_common_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Common name of the host.', alt_descriptions={}, title='host common name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='human', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host common name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=250, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000248', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_diet': SlotDefinition(name='host_diet', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diet type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of diet depending on the host, for animals omnivore, herbivore etc., for humans high-fat, meditteranean etc.; can include multiple diet types', alt_descriptions={}, title='host diet', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='herbivore', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host diet'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=324, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000869', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_dry_mass': SlotDefinition(name='host_dry_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of dry mass', alt_descriptions={}, title='host dry mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host dry mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=251, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000257', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_family_relation': SlotDefinition(name='host_family_relation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='relationship type;arbitrary identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Familial relationships to other hosts in the same study; can include multiple relationships', alt_descriptions={}, title='host family relationship', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='offspring;Mussel25', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host family relationship'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=325, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text}', singular_name=None, domain=None, slot_uri='MIXS:0000872', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_genotype': SlotDefinition(name='host_genotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='genotype', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Observed genotype', alt_descriptions={}, title='host genotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='C57BL/6', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host genotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=252, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000365', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_growth_cond': SlotDefinition(name='host_growth_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Literature reference giving growth conditions of the host', alt_descriptions={}, title='host growth conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://academic.oup.com/icesjms/article/68/2/349/617247', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host growth conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=326, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000871', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_height': SlotDefinition(name='host_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The height of subject', alt_descriptions={}, title='host height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=253, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000264', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_last_meal': SlotDefinition(name='host_last_meal', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='content;duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Content of last meal and time since feeding; can include multiple values', alt_descriptions={}, title='host last meal', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='corn feed;P2H', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host last meal'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=327, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000870', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_length': SlotDefinition(name='host_length', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length of subject', alt_descriptions={}, title='host length', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host length'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=254, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000256', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_life_stage': SlotDefinition(name='host_life_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='stage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of life stage of host', alt_descriptions={}, title='host life stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='adult', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host life stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=255, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000251', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_phenotype': SlotDefinition(name='host_phenotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PATO or HP', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Phenotype of human or other host. For phenotypic quality ontology (pato) (v 2018-03-27) terms, please see http://purl.bioontology.org/ontology/pato. For Human Phenotype Ontology (HP) (v 2018-06-13) please see http://purl.bioontology.org/ontology/HP', alt_descriptions={}, title='host phenotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elongated [PATO:0001154]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host phenotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=256, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000874', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_sex': SlotDefinition(name='host_sex', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Gender or physical sex of the host.', alt_descriptions={}, title='host sex', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='non-binary', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host sex'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=328, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000811', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='host_sex_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_shape': SlotDefinition(name='host_shape', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='shape', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Morphological shape of host', alt_descriptions={}, title='host shape', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='round', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host shape'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=329, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000261', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subject_id': SlotDefinition(name='host_subject_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='unique identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A unique identifier by which each subject can be referred to, de-identified.', alt_descriptions={}, title='host subject id', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='MPI123', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subject id'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=330, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000861', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subspecf_genlin': SlotDefinition(name='host_subspecf_genlin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about the genetic distinctness of the host organism below the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123.', alt_descriptions={}, title='host subspecific genetic lineage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='serovar:Newport, variety:glabrum, cultivar: Red Delicious', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subspecific genetic lineage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=257, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{rank name}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0001318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_substrate': SlotDefinition(name='host_substrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='substrate name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The growth substrate of the host.', alt_descriptions={}, title='host substrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rock', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host substrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=331, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000252', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_symbiont': SlotDefinition(name='host_symbiont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='species name or common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host.', alt_descriptions={}, title='observed host symbionts', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='flukeworms', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed host symbionts'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=258, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_taxid': SlotDefinition(name='host_taxid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCBI taxon identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='NCBI taxon id of the host, e.g. 9606', alt_descriptions={}, title='host taxid', deprecated=None, todos=[], notes=[], comments=['Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host taxid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=259, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000250', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_tot_mass': SlotDefinition(name='host_tot_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total mass of the host at collection, the unit depends on host', alt_descriptions={}, title='host total mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2500 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host total mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=260, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000263', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_capt_status': SlotDefinition(name='samp_capt_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reason for the sample', alt_descriptions={}, title='sample capture status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='farm sample', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample capture status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=282, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000860', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_capt_status_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_dis_stage': SlotDefinition(name='samp_dis_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of the disease at the time of sample collection, e.g. inoculation, penetration, infection, growth and reproduction, dissemination of pathogen.', alt_descriptions={}, title='sample disease stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='infection', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample disease stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=283, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000249', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_dis_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:HostAssociatedInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'JgiMgInterface': ClassDefinition(name='JgiMgInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiMgInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='jgi_mg dh_interface', alt_descriptions={}, title='JGI MG', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['dna_absorb1', 'dna_absorb2', 'JgiMgInterface_dna_concentration', 'JgiMgInterface_dna_cont_type', 'JgiMgInterface_dna_cont_well', 'JgiMgInterface_dna_container_id', 'JgiMgInterface_dna_dnase', 'JgiMgInterface_dna_isolate_meth', 'JgiMgInterface_dna_project_contact', 'JgiMgInterface_dna_samp_id', 'JgiMgInterface_dna_sample_format', 'JgiMgInterface_dna_sample_name', 'JgiMgInterface_dna_seq_project', 'JgiMgInterface_dna_seq_project_name', 'JgiMgInterface_dna_seq_project_pi', 'JgiMgInterface_dna_volume', 'JgiMgInterface_proposal_dna', 'dna_absorb1', 'dna_absorb2', 'dna_concentration', 'dna_cont_type', 'dna_cont_well', 'dna_container_id', 'dna_dnase', 'dna_isolate_meth', 'dna_project_contact', 'dna_samp_id', 'dna_sample_format', 'dna_sample_name', 'dna_seq_project', 'dna_seq_project_name', 'dna_seq_project_pi', 'dna_volume', 'proposal_dna', 'JgiMgInterface_dna_absorb1', 'JgiMgInterface_dna_absorb2', 'JgiMgInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'dna_absorb1': SlotDefinition(name='dna_absorb1', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/280 measurement of DNA sample purity', alt_descriptions={}, title='DNA absorbance 260/280', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='biomaterial_purity', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'ProcessedSample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_absorb2': SlotDefinition(name='dna_absorb2', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/230 measurement of DNA sample purity', alt_descriptions={}, title='DNA absorbance 260/230', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='biomaterial_purity', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_concentration': SlotDefinition(name='dna_concentration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA concentration in ng/ul', deprecated=None, todos=[], notes=[], comments=['Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['nmdc:nucleic_acid_concentration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'ProcessedSample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=2000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Tube or plate (96-well)', alt_descriptions={}, title='DNA container type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plate', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='JgiContTypeEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA plate position', deprecated=None, todos=[], notes=[], comments=[\"Required when 'plate' is selected for container type.\", 'Leave blank if the sample will be shipped in a tube.', 'JGI will not process samples in corner wells, so A1, A12, H1 and H12 will not pass validation.', 'For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8).'], examples=[Example(value='B2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{96 well plate pos}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_container_id': SlotDefinition(name='dna_container_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA container label', deprecated=None, todos=[], notes=[], comments=['Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label.'], examples=[Example(value='Pond_MT_041618', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text < 20 characters}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^.{1,20}$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_dnase': SlotDefinition(name='dna_dnase', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNase treatment DNA', deprecated=None, todos=[], notes=[], comments=['Note DNase treatment is required for all RNA samples.'], examples=[Example(value='no', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='YesNoEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_isolate_meth': SlotDefinition(name='dna_isolate_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Describe the method/protocol/kit used to extract DNA/RNA.', alt_descriptions={}, title='DNA isolation method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='phenol/chloroform extraction', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_project_contact': SlotDefinition(name='dna_project_contact', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project contact', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='John Jones', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_samp_id': SlotDefinition(name='dna_samp_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA sample ID', deprecated=None, todos=[\"Removed identifier = TRUE from dna_samp_ID in JGI_sample_slots, as a class can't have two identifiers. How to force uniqueness? Moot because that column will be prefilled?\"], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='187654', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_sample_format': SlotDefinition(name='dna_sample_format', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Solution in which the DNA sample has been suspended', alt_descriptions={}, title='DNA sample format', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Water', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='dna_sample_format_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_sample_name': SlotDefinition(name='dna_sample_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Give the DNA sample a name that is meaningful to you. Sample names must be unique across all JGI projects and contain a-z, A-Z, 0-9, - and _ only.', alt_descriptions={}, title='DNA sample name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='JGI_pond_041618', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project': SlotDefinition(name='dna_seq_project', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='1191234', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project_name': SlotDefinition(name='dna_seq_project_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project name', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='JGI Pond metagenomics', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_seq_project_pi': SlotDefinition(name='dna_seq_project_pi', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA seq project PI', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='Jane Johnson', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dna_volume': SlotDefinition(name='dna_volume', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA volume in ul', deprecated=None, todos=[], notes=[], comments=['Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager'], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'proposal_dna': SlotDefinition(name='proposal_dna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNA proposal ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='504000', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metagenomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:JgiMgInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description=\"DNA samples shipped to JGI for metagenomic analysis in tubes can't have any value for their plate position.\", alt_descriptions={}, title='dna_well_requires_plate', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None), ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_type': SlotDefinition(name='dna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'dna_cont_well': SlotDefinition(name='dna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description='DNA samples in plates must have a plate position that matches the regex. Note the requirement for an empty string in the tube case. Waiting for value_present validation to be added to runtime', alt_descriptions={}, title='dna_plate_requires_well', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None)], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'JgiMtInterface': ClassDefinition(name='JgiMtInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiMtInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='jgi_mt dh_interface', alt_descriptions={}, title='JGI MT', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['JgiMtInterface_dnase_rna', 'JgiMtInterface_proposal_rna', 'rna_absorb1', 'rna_absorb2', 'JgiMtInterface_rna_concentration', 'JgiMtInterface_rna_cont_type', 'JgiMtInterface_rna_cont_well', 'JgiMtInterface_rna_container_id', 'JgiMtInterface_rna_isolate_meth', 'JgiMtInterface_rna_project_contact', 'JgiMtInterface_rna_samp_id', 'JgiMtInterface_rna_sample_format', 'JgiMtInterface_rna_sample_name', 'JgiMtInterface_rna_seq_project', 'JgiMtInterface_rna_seq_project_name', 'JgiMtInterface_rna_seq_project_pi', 'JgiMtInterface_rna_volume', 'dnase_rna', 'proposal_rna', 'rna_absorb1', 'rna_absorb2', 'rna_concentration', 'rna_cont_type', 'rna_cont_well', 'rna_container_id', 'rna_isolate_meth', 'rna_project_contact', 'rna_samp_id', 'rna_sample_format', 'rna_sample_name', 'rna_seq_project', 'rna_seq_project_name', 'rna_seq_project_pi', 'rna_volume', 'JgiMtInterface_rna_absorb1', 'JgiMtInterface_rna_absorb2', 'JgiMtInterface_oxy_stat_samp', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'dnase_rna': SlotDefinition(name='dnase_rna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='DNase treated', deprecated=None, todos=[], notes=[], comments=['Note DNase treatment is required for all RNA samples.'], examples=[Example(value='no', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='YesNoEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'proposal_rna': SlotDefinition(name='proposal_rna', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA proposal ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='504000', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_absorb1': SlotDefinition(name='rna_absorb1', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/280 measurement of RNA sample purity', alt_descriptions={}, title='RNA absorbance 260/280', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='biomaterial_purity', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_absorb2': SlotDefinition(name='rna_absorb2', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='260/230 measurement of RNA sample purity', alt_descriptions={}, title='RNA absorbance 260/230', deprecated=None, todos=[], notes=[], comments=['Recommended value is between 1 and 3.'], examples=[Example(value='2.02', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='biomaterial_purity', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_concentration': SlotDefinition(name='rna_concentration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA concentration in ng/ul', deprecated=None, todos=[], notes=[], comments=['Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['nmdc:nucleic_acid_concentration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Tube or plate (96-well)', alt_descriptions={}, title='RNA container type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plate', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='JgiContTypeEnum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA plate position', deprecated=None, todos=[], notes=[], comments=[\"Required when 'plate' is selected for container type.\", 'Leave blank if the sample will be shipped in a tube.', 'JGI will not process samples in corner wells, so A1, A12, H1 and H12 will not pass validation.', 'For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8).'], examples=[Example(value='B2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{96 well plate pos}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_container_id': SlotDefinition(name='rna_container_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA container label', deprecated=None, todos=[], notes=[], comments=['Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label.'], examples=[Example(value='Pond_MT_041618', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text < 20 characters}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^.{1,20}$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_isolate_meth': SlotDefinition(name='rna_isolate_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Describe the method/protocol/kit used to extract DNA/RNA.', alt_descriptions={}, title='RNA isolation method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='phenol/chloroform extraction', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_project_contact': SlotDefinition(name='rna_project_contact', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project contact', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='John Jones', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_samp_id': SlotDefinition(name='rna_samp_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA sample ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='187654', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_sample_format': SlotDefinition(name='rna_sample_format', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Solution in which the RNA sample has been suspended', alt_descriptions={}, title='RNA sample format', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Water', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='rna_sample_format_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_sample_name': SlotDefinition(name='rna_sample_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Give the RNA sample a name that is meaningful to you. Sample names must be unique across all JGI projects and contain a-z, A-Z, 0-9, - and _ only.', alt_descriptions={}, title='RNA sample name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='JGI_pond_041618', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=2000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project': SlotDefinition(name='rna_seq_project', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project ID', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='1191234', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project_name': SlotDefinition(name='rna_seq_project_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project name', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='JGI Pond metatranscriptomics', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_seq_project_pi': SlotDefinition(name='rna_seq_project_pi', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA seq project PI', deprecated=None, todos=[], notes=[], comments=['Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled.'], examples=[Example(value='Jane Johnson', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rna_volume': SlotDefinition(name='rna_volume', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title='RNA volume in ul', deprecated=None, todos=[], notes=[], comments=['Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager'], examples=[Example(value='25', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='jgi_metatranscriptomics_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=1000, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:JgiMtInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description=\"RNA samples shipped to JGI for metagenomic analysis in tubes can't have any value for their plate position.\", alt_descriptions={}, title='rna_well_requires_plate', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None), ClassRule(preconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_type': SlotDefinition(name='rna_cont_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string='plate', equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), postconditions=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'rna_cont_well': SlotDefinition(name='rna_cont_well', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range=None, range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), elseconditions=None, bidirectional=None, open_world=None, rank=None, deactivated=None, extensions={}, annotations={}, description='RNA samples in plates must have a plate position that matches the regex. Note the requirement for an empty string in the tube case. Waiting for value_present validation to be added to runtime', alt_descriptions={}, title='rna_plate_requires_well', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None)], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'MiscEnvsInterface': ClassDefinition(name='MiscEnvsInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/MiscEnvsInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='misc_envs dh_interface', alt_descriptions={}, title='Misc Envs', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alt', 'ammonium', 'biomass', 'bromide', 'calcium', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'horizon_meth', 'lat_lon', 'misc_param', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'perturbation', 'ph', 'ph_meth', 'phosphate', 'phosplipid_fatt_acid', 'potassium', 'pressure', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'MiscEnvsInterface_sample_link', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'water_current', 'MiscEnvsInterface_alkalinity', 'MiscEnvsInterface_alt', 'MiscEnvsInterface_ammonium', 'MiscEnvsInterface_biomass', 'MiscEnvsInterface_bromide', 'MiscEnvsInterface_calcium', 'MiscEnvsInterface_chem_administration', 'MiscEnvsInterface_chloride', 'MiscEnvsInterface_chlorophyll', 'MiscEnvsInterface_collection_date', 'MiscEnvsInterface_density', 'MiscEnvsInterface_depth', 'MiscEnvsInterface_diether_lipids', 'MiscEnvsInterface_diss_carb_dioxide', 'MiscEnvsInterface_diss_hydrogen', 'MiscEnvsInterface_diss_inorg_carb', 'MiscEnvsInterface_diss_org_nitro', 'MiscEnvsInterface_diss_oxygen', 'MiscEnvsInterface_ecosystem', 'MiscEnvsInterface_ecosystem_category', 'MiscEnvsInterface_ecosystem_subtype', 'MiscEnvsInterface_ecosystem_type', 'MiscEnvsInterface_elev', 'MiscEnvsInterface_env_broad_scale', 'MiscEnvsInterface_env_local_scale', 'MiscEnvsInterface_env_medium', 'MiscEnvsInterface_env_package', 'MiscEnvsInterface_experimental_factor', 'MiscEnvsInterface_geo_loc_name', 'MiscEnvsInterface_horizon_meth', 'MiscEnvsInterface_lat_lon', 'MiscEnvsInterface_misc_param', 'MiscEnvsInterface_nitrate', 'MiscEnvsInterface_nitrite', 'MiscEnvsInterface_nitro', 'MiscEnvsInterface_org_carb', 'MiscEnvsInterface_org_matter', 'MiscEnvsInterface_org_nitro', 'MiscEnvsInterface_organism_count', 'MiscEnvsInterface_oxy_stat_samp', 'MiscEnvsInterface_perturbation', 'MiscEnvsInterface_ph', 'MiscEnvsInterface_ph_meth', 'MiscEnvsInterface_phosphate', 'MiscEnvsInterface_phosplipid_fatt_acid', 'MiscEnvsInterface_potassium', 'MiscEnvsInterface_pressure', 'MiscEnvsInterface_salinity', 'MiscEnvsInterface_samp_collec_device', 'MiscEnvsInterface_samp_collec_method', 'MiscEnvsInterface_samp_mat_process', 'MiscEnvsInterface_samp_size', 'MiscEnvsInterface_samp_store_dur', 'MiscEnvsInterface_samp_store_loc', 'MiscEnvsInterface_samp_store_temp', 'MiscEnvsInterface_silicate', 'MiscEnvsInterface_size_frac', 'MiscEnvsInterface_sodium', 'MiscEnvsInterface_specific_ecosystem', 'MiscEnvsInterface_sulfate', 'MiscEnvsInterface_sulfide', 'MiscEnvsInterface_temp', 'MiscEnvsInterface_water_current', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt': SlotDefinition(name='alt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description=\"Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air\", alt_descriptions={}, title='altitude', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['altitude'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000094', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_current': SlotDefinition(name='water_current', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per second, knots', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of magnitude and direction of flow within a fluid', alt_descriptions={}, title='water current', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 cubic meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water current'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=236, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000203', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:MiscEnvsInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'PlantAssociatedInterface': ClassDefinition(name='PlantAssociatedInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/PlantAssociatedInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='plant_associated dh_interface', alt_descriptions={}, title='Plant Associated', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['air_temp_regm', 'ances_data', 'antibiotic_regm', 'biol_stat', 'biotic_regm', 'chem_administration', 'chem_mutagen', 'climate_environment', 'collection_date', 'cult_root_med', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'fertilizer_regm', 'fungicide_regm', 'gaseous_environment', 'genetic_mod', 'geo_loc_name', 'gravity', 'growth_facil', 'growth_habit', 'growth_hormone_regm', 'herbicide_regm', 'horizon_meth', 'host_age', 'host_common_name', 'host_dry_mass', 'host_genotype', 'host_height', 'host_length', 'host_life_stage', 'host_phenotype', 'host_subspecf_genlin', 'host_symbiont', 'host_taxid', 'host_tot_mass', 'host_wet_mass', 'humidity_regm', 'lat_lon', 'light_regm', 'mechanical_damage', 'mineral_nutr_regm', 'misc_param', 'non_min_nutr_regm', 'organism_count', 'oxy_stat_samp', 'perturbation', 'pesticide_regm', 'ph_regm', 'plant_growth_med', 'plant_product', 'plant_sex', 'plant_struc', 'radiation_regm', 'rainfall_regm', 'root_cond', 'root_med_carbon', 'root_med_macronutr', 'root_med_micronutr', 'root_med_ph', 'root_med_regl', 'root_med_solid', 'root_med_suppl', 'salinity', 'salt_regm', 'samp_capt_status', 'samp_collec_device', 'samp_collec_method', 'samp_dis_stage', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'PlantAssociatedInterface_sample_link', 'season_environment', 'size_frac', 'specific_ecosystem', 'standing_water_regm', 'temp', 'tiss_cult_growth_med', 'water_temp_regm', 'watering_regm', 'PlantAssociatedInterface_air_temp_regm', 'PlantAssociatedInterface_ances_data', 'PlantAssociatedInterface_antibiotic_regm', 'PlantAssociatedInterface_biol_stat', 'PlantAssociatedInterface_biotic_regm', 'PlantAssociatedInterface_chem_administration', 'PlantAssociatedInterface_chem_mutagen', 'PlantAssociatedInterface_climate_environment', 'PlantAssociatedInterface_collection_date', 'PlantAssociatedInterface_cult_root_med', 'PlantAssociatedInterface_depth', 'PlantAssociatedInterface_ecosystem', 'PlantAssociatedInterface_ecosystem_category', 'PlantAssociatedInterface_ecosystem_subtype', 'PlantAssociatedInterface_ecosystem_type', 'PlantAssociatedInterface_elev', 'PlantAssociatedInterface_env_broad_scale', 'PlantAssociatedInterface_env_local_scale', 'PlantAssociatedInterface_env_medium', 'PlantAssociatedInterface_env_package', 'PlantAssociatedInterface_experimental_factor', 'PlantAssociatedInterface_fertilizer_regm', 'PlantAssociatedInterface_fungicide_regm', 'PlantAssociatedInterface_gaseous_environment', 'PlantAssociatedInterface_genetic_mod', 'PlantAssociatedInterface_geo_loc_name', 'PlantAssociatedInterface_gravity', 'PlantAssociatedInterface_growth_facil', 'PlantAssociatedInterface_growth_habit', 'PlantAssociatedInterface_growth_hormone_regm', 'PlantAssociatedInterface_herbicide_regm', 'PlantAssociatedInterface_horizon_meth', 'PlantAssociatedInterface_host_age', 'PlantAssociatedInterface_host_common_name', 'PlantAssociatedInterface_host_dry_mass', 'PlantAssociatedInterface_host_genotype', 'PlantAssociatedInterface_host_height', 'PlantAssociatedInterface_host_length', 'PlantAssociatedInterface_host_life_stage', 'PlantAssociatedInterface_host_phenotype', 'PlantAssociatedInterface_host_subspecf_genlin', 'PlantAssociatedInterface_host_symbiont', 'PlantAssociatedInterface_host_taxid', 'PlantAssociatedInterface_host_tot_mass', 'PlantAssociatedInterface_host_wet_mass', 'PlantAssociatedInterface_humidity_regm', 'PlantAssociatedInterface_lat_lon', 'PlantAssociatedInterface_light_regm', 'PlantAssociatedInterface_mechanical_damage', 'PlantAssociatedInterface_mineral_nutr_regm', 'PlantAssociatedInterface_misc_param', 'PlantAssociatedInterface_non_min_nutr_regm', 'PlantAssociatedInterface_organism_count', 'PlantAssociatedInterface_oxy_stat_samp', 'PlantAssociatedInterface_perturbation', 'PlantAssociatedInterface_pesticide_regm', 'PlantAssociatedInterface_ph_regm', 'PlantAssociatedInterface_plant_growth_med', 'PlantAssociatedInterface_plant_product', 'PlantAssociatedInterface_plant_sex', 'PlantAssociatedInterface_plant_struc', 'PlantAssociatedInterface_radiation_regm', 'PlantAssociatedInterface_rainfall_regm', 'PlantAssociatedInterface_root_cond', 'PlantAssociatedInterface_root_med_carbon', 'PlantAssociatedInterface_root_med_macronutr', 'PlantAssociatedInterface_root_med_micronutr', 'PlantAssociatedInterface_root_med_ph', 'PlantAssociatedInterface_root_med_regl', 'PlantAssociatedInterface_root_med_solid', 'PlantAssociatedInterface_root_med_suppl', 'PlantAssociatedInterface_salinity', 'PlantAssociatedInterface_salt_regm', 'PlantAssociatedInterface_samp_capt_status', 'PlantAssociatedInterface_samp_collec_device', 'PlantAssociatedInterface_samp_collec_method', 'PlantAssociatedInterface_samp_dis_stage', 'PlantAssociatedInterface_samp_mat_process', 'PlantAssociatedInterface_samp_size', 'PlantAssociatedInterface_samp_store_dur', 'PlantAssociatedInterface_samp_store_loc', 'PlantAssociatedInterface_samp_store_temp', 'PlantAssociatedInterface_season_environment', 'PlantAssociatedInterface_size_frac', 'PlantAssociatedInterface_specific_ecosystem', 'PlantAssociatedInterface_standing_water_regm', 'PlantAssociatedInterface_temp', 'PlantAssociatedInterface_tiss_cult_growth_med', 'PlantAssociatedInterface_water_temp_regm', 'PlantAssociatedInterface_watering_regm', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'air_temp_regm': SlotDefinition(name='air_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='temperature value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying temperatures; should include the temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include different temperature regimens', alt_descriptions={}, title='air temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000551', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ances_data': SlotDefinition(name='ances_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about either pedigree or other ancestral information description (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A x B) x B] x B)', alt_descriptions={}, title='ancestral data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A/3*B', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestral data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=237, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000247', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'antibiotic_regm': SlotDefinition(name='antibiotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='antibiotic name;antibiotic amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving antibiotic administration; should include the name of antibiotic, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple antibiotic regimens', alt_descriptions={}, title='antibiotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['antibiotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=238, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000553', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biol_stat': SlotDefinition(name='biol_stat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The level of genome modification.', alt_descriptions={}, title='biological status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='natural', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biological status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=239, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000858', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biol_stat_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_regm': SlotDefinition(name='biotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving use of biotic factors, such as bacteria, viruses or fungi.', alt_descriptions={}, title='biotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sample inoculated with Rhizobium spp. Culture', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001038', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_mutagen': SlotDefinition(name='chem_mutagen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='mutagen name;mutagen amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Treatment involving use of mutagens; should include the name of mutagen, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple mutagen regimens', alt_descriptions={}, title='chemical mutagen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical mutagen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=240, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000555', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'climate_environment': SlotDefinition(name='climate_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Treatment involving an exposure to a particular climate; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple climates', alt_descriptions={}, title='climate environment', deprecated=None, todos=['description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.', 'description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.'], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001040', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cult_root_med': SlotDefinition(name='cult_root_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name, PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name or reference for the hydroponic or in vitro culture rooting medium; can be the name of a commonly used medium or reference to a specific medium, e.g. Murashige and Skoog medium. If the medium has not been formally published, use the rooting medium descriptors.', alt_descriptions={}, title='culture rooting medium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='http://himedialabs.com/TD/PT158.pdf', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['culture rooting medium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=241, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001041', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fertilizer_regm': SlotDefinition(name='fertilizer_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='fertilizer name;fertilizer amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the use of fertilizers; should include the name of fertilizer, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple fertilizer regimens', alt_descriptions={}, title='fertilizer regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fertilizer regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=242, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000556', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fungicide_regm': SlotDefinition(name='fungicide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='fungicide name;fungicide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of fungicides; should include the name of fungicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple fungicide regimens', alt_descriptions={}, title='fungicide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fungicide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=243, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000557', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_environment': SlotDefinition(name='gaseous_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Use of conditions with differing gaseous environments; should include the name of gaseous compound, amount administered, treatment duration, interval and total experimental duration; can include multiple gaseous environment regimens', alt_descriptions={}, title='gaseous environment', deprecated=None, todos=[\"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\", \"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\"], notes=[], comments=[], examples=[Example(value='CO2; 500ppm above ambient; constant', description=None, object=None), Example(value='nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000558', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'genetic_mod': SlotDefinition(name='genetic_mod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection', alt_descriptions={}, title='genetic modification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aox1A transgenic', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['genetic modification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=244, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000859', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gravity': SlotDefinition(name='gravity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gravity factor value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per square second, g', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of gravity factor to study various types of responses in presence, absence or modified levels of gravity; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple treatments', alt_descriptions={}, title='gravity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gravity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=245, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000559', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_facil': SlotDefinition(name='growth_facil', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text or CO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of facility/location where the sample was harvested; controlled vocabulary: growth chamber, open top chamber, glasshouse, experimental garden, field.', alt_descriptions={}, title='growth facility', deprecated=None, todos=[], notes=['Removed from description: Alternatively use Crop Ontology (CO) terms'], comments=[], examples=[Example(value='Growth chamber [CO_715:0000189]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth facility'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001043', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='GrowthFacilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_habit': SlotDefinition(name='growth_habit', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Characteristic shape, appearance or growth form of a plant species', alt_descriptions={}, title='growth habit', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='spreading', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth habit'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=246, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001044', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='growth_habit_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_hormone_regm': SlotDefinition(name='growth_hormone_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='growth hormone name;growth hormone amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of growth hormones; should include the name of growth hormone, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple growth hormone regimens', alt_descriptions={}, title='growth hormone regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth hormone regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=247, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000560', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'herbicide_regm': SlotDefinition(name='herbicide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='herbicide name;herbicide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of herbicides; information about treatment involving use of growth hormones; should include the name of herbicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='herbicide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['herbicide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=248, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000561', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_age': SlotDefinition(name='host_age', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='year, day, hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees', alt_descriptions={}, title='host age', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 days', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host age'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=249, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000255', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_common_name': SlotDefinition(name='host_common_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Common name of the host.', alt_descriptions={}, title='host common name', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='human', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host common name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=250, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000248', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_dry_mass': SlotDefinition(name='host_dry_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of dry mass', alt_descriptions={}, title='host dry mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host dry mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=251, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000257', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_genotype': SlotDefinition(name='host_genotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='genotype', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Observed genotype', alt_descriptions={}, title='host genotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='C57BL/6', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host genotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=252, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000365', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_height': SlotDefinition(name='host_height', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The height of subject', alt_descriptions={}, title='host height', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host height'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=253, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000264', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_length': SlotDefinition(name='host_length', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='centimeter, millimeter, meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The length of subject', alt_descriptions={}, title='host length', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host length'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=254, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000256', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_life_stage': SlotDefinition(name='host_life_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='stage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of life stage of host', alt_descriptions={}, title='host life stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='adult', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host life stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=255, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000251', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_phenotype': SlotDefinition(name='host_phenotype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PATO or HP', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Phenotype of human or other host. For phenotypic quality ontology (pato) (v 2018-03-27) terms, please see http://purl.bioontology.org/ontology/pato. For Human Phenotype Ontology (HP) (v 2018-06-13) please see http://purl.bioontology.org/ontology/HP', alt_descriptions={}, title='host phenotype', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='elongated [PATO:0001154]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host phenotype'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=256, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000874', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_subspecf_genlin': SlotDefinition(name='host_subspecf_genlin', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about the genetic distinctness of the host organism below the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123.', alt_descriptions={}, title='host subspecific genetic lineage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='serovar:Newport, variety:glabrum, cultivar: Red Delicious', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host subspecific genetic lineage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=257, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{rank name}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0001318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_symbiont': SlotDefinition(name='host_symbiont', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='species name or common name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host.', alt_descriptions={}, title='observed host symbionts', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='flukeworms', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed host symbionts'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=258, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_taxid': SlotDefinition(name='host_taxid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='NCBI taxon identifier', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='NCBI taxon id of the host, e.g. 9606', alt_descriptions={}, title='host taxid', deprecated=None, todos=[], notes=[], comments=['Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host taxid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=259, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000250', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_tot_mass': SlotDefinition(name='host_tot_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total mass of the host at collection, the unit depends on host', alt_descriptions={}, title='host total mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2500 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host total mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=260, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000263', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'host_wet_mass': SlotDefinition(name='host_wet_mass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of wet mass', alt_descriptions={}, title='host wet mass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1500 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['host wet mass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=261, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000567', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity_regm': SlotDefinition(name='humidity_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='humidity value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying degree of humidity; information about treatment involving use of growth hormones; should include amount of humidity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='humidity regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000568', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_regm': SlotDefinition(name='light_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='exposure type;light intensity;light quality', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux; micrometer, nanometer, angstrom', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving exposure to light, including both light intensity and quality.', alt_descriptions={}, title='light regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='incandescant light;10 lux;450 nanometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000569', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mechanical_damage': SlotDefinition(name='mechanical_damage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='damage type;body site', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about any mechanical damage exerted on the plant; can include multiple damages and sites', alt_descriptions={}, title='mechanical damage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='pruning;bark', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mechanical damage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=262, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{text}', singular_name=None, domain=None, slot_uri='MIXS:0001052', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mineral_nutr_regm': SlotDefinition(name='mineral_nutr_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='mineral nutrient name;mineral nutrient amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the use of mineral supplements; should include the name of mineral nutrient, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple mineral nutrient regimens', alt_descriptions={}, title='mineral nutrient regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mineral nutrient regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=263, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000570', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_min_nutr_regm': SlotDefinition(name='non_min_nutr_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='non-mineral nutrient name;non-mineral nutrient amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving the exposure of plant to non-mineral nutrient such as oxygen, hydrogen or carbon; should include the name of non-mineral nutrient, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple non-mineral nutrient regimens', alt_descriptions={}, title='non-mineral nutrient regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='carbon dioxide;10 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-mineral nutrient regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=264, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000571', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pesticide_regm': SlotDefinition(name='pesticide_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pesticide name;pesticide amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of insecticides; should include the name of pesticide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple pesticide regimens', alt_descriptions={}, title='pesticide regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pesticide regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=265, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000573', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_regm': SlotDefinition(name='ph_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving exposure of plants to varying levels of ph of the growth media, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimen', alt_descriptions={}, title='pH regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=266, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001056', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_growth_med': SlotDefinition(name='plant_growth_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='EO or enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specification of the media for growing the plants or tissue cultured samples, e.g. soil, aeroponic, hydroponic, in vitro solid culture medium, in vitro liquid culture medium. Recommended value is a specific value from EO:plant growth medium (follow this link for terms http://purl.obolibrary.org/obo/EO_0007147) or other controlled vocabulary', alt_descriptions={}, title='plant growth medium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='hydroponic plant culture media [EO:0007067]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant growth medium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=267, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001057', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_product': SlotDefinition(name='plant_product', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='product name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Substance produced by the plant, where the sample was obtained from', alt_descriptions={}, title='plant product', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='xylem sap [PO:0025539]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant product'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=268, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001058', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_sex': SlotDefinition(name='plant_sex', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sex of the reproductive parts on the whole plant, e.g. pistillate, staminate, monoecieous, hermaphrodite.', alt_descriptions={}, title='plant sex', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Hermaphroditic', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant sex'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=269, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001059', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='plant_sex_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'plant_struc': SlotDefinition(name='plant_struc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Name of plant structure the sample was obtained from; for Plant Ontology (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO, e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex of it can be recorded here.', alt_descriptions={}, title='plant structure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='epidermis [PO:0005679]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['plant structure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=270, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001060', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'radiation_regm': SlotDefinition(name='radiation_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='radiation type name;radiation amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='rad, gray', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving exposure of plant or a plant part to a particular radiation regimen; should include the radiation type, amount or intensity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple radiation regimens', alt_descriptions={}, title='radiation regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['radiation regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=271, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000575', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rainfall_regm': SlotDefinition(name='rainfall_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to a given amount of rainfall, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='rainfall regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rainfall regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=272, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000576', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_cond': SlotDefinition(name='root_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Relevant rooting conditions such as field plot size, sowing density, container dimensions, number of plants per container.', alt_descriptions={}, title='rooting conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='http://himedialabs.com/TD/PT158.pdf', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=273, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001061', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_carbon': SlotDefinition(name='root_med_carbon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='carbon source name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Source of organic carbon in the culture rooting medium; e.g. sucrose.', alt_descriptions={}, title='rooting medium carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sucrose', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=274, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000577', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_macronutr': SlotDefinition(name='root_med_macronutr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='macronutrient name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of the culture rooting medium macronutrients (N,P, K, Ca, Mg, S); e.g. KH2PO4 (170¬†mg/L).', alt_descriptions={}, title='rooting medium macronutrients', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='KH2PO4;170¬†milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium macronutrients'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=275, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000578', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_micronutr': SlotDefinition(name='root_med_micronutr', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='micronutrient name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of the culture rooting medium micronutrients (Fe, Mn, Zn, B, Cu, Mo); e.g. H3BO3 (6.2¬†mg/L).', alt_descriptions={}, title='rooting medium micronutrients', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='H3BO3;6.2¬†milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium micronutrients'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=276, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000579', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_ph': SlotDefinition(name='root_med_ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the culture rooting medium; e.g. 5.5.', alt_descriptions={}, title='rooting medium pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=277, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001062', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_regl': SlotDefinition(name='root_med_regl', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='regulator name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Growth regulators in the culture rooting medium such as cytokinins, auxins, gybberellins, abscisic acid; e.g. 0.5¬†mg/L NAA.', alt_descriptions={}, title='rooting medium regulators', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='abscisic acid;0.75 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium regulators'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=278, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000581', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_solid': SlotDefinition(name='root_med_solid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specification of the solidifying agent in the culture rooting medium; e.g. agar.', alt_descriptions={}, title='rooting medium solidifier', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium solidifier'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=279, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001063', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'root_med_suppl': SlotDefinition(name='root_med_suppl', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='supplement name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Organic supplements of the culture rooting medium, such as vitamins, amino acids, organic acids, antibiotics activated charcoal; e.g. nicotinic acid (0.5¬†mg/L).', alt_descriptions={}, title='rooting medium organic supplements', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='nicotinic acid;0.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['rooting medium organic supplements'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=280, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000580', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salt_regm': SlotDefinition(name='salt_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='salt name;salt amount;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving use of salts as supplement to liquid and soil growth media; should include the name of salt, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple salt regimens', alt_descriptions={}, title='salt regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salt regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=281, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000582', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_capt_status': SlotDefinition(name='samp_capt_status', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reason for the sample', alt_descriptions={}, title='sample capture status', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='farm sample', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample capture status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=282, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000860', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_capt_status_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_dis_stage': SlotDefinition(name='samp_dis_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of the disease at the time of sample collection, e.g. inoculation, penetration, infection, growth and reproduction, dissemination of pathogen.', alt_descriptions={}, title='sample disease stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='infection', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample disease stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=283, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000249', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='samp_dis_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_environment': SlotDefinition(name='season_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='seasonal environment name;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Treatment involving an exposure to a particular season (e.g. Winter, summer, rabi, rainy etc.), treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment', alt_descriptions={}, title='seasonal environment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['seasonal environment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=284, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001068', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'standing_water_regm': SlotDefinition(name='standing_water_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='standing water type;treatment interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description=\"Treatment involving an exposure to standing water during a plant's life span, types can be flood water or standing water, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens\", alt_descriptions={}, title='standing water regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['standing water regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=286, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001069', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tiss_cult_growth_med': SlotDefinition(name='tiss_cult_growth_med', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url or free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of plant tissue culture growth media used', alt_descriptions={}, title='tissue culture growth media', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://link.springer.com/content/pdf/10.1007/BF02796489.pdf', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tissue culture growth media'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=287, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001070', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_temp_regm': SlotDefinition(name='water_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to water with varying degree of temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='water temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=288, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000590', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'watering_regm': SlotDefinition(name='watering_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Information about treatment involving an exposure to watering frequencies, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='watering regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None), Example(value='75% water holding capacity; constant', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000591', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:PlantAssociatedInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SedimentInterface': ClassDefinition(name='SedimentInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SedimentInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='sediment dh_interface', alt_descriptions={}, title='Sediment', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkyl_diethers', 'aminopept_act', 'ammonium', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'magnesium', 'mean_frict_vel', 'mean_peak_frict_vel', 'methane', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'particle_class', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'porosity', 'potassium', 'pressure', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'SedimentInterface_sample_link', 'sediment_type', 'silicate', 'size_frac', 'sodium', 'specific_ecosystem', 'sulfate', 'sulfide', 'temp', 'tidal_stage', 'tot_carb', 'tot_depth_water_col', 'tot_nitro_content', 'tot_org_carb', 'turbidity', 'water_content', 'SedimentInterface_alkalinity', 'SedimentInterface_alkyl_diethers', 'SedimentInterface_aminopept_act', 'SedimentInterface_ammonium', 'SedimentInterface_bacteria_carb_prod', 'SedimentInterface_biomass', 'SedimentInterface_bishomohopanol', 'SedimentInterface_bromide', 'SedimentInterface_calcium', 'SedimentInterface_carb_nitro_ratio', 'SedimentInterface_chem_administration', 'SedimentInterface_chloride', 'SedimentInterface_chlorophyll', 'SedimentInterface_collection_date', 'SedimentInterface_density', 'SedimentInterface_depth', 'SedimentInterface_diether_lipids', 'SedimentInterface_diss_carb_dioxide', 'SedimentInterface_diss_hydrogen', 'SedimentInterface_diss_inorg_carb', 'SedimentInterface_diss_org_carb', 'SedimentInterface_diss_org_nitro', 'SedimentInterface_diss_oxygen', 'SedimentInterface_ecosystem', 'SedimentInterface_ecosystem_category', 'SedimentInterface_ecosystem_subtype', 'SedimentInterface_ecosystem_type', 'SedimentInterface_elev', 'SedimentInterface_env_broad_scale', 'SedimentInterface_env_local_scale', 'SedimentInterface_env_medium', 'SedimentInterface_env_package', 'SedimentInterface_experimental_factor', 'SedimentInterface_geo_loc_name', 'SedimentInterface_glucosidase_act', 'SedimentInterface_horizon_meth', 'SedimentInterface_lat_lon', 'SedimentInterface_magnesium', 'SedimentInterface_mean_frict_vel', 'SedimentInterface_mean_peak_frict_vel', 'SedimentInterface_methane', 'SedimentInterface_misc_param', 'SedimentInterface_n_alkanes', 'SedimentInterface_nitrate', 'SedimentInterface_nitrite', 'SedimentInterface_nitro', 'SedimentInterface_org_carb', 'SedimentInterface_org_matter', 'SedimentInterface_org_nitro', 'SedimentInterface_organism_count', 'SedimentInterface_oxy_stat_samp', 'SedimentInterface_part_org_carb', 'SedimentInterface_particle_class', 'SedimentInterface_perturbation', 'SedimentInterface_petroleum_hydrocarb', 'SedimentInterface_ph', 'SedimentInterface_ph_meth', 'SedimentInterface_phaeopigments', 'SedimentInterface_phosphate', 'SedimentInterface_phosplipid_fatt_acid', 'SedimentInterface_porosity', 'SedimentInterface_potassium', 'SedimentInterface_pressure', 'SedimentInterface_redox_potential', 'SedimentInterface_salinity', 'SedimentInterface_samp_collec_device', 'SedimentInterface_samp_collec_method', 'SedimentInterface_samp_mat_process', 'SedimentInterface_samp_size', 'SedimentInterface_samp_store_dur', 'SedimentInterface_samp_store_loc', 'SedimentInterface_samp_store_temp', 'SedimentInterface_sediment_type', 'SedimentInterface_silicate', 'SedimentInterface_size_frac', 'SedimentInterface_sodium', 'SedimentInterface_specific_ecosystem', 'SedimentInterface_sulfate', 'SedimentInterface_sulfide', 'SedimentInterface_temp', 'SedimentInterface_tidal_stage', 'SedimentInterface_tot_carb', 'SedimentInterface_tot_depth_water_col', 'SedimentInterface_tot_nitro_content', 'SedimentInterface_tot_org_carb', 'SedimentInterface_turbidity', 'SedimentInterface_water_content', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'magnesium': SlotDefinition(name='magnesium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter, parts per million, micromole per kilogram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of magnesium in the sample', alt_descriptions={}, title='magnesium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='52.8 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['magnesium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000431', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'methane': SlotDefinition(name='methane', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, parts per billion, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Methane (gas) amount or concentration at the time of sampling', alt_descriptions={}, title='methane', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1800 parts per billion', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['methane'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000101', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'particle_class': SlotDefinition(name='particle_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Particles are classified, based on their size, into six general categories:clay, silt, sand, gravel, cobbles, and boulders; should include amount of particle preceded by the name of the particle type; can include multiple values', alt_descriptions={}, title='particle classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particle classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=32, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000206', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'porosity': SlotDefinition(name='porosity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value or range', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Porosity of deposited sediment is volume of voids divided by the total volume of sample', alt_descriptions={}, title='porosity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['porosity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} - {float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000211', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sediment_type': SlotDefinition(name='sediment_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about the sediment type based on major constituents', alt_descriptions={}, title='sediment type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='biogenous', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sediment type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=42, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001078', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='sediment_type_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tidal_stage': SlotDefinition(name='tidal_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of tide', alt_descriptions={}, title='tidal stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='high tide', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tidal stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000750', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tidal_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_depth_water_col': SlotDefinition(name='tot_depth_water_col', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of total depth of water column', alt_descriptions={}, title='total depth of water column', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total depth of water column'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000634', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SedimentInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SoilInterface': ClassDefinition(name='SoilInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='soil dh_interface', alt_descriptions={}, title='Soil', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin', 'SoilMixsInspiredMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['agrochem_addition', 'air_temp_regm', 'al_sat', 'al_sat_meth', 'ammonium_nitrogen', 'annual_precpt', 'annual_temp', 'biotic_regm', 'biotic_relationship', 'carb_nitro_ratio', 'chem_administration', 'climate_environment', 'collection_date', 'SoilInterface_collection_date_inc', 'SoilInterface_collection_time', 'SoilInterface_collection_time_inc', 'crop_rotation', 'cur_land_use', 'cur_vegetation', 'cur_vegetation_meth', 'depth', 'drainage_class', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'SoilInterface_experimental_factor_other', 'extreme_event', 'fao_class', 'SoilInterface_filter_method', 'fire', 'flooding', 'gaseous_environment', 'geo_loc_name', 'growth_facil', 'heavy_metals', 'heavy_metals_meth', 'horizon_meth', 'humidity_regm', 'SoilInterface_isotope_exposure', 'lat_lon', 'lbc_thirty', 'lbceq', 'light_regm', 'link_class_info', 'link_climate_info', 'local_class', 'local_class_meth', 'manganese', 'SoilInterface_micro_biomass_c_meth', 'micro_biomass_c_meth', 'micro_biomass_meth', 'SoilInterface_micro_biomass_n_meth', 'micro_biomass_n_meth', 'microbial_biomass', 'SoilInterface_microbial_biomass_c', 'microbial_biomass_c', 'SoilInterface_microbial_biomass_n', 'microbial_biomass_n', 'misc_param', 'nitrate_nitrogen', 'nitrite_nitrogen', 'SoilInterface_non_microb_biomass', 'SoilInterface_non_microb_biomass_method', 'org_matter', 'org_nitro', 'SoilInterface_org_nitro_method', 'SoilInterface_other_treatment', 'oxy_stat_samp', 'ph', 'ph_meth', 'phosphate', 'prev_land_use_meth', 'previous_land_use', 'profile_position', 'salinity', 'salinity_meth', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_temp', 'SoilInterface_sample_link', 'season_precpt', 'season_temp', 'sieving', 'size_frac_low', 'size_frac_up', 'slope_aspect', 'slope_gradient', 'soil_horizon', 'soil_text_measure', 'soil_texture_meth', 'soil_type', 'soil_type_meth', 'specific_ecosystem', 'SoilInterface_start_date_inc', 'SoilInterface_start_time_inc', 'store_cond', 'temp', 'tillage', 'tot_carb', 'tot_nitro_cont_meth', 'tot_nitro_content', 'tot_org_c_meth', 'tot_org_carb', 'tot_phosp', 'water_cont_soil_meth', 'water_content', 'watering_regm', 'zinc', 'SoilInterface_agrochem_addition', 'SoilInterface_air_temp_regm', 'SoilInterface_al_sat', 'SoilInterface_al_sat_meth', 'SoilInterface_ammonium_nitrogen', 'SoilInterface_annual_precpt', 'SoilInterface_annual_temp', 'SoilInterface_biotic_regm', 'SoilInterface_biotic_relationship', 'SoilInterface_carb_nitro_ratio', 'SoilInterface_chem_administration', 'SoilInterface_climate_environment', 'SoilInterface_collection_date', 'SoilInterface_crop_rotation', 'SoilInterface_cur_land_use', 'SoilInterface_cur_vegetation', 'SoilInterface_cur_vegetation_meth', 'SoilInterface_depth', 'SoilInterface_drainage_class', 'SoilInterface_ecosystem', 'SoilInterface_ecosystem_category', 'SoilInterface_ecosystem_subtype', 'SoilInterface_ecosystem_type', 'SoilInterface_elev', 'SoilInterface_env_broad_scale', 'SoilInterface_env_local_scale', 'SoilInterface_env_medium', 'SoilInterface_env_package', 'SoilInterface_experimental_factor', 'SoilInterface_extreme_event', 'SoilInterface_fao_class', 'SoilInterface_fire', 'SoilInterface_flooding', 'SoilInterface_gaseous_environment', 'SoilInterface_geo_loc_name', 'SoilInterface_growth_facil', 'SoilInterface_heavy_metals', 'SoilInterface_heavy_metals_meth', 'SoilInterface_horizon_meth', 'SoilInterface_humidity_regm', 'SoilInterface_lat_lon', 'SoilInterface_lbc_thirty', 'SoilInterface_lbceq', 'SoilInterface_light_regm', 'SoilInterface_link_class_info', 'SoilInterface_link_climate_info', 'SoilInterface_local_class', 'SoilInterface_local_class_meth', 'SoilInterface_manganese', 'SoilInterface_micro_biomass_meth', 'SoilInterface_microbial_biomass', 'SoilInterface_misc_param', 'SoilInterface_nitrate_nitrogen', 'SoilInterface_nitrite_nitrogen', 'SoilInterface_org_matter', 'SoilInterface_org_nitro', 'SoilInterface_oxy_stat_samp', 'SoilInterface_ph', 'SoilInterface_ph_meth', 'SoilInterface_phosphate', 'SoilInterface_prev_land_use_meth', 'SoilInterface_previous_land_use', 'SoilInterface_profile_position', 'SoilInterface_salinity', 'SoilInterface_salinity_meth', 'SoilInterface_samp_collec_device', 'SoilInterface_samp_collec_method', 'SoilInterface_samp_mat_process', 'SoilInterface_samp_size', 'SoilInterface_samp_store_temp', 'SoilInterface_season_precpt', 'SoilInterface_season_temp', 'SoilInterface_sieving', 'SoilInterface_size_frac_low', 'SoilInterface_size_frac_up', 'SoilInterface_slope_aspect', 'SoilInterface_slope_gradient', 'SoilInterface_soil_horizon', 'SoilInterface_soil_text_measure', 'SoilInterface_soil_texture_meth', 'SoilInterface_soil_type', 'SoilInterface_soil_type_meth', 'SoilInterface_specific_ecosystem', 'SoilInterface_store_cond', 'SoilInterface_temp', 'SoilInterface_tillage', 'SoilInterface_tot_carb', 'SoilInterface_tot_nitro_cont_meth', 'SoilInterface_tot_nitro_content', 'SoilInterface_tot_org_c_meth', 'SoilInterface_tot_org_carb', 'SoilInterface_tot_phosp', 'SoilInterface_water_cont_soil_meth', 'SoilInterface_water_content', 'SoilInterface_watering_regm', 'SoilInterface_zinc', 'SoilInterface_organism_count', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'agrochem_addition': SlotDefinition(name='agrochem_addition', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='agrochemical name;agrochemical amount;timestamp', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Addition of fertilizers, pesticides, etc. - amount and time of applications', alt_descriptions={}, title='history/agrochemical additions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='roundup;5 milligram per liter;2018-06-21', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/agrochemical additions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000639', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='.*', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'air_temp_regm': SlotDefinition(name='air_temp_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='temperature value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying temperatures; should include the temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include different temperature regimens', alt_descriptions={}, title='air temperature regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['air temperature regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000551', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'al_sat': SlotDefinition(name='al_sat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The relative abundance of aluminum in the sample', alt_descriptions={}, title='aluminum saturation/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\"], notes=[], comments=['Aluminum saturation is the percentage of the CEC occupies by aluminum. Like all cations, aluminum held by the cation exchange complex is in equilibrium with aluminum in the soil solution.'], examples=[Example(value='0.27', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000607', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'al_sat_meth': SlotDefinition(name='al_sat_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining Aluminum saturation', alt_descriptions={}, title='aluminum saturation method/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts?\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts?\"], notes=[], comments=['Required when aluminum saturation is provided.'], examples=[Example(value='https://doi.org/10.1371/journal.pone.0176357', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000324', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium_nitrogen': SlotDefinition(name='ammonium_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium nitrogen in the sample', alt_descriptions={}, title='ammonium nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.3 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium_nitrogen', 'NH4-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1005, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'annual_precpt': SlotDefinition(name='annual_precpt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The average of all annual precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.', alt_descriptions={}, title='mean annual precipitation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC, added example. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC, added example. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=[], examples=[Example(value='8.94 inch', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000644', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'annual_temp': SlotDefinition(name='annual_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Mean annual temperature', alt_descriptions={}, title='mean annual temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='12.5 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean annual temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000642', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_regm': SlotDefinition(name='biotic_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving use of biotic factors, such as bacteria, viruses or fungi.', alt_descriptions={}, title='biotic regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='sample inoculated with Rhizobium spp. Culture', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biotic regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001038', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biotic_relationship': SlotDefinition(name='biotic_relationship', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={})}, description='Description of relationship(s) between the subject organism and other organism(s) it is associated with. E.g., parasite on species X; mutualist with species Y. The target organism is the subject of the relationship, and the other organism(s) is the object', alt_descriptions={}, title='observed biotic relationship', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='free living', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['observed biotic relationship'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000028', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='biotic_relationship_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'climate_environment': SlotDefinition(name='climate_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Treatment involving an exposure to a particular climate; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple climates', alt_descriptions={}, title='climate environment', deprecated=None, todos=['description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.', 'description says \"can include multiple climates\" but multivalued is set to false', 'add examples, i need to see some examples to add correctly formatted example.'], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0001040', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date_inc': SlotDefinition(name='collection_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time': SlotDefinition(name='collection_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The time of sampling, either as an instance (single point) or interval.', alt_descriptions={}, title='collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time_inc': SlotDefinition(name='collection_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'crop_rotation': SlotDefinition(name='crop_rotation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='crop rotation status;schedule', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Whether or not crop is rotated, and if yes, rotation schedule', alt_descriptions={}, title='history/crop rotation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='yes;R2/2017-01-01/2018-12-31/P6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/crop rotation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{boolean};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000318', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_land_use': SlotDefinition(name='cur_land_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Present state of sample site', alt_descriptions={}, title='current land use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='conifers', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['current land use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001080', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='cur_land_use_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_vegetation': SlotDefinition(name='cur_vegetation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Vegetation classification from one or more standard classification systems, or agricultural crop', alt_descriptions={}, title='current vegetation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Recommend changing this from text value to some king of ontology?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Recommend changing this from text value to some kind of ontology?'], notes=[], comments=['Values provided here can be specific species of vegetation or vegetation regions', 'See for vegetation regions- https://education.nationalgeographic.org/resource/vegetation-region'], examples=[Example(value='deciduous forest', description=None, object=None), Example(value='forest', description=None, object=None), Example(value='Bauhinia variegata', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000312', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'cur_vegetation_meth': SlotDefinition(name='cur_vegetation_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in vegetation classification', alt_descriptions={}, title='current vegetation method', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I'm not sure this is a DOI, PMID, or URI. Should pool the community and find out how they accomplish this if provided.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', \"I'm not sure this is a DOI, PMID, or URI. Should pool the community and find out how they accomplish this if provided.\"], notes=[], comments=['Required when current vegetation is provided.'], examples=[Example(value='https://doi.org/10.1111/j.1654-109X.2011.01154.x', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000314', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'drainage_class': SlotDefinition(name='drainage_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Drainage classification from a standard system such as the USDA system', alt_descriptions={}, title='drainage classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='well', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['drainage classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001085', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='drainage_class_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemCategoryEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemSubtypeEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EcosystemTypeEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvBroadScaleSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvLocalScaleSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='EnvMediumSoilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor_other': SlotDefinition(name='experimental_factor_other', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Other details about your sample that you feel can't be accurately represented in the available columns.\", alt_descriptions={}, title='experimental factor- other', deprecated=None, todos=[], notes=[], comments=['This slot accepts open-ended text about your sample.', 'We recommend using key:value pairs.', 'Provided pairs will be considered for inclusion as future slots/terms in this data collection template.'], examples=[Example(value='experimental treatment: value', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:experimental_factor|additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extreme_event': SlotDefinition(name='extreme_event', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date, string', extensions={}, annotations={})}, description='Unusual physical events that may have affected microbial populations', alt_descriptions={}, title='history/extreme events', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=[], examples=[Example(value='1980-05-18, volcanic eruption', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000320', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fao_class': SlotDefinition(name='fao_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Soil classification from the FAO World Reference Database for Soil Resources. The list can be found at http://www.fao.org/nr/land/sols/soil/wrb-soil-maps/reference-groups', alt_descriptions={}, title='soil_taxonomic/FAO classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Luvisols', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/FAO classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001083', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='fao_class_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_method': SlotDefinition(name='filter_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of filter used or how the sample was filtered', alt_descriptions={}, title='filter method', deprecated=None, todos=[], notes=[], comments=['describe the filter or provide a catalog number and manufacturer'], examples=[Example(value='C18', description=None, object=None), Example(value='Basix PES, 13-100-106 FisherSci', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:filter_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fire': SlotDefinition(name='fire', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date string', extensions={}, annotations={})}, description='Historical and/or physical evidence of fire', alt_descriptions={}, title='history/fire', deprecated=None, todos=['is \"to\" acceptable? Is there a better way to request that be written?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'is \"to\" acceptable? Is there a better way to request that be written?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Provide the date the fire occurred. If extended burning occurred provide the date range.'], examples=[Example(value='1871-10-10', description=None, object=None), Example(value='1871-10-01 to 1871-10-31', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001086', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?(\\\\s+to\\\\s+[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'flooding': SlotDefinition(name='flooding', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date string', extensions={}, annotations={})}, description='Historical and/or physical evidence of flooding', alt_descriptions={}, title='history/flooding', deprecated=None, todos=['is \"to\" acceptable? Is there a better way to request that be written?', 'What about if the \"day\" isn\\'t known? Is this ok?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'is \"to\" acceptable? Is there a better way to request that be written?', 'What about if the \"day\" isn\\'t known? Is this ok?', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Provide the date the flood occurred. If extended flooding occurred provide the date range.'], examples=[Example(value='1927-04-15', description=None, object=None), Example(value='1927-04 to 1927-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000319', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_environment': SlotDefinition(name='gaseous_environment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Use of conditions with differing gaseous environments; should include the name of gaseous compound, amount administered, treatment duration, interval and total experimental duration; can include multiple gaseous environment regimens', alt_descriptions={}, title='gaseous environment', deprecated=None, todos=[\"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\", \"would like to see usage examples for this slot. Requiring micromole/L seems too limiting and doesn't match expected_value value\", \"did I do this right? keep the example that's provided and add another? so as to not override\"], notes=[], comments=[], examples=[Example(value='CO2; 500ppm above ambient; constant', description=None, object=None), Example(value='nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000558', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'growth_facil': SlotDefinition(name='growth_facil', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='free text or CO', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of facility/location where the sample was harvested; controlled vocabulary: growth chamber, open top chamber, glasshouse, experimental garden, field.', alt_descriptions={}, title='growth facility', deprecated=None, todos=[], notes=['Removed from description: Alternatively use Crop Ontology (CO) terms'], comments=[], examples=[Example(value='Growth chamber [CO_715:0000189]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['growth facility'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}|{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0001043', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='GrowthFacilEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heavy_metals': SlotDefinition(name='heavy_metals', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Heavy metals present in the sample and their concentrations.', alt_descriptions={}, title='heavy metals/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\", 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'Example & validation. Can we make rules that 27% & 27 % & 0.27 will validate?', \"I think it's weird the way GSC writes the title. I recommend this change. Thoughts? I would argue this isn't an extreme unusual property. It's just a biogeochemical measurement.\"], notes=[\"Changed to multi-valued. In MIxS, you add another column to denote multiple heavy metals. We don't have that ability in the submission portal.\", \"Changed to multi-valued. In MIxS, you add another column to denote multiple heavy metals. We don't have that ability in the submission portal.\"], comments=['For multiple heavy metals and concentrations, separate by ;'], examples=[Example(value='mercury 0.09 micrograms per gram', description=None, object=None), Example(value='mercury 0.09 ug/g; chromium 0.03 ug/g', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000652', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'heavy_metals_meth': SlotDefinition(name='heavy_metals_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining heavy metals', alt_descriptions={}, title='heavy metals method/ extreme unusual properties', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Required when heavy metals are provided', 'If different methods are used for multiple metals, indicate the metal and method. Separate metals by ;'], examples=[Example(value='https://doi.org/10.3390/ijms9040434', description=None, object=None), Example(value='mercury https://doi.org/10.1007/BF01056090; chromium https://doi.org/10.1007/s00216-006-0322-8', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000343', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='soil horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'humidity_regm': SlotDefinition(name='humidity_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='humidity value;treatment interval and duration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Information about treatment involving an exposure to varying degree of humidity; information about treatment involving use of growth hormones; should include amount of humidity administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='humidity regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['humidity regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000568', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'isotope_exposure': SlotDefinition(name='isotope_exposure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='List isotope exposure or addition applied to your sample.', alt_descriptions={}, title='isotope exposure/addition', deprecated=None, todos=['Can we make the H218O correctly super and subscripted?'], notes=[], comments=['This is required when your experimental design includes the use of isotopically labeled compounds'], examples=[Example(value='13C glucose', description=None, object=None), Example(value='H218O', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:chem_administration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}; {timestamp}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]; ([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lbc_thirty': SlotDefinition(name='lbc_thirty', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ppm CaCO3/pH', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='lime buffer capacity, determined after 30 minute incubation', alt_descriptions={}, title='lime buffer capacity (at 30 minutes)', deprecated=None, todos=[], notes=[], comments=['This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit'], examples=[Example(value='543 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0', 'https://secure.caes.uga.edu/extension/publications/files/pdf/C%20874_5.PDF'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lbc_thirty', 'lbc30', 'lime buffer capacity (at 30 minutes)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1001, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lbceq': SlotDefinition(name='lbceq', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ppm CaCO3/pH', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='lime buffer capacity, determined at equilibrium after 5 day incubation', alt_descriptions={}, title='lime buffer capacity (after 5 day incubation)', deprecated=None, todos=[], notes=[], comments=['This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit'], examples=[Example(value='1575 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['lbceq', 'lime buffer capacity (at 5-day equilibrium)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1002, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_regm': SlotDefinition(name='light_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='exposure type;light intensity;light quality', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux; micrometer, nanometer, angstrom', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Information about treatment(s) involving exposure to light, including both light intensity and quality.', alt_descriptions={}, title='light regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='incandescant light;10 lux;450 nanometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light regimen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000569', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'link_class_info': SlotDefinition(name='link_class_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Link to digitized soil maps or other soil classification information', alt_descriptions={}, title='link to classification information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['link to classification information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000329', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'link_climate_info': SlotDefinition(name='link_climate_info', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Link to climate resource', alt_descriptions={}, title='link to climate information', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['link to climate information'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000328', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_class': SlotDefinition(name='local_class', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='local classification name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Soil classification based on local soil classification system', alt_descriptions={}, title='soil_taxonomic/local classification', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/local classification'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000330', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_class_meth': SlotDefinition(name='local_class_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the local soil classification', alt_descriptions={}, title='soil_taxonomic/local classification method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil_taxonomic/local classification method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=24, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000331', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'manganese': SlotDefinition(name='manganese', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg (ppm)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of manganese in the sample', alt_descriptions={}, title='manganese', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='24.7 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['manganese'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1003, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_c_meth': SlotDefinition(name='micro_biomass_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass carbon', alt_descriptions={}, title='microbial biomass carbon method', deprecated=None, todos=['How should we separate values? | or ;? lets be consistent'], notes=[], comments=['required if \"microbial_biomass_c\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_meth': SlotDefinition(name='micro_biomass_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining microbial biomass', alt_descriptions={}, title='microbial biomass method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['microbial biomass method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000339', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_n_meth': SlotDefinition(name='micro_biomass_n_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass nitrogen', alt_descriptions={}, title='microbial biomass nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"microbial_biomass_n\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass': SlotDefinition(name='microbial_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram per kilogram soil', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer. If you keep this, you would need to have correction factors used for conversion to the final units', alt_descriptions={}, title='microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['microbial biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=42, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000650', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_c': SlotDefinition(name='microbial_biomass_c', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass carbon', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug C/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_n': SlotDefinition(name='microbial_biomass_n', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass nitrogen', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug N/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate_nitrogen': SlotDefinition(name='nitrate_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate nitrogen in the sample', alt_descriptions={}, title='nitrate_nitrogen', deprecated=None, todos=[], notes=[], comments=['often below some specified limit of detection'], examples=[Example(value='0.29 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate_nitrogen', 'NO3-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1006, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite_nitrogen': SlotDefinition(name='nitrite_nitrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite nitrogen in the sample', alt_descriptions={}, title='nitrite_nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.2 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite_nitrogen', 'NO2-N'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1007, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass': SlotDefinition(name='non_microb_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Amount of biomass; should include the name for the part of biomass measured, e.g.insect, plant, total. Can include multiple measurements separated by ;', alt_descriptions={}, title='non-microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='insect 0.23 ug; plant 1g', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:biomass|microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass_method': SlotDefinition(name='non_microb_biomass_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining biomass', alt_descriptions={}, title='non-microbial biomass method', deprecated=None, todos=[], notes=[], comments=['required if \"non-microbial biomass\" is provided'], examples=[Example(value='https://doi.org/10.1038/s41467-021-26181-3', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro_method': SlotDefinition(name='org_nitro_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Method used for obtaining organic nitrogen', alt_descriptions={}, title='organic nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"org_nitro\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(85)90144-0', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:org_nitro|tot_nitro_cont_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'other_treatment': SlotDefinition(name='other_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Other treatments applied to your samples that are not applicable to the provided fields', alt_descriptions={}, title='other treatments', deprecated=None, todos=[], notes=[], comments=['This is an open text field to provide any treatments that cannot be captured in the provided slots.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prev_land_use_meth': SlotDefinition(name='prev_land_use_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining previous land use and dates', alt_descriptions={}, title='history/previous land use method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/previous land use method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000316', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'previous_land_use': SlotDefinition(name='previous_land_use', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='land use name;date', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Previous land use and dates', alt_descriptions={}, title='history/previous land use', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/previous land use'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000315', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+;([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'profile_position': SlotDefinition(name='profile_position', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Cross-sectional position in the hillslope where sample was collected.sample area position in relation to surrounding areas', alt_descriptions={}, title='profile position', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='summit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['profile position'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001084', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='profile_position_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity_meth': SlotDefinition(name='salinity_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining salinity', alt_descriptions={}, title='salinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.1007/978-1-61779-986-0_28', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=55, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000341', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_precpt': SlotDefinition(name='season_precpt', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The average of all seasonal precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.', alt_descriptions={}, title='average seasonal precipitation', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'check validation & examples. always mm? so value only? Or value + unit', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'check validation & examples. always mm? so value only? Or value + unit'], notes=['mean and average are the same thing, but it seems like bad practice to not be consistent. Changed mean to average', 'mean and average are the same thing, but it seems like bad practice to not be consistent. Changed mean to average'], comments=['Seasons are defined as spring (March, April, May), summer (June, July, August), autumn (September, October, November) and winter (December, January, February).'], examples=[Example(value='0.4 inch', description=None, object=None), Example(value='10.16 mm', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000645', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'season_temp': SlotDefinition(name='season_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Mean seasonal temperature', alt_descriptions={}, title='mean seasonal temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='18 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean seasonal temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000643', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sieving': SlotDefinition(name='sieving', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Collection design of pooled samples and/or sieve size and amount of sample sieved', alt_descriptions={}, title='composite design/sieving', deprecated=None, todos=['check validation and examples', 'check validation and examples'], notes=[], comments=['Describe how samples were composited or sieved.', \"Use 'sample link' to indicate which samples were combined.\"], examples=[Example(value='combined 2 cores', description=None, object=None), Example(value='4mm sieved', description=None, object=None), Example(value='4 mm sieved and homogenized', description=None, object=None), Example(value='50 g', description=None, object=None), Example(value='5 cores', description=None, object=None), Example(value='2 mm sieved', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{{text}|{float} {unit}};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000322', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_low': SlotDefinition(name='size_frac_low', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction lower threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction lower threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000735', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_up': SlotDefinition(name='size_frac_up', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction upper threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction upper threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000736', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slope_aspect': SlotDefinition(name='slope_aspect', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The direction a slope faces. While looking down a slope use a compass to record the direction you are facing (direction or degrees). - This measure provides an indication of sun and wind exposure that will influence soil temperature and evapotranspiration.', alt_descriptions={}, title='slope aspect', deprecated=None, todos=['This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot'], notes=[], comments=['Aspect is the orientation of slope, measured clockwise in degrees from 0 to 360, where 0 is north-facing, 90 is east-facing, 180 is south-facing, and 270 is west-facing.'], examples=[Example(value='35', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000647', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slope_gradient': SlotDefinition(name='slope_gradient', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Commonly called 'slope'. The angle between ground surface and a horizontal line (in percent). This is the direction that overland water would flow. This measure is usually taken with a hand level meter or clinometer\", alt_descriptions={}, title='slope gradient', deprecated=None, todos=['Slope is a percent. How does the validation work? Check to correct examples', 'Slope is a percent. How does the validation work? Check to correct examples'], notes=[], comments=[], examples=[Example(value='10%', description=None, object=None), Example(value='10 %', description=None, object=None), Example(value='0.1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000646', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_horizon': SlotDefinition(name='soil_horizon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Specific layer in the land area which measures parallel to the soil surface and possesses physical characteristics which differ from the layers above and beneath', alt_descriptions={}, title='soil horizon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='A horizon', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=32, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001082', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='soil_horizon_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_text_measure': SlotDefinition(name='soil_text_measure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The relative proportion of different grain sizes of mineral particles in a soil, as described using a standard system; express as % sand (50 um to 2 mm), silt (2 um to 50 um), and clay (<2 um) with textural name (e.g., silty clay loam) optional.', alt_descriptions={}, title='soil texture measurement', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil texture measurement'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000335', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_texture_meth': SlotDefinition(name='soil_texture_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining soil texture', alt_descriptions={}, title='soil texture method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil texture method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000336', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_type': SlotDefinition(name='soil_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='ENVO_00001998', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Description of the soil type or classification. This field accepts terms under soil (http://purl.obolibrary.org/obo/ENVO_00001998). Multiple terms can be separated by pipes.', alt_descriptions={}, title='soil type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='plinthosol [ENVO:00002250]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000332', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soil_type_meth': SlotDefinition(name='soil_type_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining soil series name or other lower-level classification', alt_descriptions={}, title='soil type method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil type method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000334', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='SpecificEcosystemEnum', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_date_inc': SlotDefinition(name='start_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_time_inc': SlotDefinition(name='start_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'store_cond': SlotDefinition(name='store_cond', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='storage condition type;duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Explain how the soil sample is stored (fresh/frozen/other).', alt_descriptions={}, title='storage conditions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-20 degree Celsius freezer;P2Y10D', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['storage conditions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000327', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='StoreCondEnum', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tillage': SlotDefinition(name='tillage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Note method(s) used for tilling', alt_descriptions={}, title='history/tillage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='chisel', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['history/tillage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001081', multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tillage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_carb': SlotDefinition(name='tot_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total carbon content', alt_descriptions={}, title='total carbon', deprecated=None, todos=['is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\", 'is this inorganic and organic? both? could use some clarification.', \"ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format\"], notes=[], comments=[], examples=[Example(value='1 ug/L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000525', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_cont_meth': SlotDefinition(name='tot_nitro_cont_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining the total nitrogen', alt_descriptions={}, title='total nitrogen content method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.2134/agronmonogr9.2.c32', description=None, object=None), Example(value='https://acsess.onlinelibrary.wiley.com/doi/full/10.2136/sssaj2009.0389?casa_token=bm0pYIUdNMgAAAAA%3AOWVRR0STHaOe-afTcTdxn5m1hM8n2ltM0wY-b1iYpYdD9dhwppk5j3LvC2IO5yhOIvyLVeQz4NZRCZo', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=49, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000338', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro_content': SlotDefinition(name='tot_nitro_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Total nitrogen content of the sample', alt_descriptions={}, title='total nitrogen content', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=48, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000530', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_c_meth': SlotDefinition(name='tot_org_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining total organic carbon', alt_descriptions={}, title='total organic carbon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://doi.org/10.1080/07352680902776556', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000337', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_org_carb': SlotDefinition(name='tot_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content', alt_descriptions={}, title='total organic carbon', deprecated=None, todos=['check description. How are they different?', 'check description. How are they different?'], notes=[], comments=[], examples=[Example(value='5 mg N/ L', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=50, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000533', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosp': SlotDefinition(name='tot_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus', alt_descriptions={}, title='total phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.03 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=52, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000117', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_cont_soil_meth': SlotDefinition(name='water_cont_soil_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining the water content of soil', alt_descriptions={}, title='water content method', deprecated=None, todos=['Why is it soil water content method in the name but not the title? Is this slot used in other samples?', 'Soil water content can be measure MANY ways and often, multiple ways are used in one experiment (gravimetric water content and water holding capacity and water filled pore space, to name a few).', 'Should this be multi valued? How to we manage and validate this?', 'Why is it soil water content method in the name but not the title? Is this slot used in other samples?', 'Soil water content can be measure MANY ways and often, multiple ways are used in one experiment (gravimetric water content and water holding capacity and water filled pore space, to name a few).', 'Should this be multi valued? How to we manage and validate this?'], notes=[], comments=['Required if providing water content'], examples=[Example(value='J. Nat. Prod. Plant Resour., 2012, 2 (4):500-503', description=None, object=None), Example(value='https://dec.alaska.gov/applications/spar/webcalc/definitions.htm', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000323', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_content': SlotDefinition(name='water_content', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='string', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per gram or cubic centimeter per cubic centimeter', extensions={}, annotations={})}, description='Water content measurement', alt_descriptions={}, title='water content', deprecated=None, todos=['value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?', 'value in preferred unit is too limiting. need to change this', 'check and correct validation so examples are accepted', 'This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot', 'how to manage multiple water content methods?'], notes=[], comments=[], examples=[Example(value='75%', description=None, object=None), Example(value='75 %', description=None, object=None), Example(value='0.75 g water/g dry soil', description=None, object=None), Example(value='75% water holding capacity', description=None, object=None), Example(value='1.1 g fresh weight/ dry weight', description=None, object=None), Example(value='10% water filled pore space', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float or pct} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000185', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?%? \\\\S.+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'watering_regm': SlotDefinition(name='watering_regm', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Information about treatment involving an exposure to watering frequencies, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens', alt_descriptions={}, title='watering regimen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M', description=None, object=None), Example(value='75% water holding capacity; constant', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000591', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'zinc': SlotDefinition(name='zinc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mg/kg (ppm)', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of zinc in the sample', alt_descriptions={}, title='zinc', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 mg/kg', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://www.ornl.gov/content/bio-scales-0'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['zinc'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other)\\\\|)*(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SoilInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'WastewaterSludgeInterface': ClassDefinition(name='WastewaterSludgeInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WastewaterSludgeInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='wastewater_sludge dh_interface', alt_descriptions={}, title='Wastewater Sludge', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'biochem_oxygen_dem', 'chem_administration', 'chem_oxygen_dem', 'collection_date', 'depth', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'efficiency_percent', 'elev', 'emulsions', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'gaseous_substances', 'geo_loc_name', 'horizon_meth', 'indust_eff_percent', 'inorg_particles', 'lat_lon', 'misc_param', 'nitrate', 'org_particles', 'organism_count', 'oxy_stat_samp', 'perturbation', 'ph', 'ph_meth', 'phosphate', 'pre_treatment', 'primary_treatment', 'reactor_type', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'WastewaterSludgeInterface_sample_link', 'secondary_treatment', 'sewage_type', 'size_frac', 'sludge_retent_time', 'sodium', 'soluble_inorg_mat', 'soluble_org_mat', 'specific_ecosystem', 'suspend_solids', 'temp', 'tertiary_treatment', 'tot_nitro', 'tot_phosphate', 'wastewater_type', 'WastewaterSludgeInterface_alkalinity', 'WastewaterSludgeInterface_biochem_oxygen_dem', 'WastewaterSludgeInterface_chem_administration', 'WastewaterSludgeInterface_chem_oxygen_dem', 'WastewaterSludgeInterface_collection_date', 'WastewaterSludgeInterface_depth', 'WastewaterSludgeInterface_ecosystem', 'WastewaterSludgeInterface_ecosystem_category', 'WastewaterSludgeInterface_ecosystem_subtype', 'WastewaterSludgeInterface_ecosystem_type', 'WastewaterSludgeInterface_efficiency_percent', 'WastewaterSludgeInterface_elev', 'WastewaterSludgeInterface_emulsions', 'WastewaterSludgeInterface_env_broad_scale', 'WastewaterSludgeInterface_env_local_scale', 'WastewaterSludgeInterface_env_medium', 'WastewaterSludgeInterface_env_package', 'WastewaterSludgeInterface_experimental_factor', 'WastewaterSludgeInterface_gaseous_substances', 'WastewaterSludgeInterface_geo_loc_name', 'WastewaterSludgeInterface_horizon_meth', 'WastewaterSludgeInterface_indust_eff_percent', 'WastewaterSludgeInterface_inorg_particles', 'WastewaterSludgeInterface_lat_lon', 'WastewaterSludgeInterface_misc_param', 'WastewaterSludgeInterface_nitrate', 'WastewaterSludgeInterface_org_particles', 'WastewaterSludgeInterface_organism_count', 'WastewaterSludgeInterface_oxy_stat_samp', 'WastewaterSludgeInterface_perturbation', 'WastewaterSludgeInterface_ph', 'WastewaterSludgeInterface_ph_meth', 'WastewaterSludgeInterface_phosphate', 'WastewaterSludgeInterface_pre_treatment', 'WastewaterSludgeInterface_primary_treatment', 'WastewaterSludgeInterface_reactor_type', 'WastewaterSludgeInterface_salinity', 'WastewaterSludgeInterface_samp_collec_device', 'WastewaterSludgeInterface_samp_collec_method', 'WastewaterSludgeInterface_samp_mat_process', 'WastewaterSludgeInterface_samp_size', 'WastewaterSludgeInterface_samp_store_dur', 'WastewaterSludgeInterface_samp_store_loc', 'WastewaterSludgeInterface_samp_store_temp', 'WastewaterSludgeInterface_secondary_treatment', 'WastewaterSludgeInterface_sewage_type', 'WastewaterSludgeInterface_size_frac', 'WastewaterSludgeInterface_sludge_retent_time', 'WastewaterSludgeInterface_sodium', 'WastewaterSludgeInterface_soluble_inorg_mat', 'WastewaterSludgeInterface_soluble_org_mat', 'WastewaterSludgeInterface_specific_ecosystem', 'WastewaterSludgeInterface_suspend_solids', 'WastewaterSludgeInterface_temp', 'WastewaterSludgeInterface_tertiary_treatment', 'WastewaterSludgeInterface_tot_nitro', 'WastewaterSludgeInterface_tot_phosphate', 'WastewaterSludgeInterface_wastewater_type', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biochem_oxygen_dem': SlotDefinition(name='biochem_oxygen_dem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Amount of dissolved oxygen needed by aerobic biological organisms in a body of water to break down organic material present in a given water sample at certain temperature over a specific time period', alt_descriptions={}, title='biochemical oxygen demand', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biochemical oxygen demand'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=296, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000653', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_oxygen_dem': SlotDefinition(name='chem_oxygen_dem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='A measure of the capacity of water to consume oxygen during the decomposition of organic matter and the oxidation of inorganic chemicals such as ammonia and nitrite', alt_descriptions={}, title='chemical oxygen demand', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical oxygen demand'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=301, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000656', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.'], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemCategoryEnum range?'], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemSubtypeEnum range?'], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or EcosystemTypeEnum range?'], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'efficiency_percent': SlotDefinition(name='efficiency_percent', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Percentage of volatile solids removed from the anaerobic digestor', alt_descriptions={}, title='efficiency percent', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['efficiency percent'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=307, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000657', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='225', description=None, object=None), Example(value='0', description=None, object=None), Example(value='1250', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emulsions': SlotDefinition(name='emulsions', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='emulsion name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount or concentration of substances such as paints, adhesives, mayonnaise, hair colorants, emulsified oils, etc.; can include multiple emulsion types', alt_descriptions={}, title='emulsions', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['emulsions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=308, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000660', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO's biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]|termLabel [termID]|termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html\", alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='canopy [ENVO:00000047]', description=None, object=None), Example(value='herb and fern layer [ENVO:01000337]', description=None, object=None), Example(value='litter layer [ENVO:01000338]', description=None, object=None), Example(value='understory [01000335]', description=None, object=None), Example(value='shrub layer [ENVO:01000336]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=['range changed to enumeration late in makefile, so this is modified (but \"sample ID\" anyway)'], comments=[], examples=[Example(value='soil [ENVO:00001998]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:EFO_0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'gaseous_substances': SlotDefinition(name='gaseous_substances', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='gaseous substance name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount or concentration of substances such as hydrogen sulfide, carbon dioxide, methane, etc.; can include multiple substances', alt_descriptions={}, title='gaseous substances', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['gaseous substances'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=311, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000661', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}: {text}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'indust_eff_percent': SlotDefinition(name='indust_eff_percent', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Percentage of industrial effluents received by wastewater treatment plant', alt_descriptions={}, title='industrial effluent percent', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['industrial effluent percent'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=332, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000662', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inorg_particles': SlotDefinition(name='inorg_particles', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='inorganic particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of particles such as sand, grit, metal particles, ceramics, etc.; can include multiple particles', alt_descriptions={}, title='inorganic particles', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inorganic particles'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=333, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000664', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?', \"This is currently a required field but it's not clear if this should be required for human hosts\"], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{lat lon}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?([1-8]?\\\\d(\\\\.\\\\d+)?|90(\\\\.0+)?)\\\\s[-+]?(180(\\\\.0+)?|((1[0-7]\\\\d)|([1-9]?\\\\d))(\\\\.\\\\d+)?)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_particles': SlotDefinition(name='org_particles', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='particle name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of particles such as faeces, hairs, food, vomit, paper fibers, plant material, humus, etc.', alt_descriptions={}, title='organic particles', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic particles'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=338, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000665', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*\\\\|)*([-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=['Use modified term'], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}', singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=0, maximum_value=14, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pre_treatment': SlotDefinition(name='pre_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='pre-treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process of pre-treatment removes materials that can be easily collected from the raw wastewater', alt_descriptions={}, title='pre-treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pre-treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=342, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000348', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'primary_treatment': SlotDefinition(name='primary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='primary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process to produce both a generally homogeneous liquid capable of being treated biologically and a sludge that can be separately treated or processed', alt_descriptions={}, title='primary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=343, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000349', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reactor_type': SlotDefinition(name='reactor_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='reactor type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Anaerobic digesters can be designed and engineered to operate using a number of different process configurations, as batch or continuous, mesophilic, high solid or low solid, and single stage or multistage', alt_descriptions={}, title='reactor type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reactor type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=346, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000350', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=['Report dimensions and details when applicable'], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=['This can be a citation or description'], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=['This refers to the TOTAL amount of sample collected from the experiment. NOT the amount sent to each institution or collected for a specific analysis.'], examples=[Example(value='5 grams', description=None, object=None), Example(value='10 mL', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which the sample was stored (degrees are assumed)', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'secondary_treatment': SlotDefinition(name='secondary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='secondary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process for substantially degrading the biological content of the sewage', alt_descriptions={}, title='secondary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['secondary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=360, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000351', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sewage_type': SlotDefinition(name='sewage_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='sewage type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Type of wastewater treatment plant as municipial or industrial', alt_descriptions={}, title='sewage type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sewage type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=361, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000215', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sludge_retent_time': SlotDefinition(name='sludge_retent_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='hours', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The time activated sludge remains in reactor', alt_descriptions={}, title='sludge retention time', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sludge retention time'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=362, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000669', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_inorg_mat': SlotDefinition(name='soluble_inorg_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='soluble inorganic material name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances such as ammonia, road-salt, sea-salt, cyanide, hydrogen sulfide, thiocyanates, thiosulfates, etc.', alt_descriptions={}, title='soluble inorganic material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble inorganic material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=364, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000672', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_org_mat': SlotDefinition(name='soluble_org_mat', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='soluble organic material name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, mole per liter, gram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances such as urea, fruit sugars, soluble proteins, drugs, pharmaceuticals, etc.', alt_descriptions={}, title='soluble organic material', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble organic material'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=365, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000673', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string or SpecificEcosystemEnum range?'], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_solids': SlotDefinition(name='suspend_solids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='suspended solid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram, microgram, milligram per liter, mole per liter, gram per liter, part per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances', alt_descriptions={}, title='suspended solids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended solids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=372, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000150', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tertiary_treatment': SlotDefinition(name='tertiary_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='tertiary treatment type', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The process providing a final treatment stage to raise the effluent quality before it is discharged to the receiving environment', alt_descriptions={}, title='tertiary treatment', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tertiary treatment'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=374, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000352', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_phosphate': SlotDefinition(name='tot_phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total amount or concentration of phosphate', alt_descriptions={}, title='total phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=378, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000689', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'wastewater_type': SlotDefinition(name='wastewater_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='wastewater type name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The origin of wastewater such as human waste, rainfall, storm drains, etc.', alt_descriptions={}, title='wastewater type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['wastewater type'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=385, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000353', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:WastewaterSludgeInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'WaterInterface': ClassDefinition(name='WaterInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WaterInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='water dh_interface', alt_descriptions={}, title='Water', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a='DhInterface', abstract=None, mixin=None, mixins=['DhMultiviewCommonColumnsMixin', 'SampIdNewTermsMixin'], apply_to=[], values_from=[], string_serialization=None, slots=['alkalinity', 'alkalinity_method', 'alkyl_diethers', 'aminopept_act', 'ammonium', 'atmospheric_data', 'bac_prod', 'bac_resp', 'bacteria_carb_prod', 'biomass', 'bishomohopanol', 'bromide', 'calcium', 'carb_nitro_ratio', 'chem_administration', 'chloride', 'chlorophyll', 'collection_date', 'conduc', 'density', 'depth', 'diether_lipids', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_inorg_nitro', 'diss_inorg_phosp', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'down_par', 'ecosystem', 'ecosystem_category', 'ecosystem_subtype', 'ecosystem_type', 'elev', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'experimental_factor', 'fluor', 'geo_loc_name', 'glucosidase_act', 'horizon_meth', 'lat_lon', 'light_intensity', 'mean_frict_vel', 'mean_peak_frict_vel', 'misc_param', 'n_alkanes', 'nitrate', 'nitrite', 'nitro', 'org_carb', 'org_matter', 'org_nitro', 'organism_count', 'oxy_stat_samp', 'part_org_carb', 'part_org_nitro', 'perturbation', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'phaeopigments', 'phosphate', 'phosplipid_fatt_acid', 'photon_flux', 'potassium', 'pressure', 'primary_prod', 'redox_potential', 'salinity', 'samp_collec_device', 'samp_collec_method', 'samp_mat_process', 'samp_size', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'WaterInterface_sample_link', 'silicate', 'size_frac', 'size_frac_low', 'size_frac_up', 'sodium', 'soluble_react_phosp', 'specific_ecosystem', 'sulfate', 'sulfide', 'suspend_part_matter', 'temp', 'tidal_stage', 'tot_depth_water_col', 'tot_diss_nitro', 'tot_inorg_nitro', 'tot_nitro', 'tot_part_carb', 'turbidity', 'water_current', 'WaterInterface_alkalinity', 'WaterInterface_alkalinity_method', 'WaterInterface_alkyl_diethers', 'WaterInterface_aminopept_act', 'WaterInterface_ammonium', 'WaterInterface_atmospheric_data', 'WaterInterface_bac_prod', 'WaterInterface_bac_resp', 'WaterInterface_bacteria_carb_prod', 'WaterInterface_biomass', 'WaterInterface_bishomohopanol', 'WaterInterface_bromide', 'WaterInterface_calcium', 'WaterInterface_carb_nitro_ratio', 'WaterInterface_chem_administration', 'WaterInterface_chloride', 'WaterInterface_chlorophyll', 'WaterInterface_collection_date', 'WaterInterface_conduc', 'WaterInterface_density', 'WaterInterface_depth', 'WaterInterface_diether_lipids', 'WaterInterface_diss_carb_dioxide', 'WaterInterface_diss_hydrogen', 'WaterInterface_diss_inorg_carb', 'WaterInterface_diss_inorg_nitro', 'WaterInterface_diss_inorg_phosp', 'WaterInterface_diss_org_carb', 'WaterInterface_diss_org_nitro', 'WaterInterface_diss_oxygen', 'WaterInterface_down_par', 'WaterInterface_ecosystem', 'WaterInterface_ecosystem_category', 'WaterInterface_ecosystem_subtype', 'WaterInterface_ecosystem_type', 'WaterInterface_elev', 'WaterInterface_env_broad_scale', 'WaterInterface_env_local_scale', 'WaterInterface_env_medium', 'WaterInterface_env_package', 'WaterInterface_experimental_factor', 'WaterInterface_fluor', 'WaterInterface_geo_loc_name', 'WaterInterface_glucosidase_act', 'WaterInterface_horizon_meth', 'WaterInterface_lat_lon', 'WaterInterface_light_intensity', 'WaterInterface_mean_frict_vel', 'WaterInterface_mean_peak_frict_vel', 'WaterInterface_misc_param', 'WaterInterface_n_alkanes', 'WaterInterface_nitrate', 'WaterInterface_nitrite', 'WaterInterface_nitro', 'WaterInterface_org_carb', 'WaterInterface_org_matter', 'WaterInterface_org_nitro', 'WaterInterface_organism_count', 'WaterInterface_oxy_stat_samp', 'WaterInterface_part_org_carb', 'WaterInterface_part_org_nitro', 'WaterInterface_perturbation', 'WaterInterface_petroleum_hydrocarb', 'WaterInterface_ph', 'WaterInterface_ph_meth', 'WaterInterface_phaeopigments', 'WaterInterface_phosphate', 'WaterInterface_phosplipid_fatt_acid', 'WaterInterface_photon_flux', 'WaterInterface_potassium', 'WaterInterface_pressure', 'WaterInterface_primary_prod', 'WaterInterface_redox_potential', 'WaterInterface_salinity', 'WaterInterface_samp_collec_device', 'WaterInterface_samp_collec_method', 'WaterInterface_samp_mat_process', 'WaterInterface_samp_size', 'WaterInterface_samp_store_dur', 'WaterInterface_samp_store_loc', 'WaterInterface_samp_store_temp', 'WaterInterface_silicate', 'WaterInterface_size_frac', 'WaterInterface_size_frac_low', 'WaterInterface_size_frac_up', 'WaterInterface_sodium', 'WaterInterface_soluble_react_phosp', 'WaterInterface_specific_ecosystem', 'WaterInterface_sulfate', 'WaterInterface_sulfide', 'WaterInterface_suspend_part_matter', 'WaterInterface_temp', 'WaterInterface_tidal_stage', 'WaterInterface_tot_depth_water_col', 'WaterInterface_tot_diss_nitro', 'WaterInterface_tot_inorg_nitro', 'WaterInterface_tot_nitro', 'WaterInterface_tot_part_carb', 'WaterInterface_turbidity', 'WaterInterface_water_current', 'DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id'], slot_usage={'alkalinity': SlotDefinition(name='alkalinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliequivalent per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate', alt_descriptions={}, title='alkalinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000421', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkalinity_method': SlotDefinition(name='alkalinity_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='description of method', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Method used for alkalinity measurement', alt_descriptions={}, title='alkalinity method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='titration', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkalinity method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=218, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000298', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alkyl_diethers': SlotDefinition(name='alkyl_diethers', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of alkyl diethers', alt_descriptions={}, title='alkyl diethers', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.005 mole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alkyl diethers'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000490', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aminopept_act': SlotDefinition(name='aminopept_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of aminopeptidase activity', alt_descriptions={}, title='aminopeptidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.269 mole per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['aminopeptidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000172', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ammonium': SlotDefinition(name='ammonium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of ammonium in the sample', alt_descriptions={}, title='ammonium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ammonium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000427', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'atmospheric_data': SlotDefinition(name='atmospheric_data', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='atmospheric data name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Measurement of atmospheric data; can include multiple data', alt_descriptions={}, title='atmospheric data', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='wind speed;9 knots', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['atmospheric data'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=219, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0001097', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bac_prod': SlotDefinition(name='bac_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Bacterial production in the water column measured by isotope uptake', alt_descriptions={}, title='bacterial production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter per day', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=220, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000683', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bac_resp': SlotDefinition(name='bac_resp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day, micromole oxygen per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial respiration in the water column', alt_descriptions={}, title='bacterial respiration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 micromole oxygen per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial respiration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=221, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000684', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bacteria_carb_prod': SlotDefinition(name='bacteria_carb_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of bacterial carbon production', alt_descriptions={}, title='bacterial carbon production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.53 microgram per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bacterial carbon production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000173', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'biomass': SlotDefinition(name='biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='biomass type;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='ton, kilogram, gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Amount of biomass; should include the name for the part of biomass measured, e.g. Microbial, total. Can include multiple measurements', alt_descriptions={}, title='biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total;20 gram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['biomass'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000174', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bishomohopanol': SlotDefinition(name='bishomohopanol', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, microgram per gram', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bishomohopanol', alt_descriptions={}, title='bishomohopanol', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='14 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bishomohopanol'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000175', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bromide': SlotDefinition(name='bromide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of bromide', alt_descriptions={}, title='bromide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 parts per million', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['bromide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000176', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'calcium': SlotDefinition(name='calcium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, micromole per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of calcium in the sample', alt_descriptions={}, title='calcium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['calcium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000432', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'carb_nitro_ratio': SlotDefinition(name='carb_nitro_ratio', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ratio of amount or concentrations of carbon to nitrogen', alt_descriptions={}, title='carbon/nitrogen ratio', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.417361111', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['carbon/nitrogen ratio'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000310', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chem_administration': SlotDefinition(name='chem_administration', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='CHEBI;timestamp', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi', alt_descriptions={}, title='chemical administration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22', description=None, object=None), Example(value='agar [CHEBI:2509];2018-05', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chemical administration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]};{timestamp}', singular_name=None, domain=None, slot_uri='MIXS:0000751', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\];([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chloride': SlotDefinition(name='chloride', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chloride in the sample', alt_descriptions={}, title='chloride', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5000 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chloride'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000429', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'chlorophyll': SlotDefinition(name='chlorophyll', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter, microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of chlorophyll', alt_descriptions={}, title='chlorophyll', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['chlorophyll'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000177', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_date': SlotDefinition(name='collection_date', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='date and time', extensions={}, annotations={})}, description='The date of sampling', alt_descriptions={}, title='collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arb prec date only', 'Use modified term (amended definition)'], comments=[], examples=[Example(value='2021-04-15', description=None, object=None), Example(value='2021-04', description=None, object=None), Example(value='2021', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['collection date'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri='MIXS:0000011', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conduc': SlotDefinition(name='conduc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milliSiemens per centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Electrical conductivity of water', alt_descriptions={}, title='conductivity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 milliSiemens per centimeter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['conductivity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=222, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000692', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'density': SlotDefinition(name='density', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='gram per cubic meter, gram per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Density of the sample, which is its mass per unit volume (aka volumetric mass density)', alt_descriptions={}, title='density', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1000 kilogram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['density'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000435', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'depth': SlotDefinition(name='depth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={})}, description='The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.', alt_descriptions={}, title='depth, meters', deprecated=None, todos=[], notes=['Use modified term'], comments=['All depths must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='0 - 0.1', description=None, object=None), Example(value='1', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['depth'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}|{float}-{float}', singular_name=None, domain=None, slot_uri='MIXS:0000018', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?(\\\\s*-\\\\s*[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diether_lipids': SlotDefinition(name='diether_lipids', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='diether lipid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='nanogram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of diether lipids; can include multiple types of diether lipids', alt_descriptions={}, title='diether lipids', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 nanogram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['diether lipids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000178', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_carb_dioxide': SlotDefinition(name='diss_carb_dioxide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample', alt_descriptions={}, title='dissolved carbon dioxide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved carbon dioxide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000436', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_hydrogen': SlotDefinition(name='diss_hydrogen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved hydrogen', alt_descriptions={}, title='dissolved hydrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved hydrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000179', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_carb': SlotDefinition(name='diss_inorg_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter', alt_descriptions={}, title='dissolved inorganic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2059 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000434', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_nitro': SlotDefinition(name='diss_inorg_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic nitrogen', alt_descriptions={}, title='dissolved inorganic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='761 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=223, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000698', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_inorg_phosp': SlotDefinition(name='diss_inorg_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved inorganic phosphorus in the sample', alt_descriptions={}, title='dissolved inorganic phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='56.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved inorganic phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=224, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_carb': SlotDefinition(name='diss_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid', alt_descriptions={}, title='dissolved organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='197 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=17, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000433', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_org_nitro': SlotDefinition(name='diss_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2', alt_descriptions={}, title='dissolved organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000162', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'diss_oxygen': SlotDefinition(name='diss_oxygen', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per kilogram, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of dissolved oxygen', alt_descriptions={}, title='dissolved oxygen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='175 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['dissolved oxygen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000119', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'down_par': SlotDefinition(name='down_par', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microEinstein per square meter per second, microEinstein per square centimeter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Visible waveband radiance and irradiance measurements in the water column', alt_descriptions={}, title='downward PAR', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='28.71 microEinstein per square meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['downward PAR'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=225, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000703', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem': SlotDefinition(name='ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_category': SlotDefinition(name='ecosystem_category', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_subtype': SlotDefinition(name='ecosystem_subtype', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ecosystem_type': SlotDefinition(name='ecosystem_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elev': SlotDefinition(name='elev', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit.\", alt_descriptions={}, title='elevation, meters', deprecated=None, todos=[], notes=[], comments=['All elevations must be reported in meters. Provide the numerical portion only.'], examples=[Example(value='100', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000093', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='float', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_broad_scale': SlotDefinition(name='env_broad_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS', alt_descriptions={}, title='broad-scale environmental context', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000012', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_local_scale': SlotDefinition(name='env_local_scale', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.', alt_descriptions={}, title='local environmental context', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000013', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_medium': SlotDefinition(name='env_medium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).\", alt_descriptions={}, title='environmental medium', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}', singular_name=None, domain=None, slot_uri='MIXS:0000014', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'env_package': SlotDefinition(name='env_package', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select the MIxS enviromental package that best describes the environment from which your sample was collected.', alt_descriptions={}, title='environmental package', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='soil', description=None, object=None)], in_subset=['mixs extension'], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['environmental package'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='attribute', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor': SlotDefinition(name='experimental_factor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text or EFO and/or OBI', extensions={}, annotations={})}, description='Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI', alt_descriptions={}, title='experimental factor', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='time series design [EFO:0001779]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['experimental factor'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000008', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'fluor': SlotDefinition(name='fluor', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram chlorophyll a per cubic meter, volts', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Raw or converted fluorescence of water', alt_descriptions={}, title='fluorescence', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 volts', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['fluorescence'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=226, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000704', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'geo_loc_name': SlotDefinition(name='geo_loc_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='country or sea name (INSDC or GAZ): region(GAZ), specific location name', extensions={}, annotations={})}, description='The geographical origin of the sample as defined by the country or sea name followed by specific region name.', alt_descriptions={}, title='geographic location (country and/or sea,region)', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='USA: Maryland, Bethesda', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['geographic location (country and/or sea,region)'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{term}: {term}, {text}', singular_name=None, domain=None, slot_uri='MIXS:0000010', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'glucosidase_act': SlotDefinition(name='glucosidase_act', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mol per liter per hour', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of glucosidase activity', alt_descriptions={}, title='glucosidase activity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 mol per liter per hour', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['glucosidase activity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000137', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'horizon_meth': SlotDefinition(name='horizon_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI or url', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Reference or method used in determining the horizon', alt_descriptions={}, title='soil horizon method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soil horizon method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0000321', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'lat_lon': SlotDefinition(name='lat_lon', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"This is currently a required field but it's not clear if this should be required for human hosts\", alt_descriptions={}, title='geographic location (latitude and longitude)', deprecated=None, todos=[], notes=['required where?'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {float}', singular_name=None, domain=None, slot_uri='MIXS:0000009', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['FieldResearchSite', 'Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'light_intensity': SlotDefinition(name='light_intensity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='lux', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of light intensity', alt_descriptions={}, title='light intensity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 lux', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['light intensity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=227, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000706', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_frict_vel': SlotDefinition(name='mean_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean friction velocity', alt_descriptions={}, title='mean friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=22, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000498', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mean_peak_frict_vel': SlotDefinition(name='mean_peak_frict_vel', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter per second', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of mean peak friction velocity', alt_descriptions={}, title='mean peak friction velocity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1 meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['mean peak friction velocity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000502', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'misc_param': SlotDefinition(name='misc_param', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='parameter name;measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Any other measurement performed or parameter collected, that is not listed here', alt_descriptions={}, title='miscellaneous parameter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Bicarbonate ion concentration;2075 micromole per kilogram', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['miscellaneous parameter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000752', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'n_alkanes': SlotDefinition(name='n_alkanes', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='n-alkane name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of n-alkanes; can include multiple n-alkanes', alt_descriptions={}, title='n-alkanes', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='n-hexadecane;100 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['n-alkanes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000503', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrate': SlotDefinition(name='nitrate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrate in the sample', alt_descriptions={}, title='nitrate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='65 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=26, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000425', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitrite': SlotDefinition(name='nitrite', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrite in the sample', alt_descriptions={}, title='nitrite', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrite'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000426', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nitro': SlotDefinition(name='nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of nitrogen (total)', alt_descriptions={}, title='nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4.2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=28, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000504', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_carb': SlotDefinition(name='org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic carbon', alt_descriptions={}, title='organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.5 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000508', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_matter': SlotDefinition(name='org_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic matter', alt_descriptions={}, title='organic matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.75 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000204', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro': SlotDefinition(name='org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of organic nitrogen', alt_descriptions={}, title='organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='4 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000205', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'organism_count': SlotDefinition(name='organism_count', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='organism name;measurement value;enumeration', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)', alt_descriptions={}, title='organism count', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['organism count'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=30, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000103', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other)\\\\|)*(\\\\S+.*\\\\S+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+.*\\\\S+;(qPCR|ATP|MPN|other))$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Oxygenation status of sample', alt_descriptions={}, title='oxygenation status of sample', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000753', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_carb': SlotDefinition(name='part_org_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic carbon', alt_descriptions={}, title='particulate organic carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='1.92 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000515', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'part_org_nitro': SlotDefinition(name='part_org_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of particulate organic nitrogen', alt_descriptions={}, title='particulate organic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['particulate organic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=228, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000719', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'perturbation': SlotDefinition(name='perturbation', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='perturbation type name;perturbation interval and duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types', alt_descriptions={}, title='perturbation', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['perturbation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=33, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{Rn/start_time/end_time/duration}', singular_name=None, domain=None, slot_uri='MIXS:0000754', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'petroleum_hydrocarb': SlotDefinition(name='petroleum_hydrocarb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of petroleum hydrocarbon', alt_descriptions={}, title='petroleum hydrocarbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['petroleum hydrocarbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=34, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000516', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph': SlotDefinition(name='ph', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Ph measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid', alt_descriptions={}, title='pH', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='7.2', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pH'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0001001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='double', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ph_meth': SlotDefinition(name='ph_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining ph', alt_descriptions={}, title='pH method', deprecated=None, todos=[], notes=[], comments=['This can include a link to the instrument used or a citation for the method.'], examples=[Example(value='https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB', description=None, object=None), Example(value='https://doi.org/10.2136/sssabookser5.3.c16', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri='MIXS:0001106', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phaeopigments': SlotDefinition(name='phaeopigments', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phaeopigment name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phaeopigments; can include multiple phaeopigments', alt_descriptions={}, title='phaeopigments', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.5 milligram per cubic meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phaeopigments'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000180', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosphate': SlotDefinition(name='phosphate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of phosphate', alt_descriptions={}, title='phosphate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.7 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phosphate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=53, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000505', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'phosplipid_fatt_acid': SlotDefinition(name='phosplipid_fatt_acid', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='phospholipid fatty acid name;measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='mole per gram, mole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='m', extensions={}, annotations={})}, description='Concentration of phospholipid fatty acids; can include multiple values', alt_descriptions={}, title='phospholipid fatty acid', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2.98 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['phospholipid fatty acid'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=36, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000181', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+\\\\|)*([^;\\\\t\\\\r\\\\x0A]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A]+)$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'photon_flux': SlotDefinition(name='photon_flux', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='number of photons per second per unit area', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of photon flux', alt_descriptions={}, title='photon flux', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='3.926 micromole photons per second per square meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['photon flux'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=229, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000725', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'potassium': SlotDefinition(name='potassium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of potassium in the sample', alt_descriptions={}, title='potassium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='463 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['potassium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=38, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000430', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pressure': SlotDefinition(name='pressure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='atmosphere', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Pressure to which the sample is subject to, in atmospheres', alt_descriptions={}, title='pressure', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 atmosphere', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['pressure'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=39, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000412', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'primary_prod': SlotDefinition(name='primary_prod', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per cubic meter per day, gram per square meter per day', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of primary production, generally measured as isotope uptake', alt_descriptions={}, title='primary production', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='100 milligram per cubic meter per day', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary production'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=230, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000728', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'redox_potential': SlotDefinition(name='redox_potential', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millivolt', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential', alt_descriptions={}, title='redox potential', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='300 millivolt', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['redox potential'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=40, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000182', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'salinity': SlotDefinition(name='salinity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='practical salinity unit, percentage', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.', alt_descriptions={}, title='salinity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 practical salinity unit', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['salinity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=54, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000183', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_device': SlotDefinition(name='samp_collec_device', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='device name', extensions={}, annotations={})}, description='The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).', alt_descriptions={}, title='sample collection device', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection device'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0000002', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_collec_method': SlotDefinition(name='samp_collec_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='PMID,DOI,url , or text', extensions={}, annotations={})}, description='The method employed for collecting the sample.', alt_descriptions={}, title='sample collection method', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='swabbing', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample collection method'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}|{text}', singular_name=None, domain=None, slot_uri='MIXS:0001225', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_mat_process': SlotDefinition(name='samp_mat_process', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed.', alt_descriptions={}, title='sample material processing', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='filtering of seawater', description=None, object=None), Example(value='storing samples in ethanol', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample material processing'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000016', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_size': SlotDefinition(name='samp_size', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='millliter, gram, milligram, liter', extensions={}, annotations={})}, description='The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.', alt_descriptions={}, title='amount or size of sample collected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['amount or size of sample collected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=18, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000001', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_dur': SlotDefinition(name='samp_store_dur', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='duration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Duration for which the sample was stored', alt_descriptions={}, title='sample storage duration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='P1Y6M', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage duration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=353, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{duration}', singular_name=None, domain=None, slot_uri='MIXS:0000116', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_loc': SlotDefinition(name='samp_store_loc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='location name', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Location at which sample was stored, usually name of a specific freezer/room', alt_descriptions={}, title='sample storage location', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='Freezer no:5', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage location'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=41, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0000755', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_store_temp': SlotDefinition(name='samp_store_temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Temperature at which sample was stored, e.g. -80 degree Celsius', alt_descriptions={}, title='sample storage temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='-80 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample storage temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000110', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sample_link': SlotDefinition(name='sample_link', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A unique identifier to assign parent-child, subsample, or sibling samples. This is relevant when a sample or other material was used to generate the new sample.', alt_descriptions={}, title='sample linkage', deprecated=None, todos=[], notes=['also tempted to include SampIdNewTermsMixin but if len(slot_usage.keys()) > 1 and \"placeholder\" in slot_usage.keys():AttributeError: \\'list\\' object has no attribute \\'keys\\''], comments=['This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)'], examples=[Example(value='IGSN:DSJ0284', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'silicate': SlotDefinition(name='silicate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of silicate', alt_descriptions={}, title='silicate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.05 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['silicate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=43, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000184', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac': SlotDefinition(name='size_frac', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='filter size value range', extensions={}, annotations={})}, description='Filtering pore size used in sample preparation', alt_descriptions={}, title='size fraction selected', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0-0.22 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size fraction selected'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=285, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float}-{float} {unit}', singular_name=None, domain=None, slot_uri='MIXS:0000017', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_low': SlotDefinition(name='size_frac_low', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction lower threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.2 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction lower threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000735', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'size_frac_up': SlotDefinition(name='size_frac_up', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micrometer', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample', alt_descriptions={}, title='size-fraction upper threshold', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='20 micrometer', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['size-fraction upper threshold'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000736', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_modified_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sodium': SlotDefinition(name='sodium', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Sodium concentration in the sample', alt_descriptions={}, title='sodium', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sodium'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=363, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000428', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'soluble_react_phosp': SlotDefinition(name='soluble_react_phosp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of soluble reactive phosphorus', alt_descriptions={}, title='soluble reactive phosphorus', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.1 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['soluble reactive phosphorus'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=231, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000738', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'specific_ecosystem': SlotDefinition(name='specific_ecosystem', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['https://gold.jgi.doe.gov/help'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, is_a='gold_path_field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample', 'Study'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfate': SlotDefinition(name='sulfate', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfate in the sample', alt_descriptions={}, title='sulfate', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='5 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfate'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=44, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000423', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sulfide': SlotDefinition(name='sulfide', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='micromole per liter, milligram per liter, parts per million', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of sulfide in the sample', alt_descriptions={}, title='sulfide', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='2 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sulfide'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=371, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000424', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'suspend_part_matter': SlotDefinition(name='suspend_part_matter', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Concentration of suspended particulate matter', alt_descriptions={}, title='suspended particulate matter', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.5 milligram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['suspended particulate matter'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=232, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000741', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'temp': SlotDefinition(name='temp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='degree Celsius', extensions={}, annotations={})}, description='Temperature of the sample at the time of sampling.', alt_descriptions={}, title='temperature', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='25 degree Celsius', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['temperature'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=37, is_a='environment field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000113', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tidal_stage': SlotDefinition(name='tidal_stage', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='enumeration', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Stage of tide', alt_descriptions={}, title='tidal stage', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='high tide', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['tidal stage'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=45, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000750', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='tidal_stage_enum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_depth_water_col': SlotDefinition(name='tot_depth_water_col', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='meter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of total depth of water column', alt_descriptions={}, title='total depth of water column', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='500 meter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total depth of water column'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=46, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000634', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_diss_nitro': SlotDefinition(name='tot_diss_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total dissolved nitrogen concentration, reported as nitrogen, measured by: total dissolved nitrogen = NH4 + NO3NO2 + dissolved organic nitrogen', alt_descriptions={}, title='total dissolved nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='40 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total dissolved nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=233, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000744', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_inorg_nitro': SlotDefinition(name='tot_inorg_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total inorganic nitrogen content', alt_descriptions={}, title='total inorganic nitrogen', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='40 microgram per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total inorganic nitrogen'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=234, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000745', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_nitro': SlotDefinition(name='tot_nitro', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter, milligram per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen', alt_descriptions={}, title='total nitrogen concentration', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='50 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total nitrogen concentration'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=377, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000102', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tot_part_carb': SlotDefinition(name='tot_part_carb', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='microgram per liter, micromole per liter', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Total particulate carbon content', alt_descriptions={}, title='total particulate carbon', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='35 micromole per liter', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['total particulate carbon'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=235, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000747', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'turbidity': SlotDefinition(name='turbidity', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='formazin turbidity unit, formazin nephelometric units', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measure of the amount of cloudiness or haziness in water caused by individual particles', alt_descriptions={}, title='turbidity', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='0.3 nephelometric turbidity units', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['turbidity'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=47, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000191', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'water_current': SlotDefinition(name='water_current', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='measurement value', extensions={}, annotations={}), 'preferred_unit': Annotation(tag='preferred_unit', value='cubic meter per second, knots', extensions={}, annotations={}), 'occurrence': Annotation(tag='occurrence', value='1', extensions={}, annotations={})}, description='Measurement of magnitude and direction of flow within a fluid', alt_descriptions={}, title='water current', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='10 cubic meter per second', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['water current'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=236, is_a='core field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='MIXS:0000203', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_core_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+ +\\\\S.*$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:WaterInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DhMultiviewCommonColumnsMixin': ClassDefinition(name='DhMultiviewCommonColumnsMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DhMultiviewCommonColumnsMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with DhMutliviewCommon Columns', alt_descriptions={}, title='Dh Mutliview Common Columns', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['DhMultiviewCommonColumnsMixin_analysis_type', 'samp_name', 'source_mat_id', 'DhMultiviewCommonColumnsMixin_samp_name', 'DhMultiviewCommonColumnsMixin_source_mat_id', 'DhMultiviewCommonColumnsMixin_oxy_stat_samp'], slot_usage={'analysis_type': SlotDefinition(name='analysis_type', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Select all the data types associated or available for this biosample', alt_descriptions={}, title='analysis/data type', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='metagenomics; metabolomics; proteomics', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:investigation_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=True, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='analysis_type_enum', range_expression=None, enum_range=None, required=True, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'samp_name': SlotDefinition(name='samp_name', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={'expected_value': Annotation(tag='expected_value', value='text', extensions={}, annotations={})}, description='A local identifier or name that for the material sample collected. Refers to the original material collected or to any derived sub-samples.', alt_descriptions={}, title='sample name', deprecated=None, todos=[], notes=[], comments=['It can have any format, but we suggest that you make it concise, unique and consistent within your lab, and as informative as possible.'], examples=[Example(value='Rock core CB1178(5-6) from NSW', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['sample name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a='investigation field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri='MIXS:0001107', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=True, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_mat_id': SlotDefinition(name='source_mat_id', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A globally unique identifier assigned to the biological sample.', alt_descriptions={}, title='source material identifier', deprecated=None, todos=['Currently, the comments say to use UUIDs. However, if we implement assigning NMDC identifiers with the minter we dont need to require a GUID. It can be an optional field to fill out only if they already have a resolvable ID.', 'Currently, the comments say to use UUIDs. However, if we implement assigning NMDC identifiers with the minter we dont need to require a GUID. It can be an optional field to fill out only if they already have a resolvable ID.'], notes=['The source material IS the Globally Unique ID'], comments=['Identifiers must be prefixed. Possible FAIR prefixes are IGSNs (http://www.geosamples.org/getigsn), NCBI biosample accession numbers, ARK identifiers (https://arks.org/). These IDs enable linking to derived analytes and subsamples. If you have not assigned FAIR identifiers to your samples, you can generate UUIDs (https://www.uuidgenerator.net/).', 'Identifiers must be prefixed. Possible FAIR prefixes are IGSNs (http://www.geosamples.org/getigsn), NCBI biosample accession numbers, ARK identifiers (https://arks.org/). These IDs enable linking to derived analytes and subsamples. If you have not assigned FAIR identifiers to your samples, you can generate UUIDs (https://www.uuidgenerator.net/).'], examples=[Example(value='IGSN:AU1243', description=None, object=None), Example(value='UUID:24f1467a-40f4-11ed-b878-0242ac120002', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a='nucleic acid sequence source field', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}:{text}', singular_name=None, domain=None, slot_uri='MIXS:0000026', multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='sample_id_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='[^\\\\:\\\\n\\\\r]+\\\\:[^\\\\:\\\\n\\\\r]+', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'oxy_stat_samp': SlotDefinition(name='oxy_stat_samp', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, multivalued=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='OxyStatSampEnum', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:DhMultiviewCommonColumnsMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SampIdNewTermsMixin': ClassDefinition(name='SampIdNewTermsMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampIdNewTermsMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with SampIdNew Terms', alt_descriptions={}, title='SampId New Terms', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['sample_link'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:SampIdNewTermsMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SoilMixsInspiredMixin': ClassDefinition(name='SoilMixsInspiredMixin', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilMixsInspiredMixin', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Mixin with SoilMixsInspired Terms', alt_descriptions={}, title='Soil MIxS Inspired Mixin', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['SoilMixsInspiredMixin_collection_date_inc', 'SoilMixsInspiredMixin_collection_time', 'SoilMixsInspiredMixin_collection_time_inc', 'SoilMixsInspiredMixin_experimental_factor_other', 'SoilMixsInspiredMixin_filter_method', 'SoilMixsInspiredMixin_isotope_exposure', 'SoilMixsInspiredMixin_micro_biomass_c_meth', 'SoilMixsInspiredMixin_micro_biomass_n_meth', 'SoilMixsInspiredMixin_microbial_biomass_c', 'SoilMixsInspiredMixin_microbial_biomass_n', 'SoilMixsInspiredMixin_non_microb_biomass', 'SoilMixsInspiredMixin_non_microb_biomass_method', 'SoilMixsInspiredMixin_org_nitro_method', 'SoilMixsInspiredMixin_other_treatment', 'SoilMixsInspiredMixin_start_date_inc', 'SoilMixsInspiredMixin_start_time_inc', 'collection_date_inc', 'collection_time', 'collection_time_inc', 'experimental_factor_other', 'filter_method', 'isotope_exposure', 'micro_biomass_c_meth', 'micro_biomass_n_meth', 'microbial_biomass_c', 'microbial_biomass_n', 'non_microb_biomass', 'non_microb_biomass_method', 'org_nitro_method', 'other_treatment', 'start_date_inc', 'start_time_inc'], slot_usage={'collection_date_inc': SlotDefinition(name='collection_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time': SlotDefinition(name='collection_time', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The time of sampling, either as an instance (single point) or interval.', alt_descriptions={}, title='collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'collection_time_inc': SlotDefinition(name='collection_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was harvested/collected/ended. Only relevant for incubation samples.', alt_descriptions={}, title='incubation collection time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'experimental_factor_other': SlotDefinition(name='experimental_factor_other', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=\"Other details about your sample that you feel can't be accurately represented in the available columns.\", alt_descriptions={}, title='experimental factor- other', deprecated=None, todos=[], notes=[], comments=['This slot accepts open-ended text about your sample.', 'We recommend using key:value pairs.', 'Provided pairs will be considered for inclusion as future slots/terms in this data collection template.'], examples=[Example(value='experimental treatment: value', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:experimental_factor|additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'filter_method': SlotDefinition(name='filter_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Type of filter used or how the sample was filtered', alt_descriptions={}, title='filter method', deprecated=None, todos=[], notes=[], comments=['describe the filter or provide a catalog number and manufacturer'], examples=[Example(value='C18', description=None, object=None), Example(value='Basix PES, 13-100-106 FisherSci', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:filter_type'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'isotope_exposure': SlotDefinition(name='isotope_exposure', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='List isotope exposure or addition applied to your sample.', alt_descriptions={}, title='isotope exposure/addition', deprecated=None, todos=['Can we make the H218O correctly super and subscripted?'], notes=[], comments=['This is required when your experimental design includes the use of isotopically labeled compounds'], examples=[Example(value='13C glucose', description=None, object=None), Example(value='H218O', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:chem_administration'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{termLabel} {[termID]}; {timestamp}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^\\\\S+.*\\\\S+ \\\\[[a-zA-Z]{2,}:\\\\d+\\\\]; ([\\\\+-]?\\\\d{4}(?!\\\\d{2}\\\\b))((-?)((0[1-9]|1[0-2])(\\\\3([12]\\\\d|0[1-9]|3[01]))?|W([0-4]\\\\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\\\\d|[12]\\\\d{2}|3([0-5]\\\\d|6[1-6])))([T\\\\s]((([01]\\\\d|2[0-3])((:?)[0-5]\\\\d)?|24\\\\:?00)([\\\\.,]\\\\d+(?!:))?)?(\\\\17[0-5]\\\\d([\\\\.,]\\\\d+)?)?([zZ]|([\\\\+-])([01]\\\\d|2[0-3]):?([0-5]\\\\d)?)?)?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_c_meth': SlotDefinition(name='micro_biomass_c_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass carbon', alt_descriptions={}, title='microbial biomass carbon method', deprecated=None, todos=['How should we separate values? | or ;? lets be consistent'], notes=[], comments=['required if \"microbial_biomass_c\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'micro_biomass_n_meth': SlotDefinition(name='micro_biomass_n_meth', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining microbial biomass nitrogen', alt_descriptions={}, title='microbial biomass nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"microbial_biomass_n\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(87)90052-6', description=None, object=None), Example(value='https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:micro_biomass_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_c': SlotDefinition(name='microbial_biomass_c', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass carbon', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug C/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'microbial_biomass_n': SlotDefinition(name='microbial_biomass_n', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer.', alt_descriptions={}, title='microbial biomass nitrogen', deprecated=None, todos=[], notes=[], comments=['If you provide this, correction factors used for conversion to the final units and method are required'], examples=[Example(value='0.05 ug N/g dry soil', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1004, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? \\\\S+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass': SlotDefinition(name='non_microb_biomass', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Amount of biomass; should include the name for the part of biomass measured, e.g.insect, plant, total. Can include multiple measurements separated by ;', alt_descriptions={}, title='non-microbial biomass', deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='insect 0.23 ug; plant 1g', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:biomass|microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text};{float} {unit}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[^;\\\\t\\\\r\\\\x0A\\\\|]+;[-+]?[0-9]*\\\\.?[0-9]+([eE][-+]?[0-9]+)? [^;\\\\t\\\\r\\\\x0A\\\\|]+$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'non_microb_biomass_method': SlotDefinition(name='non_microb_biomass_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Reference or method used in determining biomass', alt_descriptions={}, title='non-microbial biomass method', deprecated=None, todos=[], notes=[], comments=['required if \"non-microbial biomass\" is provided'], examples=[Example(value='https://doi.org/10.1038/s41467-021-26181-3', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:microbial_biomass'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'org_nitro_method': SlotDefinition(name='org_nitro_method', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Method used for obtaining organic nitrogen', alt_descriptions={}, title='organic nitrogen method', deprecated=None, todos=[], notes=[], comments=['required if \"org_nitro\" is provided'], examples=[Example(value='https://doi.org/10.1016/0038-0717(85)90144-0', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:org_nitro|tot_nitro_cont_meth'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=14, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{PMID}|{DOI}|{URL}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'other_treatment': SlotDefinition(name='other_treatment', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Other treatments applied to your samples that are not applicable to the provided fields', alt_descriptions={}, title='other treatments', deprecated=None, todos=[], notes=[], comments=['This is an open text field to provide any treatments that cannot be captured in the provided slots.'], examples=[], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:additional_info'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=15, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{text}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_date_inc': SlotDefinition(name='start_date_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Date the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start date', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision date only'], comments=['Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.'], examples=[Example(value='2021-04-15, 2021-04 and 2021 are all acceptable.', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{date, arbitrary precision}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^[12]\\\\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\\\\d|3[01]))?)?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'start_time_inc': SlotDefinition(name='start_time_inc', id_prefixes=[], definition_uri=None, local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Time the incubation was started. Only relevant for incubation samples.', alt_descriptions={}, title='incubation start time, GMT', deprecated=None, todos=[], notes=['MIxS collection_date accepts (truncated) ISO8601. DH taking seconds optional time only'], comments=['Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter'], examples=[Example(value='13:33 or 13:33:55', description=None, object=None)], in_subset=[], from_schema='https://w3id.org/nmdc/nmdc', imported_from=None, source=None, in_language=None, see_also=['MIxS:collection_date'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization='{time, seconds optional}', singular_name=None, domain=None, slot_uri=None, multivalued=False, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner='Biosample', domain_of=['Biosample'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group='mixs_inspired_section', is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], range='string', range_expression=None, enum_range=None, required=None, recommended=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern='^([01]?\\\\d|2[0-3]|24(?=:00?:00?$)):([0-5]\\\\d)(:([0-5]\\\\d))?$', structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='nmdc_sub_schema:SoilMixsInspiredMixin', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'DhInterface': ClassDefinition(name='DhInterface', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DhInterface', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='One DataHarmonizer interface, for the specified combination of a checklist, enviornmental_package, and various standards, user facilities or analysis types', alt_descriptions={}, title='Dh Root Interface', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:DhInterface', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'SampleData': ClassDefinition(name='SampleData', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleData', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='represents data produced by the DataHarmonizer tabs of the submission portal', alt_descriptions={}, title='SampleData', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['air_data', 'biofilm_data', 'built_env_data', 'host_associated_data', 'plant_associated_data', 'sediment_data', 'soil_data', 'wastewater_sludge_data', 'water_data', 'emsl_data', 'jgi_mg_data', 'jgi_mt_data'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:SampleData', subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'NamedThing': ClassDefinition(name='NamedThing', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/NamedThing', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a databased entity or concept/class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'name', 'description', 'alternative_identifiers'], slot_usage={}, attributes={}, class_uri='nmdc_sub_schema:NamedThing', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}" ; + linkml:enums "{'AnalysisTypeEnum': EnumDefinition(name='AnalysisTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AnalysisTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metabolomics': PermissibleValue(text='metabolomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metagenomics': PermissibleValue(text='metagenomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metaproteomics': PermissibleValue(text='metaproteomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metatranscriptomics': PermissibleValue(text='metatranscriptomics', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural organic matter': PermissibleValue(text='natural organic matter', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'BioticRelationshipEnum': EnumDefinition(name='BioticRelationshipEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BioticRelationshipEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'commensalism': PermissibleValue(text='commensalism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='samp_biotic_relationship', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['biotic_relationship_enum: free living', 'parasitism', 'commensalism', 'symbiotic', 'mutualism'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/biotic_relationship_enum/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'free living': PermissibleValue(text='free living', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mutualism': PermissibleValue(text='mutualism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'parasitism': PermissibleValue(text='parasitism', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'symbiotic': PermissibleValue(text='symbiotic', description='placeholder enum descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'JgiContTypeEnum': EnumDefinition(name='JgiContTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/JgiContTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'plate': PermissibleValue(text='plate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tube': PermissibleValue(text='tube', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'DnaSampleFormatEnum': EnumDefinition(name='DnaSampleFormatEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemCategoryEnum': EnumDefinition(name='EcosystemCategoryEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemCategoryEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Terrestrial': PermissibleValue(text='Terrestrial', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://github.com/microbiomedata/sheets_and_friends/issues/22'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemEnum': EnumDefinition(name='EcosystemEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Environmental': PermissibleValue(text='Environmental', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemSubtypeEnum': EnumDefinition(name='EcosystemSubtypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemSubtypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Biocrust': PermissibleValue(text='Biocrust', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Biofilm': PermissibleValue(text='Biofilm', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bulk soil': PermissibleValue(text='Bulk soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Clay': PermissibleValue(text='Clay', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Floodplain': PermissibleValue(text='Floodplain', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fossil': PermissibleValue(text='Fossil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Glacier': PermissibleValue(text='Glacier', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Loam': PermissibleValue(text='Loam', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mineral horizon': PermissibleValue(text='Mineral horizon', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Nature reserve': PermissibleValue(text='Nature reserve', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Organic layer': PermissibleValue(text='Organic layer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paddy field/soil': PermissibleValue(text='Paddy field/soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pasture': PermissibleValue(text='Pasture', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Peat': PermissibleValue(text='Peat', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ranch': PermissibleValue(text='Ranch', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sand': PermissibleValue(text='Sand', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silt': PermissibleValue(text='Silt', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Soil crust': PermissibleValue(text='Soil crust', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unclassified': PermissibleValue(text='Unclassified', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Watershed': PermissibleValue(text='Watershed', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Wetlands': PermissibleValue(text='Wetlands', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EcosystemTypeEnum': EnumDefinition(name='EcosystemTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EcosystemTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Soil': PermissibleValue(text='Soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvPackageEnum': EnumDefinition(name='EnvPackageEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvPackageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[\"I don't think this is a MIxS term anymore, so it make sense to define it here\"], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'GrowthFacilEnum': EnumDefinition(name='GrowthFacilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GrowthFacilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'experimental_garden': PermissibleValue(text='experimental_garden', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='growth_facility', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['string range according to MIxS'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/growth_facil/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field': PermissibleValue(text='field', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field_incubation': PermissibleValue(text='field_incubation', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glasshouse': PermissibleValue(text='glasshouse', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'greenhouse': PermissibleValue(text='greenhouse', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'growth_chamber': PermissibleValue(text='growth_chamber', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lab_incubation': PermissibleValue(text='lab_incubation', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'open_top_chamber': PermissibleValue(text='open_top_chamber', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'RelToOxygenEnum': EnumDefinition(name='RelToOxygenEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RelToOxygenEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobe': PermissibleValue(text='aerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='oxygen_relationship', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=['https://genomicsstandardsconsortium.github.io/mixs/rel_to_oxygen_enum/'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobe': PermissibleValue(text='anaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'facultative': PermissibleValue(text='facultative', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'microaerophilic': PermissibleValue(text='microaerophilic', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'microanaerobe': PermissibleValue(text='microanaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'obligate aerobe': PermissibleValue(text='obligate aerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'obligate anaerobe': PermissibleValue(text='obligate anaerobe', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'RnaSampleFormatEnum': EnumDefinition(name='RnaSampleFormatEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'SampleTypeEnum': EnumDefinition(name='SampleTypeEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water_extract_soil': PermissibleValue(text='water_extract_soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'SpecificEcosystemEnum': EnumDefinition(name='SpecificEcosystemEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SpecificEcosystemEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Agricultural': PermissibleValue(text='Agricultural', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Agricultural land': PermissibleValue(text='Agricultural land', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Agricultural soil': PermissibleValue(text='Agricultural soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Alpine': PermissibleValue(text='Alpine', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bog': PermissibleValue(text='Bog', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Boreal forest': PermissibleValue(text='Boreal forest', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Contaminated': PermissibleValue(text='Contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Desert': PermissibleValue(text='Desert', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Farm': PermissibleValue(text='Farm', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Forest soil': PermissibleValue(text='Forest soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Forest Soil': PermissibleValue(text='Forest Soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Grasslands': PermissibleValue(text='Grasslands', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Meadow': PermissibleValue(text='Meadow', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mine': PermissibleValue(text='Mine', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mine drainage': PermissibleValue(text='Mine drainage', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Oil-contaminated': PermissibleValue(text='Oil-contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Orchard soil': PermissibleValue(text='Orchard soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permafrost': PermissibleValue(text='Permafrost', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Riparian soil': PermissibleValue(text='Riparian soil', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'River': PermissibleValue(text='River', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shrubland': PermissibleValue(text='Shrubland', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tropical rainforest': PermissibleValue(text='Tropical rainforest', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unclassified': PermissibleValue(text='Unclassified', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Uranium contaminated': PermissibleValue(text='Uranium contaminated', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'StoreCondEnum': EnumDefinition(name='StoreCondEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/StoreCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'fresh': PermissibleValue(text='fresh', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'sntc_name': Annotation(tag='sntc_name', value='storage_condt', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['see samp_store_dur, samp_store_loc, samp_store_temp and store_cond (which takes a string range according to mixs-source).'], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frozen': PermissibleValue(text='frozen', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lyophilized': PermissibleValue(text='lyophilized', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'YesNoEnum': EnumDefinition(name='YesNoEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/YesNoEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='replaces DnaDnaseEnum and DnaseRnaEnum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'no': PermissibleValue(text='no', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'yes': PermissibleValue(text='yes', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvBroadScaleSoilEnum': EnumDefinition(name='EnvBroadScaleSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvBroadScaleSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'arid biome [ENVO:01001838]': PermissibleValue(text='arid biome [ENVO:01001838]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subalpine biome [ENVO:01001837]': PermissibleValue(text='subalpine biome [ENVO:01001837]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'montane biome [ENVO:01001836]': PermissibleValue(text='montane biome [ENVO:01001836]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__montane savanna biome [ENVO:01000223]': PermissibleValue(text='__montane savanna biome [ENVO:01000223]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__montane shrubland biome [ENVO:01000216]': PermissibleValue(text='__montane shrubland biome [ENVO:01000216]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alpine biome [ENVO:01001835]': PermissibleValue(text='alpine biome [ENVO:01001835]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alpine tundra biome [ENVO:01001505]': PermissibleValue(text='__alpine tundra biome [ENVO:01001505]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subpolar biome [ENVO:01001834]': PermissibleValue(text='subpolar biome [ENVO:01001834]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'subtropical biome [ENVO:01001832]': PermissibleValue(text='subtropical biome [ENVO:01001832]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mediterranean biome [ENVO:01001833]': PermissibleValue(text='__mediterranean biome [ENVO:01001833]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean savanna biome [ENVO:01000229]': PermissibleValue(text='____mediterranean savanna biome [ENVO:01000229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean shrubland biome [ENVO:01000217]': PermissibleValue(text='____mediterranean shrubland biome [ENVO:01000217]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____mediterranean woodland biome [ENVO:01000208]': PermissibleValue(text='____mediterranean woodland biome [ENVO:01000208]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical woodland biome [ENVO:01000222]': PermissibleValue(text='__subtropical woodland biome [ENVO:01000222]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical shrubland biome [ENVO:01000213]': PermissibleValue(text='__subtropical shrubland biome [ENVO:01000213]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__subtropical savanna biome [ENVO:01000187]': PermissibleValue(text='__subtropical savanna biome [ENVO:01000187]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'temperate biome [ENVO:01001831]': PermissibleValue(text='temperate biome [ENVO:01001831]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate woodland biome [ENVO:01000221]': PermissibleValue(text='__temperate woodland biome [ENVO:01000221]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate shrubland biome [ENVO:01000215]': PermissibleValue(text='__temperate shrubland biome [ENVO:01000215]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__temperate savanna biome [ENVO:01000189]': PermissibleValue(text='__temperate savanna biome [ENVO:01000189]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical biome [ENVO:01001830]': PermissibleValue(text='tropical biome [ENVO:01001830]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical woodland biome [ENVO:01000220]': PermissibleValue(text='__tropical woodland biome [ENVO:01000220]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical shrubland biome [ENVO:01000214]': PermissibleValue(text='__tropical shrubland biome [ENVO:01000214]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tropical savanna biome [ENVO:01000188]': PermissibleValue(text='__tropical savanna biome [ENVO:01000188]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'polar biome [ENVO:01000339]': PermissibleValue(text='polar biome [ENVO:01000339]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrestrial biome [ENVO:00000446]': PermissibleValue(text='terrestrial biome [ENVO:00000446]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__anthropogenic terrestrial biome [ENVO:01000219]': PermissibleValue(text='__anthropogenic terrestrial biome [ENVO:01000219]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____dense settlement biome [ENVO:01000248]': PermissibleValue(text='____dense settlement biome [ENVO:01000248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______urban biome [ENVO:01000249]': PermissibleValue(text='______urban biome [ENVO:01000249]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____rangeland biome [ENVO:01000247]': PermissibleValue(text='____rangeland biome [ENVO:01000247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____village biome [ENVO:01000246]': PermissibleValue(text='____village biome [ENVO:01000246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mangrove biome [ENVO:01000181]': PermissibleValue(text='__mangrove biome [ENVO:01000181]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__tundra biome [ENVO:01000180]': PermissibleValue(text='__tundra biome [ENVO:01000180]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____alpine tundra biome [ENVO:01001505]': PermissibleValue(text='____alpine tundra biome [ENVO:01001505]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__shrubland biome [ENVO:01000176]': PermissibleValue(text='__shrubland biome [ENVO:01000176]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tidal mangrove shrubland [ENVO:01001369]': PermissibleValue(text='____tidal mangrove shrubland [ENVO:01001369]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____xeric shrubland biome [ENVO:01000218]': PermissibleValue(text='____xeric shrubland biome [ENVO:01000218]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____montane shrubland biome [ENVO:01000216]': PermissibleValue(text='____montane shrubland biome [ENVO:01000216]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____temperate shrubland biome [ENVO:01000215]': PermissibleValue(text='____temperate shrubland biome [ENVO:01000215]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tropical shrubland biome [ENVO:01000214]': PermissibleValue(text='____tropical shrubland biome [ENVO:01000214]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____subtropical shrubland biome [ENVO:01000213]': PermissibleValue(text='____subtropical shrubland biome [ENVO:01000213]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______mediterranean shrubland biome [ENVO:01000217]': PermissibleValue(text='______mediterranean shrubland biome [ENVO:01000217]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__woodland biome [ENVO:01000175]': PermissibleValue(text='__woodland biome [ENVO:01000175]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____subtropical woodland biome [ENVO:01000222]': PermissibleValue(text='____subtropical woodland biome [ENVO:01000222]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______mediterranean woodland biome [ENVO:01000208]': PermissibleValue(text='______mediterranean woodland biome [ENVO:01000208]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____temperate woodland biome [ENVO:01000221]': PermissibleValue(text='____temperate woodland biome [ENVO:01000221]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____tropical woodland biome [ENVO:01000220]': PermissibleValue(text='____tropical woodland biome [ENVO:01000220]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____savanna biome [ENVO:01000178]': PermissibleValue(text='____savanna biome [ENVO:01000178]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______montane savanna biome [ENVO:01000223]': PermissibleValue(text='______montane savanna biome [ENVO:01000223]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______flooded savanna biome [ENVO:01000190]': PermissibleValue(text='______flooded savanna biome [ENVO:01000190]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______temperate savanna biome [ENVO:01000189]': PermissibleValue(text='______temperate savanna biome [ENVO:01000189]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______tropical savanna biome [ENVO:01000188]': PermissibleValue(text='______tropical savanna biome [ENVO:01000188]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______subtropical savanna biome [ENVO:01000187]': PermissibleValue(text='______subtropical savanna biome [ENVO:01000187]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________mediterranean savanna biome [ENVO:01000229]': PermissibleValue(text='________mediterranean savanna biome [ENVO:01000229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvMediumSoilEnum': EnumDefinition(name='EnvMediumSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvMediumSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'pathogen-suppressive soil [ENVO:03600036]': PermissibleValue(text='pathogen-suppressive soil [ENVO:03600036]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mangrove biome soil [ENVO:02000138]': PermissibleValue(text='mangrove biome soil [ENVO:02000138]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'surface soil [ENVO:02000059]': PermissibleValue(text='surface soil [ENVO:02000059]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frost-susceptible soil [ENVO:01001638]': PermissibleValue(text='frost-susceptible soil [ENVO:01001638]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bare soil [ENVO:01001616]': PermissibleValue(text='bare soil [ENVO:01001616]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'frozen soil [ENVO:01001526]': PermissibleValue(text='frozen soil [ENVO:01001526]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__friable-frozen soil [ENVO:01001528]': PermissibleValue(text='__friable-frozen soil [ENVO:01001528]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__plastic-frozen soil [ENVO:01001527]': PermissibleValue(text='__plastic-frozen soil [ENVO:01001527]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__hard-frozen soil [ENVO:01001525]': PermissibleValue(text='__hard-frozen soil [ENVO:01001525]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__frozen compost soil [ENVO:00005765]': PermissibleValue(text='__frozen compost soil [ENVO:00005765]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__cryosol [ENVO:00002236]': PermissibleValue(text='__cryosol [ENVO:00002236]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ultisol [ENVO:01001397]': PermissibleValue(text='ultisol [ENVO:01001397]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__acrisol [ENVO:00002234]': PermissibleValue(text='__acrisol [ENVO:00002234]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'acidic soil [ENVO:01001185]': PermissibleValue(text='acidic soil [ENVO:01001185]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bulk soil [ENVO:00005802]': PermissibleValue(text='bulk soil [ENVO:00005802]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'red soil [ENVO:00005790]': PermissibleValue(text='red soil [ENVO:00005790]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'upland soil [ENVO:00005786]': PermissibleValue(text='upland soil [ENVO:00005786]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__mountain forest soil [ENVO:00005769]': PermissibleValue(text='__mountain forest soil [ENVO:00005769]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__dune soil [ENVO:00002260]': PermissibleValue(text='__dune soil [ENVO:00002260]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ornithogenic soil [ENVO:00005782]': PermissibleValue(text='ornithogenic soil [ENVO:00005782]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'heat stressed soil [ENVO:00005781]': PermissibleValue(text='heat stressed soil [ENVO:00005781]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'greenhouse soil [ENVO:00005780]': PermissibleValue(text='greenhouse soil [ENVO:00005780]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical soil [ENVO:00005778]': PermissibleValue(text='tropical soil [ENVO:00005778]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pasture soil [ENVO:00005773]': PermissibleValue(text='pasture soil [ENVO:00005773]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'muddy soil [ENVO:00005771]': PermissibleValue(text='muddy soil [ENVO:00005771]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orchid soil [ENVO:00005768]': PermissibleValue(text='orchid soil [ENVO:00005768]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'manured soil [ENVO:00005767]': PermissibleValue(text='manured soil [ENVO:00005767]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'limed soil [ENVO:00005766]': PermissibleValue(text='limed soil [ENVO:00005766]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pond soil [ENVO:00005764]': PermissibleValue(text='pond soil [ENVO:00005764]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'meadow soil [ENVO:00005761]': PermissibleValue(text='meadow soil [ENVO:00005761]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'burned soil [ENVO:00005760]': PermissibleValue(text='burned soil [ENVO:00005760]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lawn soil [ENVO:00005756]': PermissibleValue(text='lawn soil [ENVO:00005756]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'field soil [ENVO:00005755]': PermissibleValue(text='field soil [ENVO:00005755]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__paddy field soil [ENVO:00005740]': PermissibleValue(text='__paddy field soil [ENVO:00005740]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____peaty paddy field soil [ENVO:00005776]': PermissibleValue(text='____peaty paddy field soil [ENVO:00005776]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____alluvial paddy field soil [ENVO:00005759]': PermissibleValue(text='____alluvial paddy field soil [ENVO:00005759]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fertilized soil [ENVO:00005754]': PermissibleValue(text='fertilized soil [ENVO:00005754]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sawah soil [ENVO:00005752]': PermissibleValue(text='sawah soil [ENVO:00005752]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'jungle soil [ENVO:00005751]': PermissibleValue(text='jungle soil [ENVO:00005751]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'grassland soil [ENVO:00005750]': PermissibleValue(text='grassland soil [ENVO:00005750]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__steppe soil [ENVO:00005777]': PermissibleValue(text='__steppe soil [ENVO:00005777]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__savanna soil [ENVO:00005746]': PermissibleValue(text='__savanna soil [ENVO:00005746]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farm soil [ENVO:00005749]': PermissibleValue(text='farm soil [ENVO:00005749]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__rubber plantation soil [ENVO:00005788]': PermissibleValue(text='__rubber plantation soil [ENVO:00005788]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__orchard soil [ENVO:00005772]': PermissibleValue(text='__orchard soil [ENVO:00005772]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'dry soil [ENVO:00005748]': PermissibleValue(text='dry soil [ENVO:00005748]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'compost soil [ENVO:00005747]': PermissibleValue(text='compost soil [ENVO:00005747]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'roadside soil [ENVO:00005743]': PermissibleValue(text='roadside soil [ENVO:00005743]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'arable soil [ENVO:00005742]': PermissibleValue(text='arable soil [ENVO:00005742]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alpine soil [ENVO:00005741]': PermissibleValue(text='alpine soil [ENVO:00005741]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alluvial soil [ENVO:00002871]': PermissibleValue(text='alluvial soil [ENVO:00002871]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alluvial paddy field soil [ENVO:00005759]': PermissibleValue(text='__alluvial paddy field soil [ENVO:00005759]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__alluvial swamp soil [ENVO:00005758]': PermissibleValue(text='__alluvial swamp soil [ENVO:00005758]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'technosol [ENVO:00002275]': PermissibleValue(text='technosol [ENVO:00002275]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stagnosol [ENVO:00002274]': PermissibleValue(text='stagnosol [ENVO:00002274]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fluvisol [ENVO:00002273]': PermissibleValue(text='fluvisol [ENVO:00002273]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'garden soil [ENVO:00002263]': PermissibleValue(text='garden soil [ENVO:00002263]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__vegetable garden soil [ENVO:00005779]': PermissibleValue(text='__vegetable garden soil [ENVO:00005779]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__allotment garden soil [ENVO:00005744]': PermissibleValue(text='__allotment garden soil [ENVO:00005744]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clay soil [ENVO:00002262]': PermissibleValue(text='clay soil [ENVO:00002262]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forest soil [ENVO:00002261]': PermissibleValue(text='forest soil [ENVO:00002261]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__eucalyptus forest soil [ENVO:00005787]': PermissibleValue(text='__eucalyptus forest soil [ENVO:00005787]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__spruce forest soil [ENVO:00005784]': PermissibleValue(text='__spruce forest soil [ENVO:00005784]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__leafy wood soil [ENVO:00005783]': PermissibleValue(text='__leafy wood soil [ENVO:00005783]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__beech forest soil [ENVO:00005770]': PermissibleValue(text='__beech forest soil [ENVO:00005770]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'agricultural soil [ENVO:00002259]': PermissibleValue(text='agricultural soil [ENVO:00002259]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__bluegrass field soil [ENVO:00005789]': PermissibleValue(text='__bluegrass field soil [ENVO:00005789]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'loam [ENVO:00002258]': PermissibleValue(text='loam [ENVO:00002258]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__clay loam [ENVO:06105277]': PermissibleValue(text='__clay loam [ENVO:06105277]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____silty clay loam [ENVO:06105278]': PermissibleValue(text='____silty clay loam [ENVO:06105278]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____sandy clay loam [ENVO:06105276]': PermissibleValue(text='____sandy clay loam [ENVO:06105276]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__silty loam [ENVO:06105275]': PermissibleValue(text='__silty loam [ENVO:06105275]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__sandy loam [ENVO:06105274]': PermissibleValue(text='__sandy loam [ENVO:06105274]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'podzol [ENVO:00002257]': PermissibleValue(text='podzol [ENVO:00002257]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'regosol [ENVO:00002256]': PermissibleValue(text='regosol [ENVO:00002256]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solonetz [ENVO:00002255]': PermissibleValue(text='solonetz [ENVO:00002255]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vertisol [ENVO:00002254]': PermissibleValue(text='vertisol [ENVO:00002254]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'umbrisol [ENVO:00002253]': PermissibleValue(text='umbrisol [ENVO:00002253]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solonchak [ENVO:00002252]': PermissibleValue(text='solonchak [ENVO:00002252]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'planosol [ENVO:00002251]': PermissibleValue(text='planosol [ENVO:00002251]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plinthosol [ENVO:00002250]': PermissibleValue(text='plinthosol [ENVO:00002250]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'phaeozem [ENVO:00002249]': PermissibleValue(text='phaeozem [ENVO:00002249]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'luvisol [ENVO:00002248]': PermissibleValue(text='luvisol [ENVO:00002248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'nitisol [ENVO:00002247]': PermissibleValue(text='nitisol [ENVO:00002247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ferralsol [ENVO:00002246]': PermissibleValue(text='ferralsol [ENVO:00002246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsisol [ENVO:00002245]': PermissibleValue(text='gypsisol [ENVO:00002245]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gleysol [ENVO:00002244]': PermissibleValue(text='gleysol [ENVO:00002244]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'histosol [ENVO:00002243]': PermissibleValue(text='histosol [ENVO:00002243]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__peat soil [ENVO:00005774]': PermissibleValue(text='__peat soil [ENVO:00005774]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lixisol [ENVO:00002242]': PermissibleValue(text='lixisol [ENVO:00002242]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'leptosol [ENVO:00002241]': PermissibleValue(text='leptosol [ENVO:00002241]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kastanozem [ENVO:00002240]': PermissibleValue(text='kastanozem [ENVO:00002240]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'calcisol [ENVO:00002239]': PermissibleValue(text='calcisol [ENVO:00002239]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'durisol [ENVO:00002238]': PermissibleValue(text='durisol [ENVO:00002238]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chernozem [ENVO:00002237]': PermissibleValue(text='chernozem [ENVO:00002237]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cambisol [ENVO:00002235]': PermissibleValue(text='cambisol [ENVO:00002235]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'albeluvisol [ENVO:00002233]': PermissibleValue(text='albeluvisol [ENVO:00002233]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'andosol [ENVO:00002232]': PermissibleValue(text='andosol [ENVO:00002232]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__volcanic soil [ENVO:01001841]': PermissibleValue(text='__volcanic soil [ENVO:01001841]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'alisol [ENVO:00002231]': PermissibleValue(text='alisol [ENVO:00002231]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anthrosol [ENVO:00002230]': PermissibleValue(text='anthrosol [ENVO:00002230]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'arenosol [ENVO:00002229]': PermissibleValue(text='arenosol [ENVO:00002229]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'EnvLocalScaleSoilEnum': EnumDefinition(name='EnvLocalScaleSoilEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/EnvLocalScaleSoilEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'astronomical body part [ENVO:01000813]': PermissibleValue(text='astronomical body part [ENVO:01000813]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__coast [ENVO:01000687]': PermissibleValue(text='__coast [ENVO:01000687]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__solid astronomical body part [ENVO:00000191]': PermissibleValue(text='__solid astronomical body part [ENVO:00000191]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______landform [ENVO:01001886]': PermissibleValue(text='______landform [ENVO:01001886]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______channel [ENVO:03000117]': PermissibleValue(text='______channel [ENVO:03000117]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________tunnel [ENVO:00000068]': PermissibleValue(text='________tunnel [ENVO:00000068]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______surface landform [ENVO:01001884]': PermissibleValue(text='______surface landform [ENVO:01001884]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________desert [ENVO:01001357]': PermissibleValue(text='________desert [ENVO:01001357]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________outcrop [ENVO:01000302]': PermissibleValue(text='________outcrop [ENVO:01000302]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________boulder field [ENVO:00000537]': PermissibleValue(text='________boulder field [ENVO:00000537]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________landfill [ENVO:00000533]': PermissibleValue(text='________landfill [ENVO:00000533]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________hummock [ENVO:00000516]': PermissibleValue(text='________hummock [ENVO:00000516]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________terrace [ENVO:00000508]': PermissibleValue(text='________terrace [ENVO:00000508]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________peninsula [ENVO:00000305]': PermissibleValue(text='________peninsula [ENVO:00000305]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________shore [ENVO:00000304]': PermissibleValue(text='________shore [ENVO:00000304]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________lake shore [ENVO:00000382]': PermissibleValue(text='__________lake shore [ENVO:00000382]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________dry lake [ENVO:00000277]': PermissibleValue(text='________dry lake [ENVO:00000277]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________karst [ENVO:00000175]': PermissibleValue(text='________karst [ENVO:00000175]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________isthmus [ENVO:00000174]': PermissibleValue(text='________isthmus [ENVO:00000174]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________badland [ENVO:00000127]': PermissibleValue(text='________badland [ENVO:00000127]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________volcanic feature [ENVO:00000094]': PermissibleValue(text='________volcanic feature [ENVO:00000094]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________volcanic cone [ENVO:00000398]': PermissibleValue(text='__________volcanic cone [ENVO:00000398]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________tuff cone [ENVO:01000664]': PermissibleValue(text='____________tuff cone [ENVO:01000664]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________beach [ENVO:00000091]': PermissibleValue(text='________beach [ENVO:00000091]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________plain [ENVO:00000086]': PermissibleValue(text='________plain [ENVO:00000086]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________cave [ENVO:00000067]': PermissibleValue(text='________cave [ENVO:00000067]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________spring [ENVO:00000027]': PermissibleValue(text='________spring [ENVO:00000027]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______slope [ENVO:00002000]': PermissibleValue(text='______slope [ENVO:00002000]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________talus slope [ENVO:01000334]': PermissibleValue(text='________talus slope [ENVO:01000334]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________hillside [ENVO:01000333]': PermissibleValue(text='________hillside [ENVO:01000333]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________levee [ENVO:00000178]': PermissibleValue(text='________levee [ENVO:00000178]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________bank [ENVO:00000141]': PermissibleValue(text='________bank [ENVO:00000141]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________cliff [ENVO:00000087]': PermissibleValue(text='________cliff [ENVO:00000087]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______peak [ENVO:00000480]': PermissibleValue(text='______peak [ENVO:00000480]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______depressed landform [ENVO:00000309]': PermissibleValue(text='______depressed landform [ENVO:00000309]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________geographic basin [ENVO:03000015]': PermissibleValue(text='________geographic basin [ENVO:03000015]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________valley [ENVO:00000100]': PermissibleValue(text='__________valley [ENVO:00000100]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________canyon [ENVO:00000169]': PermissibleValue(text='____________canyon [ENVO:00000169]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dry valley [ENVO:00000128]': PermissibleValue(text='____________dry valley [ENVO:00000128]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________glacial valley [ENVO:00000248]': PermissibleValue(text='____________glacial valley [ENVO:00000248]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________pit [ENVO:01001871]': PermissibleValue(text='________pit [ENVO:01001871]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________trench [ENVO:01000649]': PermissibleValue(text='________trench [ENVO:01000649]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________swale [ENVO:00000543]': PermissibleValue(text='________swale [ENVO:00000543]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________crater [ENVO:00000514]': PermissibleValue(text='________crater [ENVO:00000514]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________impact crater [ENVO:01001071]': PermissibleValue(text='__________impact crater [ENVO:01001071]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________volcanic crater [ENVO:00000246]': PermissibleValue(text='__________volcanic crater [ENVO:00000246]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________caldera [ENVO:00000096]': PermissibleValue(text='__________caldera [ENVO:00000096]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________channel of a watercourse [ENVO:00000395]': PermissibleValue(text='________channel of a watercourse [ENVO:00000395]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________strait [ENVO:00000394]': PermissibleValue(text='__________strait [ENVO:00000394]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________dry stream [ENVO:00000278]': PermissibleValue(text='__________dry stream [ENVO:00000278]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dry river [ENVO:01000995]': PermissibleValue(text='____________dry river [ENVO:01000995]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________artificial channel [ENVO:00000121]': PermissibleValue(text='__________artificial channel [ENVO:00000121]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________plumbing drain [ENVO:01000924]': PermissibleValue(text='____________plumbing drain [ENVO:01000924]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________ditch [ENVO:00000037]': PermissibleValue(text='____________ditch [ENVO:00000037]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________sinkhole [ENVO:00000195]': PermissibleValue(text='________sinkhole [ENVO:00000195]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______elevated landform [ENVO:00000176]': PermissibleValue(text='______elevated landform [ENVO:00000176]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________flattened elevation [ENVO:01001491]': PermissibleValue(text='________flattened elevation [ENVO:01001491]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________butte [ENVO:00000287]': PermissibleValue(text='__________butte [ENVO:00000287]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________plateau [ENVO:00000182]': PermissibleValue(text='__________plateau [ENVO:00000182]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________mesa [ENVO:00000179]': PermissibleValue(text='__________mesa [ENVO:00000179]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________pinnacle [ENVO:00000481]': PermissibleValue(text='________pinnacle [ENVO:00000481]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________mount [ENVO:00000477]': PermissibleValue(text='________mount [ENVO:00000477]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________hill [ENVO:00000083]': PermissibleValue(text='__________hill [ENVO:00000083]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____________dune [ENVO:00000170]': PermissibleValue(text='____________dune [ENVO:00000170]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__________mountain [ENVO:00000081]': PermissibleValue(text='__________mountain [ENVO:00000081]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________ridge [ENVO:00000283]': PermissibleValue(text='________ridge [ENVO:00000283]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____part of a landmass [ENVO:01001781]': PermissibleValue(text='____part of a landmass [ENVO:01001781]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______peninsula [ENVO:00000305]': PermissibleValue(text='______peninsula [ENVO:00000305]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____geological fracture [ENVO:01000667]': PermissibleValue(text='____geological fracture [ENVO:01000667]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______vein [ENVO:01000670]': PermissibleValue(text='______vein [ENVO:01000670]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______geological fault [ENVO:01000668]': PermissibleValue(text='______geological fault [ENVO:01000668]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________active geological fault [ENVO:01000669]': PermissibleValue(text='________active geological fault [ENVO:01000669]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______volcano [ENVO:00000247]': PermissibleValue(text='______volcano [ENVO:00000247]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__field [ENVO:01000352]': PermissibleValue(text='__field [ENVO:01000352]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____lava field [ENVO:01000437]': PermissibleValue(text='____lava field [ENVO:01000437]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____gravel field [ENVO:00000548]': PermissibleValue(text='____gravel field [ENVO:00000548]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____woodland clearing [ENVO:00000444]': PermissibleValue(text='____woodland clearing [ENVO:00000444]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____agricultural field [ENVO:00000114]': PermissibleValue(text='____agricultural field [ENVO:00000114]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____snow field [ENVO:00000146]': PermissibleValue(text='____snow field [ENVO:00000146]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '__geographic feature [ENVO:00000000]': PermissibleValue(text='__geographic feature [ENVO:00000000]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____hydrographic feature [ENVO:00000012]': PermissibleValue(text='____hydrographic feature [ENVO:00000012]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______reef [ENVO:01001899]': PermissibleValue(text='______reef [ENVO:01001899]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______inlet [ENVO:00000475]': PermissibleValue(text='______inlet [ENVO:00000475]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______bar [ENVO:00000167]': PermissibleValue(text='______bar [ENVO:00000167]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________tombolo [ENVO:00000420]': PermissibleValue(text='________tombolo [ENVO:00000420]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '____anthropogenic geographic feature [ENVO:00000002]': PermissibleValue(text='____anthropogenic geographic feature [ENVO:00000002]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______yard [ENVO:03600053]': PermissibleValue(text='______yard [ENVO:03600053]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '________residential backyard [ENVO:03600033]': PermissibleValue(text='________residential backyard [ENVO:03600033]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______market [ENVO:01000987]': PermissibleValue(text='______market [ENVO:01000987]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______park [ENVO:00000562]': PermissibleValue(text='______park [ENVO:00000562]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______well [ENVO:00000026]': PermissibleValue(text='______well [ENVO:00000026]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '______garden [ENVO:00000011]': PermissibleValue(text='______garden [ENVO:00000011]', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'OxyStatSampEnum': EnumDefinition(name='OxyStatSampEnum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OxyStatSampEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='placeholder enum descr, DO NOT SORT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobic': PermissibleValue(text='aerobic', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobic': PermissibleValue(text='anaerobic', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description='placeholder PV descr, DO NOT SORT', meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'filter_type_enum': EnumDefinition(name='filter_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FilterTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'particulate air filter': PermissibleValue(text='particulate air filter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chemical air filter': PermissibleValue(text='chemical air filter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low-MERV pleated media': PermissibleValue(text='low-MERV pleated media', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'HEPA': PermissibleValue(text='HEPA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'electrostatic': PermissibleValue(text='electrostatic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gas-phase or ultraviolet air treatments': PermissibleValue(text='gas-phase or ultraviolet air treatments', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_cond_enum': EnumDefinition(name='window_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_finish_mat_enum': EnumDefinition(name='wall_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'plaster': PermissibleValue(text='plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsum plaster': PermissibleValue(text='gypsum plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'veneer plaster': PermissibleValue(text='veneer plaster', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gypsum board': PermissibleValue(text='gypsum board', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrazzo': PermissibleValue(text='terrazzo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone facing': PermissibleValue(text='stone facing', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'acoustical treatment': PermissibleValue(text='acoustical treatment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'masonry': PermissibleValue(text='masonry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_horiz_pos_enum': EnumDefinition(name='window_horiz_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowHorizPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'left': PermissibleValue(text='left', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'middle': PermissibleValue(text='middle', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'right': PermissibleValue(text='right', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ext_window_orient_enum': EnumDefinition(name='ext_window_orient_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ExtWindowOrientEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast': PermissibleValue(text='northeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast': PermissibleValue(text='southeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest': PermissibleValue(text='southwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest': PermissibleValue(text='northwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_weather_enum': EnumDefinition(name='samp_weather_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampWeatherEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'clear sky': PermissibleValue(text='clear sky', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cloudy': PermissibleValue(text='cloudy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'foggy': PermissibleValue(text='foggy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hail': PermissibleValue(text='hail', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rain': PermissibleValue(text='rain', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'snow': PermissibleValue(text='snow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sleet': PermissibleValue(text='sleet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sunny': PermissibleValue(text='sunny', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'windy': PermissibleValue(text='windy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_cond_enum': EnumDefinition(name='floor_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_mat_enum': EnumDefinition(name='window_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'clad': PermissibleValue(text='clad', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ext_wall_orient_enum': EnumDefinition(name='ext_wall_orient_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ExtWallOrientEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast': PermissibleValue(text='northeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast': PermissibleValue(text='southeast', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest': PermissibleValue(text='southwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest': PermissibleValue(text='northwest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_water_mold_enum': EnumDefinition(name='floor_water_mold_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorWaterMoldEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'mold odor': PermissibleValue(text='mold odor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wet floor': PermissibleValue(text='wet floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water stains': PermissibleValue(text='water stains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall discoloration': PermissibleValue(text='wall discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'floor discoloration': PermissibleValue(text='floor discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ceiling discoloration': PermissibleValue(text='ceiling discoloration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'peeling paint or wallpaper': PermissibleValue(text='peeling paint or wallpaper', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bulging walls': PermissibleValue(text='bulging walls', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'condensation': PermissibleValue(text='condensation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'weekday_enum': EnumDefinition(name='weekday_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WeekdayEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Monday': PermissibleValue(text='Monday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tuesday': PermissibleValue(text='Tuesday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Wednesday': PermissibleValue(text='Wednesday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Thursday': PermissibleValue(text='Thursday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Friday': PermissibleValue(text='Friday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Saturday': PermissibleValue(text='Saturday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sunday': PermissibleValue(text='Sunday', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_cover_enum': EnumDefinition(name='window_cover_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowCoverEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'blinds': PermissibleValue(text='blinds', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'curtains': PermissibleValue(text='curtains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'light_type_enum': EnumDefinition(name='light_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/LightTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'natural light': PermissibleValue(text='natural light', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'electric light': PermissibleValue(text='electric light', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'desk lamp': PermissibleValue(text='desk lamp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flourescent lights': PermissibleValue(text='flourescent lights', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'heat_cool_type_enum': EnumDefinition(name='heat_cool_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HeatCoolTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'radiant system': PermissibleValue(text='radiant system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'heat pump': PermissibleValue(text='heat pump', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forced air system': PermissibleValue(text='forced air system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'steam forced heat': PermissibleValue(text='steam forced heat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood stove': PermissibleValue(text='wood stove', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_loc_enum': EnumDefinition(name='window_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_enum': EnumDefinition(name='door_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'composite': PermissibleValue(text='composite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wooden': PermissibleValue(text='wooden', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_loc_enum': EnumDefinition(name='wall_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'shading_device_type_enum': EnumDefinition(name='shading_device_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ShadingDeviceTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bahama shutters': PermissibleValue(text='bahama shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exterior roll blind': PermissibleValue(text='exterior roll blind', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gambrel awning': PermissibleValue(text='gambrel awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hood awning': PermissibleValue(text='hood awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'porchroller awning': PermissibleValue(text='porchroller awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sarasota shutters': PermissibleValue(text='sarasota shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'slatted aluminum': PermissibleValue(text='slatted aluminum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'solid aluminum awning': PermissibleValue(text='solid aluminum awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sun screen': PermissibleValue(text='sun screen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tree': PermissibleValue(text='tree', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'trellis': PermissibleValue(text='trellis', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'venetian awning': PermissibleValue(text='venetian awning', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_finish_mat_enum': EnumDefinition(name='floor_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood strip or parquet': PermissibleValue(text='wood strip or parquet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carpet': PermissibleValue(text='carpet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rug': PermissibleValue(text='rug', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laminate wood': PermissibleValue(text='laminate wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lineoleum': PermissibleValue(text='lineoleum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl composition tile': PermissibleValue(text='vinyl composition tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sheet vinyl': PermissibleValue(text='sheet vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone': PermissibleValue(text='stone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bamboo': PermissibleValue(text='bamboo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cork': PermissibleValue(text='cork', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'terrazo': PermissibleValue(text='terrazo', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none': PermissibleValue(text='none', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sealed': PermissibleValue(text='sealed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clear finish': PermissibleValue(text='clear finish', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paint': PermissibleValue(text='paint', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'none or unfinished': PermissibleValue(text='none or unfinished', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'substructure_type_enum': EnumDefinition(name='substructure_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SubstructureTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crawlspace': PermissibleValue(text='crawlspace', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'slab on grade': PermissibleValue(text='slab on grade', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'basement': PermissibleValue(text='basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'rel_samp_loc_enum': EnumDefinition(name='rel_samp_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RelSampLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'edge of car': PermissibleValue(text='edge of car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'center of car': PermissibleValue(text='center of car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'under a seat': PermissibleValue(text='under a seat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_type_enum': EnumDefinition(name='room_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'attic': PermissibleValue(text='attic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'closet': PermissibleValue(text='closet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conference room': PermissibleValue(text='conference room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'examining room': PermissibleValue(text='examining room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mail room': PermissibleValue(text='mail room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'private office': PermissibleValue(text='private office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'open office': PermissibleValue(text='open office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stairwell': PermissibleValue(text='stairwell', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), ',restroom': PermissibleValue(text=',restroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lobby': PermissibleValue(text='lobby', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vestibule': PermissibleValue(text='vestibule', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mechanical or electrical room': PermissibleValue(text='mechanical or electrical room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'data center': PermissibleValue(text='data center', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laboratory_wet': PermissibleValue(text='laboratory_wet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'laboratory_dry': PermissibleValue(text='laboratory_dry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gymnasium': PermissibleValue(text='gymnasium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natatorium': PermissibleValue(text='natatorium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'auditorium': PermissibleValue(text='auditorium', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lockers': PermissibleValue(text='lockers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cafe': PermissibleValue(text='cafe', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'warehouse': PermissibleValue(text='warehouse', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'heat_deliv_loc_enum': EnumDefinition(name='heat_deliv_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HeatDelivLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_texture_enum': EnumDefinition(name='wall_texture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallTextureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crows feet': PermissibleValue(text='crows feet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crows-foot stomp': PermissibleValue(text='crows-foot stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '': PermissibleValue(text='', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'double skip': PermissibleValue(text='double skip', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hawk and trowel': PermissibleValue(text='hawk and trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'knockdown': PermissibleValue(text='knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'popcorn': PermissibleValue(text='popcorn', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange peel': PermissibleValue(text='orange peel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rosebud stomp': PermissibleValue(text='rosebud stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Santa-Fe texture': PermissibleValue(text='Santa-Fe texture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'skip trowel': PermissibleValue(text='skip trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'smooth': PermissibleValue(text='smooth', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stomp knockdown': PermissibleValue(text='stomp knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swirl': PermissibleValue(text='swirl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_line_enum': EnumDefinition(name='train_line_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainLineEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'red': PermissibleValue(text='red', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'green': PermissibleValue(text='green', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange': PermissibleValue(text='orange', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'arch_struc_enum': EnumDefinition(name='arch_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ArchStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'building': PermissibleValue(text='building', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shed': PermissibleValue(text='shed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'home': PermissibleValue(text='home', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_cond_enum': EnumDefinition(name='door_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'building_setting_enum': EnumDefinition(name='building_setting_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildingSettingEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'urban': PermissibleValue(text='urban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'suburban': PermissibleValue(text='suburban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exurban': PermissibleValue(text='exurban', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rural': PermissibleValue(text='rural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'specific_enum': EnumDefinition(name='specific_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SpecificEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'operation': PermissibleValue(text='operation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'as built': PermissibleValue(text='as built', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'construction': PermissibleValue(text='construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bid': PermissibleValue(text='bid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'design': PermissibleValue(text='design', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'photos': PermissibleValue(text='photos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_const_type_enum': EnumDefinition(name='wall_const_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallConstTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'frame construction': PermissibleValue(text='frame construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'joisted masonry': PermissibleValue(text='joisted masonry', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'light noncombustible': PermissibleValue(text='light noncombustible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'masonry noncombustible': PermissibleValue(text='masonry noncombustible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'modified fire resistive': PermissibleValue(text='modified fire resistive', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fire resistive': PermissibleValue(text='fire resistive', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'indoor_space_enum': EnumDefinition(name='indoor_space_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IndoorSpaceEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bedroom': PermissibleValue(text='bedroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'foyer': PermissibleValue(text='foyer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'locker room': PermissibleValue(text='locker room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'gender_restroom_enum': EnumDefinition(name='gender_restroom_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GenderRestroomEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'all gender': PermissibleValue(text='all gender', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'female': PermissibleValue(text='female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gender neurtral': PermissibleValue(text='gender neurtral', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male': PermissibleValue(text='male', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male and female': PermissibleValue(text='male and female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'unisex': PermissibleValue(text='unisex', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_type_enum': EnumDefinition(name='window_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'single-hung sash window': PermissibleValue(text='single-hung sash window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'horizontal sash window': PermissibleValue(text='horizontal sash window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fixed window': PermissibleValue(text='fixed window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'mech_struc_enum': EnumDefinition(name='mech_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/MechStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'subway': PermissibleValue(text='subway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'coach': PermissibleValue(text='coach', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carriage': PermissibleValue(text='carriage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'escalator': PermissibleValue(text='escalator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'boat': PermissibleValue(text='boat', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'train': PermissibleValue(text='train', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'car': PermissibleValue(text='car', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bus': PermissibleValue(text='bus', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_wood_enum': EnumDefinition(name='door_type_wood_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeWoodEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bettened and ledged': PermissibleValue(text='bettened and ledged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'battened': PermissibleValue(text='battened', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged and braced': PermissibleValue(text='ledged and braced', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged and framed': PermissibleValue(text='ledged and framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ledged, braced and frame': PermissibleValue(text='ledged, braced and frame', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'framed and paneled': PermissibleValue(text='framed and paneled', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glashed or sash': PermissibleValue(text='glashed or sash', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flush': PermissibleValue(text='flush', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'louvered': PermissibleValue(text='louvered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wire gauged': PermissibleValue(text='wire gauged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'water_feat_type_enum': EnumDefinition(name='water_feat_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WaterFeatTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'fountain': PermissibleValue(text='fountain', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pool': PermissibleValue(text='pool', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'standing feature': PermissibleValue(text='standing feature', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stream': PermissibleValue(text='stream', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'waterfall': PermissibleValue(text='waterfall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_type_metal_enum': EnumDefinition(name='door_type_metal_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorTypeMetalEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'collapsible': PermissibleValue(text='collapsible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'corrugated steel': PermissibleValue(text='corrugated steel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hollow': PermissibleValue(text='hollow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rolling shutters': PermissibleValue(text='rolling shutters', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'steel plate': PermissibleValue(text='steel plate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_connected_enum': EnumDefinition(name='room_connected_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomConnectedEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'attic': PermissibleValue(text='attic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bathroom': PermissibleValue(text='bathroom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'closet': PermissibleValue(text='closet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conference room': PermissibleValue(text='conference room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'elevator': PermissibleValue(text='elevator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'examining room': PermissibleValue(text='examining room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hallway': PermissibleValue(text='hallway', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'kitchen': PermissibleValue(text='kitchen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mail room': PermissibleValue(text='mail room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stairwell': PermissibleValue(text='stairwell', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_loc_enum': EnumDefinition(name='door_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north': PermissibleValue(text='north', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south': PermissibleValue(text='south', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east': PermissibleValue(text='east', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west': PermissibleValue(text='west', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_loc_enum': EnumDefinition(name='room_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'corner room': PermissibleValue(text='corner room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'interior room': PermissibleValue(text='interior room', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'exterior wall': PermissibleValue(text='exterior wall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'window_vert_pos_enum': EnumDefinition(name='window_vert_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WindowVertPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'bottom': PermissibleValue(text='bottom', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'middle': PermissibleValue(text='middle', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'top': PermissibleValue(text='top', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low': PermissibleValue(text='low', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high': PermissibleValue(text='high', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'handidness_enum': EnumDefinition(name='handidness_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HandidnessEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'ambidexterity': PermissibleValue(text='ambidexterity', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'left handedness': PermissibleValue(text='left handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mixed-handedness': PermissibleValue(text='mixed-handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'right handedness': PermissibleValue(text='right handedness', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_mat_enum': EnumDefinition(name='door_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aluminum': PermissibleValue(text='aluminum', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cellular PVC': PermissibleValue(text='cellular PVC', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'engineered plastic': PermissibleValue(text='engineered plastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberboard': PermissibleValue(text='fiberboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'thermoplastic alloy': PermissibleValue(text='thermoplastic alloy', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood/plastic composite': PermissibleValue(text='wood/plastic composite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'quad_pos_enum': EnumDefinition(name='quad_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/QuadPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'North side': PermissibleValue(text='North side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'West side': PermissibleValue(text='West side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'South side': PermissibleValue(text='South side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'East side': PermissibleValue(text='East side', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'season_use_enum': EnumDefinition(name='season_use_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SeasonUseEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Spring': PermissibleValue(text='Spring', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Summer': PermissibleValue(text='Summer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fall': PermissibleValue(text='Fall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Winter': PermissibleValue(text='Winter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_floor_enum': EnumDefinition(name='samp_floor_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampFloorEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'1st floor': PermissibleValue(text='1st floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '2nd floor': PermissibleValue(text='2nd floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'basement': PermissibleValue(text='basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lobby': PermissibleValue(text='lobby', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_direct_enum': EnumDefinition(name='door_direct_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorDirectEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'inward': PermissibleValue(text='inward', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'outward': PermissibleValue(text='outward', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sideways': PermissibleValue(text='sideways', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'surf_air_cont_enum': EnumDefinition(name='surf_air_cont_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SurfAirContEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'dust': PermissibleValue(text='dust', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'organic matter': PermissibleValue(text='organic matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'particulate matter': PermissibleValue(text='particulate matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'volatile organic compounds': PermissibleValue(text='volatile organic compounds', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biological contaminants': PermissibleValue(text='biological contaminants', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'radon': PermissibleValue(text='radon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'nutrients': PermissibleValue(text='nutrients', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biocides': PermissibleValue(text='biocides', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'occup_document_enum': EnumDefinition(name='occup_document_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OccupDocumentEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'automated count': PermissibleValue(text='automated count', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'estimate': PermissibleValue(text='estimate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'manual count': PermissibleValue(text='manual count', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'videos': PermissibleValue(text='videos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_condt_enum': EnumDefinition(name='room_condt_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomCondtEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible signs of mold/mildew': PermissibleValue(text='visible signs of mold/mildew', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_cond_enum': EnumDefinition(name='ceil_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'shading_device_cond_enum': EnumDefinition(name='shading_device_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ShadingDeviceCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_finish_mat_enum': EnumDefinition(name='ceil_finish_mat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilFinishMatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'drywall': PermissibleValue(text='drywall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mineral fibre': PermissibleValue(text='mineral fibre', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tiles': PermissibleValue(text='tiles', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PVC': PermissibleValue(text='PVC', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plasterboard': PermissibleValue(text='plasterboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fiberglass': PermissibleValue(text='fiberglass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mineral wool/calcium silicate': PermissibleValue(text='mineral wool/calcium silicate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'wall_surf_treatment_enum': EnumDefinition(name='wall_surf_treatment_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/WallSurfTreatmentEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'painted': PermissibleValue(text='painted', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall paper': PermissibleValue(text='wall paper', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'no treatment': PermissibleValue(text='no treatment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paneling': PermissibleValue(text='paneling', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'fabric': PermissibleValue(text='fabric', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'furniture_enum': EnumDefinition(name='furniture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FurnitureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cabinet': PermissibleValue(text='cabinet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chair': PermissibleValue(text='chair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'desks': PermissibleValue(text='desks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_texture_enum': EnumDefinition(name='ceil_texture_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilTextureEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'crows feet': PermissibleValue(text='crows feet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crows-foot stomp': PermissibleValue(text='crows-foot stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'double skip': PermissibleValue(text='double skip', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hawk and trowel': PermissibleValue(text='hawk and trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'knockdown': PermissibleValue(text='knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'popcorn': PermissibleValue(text='popcorn', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'orange peel': PermissibleValue(text='orange peel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rosebud stomp': PermissibleValue(text='rosebud stomp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Santa-Fe texture': PermissibleValue(text='Santa-Fe texture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'skip trowel': PermissibleValue(text='skip trowel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'smooth': PermissibleValue(text='smooth', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stomp knockdown': PermissibleValue(text='stomp knockdown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swirl': PermissibleValue(text='swirl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'floor_struc_enum': EnumDefinition(name='floor_struc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FloorStrucEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'balcony': PermissibleValue(text='balcony', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'floating floor': PermissibleValue(text='floating floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glass floor': PermissibleValue(text='glass floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'raised floor': PermissibleValue(text='raised floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sprung floor': PermissibleValue(text='sprung floor', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood-framed': PermissibleValue(text='wood-framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'indoor_surf_enum': EnumDefinition(name='indoor_surf_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IndoorSurfEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cabinet': PermissibleValue(text='cabinet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ceiling': PermissibleValue(text='ceiling', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'counter top': PermissibleValue(text='counter top', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'door': PermissibleValue(text='door', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shelving': PermissibleValue(text='shelving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vent cover': PermissibleValue(text='vent cover', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'window': PermissibleValue(text='window', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wall': PermissibleValue(text='wall', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_stop_loc_enum': EnumDefinition(name='train_stop_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainStopLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'end': PermissibleValue(text='end', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mid': PermissibleValue(text='mid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'downtown': PermissibleValue(text='downtown', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'vis_media_enum': EnumDefinition(name='vis_media_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/VisMediaEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'photos': PermissibleValue(text='photos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'videos': PermissibleValue(text='videos', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commonly of the building': PermissibleValue(text='commonly of the building', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'site context (adjacent buildings, vegetation, terrain, streets)': PermissibleValue(text='site context (adjacent buildings, vegetation, terrain, streets)', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'interiors': PermissibleValue(text='interiors', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'equipment': PermissibleValue(text='equipment', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), '3D scans': PermissibleValue(text='3D scans', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_move_enum': EnumDefinition(name='door_move_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorMoveEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'collapsible': PermissibleValue(text='collapsible', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'folding': PermissibleValue(text='folding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'revolving': PermissibleValue(text='revolving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rolling shutter': PermissibleValue(text='rolling shutter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sliding': PermissibleValue(text='sliding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swinging': PermissibleValue(text='swinging', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'room_samp_pos_enum': EnumDefinition(name='room_samp_pos_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RoomSampPosEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'north corner': PermissibleValue(text='north corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south corner': PermissibleValue(text='south corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'west corner': PermissibleValue(text='west corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'east corner': PermissibleValue(text='east corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northeast corner': PermissibleValue(text='northeast corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'northwest corner': PermissibleValue(text='northwest corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southeast corner': PermissibleValue(text='southeast corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'southwest corner': PermissibleValue(text='southwest corner', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'center': PermissibleValue(text='center', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'surf_material_enum': EnumDefinition(name='surf_material_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SurfMaterialEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'adobe': PermissibleValue(text='adobe', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'carpet': PermissibleValue(text='carpet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cinder blocks': PermissibleValue(text='cinder blocks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concrete': PermissibleValue(text='concrete', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hay bales': PermissibleValue(text='hay bales', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'glass': PermissibleValue(text='glass', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metal': PermissibleValue(text='metal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'paint': PermissibleValue(text='paint', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'plastic': PermissibleValue(text='plastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stainless steel': PermissibleValue(text='stainless steel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stone': PermissibleValue(text='stone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stucco': PermissibleValue(text='stucco', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tile': PermissibleValue(text='tile', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vinyl': PermissibleValue(text='vinyl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood': PermissibleValue(text='wood', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'build_occup_type_enum': EnumDefinition(name='build_occup_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildOccupTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'office': PermissibleValue(text='office', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'market': PermissibleValue(text='market', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'restaurant': PermissibleValue(text='restaurant', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'residence': PermissibleValue(text='residence', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'school': PermissibleValue(text='school', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'residential': PermissibleValue(text='residential', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commercial': PermissibleValue(text='commercial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'low rise': PermissibleValue(text='low rise', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high rise': PermissibleValue(text='high rise', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wood framed': PermissibleValue(text='wood framed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'health care': PermissibleValue(text='health care', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'airport': PermissibleValue(text='airport', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sports complex': PermissibleValue(text='sports complex', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'door_comp_type_enum': EnumDefinition(name='door_comp_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DoorCompTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metal covered': PermissibleValue(text='metal covered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'revolving': PermissibleValue(text='revolving', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sliding': PermissibleValue(text='sliding', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'telescopic': PermissibleValue(text='telescopic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'drawings_enum': EnumDefinition(name='drawings_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DrawingsEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'operation': PermissibleValue(text='operation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'as built': PermissibleValue(text='as built', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'construction': PermissibleValue(text='construction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'bid': PermissibleValue(text='bid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'design': PermissibleValue(text='design', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'building navigation map': PermissibleValue(text='building navigation map', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'diagram': PermissibleValue(text='diagram', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sketch': PermissibleValue(text='sketch', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'train_stat_loc_enum': EnumDefinition(name='train_stat_loc_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TrainStatLocEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'south station above ground': PermissibleValue(text='south station above ground', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south station underground': PermissibleValue(text='south station underground', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'south station amtrak': PermissibleValue(text='south station amtrak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'forest hills': PermissibleValue(text='forest hills', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'riverside': PermissibleValue(text='riverside', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'build_docs_enum': EnumDefinition(name='build_docs_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BuildDocsEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'building information model': PermissibleValue(text='building information model', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commissioning report': PermissibleValue(text='commissioning report', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'complaint logs': PermissibleValue(text='complaint logs', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'contract administration': PermissibleValue(text='contract administration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cost estimate': PermissibleValue(text='cost estimate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'janitorial schedules or logs': PermissibleValue(text='janitorial schedules or logs', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'maintenance plans': PermissibleValue(text='maintenance plans', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'schedule': PermissibleValue(text='schedule', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sections': PermissibleValue(text='sections', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shop drawings': PermissibleValue(text='shop drawings', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'submittals': PermissibleValue(text='submittals', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ventilation system': PermissibleValue(text='ventilation system', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'windows': PermissibleValue(text='windows', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'ceil_type_enum': EnumDefinition(name='ceil_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CeilTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'cathedral': PermissibleValue(text='cathedral', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'dropped': PermissibleValue(text='dropped', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'concave': PermissibleValue(text='concave', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'barrel-shaped': PermissibleValue(text='barrel-shaped', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'coffered': PermissibleValue(text='coffered', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cove': PermissibleValue(text='cove', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'stretched': PermissibleValue(text='stretched', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'int_wall_cond_enum': EnumDefinition(name='int_wall_cond_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/IntWallCondEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'new': PermissibleValue(text='new', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'visible wear': PermissibleValue(text='visible wear', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'needs repair': PermissibleValue(text='needs repair', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'damaged': PermissibleValue(text='damaged', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rupture': PermissibleValue(text='rupture', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'depos_env_enum': EnumDefinition(name='depos_env_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DeposEnvEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Continental - Alluvial': PermissibleValue(text='Continental - Alluvial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Aeolian': PermissibleValue(text='Continental - Aeolian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Fluvial': PermissibleValue(text='Continental - Fluvial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Continental - Lacustrine': PermissibleValue(text='Continental - Lacustrine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Deltaic': PermissibleValue(text='Transitional - Deltaic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Tidal': PermissibleValue(text='Transitional - Tidal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Lagoonal': PermissibleValue(text='Transitional - Lagoonal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Beach': PermissibleValue(text='Transitional - Beach', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Transitional - Lake': PermissibleValue(text='Transitional - Lake', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Shallow': PermissibleValue(text='Marine - Shallow', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Deep': PermissibleValue(text='Marine - Deep', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine - Reef': PermissibleValue(text='Marine - Reef', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Evaporite': PermissibleValue(text='Other - Evaporite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Glacial': PermissibleValue(text='Other - Glacial', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Other - Volcanic': PermissibleValue(text='Other - Volcanic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hc_produced_enum': EnumDefinition(name='hc_produced_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcProducedEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Oil': PermissibleValue(text='Oil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas-Condensate': PermissibleValue(text='Gas-Condensate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas': PermissibleValue(text='Gas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bitumen': PermissibleValue(text='Bitumen', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coalbed Methane': PermissibleValue(text='Coalbed Methane', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'oxy_stat_samp_enum': EnumDefinition(name='oxy_stat_samp_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/OxyStatSampEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'aerobic': PermissibleValue(text='aerobic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'anaerobic': PermissibleValue(text='anaerobic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'lithology_enum': EnumDefinition(name='lithology_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/LithologyEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Basement': PermissibleValue(text='Basement', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chalk': PermissibleValue(text='Chalk', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chert': PermissibleValue(text='Chert', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coal': PermissibleValue(text='Coal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Conglomerate': PermissibleValue(text='Conglomerate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Diatomite': PermissibleValue(text='Diatomite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dolomite': PermissibleValue(text='Dolomite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Limestone': PermissibleValue(text='Limestone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Sandstone': PermissibleValue(text='Sandstone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shale': PermissibleValue(text='Shale', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Siltstone': PermissibleValue(text='Siltstone', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Volcanic': PermissibleValue(text='Volcanic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hcr_geol_age_enum': EnumDefinition(name='hcr_geol_age_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrGeolAgeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Archean': PermissibleValue(text='Archean', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambrian': PermissibleValue(text='Cambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carboniferous': PermissibleValue(text='Carboniferous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cenozoic': PermissibleValue(text='Cenozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cretaceous': PermissibleValue(text='Cretaceous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Devonian': PermissibleValue(text='Devonian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Jurassic': PermissibleValue(text='Jurassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mesozoic': PermissibleValue(text='Mesozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Neogene': PermissibleValue(text='Neogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ordovician': PermissibleValue(text='Ordovician', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleogene': PermissibleValue(text='Paleogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleozoic': PermissibleValue(text='Paleozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permian': PermissibleValue(text='Permian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Precambrian': PermissibleValue(text='Precambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Proterozoic': PermissibleValue(text='Proterozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silurian': PermissibleValue(text='Silurian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Triassic': PermissibleValue(text='Triassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'hcr_enum': EnumDefinition(name='hcr_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HcrEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Oil Reservoir': PermissibleValue(text='Oil Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gas Reservoir': PermissibleValue(text='Gas Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Oil Sand': PermissibleValue(text='Oil Sand', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coalbed': PermissibleValue(text='Coalbed', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Shale': PermissibleValue(text='Shale', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tight Oil Reservoir': PermissibleValue(text='Tight Oil Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Tight Gas Reservoir': PermissibleValue(text='Tight Gas Reservoir', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_subtype_enum': EnumDefinition(name='samp_subtype_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampSubtypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'oil phase': PermissibleValue(text='oil phase', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water phase': PermissibleValue(text='water phase', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'biofilm': PermissibleValue(text='biofilm', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'not applicable': PermissibleValue(text='not applicable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_collect_point_enum': EnumDefinition(name='samp_collect_point_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampCollectPointEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'well': PermissibleValue(text='well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'test well': PermissibleValue(text='test well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'drilling rig': PermissibleValue(text='drilling rig', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'wellhead': PermissibleValue(text='wellhead', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'separator': PermissibleValue(text='separator', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'storage tank': PermissibleValue(text='storage tank', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_dep_env_enum': EnumDefinition(name='sr_dep_env_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrDepEnvEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Lacustine': PermissibleValue(text='Lacustine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluvioldeltaic': PermissibleValue(text='Fluvioldeltaic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluviomarine': PermissibleValue(text='Fluviomarine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Marine': PermissibleValue(text='Marine', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_lithology_enum': EnumDefinition(name='sr_lithology_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrLithologyEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Clastic': PermissibleValue(text='Clastic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carbonate': PermissibleValue(text='Carbonate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Coal': PermissibleValue(text='Coal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Biosilicieous': PermissibleValue(text='Biosilicieous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_kerog_type_enum': EnumDefinition(name='sr_kerog_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrKerogTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Type I': PermissibleValue(text='Type I', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type II': PermissibleValue(text='Type II', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type III': PermissibleValue(text='Type III', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Type IV': PermissibleValue(text='Type IV', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sr_geol_age_enum': EnumDefinition(name='sr_geol_age_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SrGeolAgeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Archean': PermissibleValue(text='Archean', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambrian': PermissibleValue(text='Cambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Carboniferous': PermissibleValue(text='Carboniferous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cenozoic': PermissibleValue(text='Cenozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cretaceous': PermissibleValue(text='Cretaceous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Devonian': PermissibleValue(text='Devonian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Jurassic': PermissibleValue(text='Jurassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Mesozoic': PermissibleValue(text='Mesozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Neogene': PermissibleValue(text='Neogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ordovician': PermissibleValue(text='Ordovician', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleogene': PermissibleValue(text='Paleogene', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Paleozoic': PermissibleValue(text='Paleozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permian': PermissibleValue(text='Permian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Precambrian': PermissibleValue(text='Precambrian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Proterozoic': PermissibleValue(text='Proterozoic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Silurian': PermissibleValue(text='Silurian', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Triassic': PermissibleValue(text='Triassic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'profile_position_enum': EnumDefinition(name='profile_position_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/ProfilePositionEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'summit': PermissibleValue(text='summit', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shoulder': PermissibleValue(text='shoulder', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'backslope': PermissibleValue(text='backslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'footslope': PermissibleValue(text='footslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'toeslope': PermissibleValue(text='toeslope', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'biotic_relationship_enum': EnumDefinition(name='biotic_relationship_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BioticRelationshipEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'free living': PermissibleValue(text='free living', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'parasite': PermissibleValue(text='parasite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'commensal': PermissibleValue(text='commensal', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'symbiont': PermissibleValue(text='symbiont', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'soil_horizon_enum': EnumDefinition(name='soil_horizon_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SoilHorizonEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'O horizon': PermissibleValue(text='O horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'A horizon': PermissibleValue(text='A horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'E horizon': PermissibleValue(text='E horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'B horizon': PermissibleValue(text='B horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'C horizon': PermissibleValue(text='C horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'R layer': PermissibleValue(text='R layer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Permafrost': PermissibleValue(text='Permafrost', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'M horizon': PermissibleValue(text='M horizon', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'drainage_class_enum': EnumDefinition(name='drainage_class_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DrainageClassEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'very poorly': PermissibleValue(text='very poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'poorly': PermissibleValue(text='poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'somewhat poorly': PermissibleValue(text='somewhat poorly', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'moderately well': PermissibleValue(text='moderately well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'well': PermissibleValue(text='well', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'excessively drained': PermissibleValue(text='excessively drained', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'tillage_enum': EnumDefinition(name='tillage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TillageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'drill': PermissibleValue(text='drill', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cutting disc': PermissibleValue(text='cutting disc', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ridge till': PermissibleValue(text='ridge till', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'strip tillage': PermissibleValue(text='strip tillage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'zonal tillage': PermissibleValue(text='zonal tillage', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'chisel': PermissibleValue(text='chisel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tined': PermissibleValue(text='tined', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mouldboard': PermissibleValue(text='mouldboard', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'disc plough': PermissibleValue(text='disc plough', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'cur_land_use_enum': EnumDefinition(name='cur_land_use_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/CurLandUseEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'badlands': PermissibleValue(text='badlands', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cities': PermissibleValue(text='cities', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'conifers': PermissibleValue(text='conifers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='conifers (e.g. pine,spruce,fir,cypress)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='cypress', description=None, object=None), Example(value='fir', description=None, object=None), Example(value='pine', description=None, object=None), Example(value='spruce', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'crop trees': PermissibleValue(text='crop trees', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='crop trees (nuts,fruit,christmas trees,nursery trees)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='christmas trees', description=None, object=None), Example(value='fruit', description=None, object=None), Example(value='nursery trees', description=None, object=None), Example(value='nuts', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farmstead': PermissibleValue(text='farmstead', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'gravel': PermissibleValue(text='gravel', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hardwoods': PermissibleValue(text='hardwoods', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='hardwoods (e.g. oak,hickory,elm,aspen)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='aspen', description=None, object=None), Example(value='elm', description=None, object=None), Example(value='hickory', description=None, object=None), Example(value='oak', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hayland': PermissibleValue(text='hayland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'horticultural plants': PermissibleValue(text='horticultural plants', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='horticultural plants (e.g. tulips)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='tulips', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'industrial areas': PermissibleValue(text='industrial areas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'intermixed hardwood and conifers': PermissibleValue(text='intermixed hardwood and conifers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'marshlands': PermissibleValue(text='marshlands', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='marshlands (grass,sedges,rushes)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='grass', description=None, object=None), Example(value='rushes', description=None, object=None), Example(value='sedgees', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'meadows': PermissibleValue(text='meadows', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='meadows (grasses,alfalfa,fescue,bromegrass,timothy)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='alfalfa', description=None, object=None), Example(value='bromegrass', description=None, object=None), Example(value='fescue', description=None, object=None), Example(value='grasses', description=None, object=None), Example(value='timothy', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mines/quarries': PermissibleValue(text='mines/quarries', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mudflats': PermissibleValue(text='mudflats', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'oil waste areas': PermissibleValue(text='oil waste areas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'pastureland': PermissibleValue(text='pastureland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='pastureland (grasslands used for livestock grazing)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['grasslands used for livestock grazing'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'permanent snow or ice': PermissibleValue(text='permanent snow or ice', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rainforest': PermissibleValue(text='rainforest', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='rainforest (evergreen forest receiving greater than 406 cm annual rainfall)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['evergreen forest receiving greater than 406 cm annual rainfall'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rangeland': PermissibleValue(text='rangeland', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'roads/railroads': PermissibleValue(text='roads/railroads', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'rock': PermissibleValue(text='rock', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'row crops': PermissibleValue(text='row crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'saline seeps': PermissibleValue(text='saline seeps', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'salt flats': PermissibleValue(text='salt flats', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'sand': PermissibleValue(text='sand', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shrub crops': PermissibleValue(text='shrub crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='shrub crops (blueberries,nursery ornamentals,filberts)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='blueberries', description=None, object=None), Example(value='filberts', description=None, object=None), Example(value='nursery ornamentals', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'shrub land': PermissibleValue(text='shrub land', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='shrub land (e.g. mesquite,sage-brush,creosote bush,shrub oak,eucalyptus)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='creosote bush', description=None, object=None), Example(value='eucalyptus', description=None, object=None), Example(value='mesquite', description=None, object=None), Example(value='sage-brush', description=None, object=None), Example(value='shrub oak', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'small grains': PermissibleValue(text='small grains', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'successional shrub land': PermissibleValue(text='successional shrub land', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='successional shrub land (tree saplings,hazels,sumacs,chokecherry,shrub dogwoods,blackberries)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='blackberries', description=None, object=None), Example(value='chokecherry', description=None, object=None), Example(value='hazels', description=None, object=None), Example(value='shrub dogwoods', description=None, object=None), Example(value='sumacs', description=None, object=None), Example(value='tree saplings', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'swamp': PermissibleValue(text='swamp', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='swamp (permanent or semi-permanent water body dominated by woody plants)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['permanent or semi-permanent water body dominated by woody plants'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tropical': PermissibleValue(text='tropical', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='tropical (e.g. mangrove,palms)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='mangrove', description=None, object=None), Example(value='palms', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'tundra': PermissibleValue(text='tundra', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='tundra (mosses,lichens)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='lichens', description=None, object=None), Example(value='mosses', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vegetable crops': PermissibleValue(text='vegetable crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'vine crops': PermissibleValue(text='vine crops', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={'originally': Annotation(tag='originally', value='vine crops (grapes)', extensions={}, annotations={})}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='grapes', description=None, object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'fao_class_enum': EnumDefinition(name='fao_class_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/FaoClassEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Acrisols': PermissibleValue(text='Acrisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Andosols': PermissibleValue(text='Andosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Arenosols': PermissibleValue(text='Arenosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Cambisols': PermissibleValue(text='Cambisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Chernozems': PermissibleValue(text='Chernozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ferralsols': PermissibleValue(text='Ferralsols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Fluvisols': PermissibleValue(text='Fluvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gleysols': PermissibleValue(text='Gleysols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Greyzems': PermissibleValue(text='Greyzems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gypsisols': PermissibleValue(text='Gypsisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Histosols': PermissibleValue(text='Histosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Kastanozems': PermissibleValue(text='Kastanozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Lithosols': PermissibleValue(text='Lithosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Luvisols': PermissibleValue(text='Luvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Nitosols': PermissibleValue(text='Nitosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Phaeozems': PermissibleValue(text='Phaeozems', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Planosols': PermissibleValue(text='Planosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Podzols': PermissibleValue(text='Podzols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Podzoluvisols': PermissibleValue(text='Podzoluvisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Rankers': PermissibleValue(text='Rankers', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Regosols': PermissibleValue(text='Regosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Rendzinas': PermissibleValue(text='Rendzinas', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Solonchaks': PermissibleValue(text='Solonchaks', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Solonetz': PermissibleValue(text='Solonetz', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Vertisols': PermissibleValue(text='Vertisols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Yermosols': PermissibleValue(text='Yermosols', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'plant_sex_enum': EnumDefinition(name='plant_sex_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/PlantSexEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'Androdioecious': PermissibleValue(text='Androdioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androecious': PermissibleValue(text='Androecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androgynous': PermissibleValue(text='Androgynous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Androgynomonoecious': PermissibleValue(text='Androgynomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Andromonoecious': PermissibleValue(text='Andromonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Bisexual': PermissibleValue(text='Bisexual', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dichogamous': PermissibleValue(text='Dichogamous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Diclinous': PermissibleValue(text='Diclinous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Dioecious': PermissibleValue(text='Dioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynodioecious': PermissibleValue(text='Gynodioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynoecious': PermissibleValue(text='Gynoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gynomonoecious': PermissibleValue(text='Gynomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Hermaphroditic': PermissibleValue(text='Hermaphroditic', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Imperfect': PermissibleValue(text='Imperfect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Monoclinous': PermissibleValue(text='Monoclinous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Monoecious': PermissibleValue(text='Monoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Perfect': PermissibleValue(text='Perfect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamodioecious': PermissibleValue(text='Polygamodioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamomonoecious': PermissibleValue(text='Polygamomonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Polygamous': PermissibleValue(text='Polygamous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Protandrous': PermissibleValue(text='Protandrous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Protogynous': PermissibleValue(text='Protogynous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subandroecious': PermissibleValue(text='Subandroecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subdioecious': PermissibleValue(text='Subdioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Subgynoecious': PermissibleValue(text='Subgynoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Synoecious': PermissibleValue(text='Synoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Trimonoecious': PermissibleValue(text='Trimonoecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Trioecious': PermissibleValue(text='Trioecious', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Unisexual': PermissibleValue(text='Unisexual', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_dis_stage_enum': EnumDefinition(name='samp_dis_stage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampDisStageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'dissemination': PermissibleValue(text='dissemination', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'growth and reproduction': PermissibleValue(text='growth and reproduction', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'infection': PermissibleValue(text='infection', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'inoculation': PermissibleValue(text='inoculation', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'penetration': PermissibleValue(text='penetration', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'growth_habit_enum': EnumDefinition(name='growth_habit_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/GrowthHabitEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'erect': PermissibleValue(text='erect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'semi-erect': PermissibleValue(text='semi-erect', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'spreading': PermissibleValue(text='spreading', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'prostrate': PermissibleValue(text='prostrate', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'samp_capt_status_enum': EnumDefinition(name='samp_capt_status_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampCaptStatusEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'active surveillance in response to an outbreak': PermissibleValue(text='active surveillance in response to an outbreak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'active surveillance not initiated by an outbreak': PermissibleValue(text='active surveillance not initiated by an outbreak', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'farm sample': PermissibleValue(text='farm sample', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'market sample': PermissibleValue(text='market sample', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'other': PermissibleValue(text='other', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'biol_stat_enum': EnumDefinition(name='biol_stat_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/BiolStatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'wild': PermissibleValue(text='wild', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural': PermissibleValue(text='natural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'semi-natural': PermissibleValue(text='semi-natural', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'inbred line': PermissibleValue(text='inbred line', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), \"breeder's line\": PermissibleValue(text=\"breeder's line\", description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hybrid': PermissibleValue(text='hybrid', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'clonal selection': PermissibleValue(text='clonal selection', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'mutant': PermissibleValue(text='mutant', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'tidal_stage_enum': EnumDefinition(name='tidal_stage_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/TidalStageEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'low tide': PermissibleValue(text='low tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'ebb tide': PermissibleValue(text='ebb tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'flood tide': PermissibleValue(text='flood tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'high tide': PermissibleValue(text='high tide', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sediment_type_enum': EnumDefinition(name='sediment_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SedimentTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'biogenous': PermissibleValue(text='biogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'cosmogenous': PermissibleValue(text='cosmogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hydrogenous': PermissibleValue(text='hydrogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'lithogenous': PermissibleValue(text='lithogenous', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'host_sex_enum': EnumDefinition(name='host_sex_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/HostSexEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'female': PermissibleValue(text='female', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'hermaphrodite': PermissibleValue(text='hermaphrodite', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'male': PermissibleValue(text='male', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'neuter': PermissibleValue(text='neuter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'analysis_type_enum': EnumDefinition(name='analysis_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/AnalysisTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'metabolomics': PermissibleValue(text='metabolomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metagenomics': PermissibleValue(text='metagenomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metaproteomics': PermissibleValue(text='metaproteomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'metatranscriptomics': PermissibleValue(text='metatranscriptomics', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'natural organic matter': PermissibleValue(text='natural organic matter', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'dna_sample_format_enum': EnumDefinition(name='dna_sample_format_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-DNA': PermissibleValue(text='Gentegra-DNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-RNA': PermissibleValue(text='Gentegra-RNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'rna_sample_format_enum': EnumDefinition(name='rna_sample_format_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/RnaSampleFormatEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'10 mM Tris-HCl': PermissibleValue(text='10 mM Tris-HCl', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'DNAStable': PermissibleValue(text='DNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Ethanol': PermissibleValue(text='Ethanol', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Low EDTA TE': PermissibleValue(text='Low EDTA TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'MDA reaction buffer': PermissibleValue(text='MDA reaction buffer', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'PBS': PermissibleValue(text='PBS', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Pellet': PermissibleValue(text='Pellet', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'RNAStable': PermissibleValue(text='RNAStable', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'TE': PermissibleValue(text='TE', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Water': PermissibleValue(text='Water', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-DNA': PermissibleValue(text='Gentegra-DNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'Gentegra-RNA': PermissibleValue(text='Gentegra-RNA', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'sample_type_enum': EnumDefinition(name='sample_type_enum', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/SampleTypeEnum', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'soil': PermissibleValue(text='soil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None), 'water_extract_soil': PermissibleValue(text='water_extract_soil', description=None, meaning=None, unit=None, is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None)}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}" ; linkml:id "https://example.com/nmdc_submission_schema" ; linkml:types "{'unit': TypeDefinition(name='unit', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Unit', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a string representation of a unit', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[\"why isn't this picked up from the nmdc.yaml import?\"], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['qud:Unit', 'UO:0000000'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal degree': TypeDefinition(name='decimal degree', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DecimalDegree', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a float representation of a degree of rotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='float', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'language code': TypeDefinition(name='language code', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/LanguageCode', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a string representation of a language', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:language', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string': TypeDefinition(name='string', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/String', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A character string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Text'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'integer': TypeDefinition(name='integer', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Integer', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='An integer', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Integer'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='int', uri='xsd:integer', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean': TypeDefinition(name='boolean', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Boolean', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A binary (true or false) value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Boolean'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Bool', uri='xsd:boolean', repr='bool', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'float': TypeDefinition(name='float', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Float', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:float specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Float'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='float', uri='xsd:float', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'double': TypeDefinition(name='double', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Double', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:double specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:Float'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='float', uri='xsd:double', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal': TypeDefinition(name='decimal', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Decimal', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A real number with arbitrary precision that conforms to the xsd:decimal specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=['schema:Number'], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Decimal', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'time': TypeDefinition(name='time', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Time', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A time object represents a (local) time of day, independent of any particular day', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['URI is dateTime because OWL reasoners do not work with straight date or time'], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Time'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date': TypeDefinition(name='date', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Date', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a date (year, month and day) in an idealized calendar', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[\"URI is dateTime because OWL reasoners don't work with straight date or time\"], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Date'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDDate', uri='xsd:date', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'datetime': TypeDefinition(name='datetime', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Datetime', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='The combination of a date and time', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:DateTime'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='XSDDateTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_or_datetime': TypeDefinition(name='date_or_datetime', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/DateOrDatetime', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Either a date or a datetime', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='str', uri='linkml:DateOrDatetime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uriorcurie': TypeDefinition(name='uriorcurie', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Uriorcurie', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='a URI or a CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'curie': TypeDefinition(name='curie', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Curie', local_names={}, conforms_to='https://www.w3.org/TR/curie/', implements=[], extensions={}, annotations={}, description='a compact URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in RDF serializations this MUST be expanded to a URI', 'in non-RDF serializations MAY be serialized as the compact representation'], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='Curie', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uri': TypeDefinition(name='uri', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Uri', local_names={}, conforms_to='https://www.ietf.org/rfc/rfc3987.txt', implements=[], extensions={}, annotations={}, description='a complete URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node'], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:URL'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='URI', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncname': TypeDefinition(name='ncname', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Ncname', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='Prefix part of CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='NCName', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'objectidentifier': TypeDefinition(name='objectidentifier', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Objectidentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A URI or CURIE that represents an object in the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Used for inheritence and type checking'], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='ElementIdentifier', uri='shex:iri', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nodeidentifier': TypeDefinition(name='nodeidentifier', id_prefixes=[], definition_uri='https://example.com/nmdc_sub_schema/Nodeidentifier', local_names={}, conforms_to=None, implements=[], extensions={}, annotations={}, description='A URI, CURIE or BNODE that represents a node in a model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://example.com/nmdc_submission_schema', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, typeof=None, base='NodeIdentifier', uri='shex:nonLiteral', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}" . @@ -652,15 +624,19 @@ nmdc_sub_schema:HcrCoresInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000157 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000438 ], + owl:onProperty MIXS:0000110 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SrDepEnvEnum ; + owl:onProperty MIXS:0000996 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000154 ], + owl:onProperty MIXS:0000150 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -668,201 +644,201 @@ nmdc_sub_schema:HcrCoresInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000408 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000102 ], + owl:onProperty MIXS:0000395 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000300 ], + owl:onProperty MIXS:0000410 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], + owl:onProperty MIXS:0000117 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000410 ], + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SrKerogTypeEnum ; - owl:onProperty MIXS:0000994 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000998 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:HcrGeolAgeEnum ; + owl:onProperty MIXS:0000993 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000099 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000395 ], + owl:onClass nmdc_sub_schema:SampSubtypeEnum ; + owl:onProperty MIXS:0000999 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onClass nmdc_sub_schema:DeposEnvEnum ; + owl:onProperty MIXS:0000992 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000405 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000297 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000290 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000296 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000154 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000408 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000290 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000099 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000393 ], + owl:onProperty MIXS:0000438 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000434 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HcrGeolAgeEnum ; - owl:onProperty MIXS:0000993 ], + owl:onClass nmdc_sub_schema:SrKerogTypeEnum ; + owl:onProperty MIXS:0000994 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000300 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000133 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000211 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onClass nmdc_sub_schema:SrGeolAgeEnum ; + owl:onProperty MIXS:0000997 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000117 ], + owl:onProperty MIXS:0000133 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000135 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000153 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000102 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000407 ], + owl:onProperty MIXS:0000134 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000435 ], + owl:onClass nmdc_sub_schema:LithologyEnum ; + owl:onProperty MIXS:0000990 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000106 ], + owl:onProperty MIXS:0000291 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000431 ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000434 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000409 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000120 ], + owl:onProperty MIXS:0000413 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000419 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000409 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000150 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -870,207 +846,203 @@ nmdc_sub_schema:HcrCoresInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000126 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000127 ], + owl:onProperty MIXS:0000157 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000406 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000211 ], + owl:onProperty MIXS:0000436 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000303 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HcProducedEnum ; - owl:onProperty MIXS:0000989 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000127 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SrLithologyEnum ; + owl:onProperty MIXS:0000995 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000431 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000126 ], + owl:onProperty MIXS:0000296 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000134 ], + owl:onProperty MIXS:0000394 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000105 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampSubtypeEnum ; - owl:onProperty MIXS:0000999 ], + owl:onClass nmdc_sub_schema:HcProducedEnum ; + owl:onProperty MIXS:0000989 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000298 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000297 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000397 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], + owl:onProperty MIXS:0000152 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DeposEnvEnum ; - owl:onProperty MIXS:0000992 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000404 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:LithologyEnum ; - owl:onProperty MIXS:0000990 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000139 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SrLithologyEnum ; - owl:onProperty MIXS:0000995 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000433 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000152 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000291 ], + owl:onClass nmdc_sub_schema:HcrEnum ; + owl:onProperty MIXS:0000988 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000419 ], + owl:onProperty MIXS:0000156 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000433 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000155 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000394 ], + owl:onProperty MIXS:0000435 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000406 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HcrEnum ; - owl:onProperty MIXS:0000988 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000120 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000155 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000303 ], + owl:onProperty MIXS:0000393 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000998 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000407 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000298 ], + owl:onProperty MIXS:0000405 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SrDepEnvEnum ; - owl:onProperty MIXS:0000996 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SrGeolAgeEnum ; - owl:onProperty MIXS:0000997 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000156 ], + owl:onProperty MIXS:0000153 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000413 ], + owl:onProperty MIXS:0000397 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000105 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0000135 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; skos:definition "hcr_cores dh_interface" ; @@ -1085,167 +1057,201 @@ nmdc_sub_schema:HcrFluidsSwabsInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000419 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000102 ], + owl:onProperty MIXS:0000456 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000136 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000407 ], + owl:onProperty MIXS:0000113 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:DeposEnvEnum ; + owl:onProperty MIXS:0000992 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000435 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000397 ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000290 ], + owl:onProperty MIXS:0000157 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000099 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001011 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000454 ], + owl:onProperty MIXS:0001008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000300 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000155 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000298 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000435 ], + owl:onProperty MIXS:0000139 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000397 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000099 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000135 ], + owl:onProperty MIXS:0001012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000431 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000105 ], + owl:onProperty MIXS:0000393 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HcrEnum ; - owl:onProperty MIXS:0000988 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000406 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000453 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000463 ], + owl:onProperty MIXS:0000152 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000153 ], + owl:onProperty MIXS:0000291 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000154 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000296 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000428 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:ecosystem ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000183 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000105 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000297 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SampCollectPointEnum ; + owl:onProperty MIXS:0001015 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001010 ], + owl:onProperty MIXS:0000455 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000154 ], + owl:onProperty MIXS:0000407 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000152 ], + owl:onProperty MIXS:0000126 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampSubtypeEnum ; - owl:onProperty MIXS:0000999 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000290 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000452 ], + owl:onProperty MIXS:0000394 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000157 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000134 ], + owl:onProperty MIXS:0000106 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000419 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:HcProducedEnum ; @@ -1257,31 +1263,31 @@ nmdc_sub_schema:HcrFluidsSwabsInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000156 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001008 ], + owl:onProperty MIXS:0000298 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000408 ], + owl:onProperty MIXS:0000454 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000431 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000455 ], + owl:onClass nmdc_sub_schema:HcrEnum ; + owl:onProperty MIXS:0000988 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000136 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000438 ], + owl:onProperty MIXS:0000463 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -1289,43 +1295,43 @@ nmdc_sub_schema:HcrFluidsSwabsInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000127 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000131 ], + owl:onProperty MIXS:0000452 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000410 ], + owl:onProperty MIXS:0000102 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000156 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampCollectPointEnum ; - owl:onProperty MIXS:0001015 ], + owl:onClass nmdc_sub_schema:SampSubtypeEnum ; + owl:onProperty MIXS:0000999 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0001010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -1333,197 +1339,163 @@ nmdc_sub_schema:HcrFluidsSwabsInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000139 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DeposEnvEnum ; - owl:onProperty MIXS:0000992 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000134 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000412 ], + owl:onProperty MIXS:0000303 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:LithologyEnum ; + owl:onProperty MIXS:0000990 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000303 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000133 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000106 ], + owl:onProperty MIXS:0000120 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000296 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000453 ], + owl:onProperty MIXS:0000117 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000395 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000998 ], + owl:onProperty MIXS:0000131 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000126 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000120 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000155 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HcrGeolAgeEnum ; - owl:onProperty MIXS:0000993 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000133 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000406 ], + owl:onProperty MIXS:0000436 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000300 ], + owl:onProperty MIXS:0000438 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000394 ], + owl:onProperty MIXS:0000410 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000127 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000291 ], + owl:onProperty MIXS:0000150 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000998 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000456 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000153 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0001011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001009 ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000457 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000117 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000395 ], + owl:onProperty MIXS:0000408 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000150 ], + owl:onProperty MIXS:0000135 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001012 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0001009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:LithologyEnum ; - owl:onProperty MIXS:0000990 ], + owl:onClass nmdc_sub_schema:HcrGeolAgeEnum ; + owl:onProperty MIXS:0000993 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000393 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000457 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; skos:definition "hcr_fluids_swabs dh_interface" ; @@ -1545,198 +1517,198 @@ nmdc_sub_schema:MiscEnvsInterface a owl:Class, dcterms:title "Misc Envs" ; rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000435 ], + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000094 ], + owl:onProperty MIXS:0000205 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000504 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000436 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000179 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000162 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000504 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000174 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000178 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000162 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000181 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000203 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000016 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], + owl:onProperty MIXS:0000754 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000094 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000204 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000434 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000184 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000176 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000205 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000184 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000412 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000508 ], + owl:onProperty MIXS:0000174 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000434 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000181 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -1744,75 +1716,75 @@ nmdc_sub_schema:MiscEnvsInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000176 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000177 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000178 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000203 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000179 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000177 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000508 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000204 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty MIXS:0000435 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000093 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; skos:definition "misc_envs dh_interface" ; @@ -1824,21 +1796,20 @@ nmdc_sub_schema:NamedThing a owl:Class, linkml:ClassDefinition ; rdfs:label "NamedThing" ; rdfs:subClassOf [ a owl:Restriction ; + owl:onClass nmdc_sub_schema:Uriorcurie ; + owl:onProperty nmdc_sub_schema:id ; + owl:qualifiedCardinality 1 ], + [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty dcterms:description ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:name ], + owl:allValuesFrom nmdc_sub_schema:Uriorcurie ; + owl:onProperty nmdc_sub_schema:alternative_identifiers ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:alternative_identifiers ], - [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:Uriorcurie ; - owl:onProperty nmdc_sub_schema:id ; - owl:qualifiedCardinality 1 ] ; + owl:onProperty nmdc_sub_schema:name ] ; skos:definition "a databased entity or concept/class" ; linkml:attributes "{}" . @@ -1847,41 +1818,41 @@ nmdc_sub_schema:SampleData a owl:Class, rdfs:label "SampleData" ; dcterms:title "SampleData" ; rdfs:subClassOf [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:PlantAssociatedInterface ; + owl:onProperty nmdc_sub_schema:plant_associated_data ], + [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:WastewaterSludgeInterface ; owl:onProperty nmdc_sub_schema:wastewater_sludge_data ], [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:SedimentInterface ; - owl:onProperty nmdc_sub_schema:sediment_data ], + owl:allValuesFrom nmdc_sub_schema:BuiltEnvInterface ; + owl:onProperty nmdc_sub_schema:built_env_data ], [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:AirInterface ; owl:onProperty nmdc_sub_schema:air_data ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:JgiMtInterface ; - owl:onProperty nmdc_sub_schema:jgi_mt_data ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:JgiMgInterface ; - owl:onProperty nmdc_sub_schema:jgi_mg_data ], [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:WaterInterface ; owl:onProperty nmdc_sub_schema:water_data ], [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:SoilInterface ; owl:onProperty nmdc_sub_schema:soil_data ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:PlantAssociatedInterface ; - owl:onProperty nmdc_sub_schema:plant_associated_data ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:EmslInterface ; - owl:onProperty nmdc_sub_schema:emsl_data ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:BuiltEnvInterface ; - owl:onProperty nmdc_sub_schema:built_env_data ], [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:HostAssociatedInterface ; owl:onProperty nmdc_sub_schema:host_associated_data ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:SedimentInterface ; + owl:onProperty nmdc_sub_schema:sediment_data ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:JgiMgInterface ; + owl:onProperty nmdc_sub_schema:jgi_mg_data ], [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:BiofilmInterface ; - owl:onProperty nmdc_sub_schema:biofilm_data ] ; + owl:onProperty nmdc_sub_schema:biofilm_data ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:EmslInterface ; + owl:onProperty nmdc_sub_schema:emsl_data ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:JgiMtInterface ; + owl:onProperty nmdc_sub_schema:jgi_mt_data ] ; skos:definition "represents data produced by the DataHarmonizer tabs of the submission portal" ; linkml:attributes "{}" . @@ -1894,7 +1865,7 @@ nmdc_sub_schema:air_data a owl:ObjectProperty, nmdc_sub_schema:alternative_identifiers a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "alternative_identifiers" ; - rdfs:range nmdc_sub_schema:String ; + rdfs:range nmdc_sub_schema:Uriorcurie ; skos:definition "A list of alternative identifiers for the entity." . nmdc_sub_schema:ammonium_nitrogen a owl:ObjectProperty, @@ -1923,6 +1894,24 @@ nmdc_sub_schema:built_env_data a owl:ObjectProperty, rdfs:range nmdc_sub_schema:BuiltEnvInterface ; skos:definition "aggregation slot relating built_env data collections to a SampleData container" . +nmdc_sub_schema:dna_absorb1 a owl:ObjectProperty, + linkml:SlotDefinition ; + rdfs:label "dna_absorb1" ; + dcterms:title "DNA absorbance 260/280" ; + rdfs:range nmdc_sub_schema:Float ; + rdfs:subPropertyOf nmdc_sub_schema:biomaterial_purity ; + skos:definition "260/280 measurement of DNA sample purity" ; + linkml:is_a "biomaterial_purity" . + +nmdc_sub_schema:dna_absorb2 a owl:ObjectProperty, + linkml:SlotDefinition ; + rdfs:label "dna_absorb2" ; + dcterms:title "DNA absorbance 260/230" ; + rdfs:range nmdc_sub_schema:Float ; + rdfs:subPropertyOf nmdc_sub_schema:biomaterial_purity ; + skos:definition "260/230 measurement of DNA sample purity" ; + linkml:is_a "biomaterial_purity" . + nmdc_sub_schema:emsl_data a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "emsl_data" ; @@ -2035,6 +2024,24 @@ nmdc_sub_schema:plant_associated_data a owl:ObjectProperty, rdfs:range nmdc_sub_schema:PlantAssociatedInterface ; skos:definition "aggregation slot relating plant_associated data collections to a SampleData container" . +nmdc_sub_schema:rna_absorb1 a owl:ObjectProperty, + linkml:SlotDefinition ; + rdfs:label "rna_absorb1" ; + dcterms:title "RNA absorbance 260/280" ; + rdfs:range nmdc_sub_schema:Float ; + rdfs:subPropertyOf nmdc_sub_schema:biomaterial_purity ; + skos:definition "260/280 measurement of RNA sample purity" ; + linkml:is_a "biomaterial_purity" . + +nmdc_sub_schema:rna_absorb2 a owl:ObjectProperty, + linkml:SlotDefinition ; + rdfs:label "rna_absorb2" ; + dcterms:title "RNA absorbance 260/230" ; + rdfs:range nmdc_sub_schema:Float ; + rdfs:subPropertyOf nmdc_sub_schema:biomaterial_purity ; + skos:definition "260/230 measurement of RNA sample purity" ; + linkml:is_a "biomaterial_purity" . + nmdc_sub_schema:sample_link a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "sample_link" ; @@ -2093,51 +2100,51 @@ nmdc_sub_schema:AirInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000104 ], + owl:onProperty MIXS:0000097 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000098 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000112 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000108 ], + owl:onProperty MIXS:0000096 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000112 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000096 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000094 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -2145,47 +2152,47 @@ nmdc_sub_schema:AirInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000118 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000115 ], + owl:onProperty MIXS:0000756 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000100 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000098 ], + owl:onProperty MIXS:0000114 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000114 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000094 ], + owl:onProperty MIXS:0000118 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -2197,47 +2204,53 @@ nmdc_sub_schema:AirInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000757 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000012 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000756 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000115 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000104 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -2245,53 +2258,47 @@ nmdc_sub_schema:AirInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000097 ], + owl:onProperty MIXS:0000100 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000757 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000108 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000752 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -2317,122 +2324,124 @@ nmdc_sub_schema:BiofilmInterface a owl:Class, linkml:ClassDefinition ; rdfs:label "BiofilmInterface" ; dcterms:title "Biofilm" ; - rdfs:subClassOf [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000137 ], + rdfs:subClassOf [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000533 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000172 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000515 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000172 ], + owl:onProperty MIXS:0000504 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000310 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000180 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000179 ], + owl:onProperty MIXS:0000119 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000503 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000515 ], + owl:onProperty MIXS:0000178 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000508 ], + owl:onProperty MIXS:0000177 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000310 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000119 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000137 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000175 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000101 ], + owl:onProperty MIXS:0000184 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000176 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000204 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000175 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -2440,229 +2449,227 @@ nmdc_sub_schema:BiofilmInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000094 ], + owl:onProperty MIXS:0000173 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000205 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000516 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000182 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000516 ], + owl:onProperty MIXS:0000436 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000503 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000185 ], + owl:onProperty MIXS:0000174 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000162 ], + owl:onProperty MIXS:0000490 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000094 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000101 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], + owl:onProperty MIXS:0000502 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000431 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000174 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000178 ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000173 ], + owl:onProperty MIXS:0000533 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000181 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000204 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000490 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000431 ], + owl:onProperty MIXS:0000498 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000498 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000176 ], + owl:onProperty MIXS:0000185 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000177 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000181 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000184 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000179 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000412 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000191 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000433 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000162 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000530 ], + owl:onProperty MIXS:0000508 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000525 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000180 ], + owl:onProperty MIXS:0000433 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000504 ], + owl:onProperty MIXS:0000530 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000182 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000191 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000434 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000502 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onProperty MIXS:0000525 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000205 ], + owl:onProperty MIXS:0000754 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000434 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -2859,735 +2866,735 @@ nmdc_sub_schema:BuiltEnvInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000143 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000819 ], + owl:onProperty MIXS:0000219 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000772 ], + owl:onProperty MIXS:0000770 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000243 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ExtWallOrientEnum ; - owl:onProperty MIXS:0000817 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0000760 ], + owl:onProperty MIXS:0000158 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowMatEnum ; - owl:onProperty MIXS:0000853 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000167 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000244 ], + owl:onClass nmdc_sub_schema:IndoorSpaceEnum ; + owl:onProperty MIXS:0000763 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000169 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SurfMaterialEnum ; - owl:onProperty MIXS:0000758 ], + owl:onClass nmdc_sub_schema:WindowCoverEnum ; + owl:onProperty MIXS:0000850 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SeasonUseEnum ; - owl:onProperty MIXS:0000830 ], + owl:onClass nmdc_sub_schema:WallSurfTreatmentEnum ; + owl:onProperty MIXS:0000845 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000781 ], + owl:onProperty MIXS:0000144 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RoomSampPosEnum ; - owl:onProperty MIXS:0000824 ], + owl:onClass nmdc_sub_schema:MechStrucEnum ; + owl:onProperty MIXS:0000815 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:CeilTextureEnum ; - owl:onProperty MIXS:0000783 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000799 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000129 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000234 ], + owl:onProperty MIXS:0000122 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Integer ; - owl:onProperty MIXS:0000237 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000800 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorTypeMetalEnum ; - owl:onProperty MIXS:0000796 ], + owl:onClass nmdc_sub_schema:TrainStatLocEnum ; + owl:onProperty MIXS:0000838 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000814 ], + owl:onProperty MIXS:0000246 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000224 ], + owl:onProperty MIXS:0000194 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000756 ], + owl:onProperty MIXS:0000243 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000197 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:QuadPosEnum ; - owl:onProperty MIXS:0000820 ], + owl:onProperty MIXS:0000829 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000143 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:TrainStopLocEnum ; - owl:onProperty MIXS:0000839 ], + owl:onClass nmdc_sub_schema:SeasonUseEnum ; + owl:onProperty MIXS:0000830 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000854 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:CeilCondEnum ; - owl:onProperty MIXS:0000779 ], + owl:onClass nmdc_sub_schema:IndoorSurfEnum ; + owl:onProperty MIXS:0000764 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000221 ], + owl:onProperty MIXS:0000855 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000166 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowCondEnum ; - owl:onProperty MIXS:0000849 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DrawingsEnum ; - owl:onProperty MIXS:0000798 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000124 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WallTextureEnum ; - owl:onProperty MIXS:0000846 ], + owl:onClass nmdc_sub_schema:TrainLineEnum ; + owl:onProperty MIXS:0000837 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000219 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000165 ], + owl:onProperty MIXS:0000221 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000125 ], + owl:onClass nmdc_sub_schema:RoomCondtEnum ; + owl:onProperty MIXS:0000822 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000123 ], + owl:onProperty MIXS:0000242 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000220 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HandidnessEnum ; - owl:onProperty MIXS:0000809 ], + owl:onClass nmdc_sub_schema:TrainStopLocEnum ; + owl:onProperty MIXS:0000839 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000230 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000122 ], + owl:onClass nmdc_sub_schema:WallTextureEnum ; + owl:onProperty MIXS:0000846 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorMoveEnum ; - owl:onProperty MIXS:0000792 ], + owl:onClass nmdc_sub_schema:Integer ; + owl:onProperty MIXS:0000237 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:CeilTypeEnum ; - owl:onProperty MIXS:0000784 ], + owl:onClass nmdc_sub_schema:FloorCondEnum ; + owl:onProperty MIXS:0000803 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000800 ], + owl:onClass nmdc_sub_schema:ExtWindowOrientEnum ; + owl:onProperty MIXS:0000818 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000228 ], + owl:onProperty MIXS:0000793 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000829 ], + owl:onClass nmdc_sub_schema:HandidnessEnum ; + owl:onProperty MIXS:0000809 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FloorWaterMoldEnum ; - owl:onProperty MIXS:0000805 ], + owl:allValuesFrom nmdc_sub_schema:SubstructureTypeEnum ; + owl:onProperty MIXS:0000767 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000223 ], + owl:onClass nmdc_sub_schema:DoorTypeMetalEnum ; + owl:onProperty MIXS:0000796 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000194 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000775 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000197 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowHorizPosEnum ; - owl:onProperty MIXS:0000851 ], + owl:onClass nmdc_sub_schema:WindowCondEnum ; + owl:onProperty MIXS:0000849 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000198 ], + owl:onClass nmdc_sub_schema:DoorMatEnum ; + owl:onProperty MIXS:0000791 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ShadingDeviceCondEnum ; - owl:onProperty MIXS:0000831 ], + owl:allValuesFrom nmdc_sub_schema:BuildOccupTypeEnum ; + owl:onProperty MIXS:0000761 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000773 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:BuildDocsEnum ; - owl:onProperty MIXS:0000787 ], + owl:onProperty MIXS:0000196 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000124 ], + owl:onProperty MIXS:0000224 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RoomTypeEnum ; - owl:onProperty MIXS:0000825 ], + owl:onClass nmdc_sub_schema:WallFinishMatEnum ; + owl:onProperty MIXS:0000842 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampFloorEnum ; - owl:onProperty MIXS:0000828 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000233 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000832 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorMatEnum ; - owl:onProperty MIXS:0000791 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000781 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000217 ], + owl:onProperty MIXS:0000834 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000196 ], + owl:onProperty MIXS:0000814 ], [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:LightTypeEnum ; - owl:onProperty MIXS:0000769 ], + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:DoorMoveEnum ; + owl:onProperty MIXS:0000792 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000094 ], + owl:onProperty MIXS:0000164 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000799 ], + owl:onProperty MIXS:0000170 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:TrainStatLocEnum ; - owl:onProperty MIXS:0000838 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000773 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000142 ], + owl:onProperty MIXS:0000128 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorTypeWoodEnum ; - owl:onProperty MIXS:0000797 ], + owl:onClass nmdc_sub_schema:WallConstTypeEnum ; + owl:onProperty MIXS:0000841 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ArchStrucEnum ; - owl:onProperty MIXS:0000774 ], + owl:onClass nmdc_sub_schema:QuadPosEnum ; + owl:onProperty MIXS:0000820 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000236 ], + owl:onProperty MIXS:0000097 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000144 ], + owl:onProperty MIXS:0000193 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000776 ], + owl:onProperty MIXS:0000782 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000128 ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:BuildOccupTypeEnum ; - owl:onProperty MIXS:0000761 ], + owl:onClass nmdc_sub_schema:WindowTypeEnum ; + owl:onProperty MIXS:0000856 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:GenderRestroomEnum ; owl:onProperty MIXS:0000808 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WallSurfTreatmentEnum ; - owl:onProperty MIXS:0000845 ], + owl:onClass nmdc_sub_schema:HeatDelivLocEnum ; + owl:onProperty MIXS:0000810 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000855 ], + owl:onProperty MIXS:0000233 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:TrainLineEnum ; - owl:onProperty MIXS:0000837 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000166 ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:HeatCoolTypeEnum ; + owl:onProperty MIXS:0000766 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000231 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000226 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000193 ], + owl:onClass nmdc_sub_schema:SampWeatherEnum ; + owl:onProperty MIXS:0000827 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorCompTypeEnum ; - owl:onProperty MIXS:0000795 ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:HeatCoolTypeEnum ; - owl:onProperty MIXS:0000766 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000170 ], + owl:onClass nmdc_sub_schema:FloorStrucEnum ; + owl:onProperty MIXS:0000806 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RoomLocEnum ; - owl:onProperty MIXS:0000823 ], + owl:onClass nmdc_sub_schema:DrawingsEnum ; + owl:onProperty MIXS:0000798 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WallLocEnum ; - owl:onProperty MIXS:0000843 ], + owl:onClass nmdc_sub_schema:CeilCondEnum ; + owl:onProperty MIXS:0000779 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000778 ], + owl:onProperty MIXS:0000785 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:IndoorSurfEnum ; - owl:onProperty MIXS:0000764 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000148 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ShadingDeviceTypeEnum ; - owl:onProperty MIXS:0000835 ], + owl:onClass nmdc_sub_schema:FloorWaterMoldEnum ; + owl:onProperty MIXS:0000805 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000097 ], + owl:onProperty MIXS:0000786 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000145 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000218 ], + owl:onClass nmdc_sub_schema:ShadingDeviceCondEnum ; + owl:onProperty MIXS:0000831 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000833 ], + owl:onProperty MIXS:0000121 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HeatDelivLocEnum ; - owl:onProperty MIXS:0000810 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0000771 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FurnitureEnum ; - owl:onProperty MIXS:0000807 ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:FilterTypeEnum ; - owl:onProperty MIXS:0000765 ], + owl:onClass nmdc_sub_schema:BuildingSettingEnum ; + owl:onProperty MIXS:0000768 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000140 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000844 ], + owl:onProperty MIXS:0000228 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000188 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OccupDocumentEnum ; - owl:onProperty MIXS:0000816 ], + owl:onClass nmdc_sub_schema:RoomConnectedEnum ; + owl:onProperty MIXS:0000826 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FloorCondEnum ; - owl:onProperty MIXS:0000803 ], + owl:onClass nmdc_sub_schema:RelSampLocEnum ; + owl:onProperty MIXS:0000821 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000770 ], + owl:onProperty MIXS:0000232 ], [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:SubstructureTypeEnum ; - owl:onProperty MIXS:0000767 ], + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:ExtWallOrientEnum ; + owl:onProperty MIXS:0000817 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ExtWindowOrientEnum ; - owl:onProperty MIXS:0000818 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000245 ], + owl:onProperty MIXS:0000218 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WaterFeatTypeEnum ; - owl:onProperty MIXS:0000847 ], + owl:onClass nmdc_sub_schema:CeilTypeEnum ; + owl:onProperty MIXS:0000784 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampWeatherEnum ; - owl:onProperty MIXS:0000827 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000802 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:FloorFinishMatEnum ; + owl:onProperty MIXS:0000804 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000227 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:SurfAirContEnum ; - owl:onProperty MIXS:0000759 ], + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000756 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorCondEnum ; - owl:onProperty MIXS:0000788 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000123 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:BuildingSettingEnum ; - owl:onProperty MIXS:0000768 ], + owl:onClass nmdc_sub_schema:WindowLocEnum ; + owl:onProperty MIXS:0000852 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:VisMediaEnum ; - owl:onProperty MIXS:0000840 ], + owl:onClass nmdc_sub_schema:CeilTextureEnum ; + owl:onProperty MIXS:0000783 ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:FilterTypeEnum ; + owl:onProperty MIXS:0000765 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SurfMaterialEnum ; + owl:onProperty MIXS:0000758 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:CeilFinishMatEnum ; + owl:onProperty MIXS:0000780 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000793 ], + owl:onProperty MIXS:0000165 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000216 ], + owl:onClass nmdc_sub_schema:IntWallCondEnum ; + owl:onProperty MIXS:0000813 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000721 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000158 ], + owl:onClass nmdc_sub_schema:WeekdayEnum ; + owl:onProperty MIXS:0000848 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000220 ], + owl:onProperty MIXS:0000225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000121 ], + owl:onProperty MIXS:0000833 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000148 ], + owl:onClass nmdc_sub_schema:WaterFeatTypeEnum ; + owl:onProperty MIXS:0000847 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000230 ], + owl:onProperty MIXS:0000223 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Integer ; - owl:onProperty MIXS:0000235 ], + owl:onClass nmdc_sub_schema:DoorDirectEnum ; + owl:onProperty MIXS:0000789 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000164 ], + owl:onProperty MIXS:0000168 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000195 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000142 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FloorStrucEnum ; - owl:onProperty MIXS:0000806 ], + owl:onClass nmdc_sub_schema:RoomLocEnum ; + owl:onProperty MIXS:0000823 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000785 ], + owl:onProperty MIXS:0000140 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:CeilFinishMatEnum ; - owl:onProperty MIXS:0000780 ], + owl:onClass nmdc_sub_schema:Integer ; + owl:onProperty MIXS:0000235 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000094 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onClass nmdc_sub_schema:DoorTypeWoodEnum ; + owl:onProperty MIXS:0000797 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FloorFinishMatEnum ; - owl:onProperty MIXS:0000804 ], + owl:onClass nmdc_sub_schema:RoomTypeEnum ; + owl:onProperty MIXS:0000825 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RelSampLocEnum ; - owl:onProperty MIXS:0000821 ], + owl:onClass nmdc_sub_schema:RoomSampPosEnum ; + owl:onProperty MIXS:0000824 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000246 ], + owl:onClass nmdc_sub_schema:SpecificEnum ; + owl:onProperty MIXS:0000836 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000195 ], + owl:onProperty MIXS:0000198 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000192 ], + owl:onClass nmdc_sub_schema:BuildDocsEnum ; + owl:onProperty MIXS:0000787 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowLocEnum ; - owl:onProperty MIXS:0000852 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000819 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WallFinishMatEnum ; - owl:onProperty MIXS:0000842 ], + owl:onClass nmdc_sub_schema:WindowVertPosEnum ; + owl:onProperty MIXS:0000857 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowCoverEnum ; - owl:onProperty MIXS:0000850 ], + owl:onClass nmdc_sub_schema:FurnitureEnum ; + owl:onProperty MIXS:0000807 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorTypeEnum ; - owl:onProperty MIXS:0000794 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000812 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorDirectEnum ; - owl:onProperty MIXS:0000789 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000232 ], + owl:onClass nmdc_sub_schema:ShadingDeviceTypeEnum ; + owl:onProperty MIXS:0000835 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000145 ], + owl:onProperty MIXS:0000222 ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:SurfAirContEnum ; + owl:onProperty MIXS:0000759 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000168 ], + owl:onProperty MIXS:0000227 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WeekdayEnum ; - owl:onProperty MIXS:0000848 ], + owl:onClass nmdc_sub_schema:SampFloorEnum ; + owl:onProperty MIXS:0000828 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000238 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000802 ], + owl:onProperty MIXS:0000141 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000229 ], + owl:onProperty MIXS:0000234 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000775 ], + owl:onProperty MIXS:0000236 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000834 ], + owl:onProperty MIXS:0000216 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowTypeEnum ; - owl:onProperty MIXS:0000856 ], + owl:onClass nmdc_sub_schema:DoorTypeEnum ; + owl:onProperty MIXS:0000794 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000812 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000238 ], + owl:onClass nmdc_sub_schema:WindowHorizPosEnum ; + owl:onProperty MIXS:0000851 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000782 ], + owl:onProperty MIXS:0000772 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onClass nmdc_sub_schema:WallLocEnum ; + owl:onProperty MIXS:0000843 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:IndoorSpaceEnum ; - owl:onProperty MIXS:0000763 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000229 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000129 ], + owl:onProperty MIXS:0000244 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000222 ], + owl:onClass nmdc_sub_schema:DoorCompTypeEnum ; + owl:onProperty MIXS:0000795 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onClass nmdc_sub_schema:VisMediaEnum ; + owl:onProperty MIXS:0000840 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WindowVertPosEnum ; - owl:onProperty MIXS:0000857 ], + owl:onClass nmdc_sub_schema:OccupDocumentEnum ; + owl:onProperty MIXS:0000816 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000188 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0000760 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:MechStrucEnum ; - owl:onProperty MIXS:0000815 ], + owl:onProperty MIXS:0000844 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:IntWallCondEnum ; - owl:onProperty MIXS:0000813 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DoorLocEnum ; - owl:onProperty MIXS:0000790 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000777 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000777 ], + owl:onProperty MIXS:0000245 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0000771 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000778 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000786 ], + owl:onProperty MIXS:0000167 ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:LightTypeEnum ; + owl:onProperty MIXS:0000769 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RoomCondtEnum ; - owl:onProperty MIXS:0000822 ], + owl:onClass nmdc_sub_schema:DoorCondEnum ; + owl:onProperty MIXS:0000788 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SpecificEnum ; - owl:onProperty MIXS:0000836 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000217 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000214 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:WallConstTypeEnum ; - owl:onProperty MIXS:0000841 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000192 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:DoorLocEnum ; + owl:onProperty MIXS:0000790 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:RoomConnectedEnum ; - owl:onProperty MIXS:0000826 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000169 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000225 ], + owl:onProperty MIXS:0000776 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000242 ], + owl:onProperty MIXS:0000125 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000832 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:WindowMatEnum ; + owl:onProperty MIXS:0000853 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000854 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:ArchStrucEnum ; + owl:onProperty MIXS:0000774 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000141 ], + owl:onProperty MIXS:0000721 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000231 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -4305,47 +4312,47 @@ nmdc_sub_schema:EmslInterface a owl:Class, linkml:ClassDefinition ; rdfs:label "EmslInterface" ; dcterms:title "Emsl" ; - rdfs:subClassOf [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], - [ a owl:Restriction ; + rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Integer ; - owl:onProperty ], - [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty ; + owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:Integer ; - owl:onProperty ], - [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:SampleTypeEnum ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onClass nmdc_sub_schema:Integer ; + owl:onProperty ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:OxyStatSampEnum ; owl:onProperty MIXS:0000753 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ; + owl:onProperty ; + owl:qualifiedCardinality 1 ], + [ a owl:Restriction ; + owl:onClass nmdc_sub_schema:SampleTypeEnum ; + owl:onProperty ; owl:qualifiedCardinality 1 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; @@ -5973,123 +5980,129 @@ nmdc_sub_schema:HostAssociatedInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000260 ], + owl:onProperty MIXS:0000365 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onClass nmdc_sub_schema:BiolStatEnum ; + owl:onProperty MIXS:0000858 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000258 ], + owl:onProperty MIXS:0000867 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000247 ], + owl:onProperty MIXS:0000859 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000871 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000247 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000250 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000259 ], + owl:onProperty MIXS:0000257 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000258 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000874 ], + owl:onClass nmdc_sub_schema:HostSexEnum ; + owl:onProperty MIXS:0000811 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000875 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000866 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000869 ], + owl:onProperty MIXS:0000872 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000255 ], + owl:onProperty MIXS:0000256 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:HostSexEnum ; - owl:onProperty MIXS:0000811 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000255 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000870 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000261 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000263 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000248 ], + owl:onProperty MIXS:0000888 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000874 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -6097,43 +6110,39 @@ nmdc_sub_schema:HostAssociatedInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000274 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000252 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000870 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000866 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:BiolStatEnum ; - owl:onProperty MIXS:0000858 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000754 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000251 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000264 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000888 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:SampCaptStatusEnum ; @@ -6141,43 +6150,43 @@ nmdc_sub_schema:HostAssociatedInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000252 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000869 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000259 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0001298 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001318 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000260 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000263 ], + owl:onProperty MIXS:0000871 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -6185,69 +6194,67 @@ nmdc_sub_schema:HostAssociatedInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000859 ], + owl:onProperty MIXS:0000264 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000861 ], + owl:onProperty MIXS:0000875 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000256 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000251 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000103 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SampDisStageEnum ; + owl:onProperty MIXS:0000249 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000365 ], + owl:onProperty MIXS:0000261 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001298 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000248 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0001318 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000250 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000867 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampDisStageEnum ; - owl:onProperty MIXS:0000249 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000861 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000257 ], + owl:onProperty MIXS:0000274 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000872 ], + owl:onProperty MIXS:0000093 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -6369,91 +6376,91 @@ nmdc_sub_schema:JgiMgInterface a owl:Class, linkml:ClassDefinition ; rdfs:label "JgiMgInterface" ; dcterms:title "JGI MG" ; - rdfs:subClassOf [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + rdfs:subClassOf [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:DnaSampleFormatEnum ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:YesNoEnum ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:OxyStatSampEnum ; owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onClass nmdc_sub_schema:Float ; + owl:onProperty ; + owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:Float ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:JgiContTypeEnum ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ], + owl:onProperty nmdc_sub_schema:dna_absorb2 ], [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty nmdc_sub_schema:dna_absorb1 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ; + owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:DnaSampleFormatEnum ; + owl:onProperty ; + owl:qualifiedCardinality 1 ], + [ a owl:Restriction ; + owl:onClass nmdc_sub_schema:JgiContTypeEnum ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; @@ -6467,90 +6474,90 @@ nmdc_sub_schema:JgiMtInterface a owl:Class, rdfs:label "JgiMtInterface" ; dcterms:title "JGI MT" ; rdfs:subClassOf [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:RnaSampleFormatEnum ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:YesNoEnum ; + owl:onProperty ; + owl:qualifiedCardinality 1 ], + [ a owl:Restriction ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ; owl:qualifiedCardinality 1 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ; + owl:qualifiedCardinality 1 ], + [ a owl:Restriction ; + owl:onClass nmdc_sub_schema:RnaSampleFormatEnum ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty ; + owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:YesNoEnum ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:JgiContTypeEnum ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty nmdc_sub_schema:rna_absorb2 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], - [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:JgiContTypeEnum ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onClass nmdc_sub_schema:Float ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:Float ; - owl:onProperty ], + owl:onProperty nmdc_sub_schema:rna_absorb1 ], [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], - [ a owl:Restriction ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; - owl:qualifiedCardinality 1 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ; + owl:onProperty ; owl:qualifiedCardinality 1 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin ; @@ -6688,21 +6695,37 @@ nmdc_sub_schema:PlantAssociatedInterface a owl:Class, rdfs:label "PlantAssociatedInterface" ; dcterms:title "Plant Associated" ; rdfs:subClassOf [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:SampDisStageEnum ; + owl:onProperty MIXS:0000249 ], + [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000365 ], + owl:onProperty MIXS:0000754 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000263 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000009 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0001041 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000577 ], + owl:onProperty MIXS:0000247 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001062 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000556 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -6710,361 +6733,345 @@ nmdc_sub_schema:PlantAssociatedInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000264 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000874 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000553 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000570 ], + owl:onProperty MIXS:0000573 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000551 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001052 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000591 ], + owl:onProperty MIXS:0000590 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001056 ], + owl:onProperty MIXS:0001298 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000551 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0001057 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000247 ], + owl:onProperty MIXS:0001069 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001057 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000365 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001043 ], + owl:onProperty MIXS:0000553 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:SampCaptStatusEnum ; + owl:onProperty MIXS:0000860 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000590 ], + owl:onProperty MIXS:0000251 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001038 ], + owl:onProperty MIXS:0000571 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0001040 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001061 ], + owl:onProperty MIXS:0000567 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000558 ], + owl:onProperty MIXS:0001318 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:PlantSexEnum ; - owl:onProperty MIXS:0001059 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001069 ], + owl:onProperty MIXS:0000559 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001063 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000251 ], + owl:onProperty MIXS:0001068 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000573 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:BiolStatEnum ; - owl:onProperty MIXS:0000858 ], + owl:onProperty MIXS:0001060 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000578 ], + owl:onProperty MIXS:0000577 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000559 ], + owl:onProperty MIXS:0000580 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001041 ], + owl:onProperty MIXS:0000264 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001298 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000591 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000557 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000581 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000257 ], + owl:onProperty MIXS:0001043 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000568 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000255 ], + owl:onProperty MIXS:0000874 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampCaptStatusEnum ; - owl:onProperty MIXS:0000860 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000578 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000248 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000859 ], + owl:onProperty MIXS:0001063 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000255 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0001058 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001060 ], + owl:onClass nmdc_sub_schema:BiolStatEnum ; + owl:onProperty MIXS:0000858 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000561 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001040 ], + owl:onProperty MIXS:0000570 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000558 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000569 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001318 ], + owl:onProperty MIXS:0000556 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0001052 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000576 ], + owl:onProperty MIXS:0000555 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000582 ], + owl:onProperty MIXS:0001061 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000569 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000561 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SampDisStageEnum ; - owl:onProperty MIXS:0000249 ], + owl:onProperty MIXS:0000560 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000250 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000567 ], + owl:onProperty MIXS:0001062 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000571 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000581 ], + owl:onProperty MIXS:0000256 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000557 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:GrowthHabitEnum ; - owl:onProperty MIXS:0001044 ], + owl:onProperty MIXS:0000579 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000576 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000256 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000263 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000580 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001068 ], + owl:onProperty MIXS:0000859 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000257 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000568 ], + owl:onProperty MIXS:0001070 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty MIXS:0000582 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onClass nmdc_sub_schema:PlantSexEnum ; + owl:onProperty MIXS:0001059 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000560 ], + owl:onProperty MIXS:0000250 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000555 ], + owl:onProperty MIXS:0001056 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000579 ], + owl:onProperty MIXS:0001038 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001070 ], + owl:onProperty MIXS:0000248 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onClass nmdc_sub_schema:GrowthHabitEnum ; + owl:onProperty MIXS:0001044 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000016 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -7657,171 +7664,179 @@ nmdc_sub_schema:SedimentInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000162 ], + owl:onProperty MIXS:0000175 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000515 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000178 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000178 ], + owl:onProperty MIXS:0000498 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000533 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onClass nmdc_sub_schema:SedimentTypeEnum ; + owl:onProperty MIXS:0001078 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000502 ], + owl:onProperty MIXS:0001107 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000530 ], + owl:onProperty MIXS:0000516 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000191 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000754 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000173 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000185 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000026 ], + [ a owl:Restriction ; + owl:maxQualifiedCardinality 1 ; + owl:onClass nmdc_sub_schema:TidalStageEnum ; + owl:onProperty MIXS:0000750 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000310 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000177 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000503 ], + owl:onProperty MIXS:0000434 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000634 ], + owl:onProperty MIXS:0000431 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000176 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000310 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000503 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000434 ], + owl:onProperty MIXS:0000119 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000184 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000435 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000211 ], + owl:onProperty MIXS:0000204 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000176 ], + owl:onProperty MIXS:0000504 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000137 ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000508 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000179 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000175 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -7829,57 +7844,51 @@ nmdc_sub_schema:SedimentInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000179 ], + owl:onProperty MIXS:0000211 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:TidalStageEnum ; - owl:onProperty MIXS:0000750 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000119 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000181 ], + owl:onProperty MIXS:0000184 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000502 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000182 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -7887,139 +7896,137 @@ nmdc_sub_schema:SedimentInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000185 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], - [ a owl:Restriction ; - owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SedimentTypeEnum ; - owl:onProperty MIXS:0001078 ], + owl:onProperty MIXS:0000525 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000504 ], + owl:onProperty MIXS:0000191 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000435 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000101 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty MIXS:0000173 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000206 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000530 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000490 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000516 ], + owl:onProperty MIXS:0000433 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000433 ], + owl:onProperty MIXS:0000137 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000525 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000431 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000182 ], + owl:onProperty MIXS:0000436 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000101 ], + owl:onProperty MIXS:0000174 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000634 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000180 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000412 ], + owl:onProperty MIXS:0000177 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000498 ], + owl:onProperty MIXS:0000181 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000515 ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty MIXS:0000162 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000204 ], + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000508 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000180 ], + owl:onProperty MIXS:0000206 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000172 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000013 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000533 ], + owl:onProperty MIXS:0000490 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000174 ], + owl:onProperty MIXS:0000172 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000014 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -8152,19 +8159,19 @@ nmdc_sub_schema:SoilInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000647 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000525 ], + owl:onClass nmdc_sub_schema:ProfilePositionEnum ; + owl:onProperty MIXS:0001084 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000322 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -8172,452 +8179,452 @@ nmdc_sub_schema:SoilInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000533 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000318 ], + owl:onProperty nmdc_sub_schema:ammonium_nitrogen ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000117 ], + owl:onProperty MIXS:0000644 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000736 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000329 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:lbceq ], + owl:onProperty MIXS:0000643 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000332 ], + owl:onProperty nmdc_sub_schema:lbc_thirty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000335 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty nmdc_sub_schema:zinc ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000330 ], + [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:TillageEnum ; + owl:onProperty MIXS:0001081 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onClass nmdc_sub_schema:SoilHorizonEnum ; + owl:onProperty MIXS:0001082 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000533 ], + owl:onProperty MIXS:0000650 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000320 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000591 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000650 ], + owl:onClass nmdc_sub_schema:BioticRelationshipEnum ; + owl:onProperty MIXS:0000028 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000569 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000323 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000204 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000607 ], + owl:onProperty MIXS:0000525 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:BioticRelationshipEnum ; - owl:onProperty MIXS:0000028 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000314 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000646 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000639 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001038 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onClass nmdc_sub_schema:FaoClassEnum ; + owl:onProperty MIXS:0001083 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ammonium_nitrogen ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000338 ], + owl:onProperty MIXS:0000735 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000343 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000735 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:ProfilePositionEnum ; - owl:onProperty MIXS:0001084 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:manganese ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty MIXS:0000558 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000334 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:manganese ], + owl:onProperty MIXS:0000341 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:SoilHorizonEnum ; - owl:onProperty MIXS:0001082 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000324 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000558 ], + owl:onProperty MIXS:0000607 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; owl:onProperty MIXS:0000551 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:DrainageClassEnum ; - owl:onProperty MIXS:0001085 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000320 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000646 ], + owl:onProperty MIXS:0000117 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000339 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000337 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000319 ], + owl:onProperty MIXS:0000645 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000331 ], + owl:onProperty MIXS:0001043 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000316 ], + owl:onProperty MIXS:0000327 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000327 ], + owl:onProperty MIXS:0000652 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty nmdc_sub_schema:nitrate_nitrogen ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000569 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000336 ], + owl:onProperty MIXS:0000318 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001040 ], + owl:onProperty MIXS:0001038 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001043 ], + owl:onProperty MIXS:0000339 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:CurLandUseEnum ; - owl:onProperty MIXS:0001080 ], + owl:onClass nmdc_sub_schema:DrainageClassEnum ; + owl:onProperty MIXS:0001085 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000328 ], + owl:onProperty MIXS:0000316 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000341 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:zinc ], + owl:onProperty MIXS:0000568 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], - [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:TillageEnum ; - owl:onProperty MIXS:0001081 ], + owl:onProperty MIXS:0000332 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0001040 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000312 ], + owl:onProperty MIXS:0000736 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000315 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000310 ], + owl:onProperty MIXS:0000185 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000323 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000645 ], + owl:onProperty nmdc_sub_schema:lbceq ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000530 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty MIXS:0000204 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000319 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000642 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000322 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000530 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:nitrate_nitrogen ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000644 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000639 ], + owl:onProperty MIXS:0000328 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001086 ], + owl:onProperty MIXS:0000310 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000643 ], + owl:onClass nmdc_sub_schema:CurLandUseEnum ; + owl:onProperty MIXS:0001080 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000591 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000335 ], + owl:onProperty MIXS:0000338 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:nitrite_nitrogen ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty nmdc_sub_schema:nitrite_nitrogen ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:FaoClassEnum ; - owl:onProperty MIXS:0001083 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0001086 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty MIXS:0000331 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000647 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000642 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000334 ], + owl:onProperty MIXS:0000324 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000568 ], + owl:onProperty MIXS:0000312 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000315 ], + owl:onProperty MIXS:0000343 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:lbc_thirty ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000336 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000652 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000185 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000314 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000329 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000337 ], + owl:onProperty ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin, @@ -8636,67 +8643,67 @@ nmdc_sub_schema:SoilMixsInspiredMixin a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty ], linkml:mixin ; skos:definition "Mixin with SoilMixsInspired Terms" ; linkml:attributes "{}" . @@ -9169,14 +9176,6 @@ nmdc_sub_schema:SoilMixsInspiredMixin a owl:Class, nmdc_sub_schema:TrainStopLocEnum ; rdfs:label "mid" . -nmdc_sub_schema:Uriorcurie a owl:Class, - linkml:TypeDefinition ; - rdfs:label "uriorcurie" ; - rdfs:subClassOf [ a owl:Restriction ; - owl:onDataRange xsd:anyURI ; - owl:onProperty linkml:topValue ; - owl:qualifiedCardinality 1 ] . - a owl:Class, nmdc_sub_schema:VisMediaEnum ; rdfs:label "3D scans" . @@ -9376,221 +9375,221 @@ nmdc_sub_schema:WastewaterSludgeInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000665 ], + owl:onProperty MIXS:0000664 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000215 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000653 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000350 ], + owl:onProperty MIXS:0000351 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000349 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000672 ], + owl:onProperty MIXS:0000661 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000689 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000660 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty MIXS:0000353 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000352 ], + owl:onProperty MIXS:0000102 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000656 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000669 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000215 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000754 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0000352 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000349 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000673 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000664 ], + owl:onProperty MIXS:0000656 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000348 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000657 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000662 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000662 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000348 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000102 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000689 ], + owl:onProperty MIXS:0000665 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000657 ], + owl:onProperty MIXS:0000350 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000351 ], + owl:onProperty MIXS:0000017 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; @@ -9598,31 +9597,31 @@ nmdc_sub_schema:WastewaterSludgeInterface a owl:Class, [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000669 ], + owl:onProperty MIXS:0000672 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000660 ], + owl:onProperty MIXS:0000673 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000653 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000353 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000661 ], + owl:onProperty MIXS:0000321 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -9659,421 +9658,421 @@ nmdc_sub_schema:WaterInterface a owl:Class, rdfs:subClassOf [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000172 ], + owl:onProperty MIXS:0000434 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000175 ], + owl:onProperty MIXS:0000719 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000014 ], + owl:onProperty MIXS:0000503 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000490 ], + owl:onProperty MIXS:0000728 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000103 ], + owl:onProperty MIXS:0000203 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000183 ], + owl:onProperty MIXS:0000184 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000498 ], + owl:onProperty MIXS:0000176 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem ], + owl:onProperty MIXS:0000505 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000116 ], + owl:onProperty MIXS:0000706 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000429 ], + owl:onProperty nmdc_sub_schema:ecosystem_subtype ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000008 ], + owl:onProperty MIXS:0000423 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000725 ], + owl:onProperty MIXS:0000427 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000016 ], + owl:onProperty MIXS:0000116 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000436 ], + owl:onProperty MIXS:0000432 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000738 ], + owl:onProperty MIXS:0000515 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000178 ], + owl:onProperty MIXS:0000102 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000432 ], + owl:onProperty MIXS:0000182 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000017 ], + owl:onProperty MIXS:0000428 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000698 ], + owl:onProperty MIXS:0000173 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:TidalStageEnum ; - owl:onProperty MIXS:0000750 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000011 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000755 ], + owl:onProperty MIXS:0000435 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000174 ], + owl:onProperty MIXS:0000741 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001225 ], + owl:onProperty MIXS:0000426 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000719 ], + owl:onProperty MIXS:0000162 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000001 ], + owl:onProperty nmdc_sub_schema:specific_ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000110 ], + owl:onProperty MIXS:0000012 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000508 ], + owl:onProperty MIXS:0000751 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000177 ], + owl:onProperty MIXS:0000429 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000176 ], + owl:onProperty ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000741 ], + owl:onProperty MIXS:0000744 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000113 ], + owl:onProperty MIXS:0000738 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000002 ], + owl:onProperty MIXS:0000137 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000412 ], + owl:onProperty MIXS:0000736 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000205 ], + owl:onProperty MIXS:0000008 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000018 ], + owl:onProperty MIXS:0000752 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000736 ], + owl:onProperty MIXS:0000725 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000181 ], + owl:onProperty MIXS:0000498 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000751 ], + owl:onProperty MIXS:0000014 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000179 ], + owl:onProperty MIXS:0000683 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000182 ], + owl:onProperty MIXS:0000110 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000421 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000013 ], + owl:onProperty MIXS:0000010 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000184 ], + owl:onProperty nmdc_sub_schema:ecosystem ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000013 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000754 ], + owl:onProperty MIXS:0000310 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000106 ], + owl:onProperty MIXS:0000178 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000424 ], + owl:onProperty MIXS:0000174 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty ], + owl:onProperty MIXS:0000321 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000426 ], + owl:onProperty MIXS:0000735 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000137 ], + owl:onProperty MIXS:0000704 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:Double ; - owl:onProperty MIXS:0001001 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000508 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000683 ], + owl:onProperty MIXS:0000009 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000298 ], + owl:onProperty MIXS:0000684 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000505 ], + owl:onProperty MIXS:0000298 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:OxyStatSampEnum ; - owl:onProperty MIXS:0000753 ], + owl:onClass nmdc_sub_schema:String ; + owl:onProperty MIXS:0000692 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000093 ], + owl:onProperty nmdc_sub_schema:env_package ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000430 ], + owl:onProperty MIXS:0000179 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000435 ], + owl:onProperty MIXS:0000175 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000752 ], + owl:onProperty MIXS:0000183 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000504 ], + owl:onProperty MIXS:0000754 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000009 ], + owl:onProperty MIXS:0000181 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_subtype ], + owl:onProperty MIXS:0001097 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_type ], + owl:onProperty MIXS:0000698 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000427 ], + owl:onProperty MIXS:0000177 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000119 ], + owl:onProperty MIXS:0000204 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000011 ], + owl:onProperty nmdc_sub_schema:ecosystem_category ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000010 ], - [ a owl:Class ; - owl:intersectionOf ( [ a owl:Restriction ; - owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; - owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], + owl:onProperty MIXS:0000424 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001097 ], + owl:onProperty MIXS:0000103 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000704 ], + owl:onClass nmdc_sub_schema:Double ; + owl:onProperty MIXS:0001001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:ecosystem_category ], + owl:onProperty MIXS:0000703 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000706 ], + owl:onProperty MIXS:0000436 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000102 ], + owl:onProperty MIXS:0001106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000728 ], + owl:onProperty MIXS:0000412 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000692 ], + owl:onProperty MIXS:0000502 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000634 ], + owl:onProperty MIXS:0000516 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000744 ], + owl:onProperty MIXS:0000430 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000425 ], + owl:onProperty MIXS:0000016 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000310 ], + owl:onProperty MIXS:0000205 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000204 ], + owl:onProperty MIXS:0000018 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000747 ], + owl:onProperty MIXS:0000106 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000502 ], + owl:onProperty MIXS:0000755 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000173 ], + owl:onProperty MIXS:0000425 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000423 ], + owl:onClass nmdc_sub_schema:OxyStatSampEnum ; + owl:onProperty MIXS:0000753 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000745 ], + owl:onProperty MIXS:0000634 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000503 ], + owl:onProperty nmdc_sub_schema:ecosystem_type ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000321 ], + owl:onProperty MIXS:0000180 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000012 ], + owl:onProperty MIXS:0000017 ], + [ a owl:Class ; + owl:intersectionOf ( [ a owl:Restriction ; + owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; + owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000735 ], + owl:onProperty MIXS:0000191 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000703 ], + owl:onProperty MIXS:0000002 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000203 ], + owl:onProperty MIXS:0000490 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000162 ], + owl:onProperty MIXS:0000001 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:env_package ], + owl:onProperty MIXS:0000504 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; - owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000684 ], + owl:onClass nmdc_sub_schema:TidalStageEnum ; + owl:onProperty MIXS:0000750 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000428 ], + owl:onProperty MIXS:0001225 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000516 ], + owl:onProperty MIXS:0000745 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000434 ], + owl:onProperty MIXS:0000433 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0000093 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000191 ], + owl:onProperty MIXS:0000172 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000515 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000433 ], + owl:onProperty MIXS:0000119 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001106 ], + owl:onProperty MIXS:0000421 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000180 ], + owl:onProperty MIXS:0000113 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty nmdc_sub_schema:specific_ecosystem ], + owl:onProperty MIXS:0000747 ], nmdc_sub_schema:DhInterface, nmdc_sub_schema:DhMultiviewCommonColumnsMixin, nmdc_sub_schema:SampIdNewTermsMixin ; @@ -15620,6 +15619,19 @@ nmdc_sub_schema:StoreCondEnum a owl:Class, , . +nmdc_sub_schema:Uriorcurie a owl:Class, + linkml:TypeDefinition ; + rdfs:label "uriorcurie" ; + rdfs:subClassOf [ a owl:Restriction ; + owl:onDataRange xsd:anyURI ; + owl:onProperty linkml:topValue ; + owl:qualifiedCardinality 1 ] . + +nmdc_sub_schema:biomaterial_purity a owl:ObjectProperty, + linkml:SlotDefinition ; + rdfs:label "biomaterial_purity" ; + rdfs:range nmdc_sub_schema:String . + MIXS:0000101 a owl:ObjectProperty, linkml:SlotDefinition ; rdfs:label "methane" ; @@ -17741,8 +17753,8 @@ nmdc_sub_schema:DnaSampleFormatEnum a owl:Class, linkml:EnumDefinition ; rdfs:label "DnaSampleFormatEnum", "dna_sample_format_enum" ; - owl:unionOf ( ), - ( ) ; + owl:unionOf ( ), + ( ) ; linkml:permissible_values , , , @@ -17860,17 +17872,17 @@ nmdc_sub_schema:DhMultiviewCommonColumnsMixin a owl:Class, rdfs:subClassOf [ a owl:Class ; owl:intersectionOf ( [ a owl:Restriction ; owl:allValuesFrom nmdc_sub_schema:AnalysisTypeEnum ; - owl:onProperty ] [ a owl:Restriction ; - owl:onProperty ; + owl:onProperty ] [ a owl:Restriction ; + owl:onProperty ; owl:someValuesFrom nmdc_sub_schema:AnalysisTypeEnum ] ) ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0001107 ], + owl:onProperty MIXS:0000026 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:String ; - owl:onProperty MIXS:0000026 ], + owl:onProperty MIXS:0001107 ], [ a owl:Restriction ; owl:maxQualifiedCardinality 1 ; owl:onClass nmdc_sub_schema:OxyStatSampEnum ; diff --git a/sheets_and_friends/tsv_in/import_slots_regardless.tsv b/sheets_and_friends/tsv_in/import_slots_regardless.tsv index de0e7df0..bcfe6a44 100644 --- a/sheets_and_friends/tsv_in/import_slots_regardless.tsv +++ b/sheets_and_friends/tsv_in/import_slots_regardless.tsv @@ -1,551 +1,551 @@ source class source file or URL slot section column order destination class -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml abs_air_humidity mixs_core_section 61 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml add_recov_method mixs_core_section 289 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml additional_info mixs_core_section 290 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml address mixs_core_section 62 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml adj_room mixs_core_section 63 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml aero_struc mixs_core_section 64 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml agrochem_addition mixs_section 2 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml air_PM_concen mixs_core_section 48 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml air_temp mixs_core_section 65 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml air_temp_regm mixs_modified_section 16 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml al_sat mixs_section 3 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml al_sat_meth mixs_section 4 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml alkalinity mixs_core_section 1 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml alkalinity_method mixs_core_section 218 HcrCoresInterface|HcrFluidsSwabsInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml alkyl_diethers mixs_core_section 2 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml alt mixs_modified_section 26 AirInterface|BiofilmInterface|BuiltEnvInterface|HostAssociatedInterface|MiscEnvsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml aminopept_act mixs_core_section 3 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ammonium mixs_core_section 4 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ammonium_nitrogen mixs_inspired_section 1005 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml amount_light mixs_core_section 66 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml analysis_type sample_id_section 3 DhMultiviewCommonColumnsMixin -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ances_data mixs_core_section 237 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml annual_precpt mixs_section 5 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml annual_temp mixs_section 6 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml antibiotic_regm mixs_core_section 238 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml api mixs_core_section 291 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml arch_struc mixs_core_section 67 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml aromatics_pc mixs_core_section 292 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml asphaltenes_pc mixs_core_section 293 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml atmospheric_data mixs_core_section 219 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml avg_dew_point mixs_core_section 68 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml avg_occup mixs_core_section 69 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml avg_temp mixs_core_section 70 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bac_prod mixs_core_section 220 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bac_resp mixs_core_section 221 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bacteria_carb_prod mixs_core_section 5 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml barometric_press mixs_core_section 49 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml basin mixs_core_section 294 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bathroom_count mixs_core_section 71 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bedroom_count mixs_core_section 72 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml benzene mixs_core_section 295 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biochem_oxygen_dem mixs_core_section 296 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biocide mixs_core_section 297 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biocide_admin_method mixs_core_section 298 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biol_stat mixs_core_section 239 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biomass mixs_core_section 6 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biotic_regm mixs_modified_section 13 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml biotic_relationship mixs_modified_section 22 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bishomohopanol mixs_core_section 7 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml blood_press_diast mixs_core_section 299 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml blood_press_syst mixs_core_section 300 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml bromide mixs_core_section 8 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml build_docs mixs_core_section 73 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml build_occup_type mixs_core_section 74 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml building_setting mixs_core_section 75 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_age mixs_core_section 76 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_set mixs_core_section 77 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_type mixs_core_section 78 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml calcium mixs_core_section 9 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml carb_dioxide mixs_core_section 50 AirInterface|BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml carb_monoxide mixs_core_section 51 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml carb_nitro_ratio mixs_section 44 BiofilmInterface|SedimentInterface|SoilInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_area mixs_core_section 79 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_cond mixs_core_section 80 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_finish_mat mixs_core_section 81 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_struc mixs_core_section 82 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_texture mixs_core_section 83 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_thermal_mass mixs_core_section 84 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_type mixs_core_section 85 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ceil_water_mold mixs_core_section 86 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chem_administration mixs_modified_section 17 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chem_mutagen mixs_core_section 240 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chem_oxygen_dem mixs_core_section 301 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chem_treat_method mixs_core_section 302 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chem_treatment mixs_core_section 303 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chloride mixs_core_section 10 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml chlorophyll mixs_core_section 11 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml climate_environment mixs_modified_section 19 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml collection_date mixs_modified_section 3 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml collection_date_inc mixs_inspired_section 2 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml collection_time mixs_inspired_section 1 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml collection_time_inc mixs_inspired_section 3 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml conduc mixs_core_section 222 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml cool_syst_id mixs_core_section 87 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml crop_rotation mixs_section 7 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml cult_root_med mixs_core_section 241 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml cur_land_use mixs_section 8 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml cur_vegetation mixs_section 9 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml cur_vegetation_meth mixs_section 10 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml date_last_rain mixs_core_section 88 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml density mixs_core_section 12 HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml depos_env mixs_core_section 304 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml depth mixs_modified_section 9 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dew_point mixs_core_section 89 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diether_lipids mixs_core_section 13 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_carb_dioxide mixs_core_section 14 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_hydrogen mixs_core_section 15 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_carb mixs_core_section 16 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_nitro mixs_core_section 223 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_phosp mixs_core_section 224 HcrCoresInterface|HcrFluidsSwabsInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_iron mixs_core_section 305 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_org_carb mixs_core_section 17 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_org_nitro mixs_core_section 18 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_oxygen mixs_core_section 19 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml diss_oxygen_fluid mixs_core_section 306 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_absorb1 jgi_metagenomics_section 7 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_absorb2 jgi_metagenomics_section 8 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_concentration jgi_metagenomics_section 5 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_cont_type jgi_metagenomics_section 10 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_cont_well jgi_metagenomics_section 11 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_container_id jgi_metagenomics_section 9 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_dnase jgi_metagenomics_section 13 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_isolate_meth jgi_metagenomics_section 16 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_project_contact jgi_metagenomics_section 18 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_samp_id jgi_metagenomics_section 3 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_sample_format jgi_metagenomics_section 12 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_sample_name jgi_metagenomics_section 4 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project jgi_metagenomics_section 1 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project_name jgi_metagenomics_section 2 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project_pi jgi_metagenomics_section 17 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dna_volume jgi_metagenomics_section 6 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml dnase_rna jgi_metatranscriptomics_section 13 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_comp_type mixs_core_section 90 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_cond mixs_core_section 91 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_direct mixs_core_section 92 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_loc mixs_core_section 93 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_mat mixs_core_section 94 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_move mixs_core_section 95 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_size mixs_core_section 96 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_type mixs_core_section 97 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_type_metal mixs_core_section 98 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_type_wood mixs_core_section 99 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml door_water_mold mixs_core_section 100 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml down_par mixs_core_section 225 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml drainage_class mixs_section 11 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml drawings mixs_core_section 101 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem sample_id_section 9 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_category sample_id_section 10 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_subtype sample_id_section 12 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_type sample_id_section 11 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml efficiency_percent mixs_core_section 307 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml elev mixs_modified_section 6 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml elevator mixs_core_section 102 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml emsl_store_temp emsl_section 4 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml emulsions mixs_core_section 308 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml env_broad_scale sample_id_section 6 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml env_local_scale sample_id_section 7 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml env_medium sample_id_section 8 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml env_package sample_id_section 4 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml escalator mixs_core_section 103 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ethylbenzene mixs_core_section 309 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml exp_duct mixs_core_section 104 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml exp_pipe mixs_core_section 105 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml experimental_factor mixs_section 12 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml experimental_factor_other mixs_inspired_section 7 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ext_door mixs_core_section 106 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ext_wall_orient mixs_core_section 107 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ext_window_orient mixs_core_section 108 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml extreme_event mixs_section 13 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fao_class mixs_section 14 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fertilizer_regm mixs_core_section 242 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml field mixs_core_section 310 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml filter_method mixs_inspired_section 6 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml filter_type mixs_core_section 109 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fire mixs_section 15 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fireplace_type mixs_core_section 110 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml flooding mixs_section 16 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_age mixs_core_section 111 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_area mixs_core_section 112 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_cond mixs_core_section 113 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_count mixs_core_section 114 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_finish_mat mixs_core_section 115 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_struc mixs_core_section 116 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_thermal_mass mixs_core_section 117 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml floor_water_mold mixs_core_section 118 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fluor mixs_core_section 226 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml freq_clean mixs_core_section 119 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml freq_cook mixs_core_section 120 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml fungicide_regm mixs_core_section 243 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml furniture mixs_core_section 121 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml gaseous_environment mixs_modified_section 20 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml gaseous_substances mixs_core_section 311 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml gender_restroom mixs_core_section 122 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml genetic_mod mixs_core_section 244 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml geo_loc_name mixs_modified_section 4 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml glucosidase_act mixs_core_section 20 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml gravidity mixs_core_section 312 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml gravity mixs_core_section 245 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml growth_facil mixs_modified_section 1 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml growth_habit mixs_core_section 246 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml growth_hormone_regm mixs_core_section 247 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hall_count mixs_core_section 123 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml handidness mixs_core_section 124 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hc_produced mixs_core_section 313 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hcr mixs_core_section 314 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hcr_fw_salinity mixs_core_section 315 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hcr_geol_age mixs_core_section 316 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hcr_pressure mixs_core_section 317 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml hcr_temp mixs_core_section 318 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heat_cool_type mixs_core_section 125 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heat_deliv_loc mixs_core_section 126 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heat_sys_deliv_meth mixs_core_section 127 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heat_system_id mixs_core_section 128 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heavy_metals mixs_section 17 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml heavy_metals_meth mixs_section 18 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml height_carper_fiber mixs_core_section 129 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml herbicide_regm mixs_core_section 248 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml horizon_meth mixs_section 19 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_age mixs_core_section 249 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_body_habitat mixs_core_section 319 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_body_product mixs_core_section 320 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_body_site mixs_core_section 321 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_body_temp mixs_core_section 322 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_color mixs_core_section 323 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_common_name mixs_core_section 250 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_diet mixs_core_section 324 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_dry_mass mixs_core_section 251 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_family_relation mixs_core_section 325 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_genotype mixs_core_section 252 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_growth_cond mixs_core_section 326 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_height mixs_core_section 253 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_last_meal mixs_core_section 327 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_length mixs_core_section 254 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_life_stage mixs_core_section 255 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_phenotype mixs_core_section 256 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_sex mixs_core_section 328 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_shape mixs_core_section 329 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_subject_id mixs_core_section 330 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_subspecf_genlin mixs_core_section 257 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_substrate mixs_core_section 331 HostAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_symbiont mixs_core_section 258 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_taxid mixs_core_section 259 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_tot_mass mixs_core_section 260 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml host_wet_mass mixs_core_section 261 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml humidity mixs_core_section 52 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml humidity_regm mixs_modified_section 21 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml indoor_space mixs_core_section 130 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml indoor_surf mixs_core_section 131 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml indust_eff_percent mixs_core_section 332 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml inorg_particles mixs_core_section 333 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml inside_lux mixs_core_section 132 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml int_wall_cond mixs_core_section 133 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml isotope_exposure mixs_inspired_section 16 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml iw_bt_date_well mixs_core_section 334 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml iwf mixs_core_section 335 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml last_clean mixs_core_section 134 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml lat_lon mixs_modified_section 5 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml lbc_thirty mixs_inspired_section 1001 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml lbceq mixs_inspired_section 1002 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml light_intensity mixs_core_section 227 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml light_regm mixs_modified_section 24 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml light_type mixs_core_section 135 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml link_class_info mixs_section 20 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml link_climate_info mixs_section 21 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml lithology mixs_core_section 336 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml local_class mixs_section 22 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml local_class_meth mixs_section 24 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml magnesium mixs_core_section 21 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|SedimentInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml manganese mixs_inspired_section 1003 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml max_occup mixs_core_section 136 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml mean_frict_vel mixs_core_section 22 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml mean_peak_frict_vel mixs_core_section 23 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml mech_struc mixs_core_section 137 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml mechanical_damage mixs_core_section 262 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml methane mixs_core_section 24 AirInterface|BiofilmInterface|SedimentInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml micro_biomass_c_meth mixs_inspired_section 11 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml micro_biomass_c_meth mixs_inspired_section 1004 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml micro_biomass_meth mixs_section 43 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml micro_biomass_n_meth mixs_inspired_section 13 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml micro_biomass_n_meth mixs_inspired_section 1004 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml microbial_biomass mixs_section 42 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml microbial_biomass_c mixs_inspired_section 10 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml microbial_biomass_c mixs_inspired_section 1004 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml microbial_biomass_n mixs_inspired_section 12 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml microbial_biomass_n mixs_inspired_section 1004 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml mineral_nutr_regm mixs_core_section 263 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml misc_param mixs_section 23 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml n_alkanes mixs_core_section 25 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml nitrate mixs_core_section 26 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml nitrate_nitrogen mixs_inspired_section 1006 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml nitrite mixs_core_section 27 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml nitrite_nitrogen mixs_inspired_section 1007 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml nitro mixs_core_section 28 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml non_microb_biomass mixs_inspired_section 8 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml non_microb_biomass_method mixs_inspired_section 9 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml non_min_nutr_regm mixs_core_section 264 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml number_pets mixs_core_section 138 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml number_plants mixs_core_section 139 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml number_resident mixs_core_section 140 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml occup_density_samp mixs_core_section 141 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml occup_document mixs_core_section 142 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml occup_samp mixs_core_section 143 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_carb mixs_core_section 29 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_count_qpcr_info mixs_core_section 337 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_matter mixs_section 45 BiofilmInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_nitro mixs_section 46 BiofilmInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_nitro_method mixs_inspired_section 14 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml org_particles mixs_core_section 338 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml organism_count mixs_core_section 30 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml other_treatment mixs_inspired_section 15 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml owc_tvdss mixs_core_section 339 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml oxy_stat_samp mixs_section 25 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml oxygen mixs_core_section 53 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml part_org_carb mixs_core_section 31 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml part_org_nitro mixs_core_section 228 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml particle_class mixs_core_section 32 SedimentInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml permeability mixs_core_section 340 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml perturbation mixs_core_section 33 AirInterface|BiofilmInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pesticide_regm mixs_core_section 265 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml petroleum_hydrocarb mixs_core_section 34 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ph mixs_modified_section 27 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ph_meth mixs_section 41 SoilInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ph_regm mixs_core_section 266 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml phaeopigments mixs_core_section 35 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml phosphate mixs_section 53 BiofilmInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml phosplipid_fatt_acid mixs_core_section 36 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml photon_flux mixs_core_section 229 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml plant_growth_med mixs_core_section 267 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml plant_product mixs_core_section 268 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml plant_sex mixs_core_section 269 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml plant_struc mixs_core_section 270 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pollutants mixs_core_section 54 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml porosity mixs_core_section 37 HcrCoresInterface|SedimentInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml potassium mixs_core_section 38 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pour_point mixs_core_section 341 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pre_treatment mixs_core_section 342 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pres_animal_insect mixs_core_section 144 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml pressure mixs_core_section 39 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml prev_land_use_meth mixs_section 26 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml previous_land_use mixs_section 27 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml primary_prod mixs_core_section 230 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml primary_treatment mixs_core_section 343 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml prod_rate mixs_core_section 344 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml prod_start_date mixs_core_section 345 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml profile_position mixs_section 28 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml project_id emsl_section 1 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml proposal_dna jgi_metagenomics_section 19 JgiMgInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml proposal_rna jgi_metatranscriptomics_section 19 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml quad_pos mixs_core_section 145 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml radiation_regm mixs_core_section 271 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rainfall_regm mixs_core_section 272 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml reactor_type mixs_core_section 346 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml redox_potential mixs_core_section 40 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rel_air_humidity mixs_core_section 146 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rel_humidity_out mixs_core_section 147 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rel_samp_loc mixs_core_section 148 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml replicate_number emsl_section 6 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml reservoir mixs_core_section 347 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml resins_pc mixs_core_section 348 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_absorb1 jgi_metatranscriptomics_section 7 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_absorb2 jgi_metatranscriptomics_section 8 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_concentration jgi_metatranscriptomics_section 5 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_cont_type jgi_metatranscriptomics_section 10 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_cont_well jgi_metatranscriptomics_section 11 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_container_id jgi_metatranscriptomics_section 9 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_isolate_meth jgi_metatranscriptomics_section 16 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_project_contact jgi_metatranscriptomics_section 18 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_samp_id jgi_metatranscriptomics_section 3 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_sample_format jgi_metatranscriptomics_section 12 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_sample_name jgi_metatranscriptomics_section 4 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_seq_project jgi_metatranscriptomics_section 1 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_seq_project_name jgi_metatranscriptomics_section 2 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_seq_project_pi jgi_metatranscriptomics_section 17 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml rna_volume jgi_metatranscriptomics_section 6 JgiMtInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_air_exch_rate mixs_core_section 149 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_architec_elem mixs_core_section 150 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_condt mixs_core_section 151 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_connected mixs_core_section 152 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_count mixs_core_section 153 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_dim mixs_core_section 154 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_door_dist mixs_core_section 155 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_door_share mixs_core_section 156 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_hallway mixs_core_section 157 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_loc mixs_core_section 158 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_moist_dam_hist mixs_core_section 159 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_net_area mixs_core_section 160 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_occup mixs_core_section 161 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_samp_pos mixs_core_section 162 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_type mixs_core_section 163 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_vol mixs_core_section 164 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_wall_share mixs_core_section 165 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml room_window_count mixs_core_section 166 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_cond mixs_core_section 273 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_carbon mixs_core_section 274 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_macronutr mixs_core_section 275 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_micronutr mixs_core_section 276 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_ph mixs_core_section 277 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_regl mixs_core_section 278 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_solid mixs_core_section 279 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml root_med_suppl mixs_core_section 280 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml salinity mixs_section 54 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml salinity_meth mixs_section 55 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml salt_regm mixs_core_section 281 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_capt_status mixs_core_section 282 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_collec_device mixs_modified_section 14 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_collec_method mixs_modified_section 15 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_collect_point mixs_core_section 349 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_dis_stage mixs_core_section 283 HostAssociatedInterface|PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_floor mixs_core_section 167 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_loc_corr_rate mixs_core_section 350 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_mat_process mixs_modified_section 12 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_md mixs_core_section 351 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_name sample_id_section 1 DhMultiviewCommonColumnsMixin -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_preserv mixs_core_section 352 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_room_id mixs_core_section 168 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_size mixs_modified_section 18 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_sort_meth mixs_core_section 169 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_dur mixs_core_section 353 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_loc mixs_core_section 41 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_temp mixs_modified_section 7 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_subtype mixs_core_section 354 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_time_out mixs_core_section 170 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_transport_cond mixs_core_section 355 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_tvdss mixs_core_section 356 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_type mixs_core_section 357 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_weather mixs_core_section 171 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml samp_well_name mixs_core_section 358 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sample_link sample_id_section 5 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sample_shipped emsl_section 3 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sample_type emsl_section 2 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml saturates_pc mixs_core_section 359 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml season mixs_core_section 172 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml season_environment mixs_core_section 284 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml season_precpt mixs_section 29 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml season_temp mixs_section 30 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml season_use mixs_core_section 173 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml secondary_treatment mixs_core_section 360 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sediment_type mixs_core_section 42 SedimentInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sewage_type mixs_core_section 361 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml shad_dev_water_mold mixs_core_section 174 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_cond mixs_core_section 175 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_loc mixs_core_section 176 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_mat mixs_core_section 177 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_type mixs_core_section 178 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sieving mixs_modified_section 8 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml silicate mixs_core_section 43 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml size_frac mixs_core_section 285 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml size_frac_low mixs_modified_section 10 SoilInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml size_frac_up mixs_modified_section 11 SoilInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml slope_aspect mixs_section 1 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml slope_gradient mixs_section 31 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sludge_retent_time mixs_core_section 362 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sodium mixs_core_section 363 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soil_horizon mixs_section 32 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soil_text_measure mixs_section 33 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soil_texture_meth mixs_section 34 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soil_type mixs_section 35 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soil_type_meth mixs_section 36 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml solar_irradiance mixs_core_section 55 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soluble_inorg_mat mixs_core_section 364 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soluble_org_mat mixs_core_section 365 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml soluble_react_phosp mixs_core_section 231 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml source_mat_id sample_id_section 2 DhMultiviewCommonColumnsMixin -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml space_typ_state mixs_core_section 179 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml specific mixs_core_section 180 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml specific_ecosystem sample_id_section 13 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml specific_humidity mixs_core_section 181 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sr_dep_env mixs_core_section 366 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sr_geol_age mixs_core_section 367 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sr_kerog_type mixs_core_section 368 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sr_lithology mixs_core_section 369 HcrCoresInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml standing_water_regm mixs_core_section 286 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml start_date_inc mixs_inspired_section 4 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml start_time_inc mixs_inspired_section 5 SoilMixsInspiredMixin|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml store_cond mixs_modified_section 2 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml substructure_type mixs_core_section 182 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sulfate mixs_core_section 44 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sulfate_fw mixs_core_section 370 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml sulfide mixs_core_section 371 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_air_cont mixs_core_section 183 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_humidity mixs_core_section 184 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_material mixs_core_section 185 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_moisture mixs_core_section 186 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_moisture_ph mixs_core_section 187 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml surf_temp mixs_core_section 188 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml suspend_part_matter mixs_core_section 232 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml suspend_solids mixs_core_section 372 HcrCoresInterface|HcrFluidsSwabsInterface|WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tan mixs_core_section 373 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml technical_reps emsl_section 5 EmslInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml temp mixs_section 37 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml temp_out mixs_core_section 189 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tertiary_treatment mixs_core_section 374 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tidal_stage mixs_core_section 45 SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tillage mixs_section 38 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tiss_cult_growth_med mixs_core_section 287 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml toluene mixs_core_section 375 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_carb mixs_section 47 BiofilmInterface|SedimentInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_depth_water_col mixs_core_section 46 SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_diss_nitro mixs_core_section 233 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_inorg_nitro mixs_core_section 234 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_iron mixs_core_section 376 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro mixs_core_section 377 HcrCoresInterface|HcrFluidsSwabsInterface|WastewaterSludgeInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro_cont_meth mixs_section 49 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro_content mixs_section 48 BiofilmInterface|SedimentInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_org_c_meth mixs_section 51 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_org_carb mixs_section 50 BiofilmInterface|SedimentInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_part_carb mixs_core_section 235 WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_phosp mixs_section 52 HcrCoresInterface|HcrFluidsSwabsInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_phosphate mixs_core_section 378 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tot_sulfur mixs_core_section 379 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml train_line mixs_core_section 190 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml train_stat_loc mixs_core_section 191 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml train_stop_loc mixs_core_section 192 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml turbidity mixs_core_section 47 BiofilmInterface|SedimentInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tvdss_of_hcr_press mixs_core_section 380 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml tvdss_of_hcr_temp mixs_core_section 381 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml typ_occup_density mixs_core_section 193 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ventilation_rate mixs_core_section 56 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml ventilation_type mixs_core_section 57 AirInterface|BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml vfa mixs_core_section 382 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml vfa_fw mixs_core_section 383 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml vis_media mixs_core_section 194 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml viscosity mixs_core_section 384 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml volatile_org_comp mixs_core_section 58 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_area mixs_core_section 195 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_const_type mixs_core_section 196 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_finish_mat mixs_core_section 197 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_height mixs_core_section 198 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_loc mixs_core_section 199 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_surf_treatment mixs_core_section 200 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_texture mixs_core_section 201 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_thermal_mass mixs_core_section 202 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wall_water_mold mixs_core_section 203 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wastewater_type mixs_core_section 385 WastewaterSludgeInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_cont_soil_meth mixs_section 40 SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_content mixs_section 39 BiofilmInterface|SedimentInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_current mixs_core_section 236 MiscEnvsInterface|WaterInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_cut mixs_core_section 386 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_feat_size mixs_core_section 204 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_feat_type mixs_core_section 205 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_prod_rate mixs_core_section 387 HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml water_temp_regm mixs_core_section 288 PlantAssociatedInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml watering_regm mixs_modified_section 25 PlantAssociatedInterface|SoilInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml weekday mixs_core_section 206 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml win mixs_core_section 388 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wind_direction mixs_core_section 59 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml wind_speed mixs_core_section 60 AirInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_cond mixs_core_section 207 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_cover mixs_core_section 208 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_horiz_pos mixs_core_section 209 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_loc mixs_core_section 210 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_mat mixs_core_section 211 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_open_freq mixs_core_section 212 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_size mixs_core_section 213 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_status mixs_core_section 214 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_type mixs_core_section 215 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_vert_pos mixs_core_section 216 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml window_water_mold mixs_core_section 217 BuiltEnvInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml xylene mixs_core_section 389 HcrCoresInterface|HcrFluidsSwabsInterface -Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.0/nmdc_schema/nmdc_materialized_patterns.yaml zinc mixs_inspired_section 1004 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml abs_air_humidity mixs_core_section 61 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml add_recov_method mixs_core_section 289 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml additional_info mixs_core_section 290 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml address mixs_core_section 62 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml adj_room mixs_core_section 63 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml aero_struc mixs_core_section 64 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml agrochem_addition mixs_section 2 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml air_PM_concen mixs_core_section 48 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml air_temp mixs_core_section 65 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml air_temp_regm mixs_modified_section 16 PlantAssociatedInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml al_sat mixs_section 3 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml al_sat_meth mixs_section 4 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml alkalinity mixs_core_section 1 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml alkalinity_method mixs_core_section 218 HcrCoresInterface|HcrFluidsSwabsInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml alkyl_diethers mixs_core_section 2 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml alt mixs_modified_section 26 AirInterface|BiofilmInterface|BuiltEnvInterface|HostAssociatedInterface|MiscEnvsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml aminopept_act mixs_core_section 3 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ammonium mixs_core_section 4 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ammonium_nitrogen mixs_inspired_section 1005 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml amount_light mixs_core_section 66 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml analysis_type sample_id_section 3 DhMultiviewCommonColumnsMixin +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ances_data mixs_core_section 237 HostAssociatedInterface|PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml annual_precpt mixs_section 5 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml annual_temp mixs_section 6 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml antibiotic_regm mixs_core_section 238 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml api mixs_core_section 291 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml arch_struc mixs_core_section 67 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml aromatics_pc mixs_core_section 292 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml asphaltenes_pc mixs_core_section 293 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml atmospheric_data mixs_core_section 219 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml avg_dew_point mixs_core_section 68 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml avg_occup mixs_core_section 69 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml avg_temp mixs_core_section 70 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bac_prod mixs_core_section 220 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bac_resp mixs_core_section 221 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bacteria_carb_prod mixs_core_section 5 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml barometric_press mixs_core_section 49 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml basin mixs_core_section 294 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bathroom_count mixs_core_section 71 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bedroom_count mixs_core_section 72 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml benzene mixs_core_section 295 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biochem_oxygen_dem mixs_core_section 296 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biocide mixs_core_section 297 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biocide_admin_method mixs_core_section 298 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biol_stat mixs_core_section 239 HostAssociatedInterface|PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biomass mixs_core_section 6 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biotic_regm mixs_modified_section 13 PlantAssociatedInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml biotic_relationship mixs_modified_section 22 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bishomohopanol mixs_core_section 7 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml blood_press_diast mixs_core_section 299 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml blood_press_syst mixs_core_section 300 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml bromide mixs_core_section 8 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml build_docs mixs_core_section 73 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml build_occup_type mixs_core_section 74 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml building_setting mixs_core_section 75 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_age mixs_core_section 76 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_set mixs_core_section 77 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml built_struc_type mixs_core_section 78 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml calcium mixs_core_section 9 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml carb_dioxide mixs_core_section 50 AirInterface|BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml carb_monoxide mixs_core_section 51 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml carb_nitro_ratio mixs_section 44 BiofilmInterface|SedimentInterface|SoilInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_area mixs_core_section 79 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_cond mixs_core_section 80 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_finish_mat mixs_core_section 81 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_struc mixs_core_section 82 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_texture mixs_core_section 83 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_thermal_mass mixs_core_section 84 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_type mixs_core_section 85 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ceil_water_mold mixs_core_section 86 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chem_administration mixs_modified_section 17 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chem_mutagen mixs_core_section 240 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chem_oxygen_dem mixs_core_section 301 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chem_treat_method mixs_core_section 302 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chem_treatment mixs_core_section 303 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chloride mixs_core_section 10 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml chlorophyll mixs_core_section 11 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml climate_environment mixs_modified_section 19 PlantAssociatedInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml collection_date mixs_modified_section 3 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml collection_date_inc mixs_inspired_section 2 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml collection_time mixs_inspired_section 1 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml collection_time_inc mixs_inspired_section 3 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml conduc mixs_core_section 222 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml cool_syst_id mixs_core_section 87 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml crop_rotation mixs_section 7 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml cult_root_med mixs_core_section 241 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml cur_land_use mixs_section 8 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml cur_vegetation mixs_section 9 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml cur_vegetation_meth mixs_section 10 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml date_last_rain mixs_core_section 88 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml density mixs_core_section 12 HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml depos_env mixs_core_section 304 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml depth mixs_modified_section 9 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dew_point mixs_core_section 89 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diether_lipids mixs_core_section 13 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_carb_dioxide mixs_core_section 14 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_hydrogen mixs_core_section 15 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_carb mixs_core_section 16 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_nitro mixs_core_section 223 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_inorg_phosp mixs_core_section 224 HcrCoresInterface|HcrFluidsSwabsInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_iron mixs_core_section 305 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_org_carb mixs_core_section 17 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_org_nitro mixs_core_section 18 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_oxygen mixs_core_section 19 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml diss_oxygen_fluid mixs_core_section 306 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_absorb1 jgi_metagenomics_section 7 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_absorb2 jgi_metagenomics_section 8 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_concentration jgi_metagenomics_section 5 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_cont_type jgi_metagenomics_section 10 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_cont_well jgi_metagenomics_section 11 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_container_id jgi_metagenomics_section 9 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_dnase jgi_metagenomics_section 13 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_isolate_meth jgi_metagenomics_section 16 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_project_contact jgi_metagenomics_section 18 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_samp_id jgi_metagenomics_section 3 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_sample_format jgi_metagenomics_section 12 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_sample_name jgi_metagenomics_section 4 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project jgi_metagenomics_section 1 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project_name jgi_metagenomics_section 2 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_seq_project_pi jgi_metagenomics_section 17 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dna_volume jgi_metagenomics_section 6 JgiMgInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml dnase_rna jgi_metatranscriptomics_section 13 JgiMtInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_comp_type mixs_core_section 90 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_cond mixs_core_section 91 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_direct mixs_core_section 92 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_loc mixs_core_section 93 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_mat mixs_core_section 94 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_move mixs_core_section 95 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_size mixs_core_section 96 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_type mixs_core_section 97 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_type_metal mixs_core_section 98 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_type_wood mixs_core_section 99 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml door_water_mold mixs_core_section 100 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml down_par mixs_core_section 225 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml drainage_class mixs_section 11 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml drawings mixs_core_section 101 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem sample_id_section 9 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_category sample_id_section 10 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_subtype sample_id_section 12 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ecosystem_type sample_id_section 11 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml efficiency_percent mixs_core_section 307 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml elev mixs_modified_section 6 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml elevator mixs_core_section 102 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml emsl_store_temp emsl_section 4 EmslInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml emulsions mixs_core_section 308 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml env_broad_scale sample_id_section 6 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml env_local_scale sample_id_section 7 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml env_medium sample_id_section 8 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml env_package sample_id_section 4 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml escalator mixs_core_section 103 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ethylbenzene mixs_core_section 309 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml exp_duct mixs_core_section 104 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml exp_pipe mixs_core_section 105 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml experimental_factor mixs_section 12 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml experimental_factor_other mixs_inspired_section 7 SoilMixsInspiredMixin|SoilInterface +Biosample 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herbicide_regm mixs_core_section 248 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml horizon_meth mixs_section 19 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_age mixs_core_section 249 HostAssociatedInterface|PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_body_habitat mixs_core_section 319 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_body_product mixs_core_section 320 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_body_site mixs_core_section 321 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_body_temp mixs_core_section 322 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_color mixs_core_section 323 HostAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_common_name mixs_core_section 250 HostAssociatedInterface|PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml host_diet mixs_core_section 324 HostAssociatedInterface +Biosample 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https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml mineral_nutr_regm mixs_core_section 263 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml misc_param mixs_section 23 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml n_alkanes mixs_core_section 25 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml nitrate mixs_core_section 26 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml nitrate_nitrogen mixs_inspired_section 1006 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml nitrite mixs_core_section 27 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml nitrite_nitrogen mixs_inspired_section 1007 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml nitro mixs_core_section 28 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample 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mixs_core_section 338 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml organism_count mixs_core_section 30 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml other_treatment mixs_inspired_section 15 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml owc_tvdss mixs_core_section 339 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml oxy_stat_samp mixs_section 25 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ph mixs_modified_section 27 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ph_meth mixs_section 41 SoilInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ph_regm mixs_core_section 266 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml phaeopigments mixs_core_section 35 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml phosphate mixs_section 53 BiofilmInterface|MiscEnvsInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml phosplipid_fatt_acid mixs_core_section 36 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml photon_flux mixs_core_section 229 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml plant_growth_med mixs_core_section 267 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml plant_product mixs_core_section 268 PlantAssociatedInterface +Biosample 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https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml salinity_meth mixs_section 55 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml salt_regm mixs_core_section 281 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_capt_status mixs_core_section 282 HostAssociatedInterface|PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_collec_device mixs_modified_section 14 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample 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https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_loc_corr_rate mixs_core_section 350 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_mat_process mixs_modified_section 12 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_md mixs_core_section 351 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_name sample_id_section 1 DhMultiviewCommonColumnsMixin +Biosample 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https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_dur mixs_core_section 353 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_loc mixs_core_section 41 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_store_temp mixs_modified_section 7 AirInterface|BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_subtype mixs_core_section 354 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_time_out mixs_core_section 170 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_transport_cond mixs_core_section 355 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_tvdss mixs_core_section 356 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_type mixs_core_section 357 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_weather mixs_core_section 171 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml samp_well_name mixs_core_section 358 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sample_link sample_id_section 5 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sample_shipped emsl_section 3 EmslInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sample_type emsl_section 2 EmslInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml saturates_pc mixs_core_section 359 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml season mixs_core_section 172 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml season_environment mixs_core_section 284 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml season_precpt mixs_section 29 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml season_temp mixs_section 30 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml season_use mixs_core_section 173 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml secondary_treatment mixs_core_section 360 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sediment_type mixs_core_section 42 SedimentInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sewage_type mixs_core_section 361 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml shad_dev_water_mold mixs_core_section 174 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_cond mixs_core_section 175 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_loc mixs_core_section 176 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_mat mixs_core_section 177 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml shading_device_type mixs_core_section 178 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sieving mixs_modified_section 8 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml silicate mixs_core_section 43 BiofilmInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml size_frac mixs_core_section 285 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml size_frac_low mixs_modified_section 10 SoilInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml size_frac_up mixs_modified_section 11 SoilInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml slope_aspect mixs_section 1 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml slope_gradient mixs_section 31 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sludge_retent_time mixs_core_section 362 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sodium mixs_core_section 363 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soil_horizon mixs_section 32 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soil_text_measure mixs_section 33 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soil_texture_meth mixs_section 34 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soil_type mixs_section 35 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soil_type_meth mixs_section 36 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml solar_irradiance mixs_core_section 55 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soluble_inorg_mat mixs_core_section 364 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soluble_org_mat mixs_core_section 365 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml soluble_react_phosp mixs_core_section 231 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml source_mat_id sample_id_section 2 DhMultiviewCommonColumnsMixin +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml space_typ_state mixs_core_section 179 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml specific mixs_core_section 180 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml specific_ecosystem sample_id_section 13 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml specific_humidity mixs_core_section 181 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sr_dep_env mixs_core_section 366 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sr_geol_age mixs_core_section 367 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sr_kerog_type mixs_core_section 368 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sr_lithology mixs_core_section 369 HcrCoresInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml standing_water_regm mixs_core_section 286 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml start_date_inc mixs_inspired_section 4 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml start_time_inc mixs_inspired_section 5 SoilMixsInspiredMixin|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml store_cond mixs_modified_section 2 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml substructure_type mixs_core_section 182 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sulfate mixs_core_section 44 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sulfate_fw mixs_core_section 370 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml sulfide mixs_core_section 371 BiofilmInterface|HcrCoresInterface|HcrFluidsSwabsInterface|MiscEnvsInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_air_cont mixs_core_section 183 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_humidity mixs_core_section 184 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_material mixs_core_section 185 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_moisture mixs_core_section 186 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_moisture_ph mixs_core_section 187 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml surf_temp mixs_core_section 188 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml suspend_part_matter mixs_core_section 232 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml suspend_solids mixs_core_section 372 HcrCoresInterface|HcrFluidsSwabsInterface|WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tan mixs_core_section 373 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml technical_reps emsl_section 5 EmslInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml temp mixs_section 37 AirInterface|BiofilmInterface|BuiltEnvInterface|HcrCoresInterface|HcrFluidsSwabsInterface|HostAssociatedInterface|MiscEnvsInterface|PlantAssociatedInterface|SedimentInterface|SoilInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml temp_out mixs_core_section 189 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tertiary_treatment mixs_core_section 374 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tidal_stage mixs_core_section 45 SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tillage mixs_section 38 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tiss_cult_growth_med mixs_core_section 287 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml toluene mixs_core_section 375 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_carb mixs_section 47 BiofilmInterface|SedimentInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_depth_water_col mixs_core_section 46 SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_diss_nitro mixs_core_section 233 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_inorg_nitro mixs_core_section 234 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_iron mixs_core_section 376 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro mixs_core_section 377 HcrCoresInterface|HcrFluidsSwabsInterface|WastewaterSludgeInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro_cont_meth mixs_section 49 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_nitro_content mixs_section 48 BiofilmInterface|SedimentInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_org_c_meth mixs_section 51 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_org_carb mixs_section 50 BiofilmInterface|SedimentInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_part_carb mixs_core_section 235 WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_phosp mixs_section 52 HcrCoresInterface|HcrFluidsSwabsInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_phosphate mixs_core_section 378 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tot_sulfur mixs_core_section 379 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml train_line mixs_core_section 190 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml train_stat_loc mixs_core_section 191 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml train_stop_loc mixs_core_section 192 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml turbidity mixs_core_section 47 BiofilmInterface|SedimentInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tvdss_of_hcr_press mixs_core_section 380 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml tvdss_of_hcr_temp mixs_core_section 381 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml typ_occup_density mixs_core_section 193 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ventilation_rate mixs_core_section 56 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml ventilation_type mixs_core_section 57 AirInterface|BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml vfa mixs_core_section 382 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml vfa_fw mixs_core_section 383 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml vis_media mixs_core_section 194 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml viscosity mixs_core_section 384 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml volatile_org_comp mixs_core_section 58 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_area mixs_core_section 195 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_const_type mixs_core_section 196 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_finish_mat mixs_core_section 197 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_height mixs_core_section 198 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_loc mixs_core_section 199 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_surf_treatment mixs_core_section 200 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_texture mixs_core_section 201 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_thermal_mass mixs_core_section 202 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wall_water_mold mixs_core_section 203 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wastewater_type mixs_core_section 385 WastewaterSludgeInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_cont_soil_meth mixs_section 40 SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_content mixs_section 39 BiofilmInterface|SedimentInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_current mixs_core_section 236 MiscEnvsInterface|WaterInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_cut mixs_core_section 386 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_feat_size mixs_core_section 204 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_feat_type mixs_core_section 205 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_prod_rate mixs_core_section 387 HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml water_temp_regm mixs_core_section 288 PlantAssociatedInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml watering_regm mixs_modified_section 25 PlantAssociatedInterface|SoilInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml weekday mixs_core_section 206 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml win mixs_core_section 388 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wind_direction mixs_core_section 59 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml wind_speed mixs_core_section 60 AirInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_cond mixs_core_section 207 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_cover mixs_core_section 208 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_horiz_pos mixs_core_section 209 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_loc mixs_core_section 210 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_mat mixs_core_section 211 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_open_freq mixs_core_section 212 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_size mixs_core_section 213 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_status mixs_core_section 214 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_type mixs_core_section 215 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_vert_pos mixs_core_section 216 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml window_water_mold mixs_core_section 217 BuiltEnvInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml xylene mixs_core_section 389 HcrCoresInterface|HcrFluidsSwabsInterface +Biosample https://raw.githubusercontent.com/microbiomedata/nmdc-schema/v7.6.5/nmdc_schema/nmdc_materialized_patterns.yaml zinc mixs_inspired_section 1004 SoilInterface diff --git a/src/nmdc_submission_schema/datamodel/nmdc_submission_schema.py b/src/nmdc_submission_schema/datamodel/nmdc_submission_schema.py index 967c5548..777c2686 100644 --- a/src/nmdc_submission_schema/datamodel/nmdc_submission_schema.py +++ b/src/nmdc_submission_schema/datamodel/nmdc_submission_schema.py @@ -1,5 +1,5 @@ # Auto generated from nmdc_submission_schema.yaml by pythongen.py version: 0.9.0 -# Generation date: 2023-06-12T11:35:34 +# Generation date: 2023-06-12T16:46:13 # Schema: nmdc_submission_schema # # id: https://example.com/nmdc_submission_schema @@ -7,7 +7,6 @@ # license: import dataclasses -import sys import re from jsonasobj2 import JsonObj, as_dict from typing import Optional, List, Union, Dict, ClassVar, Any @@ -33,12 +32,12 @@ # Namespaces CHEBI = CurieNamespace('CHEBI', 'http://purl.obolibrary.org/obo/CHEBI_') CHMO = CurieNamespace('CHMO', 'http://purl.obolibrary.org/obo/CHMO_') -COG = CurieNamespace('COG', 'https://unknown.to.linter.org/') -EC = CurieNamespace('EC', 'https://unknown.to.linter.org/') -EFO = CurieNamespace('EFO', 'http://identifiers.org/efo/') +COG = CurieNamespace('COG', 'https://bioregistry.io/cog:') +EC = CurieNamespace('EC', 'https://bioregistry.io/eccode:') +EFO = CurieNamespace('EFO', 'http://www.ebi.ac.uk/efo/') GO = CurieNamespace('GO', 'http://purl.obolibrary.org/obo/GO_') GOLD = CurieNamespace('GOLD', 'http://identifiers.org/gold/') -ISA = CurieNamespace('ISA', 'https://unknown.to.linter.org/') +ISA = CurieNamespace('ISA', 'http://example.com/isa/') KEGG_COMPOUND = CurieNamespace('KEGG_COMPOUND', 'http://identifiers.org/kegg.compound/') KEGG_ORTHOLOGY = CurieNamespace('KEGG_ORTHOLOGY', 'http://identifiers.org/kegg.orthology/') KEGG_REACTION = CurieNamespace('KEGG_REACTION', 'http://identifiers.org/kegg.reaction/') @@ -46,24 +45,28 @@ MIXS = CurieNamespace('MIXS', 'https://w3id.org/mixs/') MIXS_YAML = CurieNamespace('MIXS_yaml', 'https://raw.githubusercontent.com/microbiomedata/mixs/main/model/schema/') METACYC = CurieNamespace('MetaCyc', 'https://identifiers.org/metacyc.reaction/') -METANETX = CurieNamespace('MetaNetX', 'https://unknown.to.linter.org/') -NCBITAXON = CurieNamespace('NCBITaxon', 'http://purl.obolibrary.org/obo/NCBITaxon_') -NCIT = CurieNamespace('NCIT', 'http://purl.obolibrary.org/obo/NCIT_') +METANETX = CurieNamespace('MetaNetX', 'http://example.com/metanetx/') OBI = CurieNamespace('OBI', 'http://purl.obolibrary.org/obo/OBI_') RHEA = CurieNamespace('RHEA', 'http://identifiers.org/rhea/') -RETRORULES = CurieNamespace('RetroRules', 'https://unknown.to.linter.org/') +RETRORULES = CurieNamespace('RetroRules', 'http://example.com/retrorules/') SEED = CurieNamespace('SEED', 'http://identifiers.org/seed/') UO = CurieNamespace('UO', 'http://purl.obolibrary.org/obo/UO_') UNIPROTKB = CurieNamespace('UniProtKB', 'https://identifiers.org/uniprot/') -BARE = CurieNamespace('bare', 'https://unknown.to.linter.org/') BIOLINK = CurieNamespace('biolink', 'https://w3id.org/biolink/vocab/') DCTERMS = CurieNamespace('dcterms', 'http://purl.org/dc/terms/') -GTPO = CurieNamespace('gtpo', 'https://unknown.to.linter.org/') -JGI = CurieNamespace('jgi', 'https://unknown.to.linter.org/') +EMSL_PROJECT = CurieNamespace('emsl_project', 'https://bioregistry.io/emsl.project:') +GENERIC = CurieNamespace('generic', 'https://example.com/generic/') +GNPS_TASK = CurieNamespace('gnps_task', 'https://bioregistry.io/gnps.task:') +GTPO = CurieNamespace('gtpo', 'http://example.com/gtpo/') +IGSN = CurieNamespace('igsn', 'https://app.geosamples.org/sample/igsn/') +JGI = CurieNamespace('jgi', 'http://example.com/jgi/') +JGI_PROPOSAL = CurieNamespace('jgi_proposal', 'https://bioregistry.io/jgi.proposal:') LINKML = CurieNamespace('linkml', 'https://w3id.org/linkml/') +MGNIFY_PROJ = CurieNamespace('mgnify_proj', 'https://identifiers.org/mgnify.proj:') +NEON_IDENTIFIER = CurieNamespace('neon_identifier', 'http://example.org/neon/identifier/') +NEON_SCHEMA = CurieNamespace('neon_schema', 'http://example.org/neon/schema/') NMDC = CurieNamespace('nmdc', 'https://w3id.org/nmdc/') NMDC_SUB_SCHEMA = CurieNamespace('nmdc_sub_schema', 'https://example.com/nmdc_sub_schema/') -NMDC_YAML = CurieNamespace('nmdc_yaml', 'https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/') PROV = CurieNamespace('prov', 'http://www.w3.org/ns/prov#') QUD = CurieNamespace('qud', 'http://qudt.org/1.1/schema/qudt#') RDF = CurieNamespace('rdf', 'http://www.w3.org/1999/02/22-rdf-syntax-ns#') @@ -5106,6 +5109,12 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): if self.proposal_dna is not None and not isinstance(self.proposal_dna, str): self.proposal_dna = str(self.proposal_dna) + if self.dna_absorb1 is not None and not isinstance(self.dna_absorb1, float): + self.dna_absorb1 = float(self.dna_absorb1) + + if self.dna_absorb2 is not None and not isinstance(self.dna_absorb2, float): + self.dna_absorb2 = float(self.dna_absorb2) + if self.oxy_stat_samp is not None and not isinstance(self.oxy_stat_samp, OxyStatSampEnum): self.oxy_stat_samp = OxyStatSampEnum(self.oxy_stat_samp) @@ -5289,6 +5298,12 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): if self.rna_volume is not None and not isinstance(self.rna_volume, float): self.rna_volume = float(self.rna_volume) + if self.rna_absorb1 is not None and not isinstance(self.rna_absorb1, float): + self.rna_absorb1 = float(self.rna_absorb1) + + if self.rna_absorb2 is not None and not isinstance(self.rna_absorb2, float): + self.rna_absorb2 = float(self.rna_absorb2) + if self.oxy_stat_samp is not None and not isinstance(self.oxy_stat_samp, OxyStatSampEnum): self.oxy_stat_samp = OxyStatSampEnum(self.oxy_stat_samp) @@ -9269,7 +9284,7 @@ class NamedThing(YAMLRoot): id: Union[str, NamedThingId] = None name: Optional[str] = None description: Optional[str] = None - alternative_identifiers: Optional[str] = None + alternative_identifiers: Optional[Union[Union[str, URIorCURIE], List[Union[str, URIorCURIE]]]] = empty_list() def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): if self._is_empty(self.id): @@ -9283,8 +9298,9 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): if self.description is not None and not isinstance(self.description, str): self.description = str(self.description) - if self.alternative_identifiers is not None and not isinstance(self.alternative_identifiers, str): - self.alternative_identifiers = str(self.alternative_identifiers) + if not isinstance(self.alternative_identifiers, list): + self.alternative_identifiers = [self.alternative_identifiers] if self.alternative_identifiers is not None else [] + self.alternative_identifiers = [v if isinstance(v, URIorCURIE) else URIorCURIE(v) for v in self.alternative_identifiers] super().__post_init__(**kwargs) @@ -9294,14 +9310,18 @@ class AnalysisTypeEnum(EnumDefinitionImpl): """ placeholder enum descr """ - metabolomics = PermissibleValue(text="metabolomics", - description="placeholder PV descr") - metagenomics = PermissibleValue(text="metagenomics", - description="placeholder PV descr") - metaproteomics = PermissibleValue(text="metaproteomics", - description="placeholder PV descr") - metatranscriptomics = PermissibleValue(text="metatranscriptomics", - description="placeholder PV descr") + metabolomics = PermissibleValue( + text="metabolomics", + description="placeholder PV descr") + metagenomics = PermissibleValue( + text="metagenomics", + description="placeholder PV descr") + metaproteomics = PermissibleValue( + text="metaproteomics", + description="placeholder PV descr") + metatranscriptomics = PermissibleValue( + text="metatranscriptomics", + description="placeholder PV descr") _defn = EnumDefinition( name="AnalysisTypeEnum", @@ -9311,21 +9331,26 @@ class AnalysisTypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "natural organic matter", - PermissibleValue(text="natural organic matter", - description="placeholder PV descr") ) + PermissibleValue( + text="natural organic matter", + description="placeholder PV descr")) class BioticRelationshipEnum(EnumDefinitionImpl): """ placeholder enum descr """ - commensalism = PermissibleValue(text="commensalism", - description="placeholder PV descr") - mutualism = PermissibleValue(text="mutualism", - description="placeholder PV descr") - parasitism = PermissibleValue(text="parasitism", - description="placeholder PV descr") - symbiotic = PermissibleValue(text="symbiotic", - description="placeholder enum descr") + commensalism = PermissibleValue( + text="commensalism", + description="placeholder PV descr") + mutualism = PermissibleValue( + text="mutualism", + description="placeholder PV descr") + parasitism = PermissibleValue( + text="parasitism", + description="placeholder PV descr") + symbiotic = PermissibleValue( + text="symbiotic", + description="placeholder enum descr") _defn = EnumDefinition( name="BioticRelationshipEnum", @@ -9335,8 +9360,9 @@ class BioticRelationshipEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "free living", - PermissibleValue(text="free living", - description="placeholder PV descr") ) + PermissibleValue( + text="free living", + description="placeholder PV descr")) class JgiContTypeEnum(EnumDefinitionImpl): @@ -9351,20 +9377,27 @@ class DnaSampleFormatEnum(EnumDefinitionImpl): """ placeholder enum descr """ - DNAStable = PermissibleValue(text="DNAStable", - description="placeholder PV descr") - Ethanol = PermissibleValue(text="Ethanol", - description="placeholder PV descr") - PBS = PermissibleValue(text="PBS", - description="placeholder PV descr") - Pellet = PermissibleValue(text="Pellet", - description="placeholder PV descr") - RNAStable = PermissibleValue(text="RNAStable", - description="placeholder PV descr") - TE = PermissibleValue(text="TE", - description="placeholder PV descr") - Water = PermissibleValue(text="Water", - description="placeholder PV descr") + DNAStable = PermissibleValue( + text="DNAStable", + description="placeholder PV descr") + Ethanol = PermissibleValue( + text="Ethanol", + description="placeholder PV descr") + PBS = PermissibleValue( + text="PBS", + description="placeholder PV descr") + Pellet = PermissibleValue( + text="Pellet", + description="placeholder PV descr") + RNAStable = PermissibleValue( + text="RNAStable", + description="placeholder PV descr") + TE = PermissibleValue( + text="TE", + description="placeholder PV descr") + Water = PermissibleValue( + text="Water", + description="placeholder PV descr") _defn = EnumDefinition( name="DnaSampleFormatEnum", @@ -9374,21 +9407,25 @@ class DnaSampleFormatEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "10 mM Tris-HCl", - PermissibleValue(text="10 mM Tris-HCl", - description="placeholder PV descr") ) + PermissibleValue( + text="10 mM Tris-HCl", + description="placeholder PV descr")) setattr(cls, "Low EDTA TE", - PermissibleValue(text="Low EDTA TE", - description="placeholder PV descr") ) + PermissibleValue( + text="Low EDTA TE", + description="placeholder PV descr")) setattr(cls, "MDA reaction buffer", - PermissibleValue(text="MDA reaction buffer", - description="placeholder PV descr") ) + PermissibleValue( + text="MDA reaction buffer", + description="placeholder PV descr")) class EcosystemCategoryEnum(EnumDefinitionImpl): """ placeholder enum descr """ - Terrestrial = PermissibleValue(text="Terrestrial", - description="placeholder PV descr") + Terrestrial = PermissibleValue( + text="Terrestrial", + description="placeholder PV descr") _defn = EnumDefinition( name="EcosystemCategoryEnum", @@ -9399,8 +9436,9 @@ class EcosystemEnum(EnumDefinitionImpl): """ placeholder enum descr """ - Environmental = PermissibleValue(text="Environmental", - description="placeholder PV descr") + Environmental = PermissibleValue( + text="Environmental", + description="placeholder PV descr") _defn = EnumDefinition( name="EcosystemEnum", @@ -9411,36 +9449,51 @@ class EcosystemSubtypeEnum(EnumDefinitionImpl): """ placeholder enum descr """ - Biocrust = PermissibleValue(text="Biocrust", - description="placeholder PV descr") - Biofilm = PermissibleValue(text="Biofilm", - description="placeholder PV descr") - Clay = PermissibleValue(text="Clay", - description="placeholder PV descr") - Floodplain = PermissibleValue(text="Floodplain", - description="placeholder PV descr") - Fossil = PermissibleValue(text="Fossil", - description="placeholder PV descr") - Glacier = PermissibleValue(text="Glacier", - description="placeholder PV descr") - Loam = PermissibleValue(text="Loam", - description="placeholder PV descr") - Pasture = PermissibleValue(text="Pasture", - description="placeholder PV descr") - Peat = PermissibleValue(text="Peat", - description="placeholder PV descr") - Ranch = PermissibleValue(text="Ranch", - description="placeholder PV descr") - Sand = PermissibleValue(text="Sand", - description="placeholder PV descr") - Silt = PermissibleValue(text="Silt", - description="placeholder PV descr") - Unclassified = PermissibleValue(text="Unclassified", - description="placeholder PV descr") - Watershed = PermissibleValue(text="Watershed", - description="placeholder PV descr") - Wetlands = PermissibleValue(text="Wetlands", - description="placeholder PV descr") + Biocrust = PermissibleValue( + text="Biocrust", + description="placeholder PV descr") + Biofilm = PermissibleValue( + text="Biofilm", + description="placeholder PV descr") + Clay = PermissibleValue( + text="Clay", + description="placeholder PV descr") + Floodplain = PermissibleValue( + text="Floodplain", + description="placeholder PV descr") + Fossil = PermissibleValue( + text="Fossil", + description="placeholder PV descr") + Glacier = PermissibleValue( + text="Glacier", + description="placeholder PV descr") + Loam = PermissibleValue( + text="Loam", + description="placeholder PV descr") + Pasture = PermissibleValue( + text="Pasture", + description="placeholder PV descr") + Peat = PermissibleValue( + text="Peat", + description="placeholder PV descr") + Ranch = PermissibleValue( + text="Ranch", + description="placeholder PV descr") + Sand = PermissibleValue( + text="Sand", + description="placeholder PV descr") + Silt = PermissibleValue( + text="Silt", + description="placeholder PV descr") + Unclassified = PermissibleValue( + text="Unclassified", + description="placeholder PV descr") + Watershed = PermissibleValue( + text="Watershed", + description="placeholder PV descr") + Wetlands = PermissibleValue( + text="Wetlands", + description="placeholder PV descr") _defn = EnumDefinition( name="EcosystemSubtypeEnum", @@ -9450,30 +9503,37 @@ class EcosystemSubtypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "Bulk soil", - PermissibleValue(text="Bulk soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Bulk soil", + description="placeholder PV descr")) setattr(cls, "Mineral horizon", - PermissibleValue(text="Mineral horizon", - description="placeholder PV descr") ) + PermissibleValue( + text="Mineral horizon", + description="placeholder PV descr")) setattr(cls, "Nature reserve", - PermissibleValue(text="Nature reserve", - description="placeholder PV descr") ) + PermissibleValue( + text="Nature reserve", + description="placeholder PV descr")) setattr(cls, "Organic layer", - PermissibleValue(text="Organic layer", - description="placeholder PV descr") ) + PermissibleValue( + text="Organic layer", + description="placeholder PV descr")) setattr(cls, "Paddy field/soil", - PermissibleValue(text="Paddy field/soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Paddy field/soil", + description="placeholder PV descr")) setattr(cls, "Soil crust", - PermissibleValue(text="Soil crust", - description="placeholder PV descr") ) + PermissibleValue( + text="Soil crust", + description="placeholder PV descr")) class EcosystemTypeEnum(EnumDefinitionImpl): """ placeholder enum descr """ - Soil = PermissibleValue(text="Soil", - description="placeholder PV descr") + Soil = PermissibleValue( + text="Soil", + description="placeholder PV descr") _defn = EnumDefinition( name="EcosystemTypeEnum", @@ -9484,8 +9544,9 @@ class EnvPackageEnum(EnumDefinitionImpl): """ placeholder enum descr """ - soil = PermissibleValue(text="soil", - description="placeholder PV descr") + soil = PermissibleValue( + text="soil", + description="placeholder PV descr") _defn = EnumDefinition( name="EnvPackageEnum", @@ -9496,24 +9557,33 @@ class GrowthFacilEnum(EnumDefinitionImpl): """ placeholder enum descr """ - experimental_garden = PermissibleValue(text="experimental_garden", - description="placeholder PV descr") - field = PermissibleValue(text="field", - description="placeholder PV descr") - field_incubation = PermissibleValue(text="field_incubation", - description="placeholder PV descr") - glasshouse = PermissibleValue(text="glasshouse", - description="placeholder PV descr") - greenhouse = PermissibleValue(text="greenhouse", - description="placeholder PV descr") - growth_chamber = PermissibleValue(text="growth_chamber", - description="placeholder PV descr") - lab_incubation = PermissibleValue(text="lab_incubation", - description="placeholder PV descr") - open_top_chamber = PermissibleValue(text="open_top_chamber", - description="placeholder PV descr") - other = PermissibleValue(text="other", - description="placeholder PV descr") + experimental_garden = PermissibleValue( + text="experimental_garden", + description="placeholder PV descr") + field = PermissibleValue( + text="field", + description="placeholder PV descr") + field_incubation = PermissibleValue( + text="field_incubation", + description="placeholder PV descr") + glasshouse = PermissibleValue( + text="glasshouse", + description="placeholder PV descr") + greenhouse = PermissibleValue( + text="greenhouse", + description="placeholder PV descr") + growth_chamber = PermissibleValue( + text="growth_chamber", + description="placeholder PV descr") + lab_incubation = PermissibleValue( + text="lab_incubation", + description="placeholder PV descr") + open_top_chamber = PermissibleValue( + text="open_top_chamber", + description="placeholder PV descr") + other = PermissibleValue( + text="other", + description="placeholder PV descr") _defn = EnumDefinition( name="GrowthFacilEnum", @@ -9524,16 +9594,21 @@ class RelToOxygenEnum(EnumDefinitionImpl): """ placeholder enum descr """ - aerobe = PermissibleValue(text="aerobe", - description="placeholder PV descr") - anaerobe = PermissibleValue(text="anaerobe", - description="placeholder PV descr") - facultative = PermissibleValue(text="facultative", - description="placeholder PV descr") - microaerophilic = PermissibleValue(text="microaerophilic", - description="placeholder PV descr") - microanaerobe = PermissibleValue(text="microanaerobe", - description="placeholder PV descr") + aerobe = PermissibleValue( + text="aerobe", + description="placeholder PV descr") + anaerobe = PermissibleValue( + text="anaerobe", + description="placeholder PV descr") + facultative = PermissibleValue( + text="facultative", + description="placeholder PV descr") + microaerophilic = PermissibleValue( + text="microaerophilic", + description="placeholder PV descr") + microanaerobe = PermissibleValue( + text="microanaerobe", + description="placeholder PV descr") _defn = EnumDefinition( name="RelToOxygenEnum", @@ -9543,30 +9618,39 @@ class RelToOxygenEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "obligate aerobe", - PermissibleValue(text="obligate aerobe", - description="placeholder PV descr") ) + PermissibleValue( + text="obligate aerobe", + description="placeholder PV descr")) setattr(cls, "obligate anaerobe", - PermissibleValue(text="obligate anaerobe", - description="placeholder PV descr") ) + PermissibleValue( + text="obligate anaerobe", + description="placeholder PV descr")) class RnaSampleFormatEnum(EnumDefinitionImpl): """ placeholder enum descr """ - DNAStable = PermissibleValue(text="DNAStable", - description="placeholder PV descr") - Ethanol = PermissibleValue(text="Ethanol", - description="placeholder PV descr") - PBS = PermissibleValue(text="PBS", - description="placeholder PV descr") - Pellet = PermissibleValue(text="Pellet", - description="placeholder PV descr") - RNAStable = PermissibleValue(text="RNAStable", - description="placeholder PV descr") - TE = PermissibleValue(text="TE", - description="placeholder PV descr") - Water = PermissibleValue(text="Water", - description="placeholder PV descr") + DNAStable = PermissibleValue( + text="DNAStable", + description="placeholder PV descr") + Ethanol = PermissibleValue( + text="Ethanol", + description="placeholder PV descr") + PBS = PermissibleValue( + text="PBS", + description="placeholder PV descr") + Pellet = PermissibleValue( + text="Pellet", + description="placeholder PV descr") + RNAStable = PermissibleValue( + text="RNAStable", + description="placeholder PV descr") + TE = PermissibleValue( + text="TE", + description="placeholder PV descr") + Water = PermissibleValue( + text="Water", + description="placeholder PV descr") _defn = EnumDefinition( name="RnaSampleFormatEnum", @@ -9576,23 +9660,28 @@ class RnaSampleFormatEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "10 mM Tris-HCl", - PermissibleValue(text="10 mM Tris-HCl", - description="placeholder PV descr") ) + PermissibleValue( + text="10 mM Tris-HCl", + description="placeholder PV descr")) setattr(cls, "Low EDTA TE", - PermissibleValue(text="Low EDTA TE", - description="placeholder PV descr") ) + PermissibleValue( + text="Low EDTA TE", + description="placeholder PV descr")) setattr(cls, "MDA reaction buffer", - PermissibleValue(text="MDA reaction buffer", - description="placeholder PV descr") ) + PermissibleValue( + text="MDA reaction buffer", + description="placeholder PV descr")) class SampleTypeEnum(EnumDefinitionImpl): """ placeholder enum descr """ - soil = PermissibleValue(text="soil", - description="placeholder PV descr") - water_extract_soil = PermissibleValue(text="water_extract_soil", - description="placeholder PV descr") + soil = PermissibleValue( + text="soil", + description="placeholder PV descr") + water_extract_soil = PermissibleValue( + text="water_extract_soil", + description="placeholder PV descr") _defn = EnumDefinition( name="SampleTypeEnum", @@ -9603,32 +9692,45 @@ class SpecificEcosystemEnum(EnumDefinitionImpl): """ placeholder enum descr """ - Agricultural = PermissibleValue(text="Agricultural", - description="placeholder PV descr") - Alpine = PermissibleValue(text="Alpine", - description="placeholder PV descr") - Bog = PermissibleValue(text="Bog", - description="placeholder PV descr") - Contaminated = PermissibleValue(text="Contaminated", - description="placeholder PV descr") - Desert = PermissibleValue(text="Desert", - description="placeholder PV descr") - Farm = PermissibleValue(text="Farm", - description="placeholder PV descr") - Grasslands = PermissibleValue(text="Grasslands", - description="placeholder PV descr") - Meadow = PermissibleValue(text="Meadow", - description="placeholder PV descr") - Mine = PermissibleValue(text="Mine", - description="placeholder PV descr") - Permafrost = PermissibleValue(text="Permafrost", - description="placeholder PV descr") - River = PermissibleValue(text="River", - description="placeholder PV descr") - Shrubland = PermissibleValue(text="Shrubland", - description="placeholder PV descr") - Unclassified = PermissibleValue(text="Unclassified", - description="placeholder PV descr") + Agricultural = PermissibleValue( + text="Agricultural", + description="placeholder PV descr") + Alpine = PermissibleValue( + text="Alpine", + description="placeholder PV descr") + Bog = PermissibleValue( + text="Bog", + description="placeholder PV descr") + Contaminated = PermissibleValue( + text="Contaminated", + description="placeholder PV descr") + Desert = PermissibleValue( + text="Desert", + description="placeholder PV descr") + Farm = PermissibleValue( + text="Farm", + description="placeholder PV descr") + Grasslands = PermissibleValue( + text="Grasslands", + description="placeholder PV descr") + Meadow = PermissibleValue( + text="Meadow", + description="placeholder PV descr") + Mine = PermissibleValue( + text="Mine", + description="placeholder PV descr") + Permafrost = PermissibleValue( + text="Permafrost", + description="placeholder PV descr") + River = PermissibleValue( + text="River", + description="placeholder PV descr") + Shrubland = PermissibleValue( + text="Shrubland", + description="placeholder PV descr") + Unclassified = PermissibleValue( + text="Unclassified", + description="placeholder PV descr") _defn = EnumDefinition( name="SpecificEcosystemEnum", @@ -9638,51 +9740,66 @@ class SpecificEcosystemEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "Agricultural land", - PermissibleValue(text="Agricultural land", - description="placeholder PV descr") ) + PermissibleValue( + text="Agricultural land", + description="placeholder PV descr")) setattr(cls, "Agricultural soil", - PermissibleValue(text="Agricultural soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Agricultural soil", + description="placeholder PV descr")) setattr(cls, "Boreal forest", - PermissibleValue(text="Boreal forest", - description="placeholder PV descr") ) + PermissibleValue( + text="Boreal forest", + description="placeholder PV descr")) setattr(cls, "Forest soil", - PermissibleValue(text="Forest soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Forest soil", + description="placeholder PV descr")) setattr(cls, "Forest Soil", - PermissibleValue(text="Forest Soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Forest Soil", + description="placeholder PV descr")) setattr(cls, "Mine drainage", - PermissibleValue(text="Mine drainage", - description="placeholder PV descr") ) + PermissibleValue( + text="Mine drainage", + description="placeholder PV descr")) setattr(cls, "Oil-contaminated", - PermissibleValue(text="Oil-contaminated", - description="placeholder PV descr") ) + PermissibleValue( + text="Oil-contaminated", + description="placeholder PV descr")) setattr(cls, "Orchard soil", - PermissibleValue(text="Orchard soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Orchard soil", + description="placeholder PV descr")) setattr(cls, "Riparian soil", - PermissibleValue(text="Riparian soil", - description="placeholder PV descr") ) + PermissibleValue( + text="Riparian soil", + description="placeholder PV descr")) setattr(cls, "Tropical rainforest", - PermissibleValue(text="Tropical rainforest", - description="placeholder PV descr") ) + PermissibleValue( + text="Tropical rainforest", + description="placeholder PV descr")) setattr(cls, "Uranium contaminated", - PermissibleValue(text="Uranium contaminated", - description="placeholder PV descr") ) + PermissibleValue( + text="Uranium contaminated", + description="placeholder PV descr")) class StoreCondEnum(EnumDefinitionImpl): """ placeholder enum descr """ - fresh = PermissibleValue(text="fresh", - description="placeholder PV descr") - frozen = PermissibleValue(text="frozen", - description="placeholder PV descr") - lyophilized = PermissibleValue(text="lyophilized", - description="placeholder PV descr") - other = PermissibleValue(text="other", - description="placeholder PV descr") + fresh = PermissibleValue( + text="fresh", + description="placeholder PV descr") + frozen = PermissibleValue( + text="frozen", + description="placeholder PV descr") + lyophilized = PermissibleValue( + text="lyophilized", + description="placeholder PV descr") + other = PermissibleValue( + text="other", + description="placeholder PV descr") _defn = EnumDefinition( name="StoreCondEnum", @@ -9713,167 +9830,221 @@ class EnvBroadScaleSoilEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "arid biome [ENVO:01001838]", - PermissibleValue(text="arid biome [ENVO:01001838]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="arid biome [ENVO:01001838]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "subalpine biome [ENVO:01001837]", - PermissibleValue(text="subalpine biome [ENVO:01001837]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="subalpine biome [ENVO:01001837]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "montane biome [ENVO:01001836]", - PermissibleValue(text="montane biome [ENVO:01001836]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="montane biome [ENVO:01001836]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__montane savanna biome [ENVO:01000223]", - PermissibleValue(text="__montane savanna biome [ENVO:01000223]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__montane savanna biome [ENVO:01000223]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__montane shrubland biome [ENVO:01000216]", - PermissibleValue(text="__montane shrubland biome [ENVO:01000216]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__montane shrubland biome [ENVO:01000216]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "alpine biome [ENVO:01001835]", - PermissibleValue(text="alpine biome [ENVO:01001835]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="alpine biome [ENVO:01001835]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__alpine tundra biome [ENVO:01001505]", - PermissibleValue(text="__alpine tundra biome [ENVO:01001505]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__alpine tundra biome [ENVO:01001505]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "subpolar biome [ENVO:01001834]", - PermissibleValue(text="subpolar biome [ENVO:01001834]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="subpolar biome [ENVO:01001834]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "subtropical biome [ENVO:01001832]", - PermissibleValue(text="subtropical biome [ENVO:01001832]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="subtropical biome [ENVO:01001832]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__mediterranean biome [ENVO:01001833]", - PermissibleValue(text="__mediterranean biome [ENVO:01001833]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__mediterranean biome [ENVO:01001833]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____mediterranean savanna biome [ENVO:01000229]", - PermissibleValue(text="____mediterranean savanna biome [ENVO:01000229]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____mediterranean savanna biome [ENVO:01000229]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____mediterranean shrubland biome [ENVO:01000217]", - PermissibleValue(text="____mediterranean shrubland biome [ENVO:01000217]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____mediterranean shrubland biome [ENVO:01000217]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____mediterranean woodland biome [ENVO:01000208]", - PermissibleValue(text="____mediterranean woodland biome [ENVO:01000208]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____mediterranean woodland biome [ENVO:01000208]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__subtropical woodland biome [ENVO:01000222]", - PermissibleValue(text="__subtropical woodland biome [ENVO:01000222]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__subtropical woodland biome [ENVO:01000222]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__subtropical shrubland biome [ENVO:01000213]", - PermissibleValue(text="__subtropical shrubland biome [ENVO:01000213]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__subtropical shrubland biome [ENVO:01000213]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__subtropical savanna biome [ENVO:01000187]", - PermissibleValue(text="__subtropical savanna biome [ENVO:01000187]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__subtropical savanna biome [ENVO:01000187]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "temperate biome [ENVO:01001831]", - PermissibleValue(text="temperate biome [ENVO:01001831]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="temperate biome [ENVO:01001831]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__temperate woodland biome [ENVO:01000221]", - PermissibleValue(text="__temperate woodland biome [ENVO:01000221]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__temperate woodland biome [ENVO:01000221]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__temperate shrubland biome [ENVO:01000215]", - PermissibleValue(text="__temperate shrubland biome [ENVO:01000215]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__temperate shrubland biome [ENVO:01000215]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__temperate savanna biome [ENVO:01000189]", - PermissibleValue(text="__temperate savanna biome [ENVO:01000189]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__temperate savanna biome [ENVO:01000189]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "tropical biome [ENVO:01001830]", - PermissibleValue(text="tropical biome [ENVO:01001830]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="tropical biome [ENVO:01001830]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__tropical woodland biome [ENVO:01000220]", - PermissibleValue(text="__tropical woodland biome [ENVO:01000220]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__tropical woodland biome [ENVO:01000220]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__tropical shrubland biome [ENVO:01000214]", - PermissibleValue(text="__tropical shrubland biome [ENVO:01000214]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__tropical shrubland biome [ENVO:01000214]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__tropical savanna biome [ENVO:01000188]", - PermissibleValue(text="__tropical savanna biome [ENVO:01000188]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__tropical savanna biome [ENVO:01000188]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "polar biome [ENVO:01000339]", - PermissibleValue(text="polar biome [ENVO:01000339]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="polar biome [ENVO:01000339]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "terrestrial biome [ENVO:00000446]", - PermissibleValue(text="terrestrial biome [ENVO:00000446]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="terrestrial biome [ENVO:00000446]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__anthropogenic terrestrial biome [ENVO:01000219]", - PermissibleValue(text="__anthropogenic terrestrial biome [ENVO:01000219]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__anthropogenic terrestrial biome [ENVO:01000219]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____dense settlement biome [ENVO:01000248]", - PermissibleValue(text="____dense settlement biome [ENVO:01000248]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____dense settlement biome [ENVO:01000248]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______urban biome [ENVO:01000249]", - PermissibleValue(text="______urban biome [ENVO:01000249]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______urban biome [ENVO:01000249]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____rangeland biome [ENVO:01000247]", - PermissibleValue(text="____rangeland biome [ENVO:01000247]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____rangeland biome [ENVO:01000247]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____village biome [ENVO:01000246]", - PermissibleValue(text="____village biome [ENVO:01000246]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____village biome [ENVO:01000246]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__mangrove biome [ENVO:01000181]", - PermissibleValue(text="__mangrove biome [ENVO:01000181]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__mangrove biome [ENVO:01000181]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__tundra biome [ENVO:01000180]", - PermissibleValue(text="__tundra biome [ENVO:01000180]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__tundra biome [ENVO:01000180]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____alpine tundra biome [ENVO:01001505]", - PermissibleValue(text="____alpine tundra biome [ENVO:01001505]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____alpine tundra biome [ENVO:01001505]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__shrubland biome [ENVO:01000176]", - PermissibleValue(text="__shrubland biome [ENVO:01000176]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__shrubland biome [ENVO:01000176]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____tidal mangrove shrubland [ENVO:01001369]", - PermissibleValue(text="____tidal mangrove shrubland [ENVO:01001369]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____tidal mangrove shrubland [ENVO:01001369]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____xeric shrubland biome [ENVO:01000218]", - PermissibleValue(text="____xeric shrubland biome [ENVO:01000218]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____xeric shrubland biome [ENVO:01000218]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____montane shrubland biome [ENVO:01000216]", - PermissibleValue(text="____montane shrubland biome [ENVO:01000216]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____montane shrubland biome [ENVO:01000216]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____temperate shrubland biome [ENVO:01000215]", - PermissibleValue(text="____temperate shrubland biome [ENVO:01000215]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____temperate shrubland biome [ENVO:01000215]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____tropical shrubland biome [ENVO:01000214]", - PermissibleValue(text="____tropical shrubland biome [ENVO:01000214]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____tropical shrubland biome [ENVO:01000214]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____subtropical shrubland biome [ENVO:01000213]", - PermissibleValue(text="____subtropical shrubland biome [ENVO:01000213]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____subtropical shrubland biome [ENVO:01000213]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______mediterranean shrubland biome [ENVO:01000217]", - PermissibleValue(text="______mediterranean shrubland biome [ENVO:01000217]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______mediterranean shrubland biome [ENVO:01000217]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__woodland biome [ENVO:01000175]", - PermissibleValue(text="__woodland biome [ENVO:01000175]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__woodland biome [ENVO:01000175]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____subtropical woodland biome [ENVO:01000222]", - PermissibleValue(text="____subtropical woodland biome [ENVO:01000222]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____subtropical woodland biome [ENVO:01000222]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______mediterranean woodland biome [ENVO:01000208]", - PermissibleValue(text="______mediterranean woodland biome [ENVO:01000208]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______mediterranean woodland biome [ENVO:01000208]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____temperate woodland biome [ENVO:01000221]", - PermissibleValue(text="____temperate woodland biome [ENVO:01000221]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____temperate woodland biome [ENVO:01000221]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____tropical woodland biome [ENVO:01000220]", - PermissibleValue(text="____tropical woodland biome [ENVO:01000220]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____tropical woodland biome [ENVO:01000220]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____savanna biome [ENVO:01000178]", - PermissibleValue(text="____savanna biome [ENVO:01000178]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____savanna biome [ENVO:01000178]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______montane savanna biome [ENVO:01000223]", - PermissibleValue(text="______montane savanna biome [ENVO:01000223]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______montane savanna biome [ENVO:01000223]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______flooded savanna biome [ENVO:01000190]", - PermissibleValue(text="______flooded savanna biome [ENVO:01000190]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______flooded savanna biome [ENVO:01000190]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______temperate savanna biome [ENVO:01000189]", - PermissibleValue(text="______temperate savanna biome [ENVO:01000189]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______temperate savanna biome [ENVO:01000189]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______tropical savanna biome [ENVO:01000188]", - PermissibleValue(text="______tropical savanna biome [ENVO:01000188]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______tropical savanna biome [ENVO:01000188]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______subtropical savanna biome [ENVO:01000187]", - PermissibleValue(text="______subtropical savanna biome [ENVO:01000187]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______subtropical savanna biome [ENVO:01000187]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________mediterranean savanna biome [ENVO:01000229]", - PermissibleValue(text="________mediterranean savanna biome [ENVO:01000229]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________mediterranean savanna biome [ENVO:01000229]", + description="placeholder PV descr, DO NOT SORT")) class EnvMediumSoilEnum(EnumDefinitionImpl): """ @@ -9887,311 +10058,413 @@ class EnvMediumSoilEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "pathogen-suppressive soil [ENVO:03600036]", - PermissibleValue(text="pathogen-suppressive soil [ENVO:03600036]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="pathogen-suppressive soil [ENVO:03600036]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "mangrove biome soil [ENVO:02000138]", - PermissibleValue(text="mangrove biome soil [ENVO:02000138]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="mangrove biome soil [ENVO:02000138]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "surface soil [ENVO:02000059]", - PermissibleValue(text="surface soil [ENVO:02000059]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="surface soil [ENVO:02000059]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "frost-susceptible soil [ENVO:01001638]", - PermissibleValue(text="frost-susceptible soil [ENVO:01001638]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="frost-susceptible soil [ENVO:01001638]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "bare soil [ENVO:01001616]", - PermissibleValue(text="bare soil [ENVO:01001616]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="bare soil [ENVO:01001616]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "frozen soil [ENVO:01001526]", - PermissibleValue(text="frozen soil [ENVO:01001526]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="frozen soil [ENVO:01001526]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__friable-frozen soil [ENVO:01001528]", - PermissibleValue(text="__friable-frozen soil [ENVO:01001528]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__friable-frozen soil [ENVO:01001528]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__plastic-frozen soil [ENVO:01001527]", - PermissibleValue(text="__plastic-frozen soil [ENVO:01001527]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__plastic-frozen soil [ENVO:01001527]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__hard-frozen soil [ENVO:01001525]", - PermissibleValue(text="__hard-frozen soil [ENVO:01001525]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__hard-frozen soil [ENVO:01001525]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__frozen compost soil [ENVO:00005765]", - PermissibleValue(text="__frozen compost soil [ENVO:00005765]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__frozen compost soil [ENVO:00005765]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__cryosol [ENVO:00002236]", - PermissibleValue(text="__cryosol [ENVO:00002236]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__cryosol [ENVO:00002236]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "ultisol [ENVO:01001397]", - PermissibleValue(text="ultisol [ENVO:01001397]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="ultisol [ENVO:01001397]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__acrisol [ENVO:00002234]", - PermissibleValue(text="__acrisol [ENVO:00002234]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__acrisol [ENVO:00002234]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "acidic soil [ENVO:01001185]", - PermissibleValue(text="acidic soil [ENVO:01001185]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="acidic soil [ENVO:01001185]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "bulk soil [ENVO:00005802]", - PermissibleValue(text="bulk soil [ENVO:00005802]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="bulk soil [ENVO:00005802]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "red soil [ENVO:00005790]", - PermissibleValue(text="red soil [ENVO:00005790]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="red soil [ENVO:00005790]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "upland soil [ENVO:00005786]", - PermissibleValue(text="upland soil [ENVO:00005786]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="upland soil [ENVO:00005786]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__mountain forest soil [ENVO:00005769]", - PermissibleValue(text="__mountain forest soil [ENVO:00005769]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__mountain forest soil [ENVO:00005769]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__dune soil [ENVO:00002260]", - PermissibleValue(text="__dune soil [ENVO:00002260]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__dune soil [ENVO:00002260]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "ornithogenic soil [ENVO:00005782]", - PermissibleValue(text="ornithogenic soil [ENVO:00005782]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="ornithogenic soil [ENVO:00005782]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "heat stressed soil [ENVO:00005781]", - PermissibleValue(text="heat stressed soil [ENVO:00005781]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="heat stressed soil [ENVO:00005781]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "greenhouse soil [ENVO:00005780]", - PermissibleValue(text="greenhouse soil [ENVO:00005780]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="greenhouse soil [ENVO:00005780]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "tropical soil [ENVO:00005778]", - PermissibleValue(text="tropical soil [ENVO:00005778]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="tropical soil [ENVO:00005778]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "pasture soil [ENVO:00005773]", - PermissibleValue(text="pasture soil [ENVO:00005773]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="pasture soil [ENVO:00005773]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "muddy soil [ENVO:00005771]", - PermissibleValue(text="muddy soil [ENVO:00005771]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="muddy soil [ENVO:00005771]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "orchid soil [ENVO:00005768]", - PermissibleValue(text="orchid soil [ENVO:00005768]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="orchid soil [ENVO:00005768]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "manured soil [ENVO:00005767]", - PermissibleValue(text="manured soil [ENVO:00005767]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="manured soil [ENVO:00005767]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "limed soil [ENVO:00005766]", - PermissibleValue(text="limed soil [ENVO:00005766]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="limed soil [ENVO:00005766]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "pond soil [ENVO:00005764]", - PermissibleValue(text="pond soil [ENVO:00005764]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="pond soil [ENVO:00005764]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "meadow soil [ENVO:00005761]", - PermissibleValue(text="meadow soil [ENVO:00005761]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="meadow soil [ENVO:00005761]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "burned soil [ENVO:00005760]", - PermissibleValue(text="burned soil [ENVO:00005760]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="burned soil [ENVO:00005760]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "lawn soil [ENVO:00005756]", - PermissibleValue(text="lawn soil [ENVO:00005756]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="lawn soil [ENVO:00005756]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "field soil [ENVO:00005755]", - PermissibleValue(text="field soil [ENVO:00005755]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="field soil [ENVO:00005755]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__paddy field soil [ENVO:00005740]", - PermissibleValue(text="__paddy field soil [ENVO:00005740]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__paddy field soil [ENVO:00005740]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____peaty paddy field soil [ENVO:00005776]", - PermissibleValue(text="____peaty paddy field soil [ENVO:00005776]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____peaty paddy field soil [ENVO:00005776]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____alluvial paddy field soil [ENVO:00005759]", - PermissibleValue(text="____alluvial paddy field soil [ENVO:00005759]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____alluvial paddy field soil [ENVO:00005759]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "fertilized soil [ENVO:00005754]", - PermissibleValue(text="fertilized soil [ENVO:00005754]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="fertilized soil [ENVO:00005754]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "sawah soil [ENVO:00005752]", - PermissibleValue(text="sawah soil [ENVO:00005752]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="sawah soil [ENVO:00005752]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "jungle soil [ENVO:00005751]", - PermissibleValue(text="jungle soil [ENVO:00005751]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="jungle soil [ENVO:00005751]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "grassland soil [ENVO:00005750]", - PermissibleValue(text="grassland soil [ENVO:00005750]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="grassland soil [ENVO:00005750]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__steppe soil [ENVO:00005777]", - PermissibleValue(text="__steppe soil [ENVO:00005777]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__steppe soil [ENVO:00005777]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__savanna soil [ENVO:00005746]", - PermissibleValue(text="__savanna soil [ENVO:00005746]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__savanna soil [ENVO:00005746]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "farm soil [ENVO:00005749]", - PermissibleValue(text="farm soil [ENVO:00005749]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="farm soil [ENVO:00005749]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__rubber plantation soil [ENVO:00005788]", - PermissibleValue(text="__rubber plantation soil [ENVO:00005788]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__rubber plantation soil [ENVO:00005788]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__orchard soil [ENVO:00005772]", - PermissibleValue(text="__orchard soil [ENVO:00005772]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__orchard soil [ENVO:00005772]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "dry soil [ENVO:00005748]", - PermissibleValue(text="dry soil [ENVO:00005748]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="dry soil [ENVO:00005748]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "compost soil [ENVO:00005747]", - PermissibleValue(text="compost soil [ENVO:00005747]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="compost soil [ENVO:00005747]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "roadside soil [ENVO:00005743]", - PermissibleValue(text="roadside soil [ENVO:00005743]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="roadside soil [ENVO:00005743]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "arable soil [ENVO:00005742]", - PermissibleValue(text="arable soil [ENVO:00005742]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="arable soil [ENVO:00005742]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "alpine soil [ENVO:00005741]", - PermissibleValue(text="alpine soil [ENVO:00005741]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="alpine soil [ENVO:00005741]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "alluvial soil [ENVO:00002871]", - PermissibleValue(text="alluvial soil [ENVO:00002871]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="alluvial soil [ENVO:00002871]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__alluvial paddy field soil [ENVO:00005759]", - PermissibleValue(text="__alluvial paddy field soil [ENVO:00005759]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__alluvial paddy field soil [ENVO:00005759]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__alluvial swamp soil [ENVO:00005758]", - PermissibleValue(text="__alluvial swamp soil [ENVO:00005758]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__alluvial swamp soil [ENVO:00005758]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "technosol [ENVO:00002275]", - PermissibleValue(text="technosol [ENVO:00002275]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="technosol [ENVO:00002275]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "stagnosol [ENVO:00002274]", - PermissibleValue(text="stagnosol [ENVO:00002274]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="stagnosol [ENVO:00002274]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "fluvisol [ENVO:00002273]", - PermissibleValue(text="fluvisol [ENVO:00002273]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="fluvisol [ENVO:00002273]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "garden soil [ENVO:00002263]", - PermissibleValue(text="garden soil [ENVO:00002263]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="garden soil [ENVO:00002263]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__vegetable garden soil [ENVO:00005779]", - PermissibleValue(text="__vegetable garden soil [ENVO:00005779]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__vegetable garden soil [ENVO:00005779]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__allotment garden soil [ENVO:00005744]", - PermissibleValue(text="__allotment garden soil [ENVO:00005744]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__allotment garden soil [ENVO:00005744]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "clay soil [ENVO:00002262]", - PermissibleValue(text="clay soil [ENVO:00002262]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="clay soil [ENVO:00002262]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "forest soil [ENVO:00002261]", - PermissibleValue(text="forest soil [ENVO:00002261]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="forest soil [ENVO:00002261]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__eucalyptus forest soil [ENVO:00005787]", - PermissibleValue(text="__eucalyptus forest soil [ENVO:00005787]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__eucalyptus forest soil [ENVO:00005787]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__spruce forest soil [ENVO:00005784]", - PermissibleValue(text="__spruce forest soil [ENVO:00005784]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__spruce forest soil [ENVO:00005784]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__leafy wood soil [ENVO:00005783]", - PermissibleValue(text="__leafy wood soil [ENVO:00005783]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__leafy wood soil [ENVO:00005783]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__beech forest soil [ENVO:00005770]", - PermissibleValue(text="__beech forest soil [ENVO:00005770]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__beech forest soil [ENVO:00005770]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "agricultural soil [ENVO:00002259]", - PermissibleValue(text="agricultural soil [ENVO:00002259]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="agricultural soil [ENVO:00002259]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__bluegrass field soil [ENVO:00005789]", - PermissibleValue(text="__bluegrass field soil [ENVO:00005789]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__bluegrass field soil [ENVO:00005789]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "loam [ENVO:00002258]", - PermissibleValue(text="loam [ENVO:00002258]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="loam [ENVO:00002258]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__clay loam [ENVO:06105277]", - PermissibleValue(text="__clay loam [ENVO:06105277]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__clay loam [ENVO:06105277]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____silty clay loam [ENVO:06105278]", - PermissibleValue(text="____silty clay loam [ENVO:06105278]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____silty clay loam [ENVO:06105278]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____sandy clay loam [ENVO:06105276]", - PermissibleValue(text="____sandy clay loam [ENVO:06105276]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____sandy clay loam [ENVO:06105276]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__silty loam [ENVO:06105275]", - PermissibleValue(text="__silty loam [ENVO:06105275]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__silty loam [ENVO:06105275]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__sandy loam [ENVO:06105274]", - PermissibleValue(text="__sandy loam [ENVO:06105274]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__sandy loam [ENVO:06105274]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "podzol [ENVO:00002257]", - PermissibleValue(text="podzol [ENVO:00002257]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="podzol [ENVO:00002257]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "regosol [ENVO:00002256]", - PermissibleValue(text="regosol [ENVO:00002256]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="regosol [ENVO:00002256]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "solonetz [ENVO:00002255]", - PermissibleValue(text="solonetz [ENVO:00002255]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="solonetz [ENVO:00002255]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "vertisol [ENVO:00002254]", - PermissibleValue(text="vertisol [ENVO:00002254]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="vertisol [ENVO:00002254]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "umbrisol [ENVO:00002253]", - PermissibleValue(text="umbrisol [ENVO:00002253]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="umbrisol [ENVO:00002253]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "solonchak [ENVO:00002252]", - PermissibleValue(text="solonchak [ENVO:00002252]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="solonchak [ENVO:00002252]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "planosol [ENVO:00002251]", - PermissibleValue(text="planosol [ENVO:00002251]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="planosol [ENVO:00002251]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "plinthosol [ENVO:00002250]", - PermissibleValue(text="plinthosol [ENVO:00002250]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="plinthosol [ENVO:00002250]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "phaeozem [ENVO:00002249]", - PermissibleValue(text="phaeozem [ENVO:00002249]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="phaeozem [ENVO:00002249]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "luvisol [ENVO:00002248]", - PermissibleValue(text="luvisol [ENVO:00002248]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="luvisol [ENVO:00002248]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "nitisol [ENVO:00002247]", - PermissibleValue(text="nitisol [ENVO:00002247]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="nitisol [ENVO:00002247]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "ferralsol [ENVO:00002246]", - PermissibleValue(text="ferralsol [ENVO:00002246]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="ferralsol [ENVO:00002246]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "gypsisol [ENVO:00002245]", - PermissibleValue(text="gypsisol [ENVO:00002245]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="gypsisol [ENVO:00002245]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "gleysol [ENVO:00002244]", - PermissibleValue(text="gleysol [ENVO:00002244]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="gleysol [ENVO:00002244]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "histosol [ENVO:00002243]", - PermissibleValue(text="histosol [ENVO:00002243]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="histosol [ENVO:00002243]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__peat soil [ENVO:00005774]", - PermissibleValue(text="__peat soil [ENVO:00005774]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__peat soil [ENVO:00005774]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "lixisol [ENVO:00002242]", - PermissibleValue(text="lixisol [ENVO:00002242]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="lixisol [ENVO:00002242]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "leptosol [ENVO:00002241]", - PermissibleValue(text="leptosol [ENVO:00002241]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="leptosol [ENVO:00002241]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "kastanozem [ENVO:00002240]", - PermissibleValue(text="kastanozem [ENVO:00002240]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="kastanozem [ENVO:00002240]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "calcisol [ENVO:00002239]", - PermissibleValue(text="calcisol [ENVO:00002239]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="calcisol [ENVO:00002239]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "durisol [ENVO:00002238]", - PermissibleValue(text="durisol [ENVO:00002238]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="durisol [ENVO:00002238]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "chernozem [ENVO:00002237]", - PermissibleValue(text="chernozem [ENVO:00002237]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="chernozem [ENVO:00002237]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "cambisol [ENVO:00002235]", - PermissibleValue(text="cambisol [ENVO:00002235]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="cambisol [ENVO:00002235]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "albeluvisol [ENVO:00002233]", - PermissibleValue(text="albeluvisol [ENVO:00002233]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="albeluvisol [ENVO:00002233]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "andosol [ENVO:00002232]", - PermissibleValue(text="andosol [ENVO:00002232]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="andosol [ENVO:00002232]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__volcanic soil [ENVO:01001841]", - PermissibleValue(text="__volcanic soil [ENVO:01001841]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__volcanic soil [ENVO:01001841]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "alisol [ENVO:00002231]", - PermissibleValue(text="alisol [ENVO:00002231]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="alisol [ENVO:00002231]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "anthrosol [ENVO:00002230]", - PermissibleValue(text="anthrosol [ENVO:00002230]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="anthrosol [ENVO:00002230]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "arenosol [ENVO:00002229]", - PermissibleValue(text="arenosol [ENVO:00002229]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="arenosol [ENVO:00002229]", + description="placeholder PV descr, DO NOT SORT")) class EnvLocalScaleSoilEnum(EnumDefinitionImpl): """ @@ -10205,324 +10478,393 @@ class EnvLocalScaleSoilEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "astronomical body part [ENVO:01000813]", - PermissibleValue(text="astronomical body part [ENVO:01000813]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="astronomical body part [ENVO:01000813]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__coast [ENVO:01000687]", - PermissibleValue(text="__coast [ENVO:01000687]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__coast [ENVO:01000687]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__solid astronomical body part [ENVO:00000191]", - PermissibleValue(text="__solid astronomical body part [ENVO:00000191]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__solid astronomical body part [ENVO:00000191]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______landform [ENVO:01001886]", - PermissibleValue(text="______landform [ENVO:01001886]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______landform [ENVO:01001886]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______channel [ENVO:03000117]", - PermissibleValue(text="______channel [ENVO:03000117]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______channel [ENVO:03000117]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________tunnel [ENVO:00000068]", - PermissibleValue(text="________tunnel [ENVO:00000068]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________tunnel [ENVO:00000068]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______surface landform [ENVO:01001884]", - PermissibleValue(text="______surface landform [ENVO:01001884]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______surface landform [ENVO:01001884]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________desert [ENVO:01001357]", - PermissibleValue(text="________desert [ENVO:01001357]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________desert [ENVO:01001357]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________outcrop [ENVO:01000302]", - PermissibleValue(text="________outcrop [ENVO:01000302]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________outcrop [ENVO:01000302]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________boulder field [ENVO:00000537]", - PermissibleValue(text="________boulder field [ENVO:00000537]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________boulder field [ENVO:00000537]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________landfill [ENVO:00000533]", - PermissibleValue(text="________landfill [ENVO:00000533]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________landfill [ENVO:00000533]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________hummock [ENVO:00000516]", - PermissibleValue(text="________hummock [ENVO:00000516]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________hummock [ENVO:00000516]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________terrace [ENVO:00000508]", - PermissibleValue(text="________terrace [ENVO:00000508]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________terrace [ENVO:00000508]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________peninsula [ENVO:00000305]", - PermissibleValue(text="________peninsula [ENVO:00000305]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________peninsula [ENVO:00000305]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________shore [ENVO:00000304]", - PermissibleValue(text="________shore [ENVO:00000304]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________shore [ENVO:00000304]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________lake shore [ENVO:00000382]", - PermissibleValue(text="__________lake shore [ENVO:00000382]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________lake shore [ENVO:00000382]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________dry lake [ENVO:00000277]", - PermissibleValue(text="________dry lake [ENVO:00000277]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________dry lake [ENVO:00000277]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________karst [ENVO:00000175]", - PermissibleValue(text="________karst [ENVO:00000175]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________karst [ENVO:00000175]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________isthmus [ENVO:00000174]", - PermissibleValue(text="________isthmus [ENVO:00000174]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________isthmus [ENVO:00000174]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________badland [ENVO:00000127]", - PermissibleValue(text="________badland [ENVO:00000127]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________badland [ENVO:00000127]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________volcanic feature [ENVO:00000094]", - PermissibleValue(text="________volcanic feature [ENVO:00000094]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________volcanic feature [ENVO:00000094]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________volcanic cone [ENVO:00000398]", - PermissibleValue(text="__________volcanic cone [ENVO:00000398]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________volcanic cone [ENVO:00000398]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________tuff cone [ENVO:01000664]", - PermissibleValue(text="____________tuff cone [ENVO:01000664]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________tuff cone [ENVO:01000664]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________beach [ENVO:00000091]", - PermissibleValue(text="________beach [ENVO:00000091]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________beach [ENVO:00000091]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________plain [ENVO:00000086]", - PermissibleValue(text="________plain [ENVO:00000086]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________plain [ENVO:00000086]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________cave [ENVO:00000067]", - PermissibleValue(text="________cave [ENVO:00000067]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________cave [ENVO:00000067]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________spring [ENVO:00000027]", - PermissibleValue(text="________spring [ENVO:00000027]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________spring [ENVO:00000027]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______slope [ENVO:00002000]", - PermissibleValue(text="______slope [ENVO:00002000]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______slope [ENVO:00002000]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________talus slope [ENVO:01000334]", - PermissibleValue(text="________talus slope [ENVO:01000334]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________talus slope [ENVO:01000334]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________hillside [ENVO:01000333]", - PermissibleValue(text="________hillside [ENVO:01000333]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________hillside [ENVO:01000333]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________levee [ENVO:00000178]", - PermissibleValue(text="________levee [ENVO:00000178]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________levee [ENVO:00000178]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________bank [ENVO:00000141]", - PermissibleValue(text="________bank [ENVO:00000141]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________bank [ENVO:00000141]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________cliff [ENVO:00000087]", - PermissibleValue(text="________cliff [ENVO:00000087]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________cliff [ENVO:00000087]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______peak [ENVO:00000480]", - PermissibleValue(text="______peak [ENVO:00000480]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______peak [ENVO:00000480]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______depressed landform [ENVO:00000309]", - PermissibleValue(text="______depressed landform [ENVO:00000309]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______depressed landform [ENVO:00000309]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________geographic basin [ENVO:03000015]", - PermissibleValue(text="________geographic basin [ENVO:03000015]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________geographic basin [ENVO:03000015]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________valley [ENVO:00000100]", - PermissibleValue(text="__________valley [ENVO:00000100]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________valley [ENVO:00000100]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________canyon [ENVO:00000169]", - PermissibleValue(text="____________canyon [ENVO:00000169]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________canyon [ENVO:00000169]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________dry valley [ENVO:00000128]", - PermissibleValue(text="____________dry valley [ENVO:00000128]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________dry valley [ENVO:00000128]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________glacial valley [ENVO:00000248]", - PermissibleValue(text="____________glacial valley [ENVO:00000248]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________glacial valley [ENVO:00000248]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________pit [ENVO:01001871]", - PermissibleValue(text="________pit [ENVO:01001871]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________pit [ENVO:01001871]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________trench [ENVO:01000649]", - PermissibleValue(text="________trench [ENVO:01000649]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________trench [ENVO:01000649]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________swale [ENVO:00000543]", - PermissibleValue(text="________swale [ENVO:00000543]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________swale [ENVO:00000543]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________crater [ENVO:00000514]", - PermissibleValue(text="________crater [ENVO:00000514]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________crater [ENVO:00000514]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________impact crater [ENVO:01001071]", - PermissibleValue(text="__________impact crater [ENVO:01001071]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________impact crater [ENVO:01001071]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________volcanic crater [ENVO:00000246]", - PermissibleValue(text="__________volcanic crater [ENVO:00000246]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________volcanic crater [ENVO:00000246]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________caldera [ENVO:00000096]", - PermissibleValue(text="__________caldera [ENVO:00000096]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________caldera [ENVO:00000096]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________channel of a watercourse [ENVO:00000395]", - PermissibleValue(text="________channel of a watercourse [ENVO:00000395]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________channel of a watercourse [ENVO:00000395]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________strait [ENVO:00000394]", - PermissibleValue(text="__________strait [ENVO:00000394]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________strait [ENVO:00000394]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________dry stream [ENVO:00000278]", - PermissibleValue(text="__________dry stream [ENVO:00000278]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________dry stream [ENVO:00000278]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________dry river [ENVO:01000995]", - PermissibleValue(text="____________dry river [ENVO:01000995]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________dry river [ENVO:01000995]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________artificial channel [ENVO:00000121]", - PermissibleValue(text="__________artificial channel [ENVO:00000121]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________artificial channel [ENVO:00000121]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________plumbing drain [ENVO:01000924]", - PermissibleValue(text="____________plumbing drain [ENVO:01000924]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________plumbing drain [ENVO:01000924]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________ditch [ENVO:00000037]", - PermissibleValue(text="____________ditch [ENVO:00000037]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________ditch [ENVO:00000037]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________sinkhole [ENVO:00000195]", - PermissibleValue(text="________sinkhole [ENVO:00000195]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________sinkhole [ENVO:00000195]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______elevated landform [ENVO:00000176]", - PermissibleValue(text="______elevated landform [ENVO:00000176]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______elevated landform [ENVO:00000176]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________flattened elevation [ENVO:01001491]", - PermissibleValue(text="________flattened elevation [ENVO:01001491]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________flattened elevation [ENVO:01001491]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________butte [ENVO:00000287]", - PermissibleValue(text="__________butte [ENVO:00000287]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________butte [ENVO:00000287]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________plateau [ENVO:00000182]", - PermissibleValue(text="__________plateau [ENVO:00000182]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________plateau [ENVO:00000182]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________mesa [ENVO:00000179]", - PermissibleValue(text="__________mesa [ENVO:00000179]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________mesa [ENVO:00000179]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________pinnacle [ENVO:00000481]", - PermissibleValue(text="________pinnacle [ENVO:00000481]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________pinnacle [ENVO:00000481]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________mount [ENVO:00000477]", - PermissibleValue(text="________mount [ENVO:00000477]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________mount [ENVO:00000477]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________hill [ENVO:00000083]", - PermissibleValue(text="__________hill [ENVO:00000083]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________hill [ENVO:00000083]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____________dune [ENVO:00000170]", - PermissibleValue(text="____________dune [ENVO:00000170]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____________dune [ENVO:00000170]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__________mountain [ENVO:00000081]", - PermissibleValue(text="__________mountain [ENVO:00000081]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__________mountain [ENVO:00000081]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________ridge [ENVO:00000283]", - PermissibleValue(text="________ridge [ENVO:00000283]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________ridge [ENVO:00000283]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____part of a landmass [ENVO:01001781]", - PermissibleValue(text="____part of a landmass [ENVO:01001781]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____part of a landmass [ENVO:01001781]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______peninsula [ENVO:00000305]", - PermissibleValue(text="______peninsula [ENVO:00000305]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______peninsula [ENVO:00000305]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____geological fracture [ENVO:01000667]", - PermissibleValue(text="____geological fracture [ENVO:01000667]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____geological fracture [ENVO:01000667]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______vein [ENVO:01000670]", - PermissibleValue(text="______vein [ENVO:01000670]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______vein [ENVO:01000670]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______geological fault [ENVO:01000668]", - PermissibleValue(text="______geological fault [ENVO:01000668]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______geological fault [ENVO:01000668]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________active geological fault [ENVO:01000669]", - PermissibleValue(text="________active geological fault [ENVO:01000669]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________active geological fault [ENVO:01000669]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______volcano [ENVO:00000247]", - PermissibleValue(text="______volcano [ENVO:00000247]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______volcano [ENVO:00000247]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__field [ENVO:01000352]", - PermissibleValue(text="__field [ENVO:01000352]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__field [ENVO:01000352]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____lava field [ENVO:01000437]", - PermissibleValue(text="____lava field [ENVO:01000437]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____lava field [ENVO:01000437]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____gravel field [ENVO:00000548]", - PermissibleValue(text="____gravel field [ENVO:00000548]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____gravel field [ENVO:00000548]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____woodland clearing [ENVO:00000444]", - PermissibleValue(text="____woodland clearing [ENVO:00000444]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____woodland clearing [ENVO:00000444]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____agricultural field [ENVO:00000114]", - PermissibleValue(text="____agricultural field [ENVO:00000114]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____agricultural field [ENVO:00000114]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____snow field [ENVO:00000146]", - PermissibleValue(text="____snow field [ENVO:00000146]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____snow field [ENVO:00000146]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "__geographic feature [ENVO:00000000]", - PermissibleValue(text="__geographic feature [ENVO:00000000]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="__geographic feature [ENVO:00000000]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____hydrographic feature [ENVO:00000012]", - PermissibleValue(text="____hydrographic feature [ENVO:00000012]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____hydrographic feature [ENVO:00000012]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______reef [ENVO:01001899]", - PermissibleValue(text="______reef [ENVO:01001899]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______reef [ENVO:01001899]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______inlet [ENVO:00000475]", - PermissibleValue(text="______inlet [ENVO:00000475]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______inlet [ENVO:00000475]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______bar [ENVO:00000167]", - PermissibleValue(text="______bar [ENVO:00000167]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______bar [ENVO:00000167]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________tombolo [ENVO:00000420]", - PermissibleValue(text="________tombolo [ENVO:00000420]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________tombolo [ENVO:00000420]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "____anthropogenic geographic feature [ENVO:00000002]", - PermissibleValue(text="____anthropogenic geographic feature [ENVO:00000002]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="____anthropogenic geographic feature [ENVO:00000002]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______yard [ENVO:03600053]", - PermissibleValue(text="______yard [ENVO:03600053]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______yard [ENVO:03600053]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "________residential backyard [ENVO:03600033]", - PermissibleValue(text="________residential backyard [ENVO:03600033]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="________residential backyard [ENVO:03600033]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______market [ENVO:01000987]", - PermissibleValue(text="______market [ENVO:01000987]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______market [ENVO:01000987]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______park [ENVO:00000562]", - PermissibleValue(text="______park [ENVO:00000562]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______park [ENVO:00000562]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______well [ENVO:00000026]", - PermissibleValue(text="______well [ENVO:00000026]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______well [ENVO:00000026]", + description="placeholder PV descr, DO NOT SORT")) setattr(cls, "______garden [ENVO:00000011]", - PermissibleValue(text="______garden [ENVO:00000011]", - description="placeholder PV descr, DO NOT SORT") ) + PermissibleValue( + text="______garden [ENVO:00000011]", + description="placeholder PV descr, DO NOT SORT")) class OxyStatSampEnum(EnumDefinitionImpl): """ placeholder enum descr, DO NOT SORT """ - aerobic = PermissibleValue(text="aerobic", - description="placeholder PV descr, DO NOT SORT") - anaerobic = PermissibleValue(text="anaerobic", - description="placeholder PV descr, DO NOT SORT") - other = PermissibleValue(text="other", - description="placeholder PV descr, DO NOT SORT") + aerobic = PermissibleValue( + text="aerobic", + description="placeholder PV descr, DO NOT SORT") + anaerobic = PermissibleValue( + text="anaerobic", + description="placeholder PV descr, DO NOT SORT") + other = PermissibleValue( + text="other", + description="placeholder PV descr, DO NOT SORT") _defn = EnumDefinition( name="OxyStatSampEnum", description="placeholder enum descr, DO NOT SORT", ) -class WindowMatEnum(EnumDefinitionImpl): - - clad = PermissibleValue(text="clad") - fiberglass = PermissibleValue(text="fiberglass") - metal = PermissibleValue(text="metal") - vinyl = PermissibleValue(text="vinyl") - wood = PermissibleValue(text="wood") - - _defn = EnumDefinition( - name="WindowMatEnum", - ) - -class SubstructureTypeEnum(EnumDefinitionImpl): - - crawlspace = PermissibleValue(text="crawlspace") - basement = PermissibleValue(text="basement") - - _defn = EnumDefinition( - name="SubstructureTypeEnum", - ) - - @classmethod - def _addvals(cls): - setattr(cls, "slab on grade", - PermissibleValue(text="slab on grade") ) - class FilterTypeEnum(EnumDefinitionImpl): HEPA = PermissibleValue(text="HEPA") @@ -10535,73 +10877,56 @@ class FilterTypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "particulate air filter", - PermissibleValue(text="particulate air filter") ) + PermissibleValue(text="particulate air filter")) setattr(cls, "chemical air filter", - PermissibleValue(text="chemical air filter") ) + PermissibleValue(text="chemical air filter")) setattr(cls, "low-MERV pleated media", - PermissibleValue(text="low-MERV pleated media") ) + PermissibleValue(text="low-MERV pleated media")) setattr(cls, "gas-phase or ultraviolet air treatments", - PermissibleValue(text="gas-phase or ultraviolet air treatments") ) - -class WeekdayEnum(EnumDefinitionImpl): - - Monday = PermissibleValue(text="Monday") - Tuesday = PermissibleValue(text="Tuesday") - Wednesday = PermissibleValue(text="Wednesday") - Thursday = PermissibleValue(text="Thursday") - Friday = PermissibleValue(text="Friday") - Saturday = PermissibleValue(text="Saturday") - Sunday = PermissibleValue(text="Sunday") - - _defn = EnumDefinition( - name="WeekdayEnum", - ) - -class TrainLineEnum(EnumDefinitionImpl): - - red = PermissibleValue(text="red") - green = PermissibleValue(text="green") - orange = PermissibleValue(text="orange") - - _defn = EnumDefinition( - name="TrainLineEnum", - ) + PermissibleValue(text="gas-phase or ultraviolet air treatments")) -class DoorDirectEnum(EnumDefinitionImpl): +class WindowCondEnum(EnumDefinitionImpl): - inward = PermissibleValue(text="inward") - outward = PermissibleValue(text="outward") - sideways = PermissibleValue(text="sideways") + damaged = PermissibleValue(text="damaged") + new = PermissibleValue(text="new") + rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="DoorDirectEnum", + name="WindowCondEnum", ) -class FurnitureEnum(EnumDefinitionImpl): - - cabinet = PermissibleValue(text="cabinet") - chair = PermissibleValue(text="chair") - desks = PermissibleValue(text="desks") - - _defn = EnumDefinition( - name="FurnitureEnum", - ) + @classmethod + def _addvals(cls): + setattr(cls, "needs repair", + PermissibleValue(text="needs repair")) + setattr(cls, "visible wear", + PermissibleValue(text="visible wear")) -class OccupDocumentEnum(EnumDefinitionImpl): +class WallFinishMatEnum(EnumDefinitionImpl): - estimate = PermissibleValue(text="estimate") - videos = PermissibleValue(text="videos") + plaster = PermissibleValue(text="plaster") + tile = PermissibleValue(text="tile") + terrazzo = PermissibleValue(text="terrazzo") + wood = PermissibleValue(text="wood") + metal = PermissibleValue(text="metal") + masonry = PermissibleValue(text="masonry") _defn = EnumDefinition( - name="OccupDocumentEnum", + name="WallFinishMatEnum", ) @classmethod def _addvals(cls): - setattr(cls, "automated count", - PermissibleValue(text="automated count") ) - setattr(cls, "manual count", - PermissibleValue(text="manual count") ) + setattr(cls, "gypsum plaster", + PermissibleValue(text="gypsum plaster")) + setattr(cls, "veneer plaster", + PermissibleValue(text="veneer plaster")) + setattr(cls, "gypsum board", + PermissibleValue(text="gypsum board")) + setattr(cls, "stone facing", + PermissibleValue(text="stone facing")) + setattr(cls, "acoustical treatment", + PermissibleValue(text="acoustical treatment")) class WindowHorizPosEnum(EnumDefinitionImpl): @@ -10613,70 +10938,71 @@ class WindowHorizPosEnum(EnumDefinitionImpl): name="WindowHorizPosEnum", ) -class WindowCoverEnum(EnumDefinitionImpl): +class ExtWindowOrientEnum(EnumDefinitionImpl): - blinds = PermissibleValue(text="blinds") - curtains = PermissibleValue(text="curtains") - none = PermissibleValue(text="none") + north = PermissibleValue(text="north") + south = PermissibleValue(text="south") + east = PermissibleValue(text="east") + west = PermissibleValue(text="west") + northeast = PermissibleValue(text="northeast") + southeast = PermissibleValue(text="southeast") + southwest = PermissibleValue(text="southwest") + northwest = PermissibleValue(text="northwest") _defn = EnumDefinition( - name="WindowCoverEnum", + name="ExtWindowOrientEnum", ) -class ShadingDeviceCondEnum(EnumDefinitionImpl): +class SampWeatherEnum(EnumDefinitionImpl): - damaged = PermissibleValue(text="damaged") - new = PermissibleValue(text="new") - rupture = PermissibleValue(text="rupture") + cloudy = PermissibleValue(text="cloudy") + foggy = PermissibleValue(text="foggy") + hail = PermissibleValue(text="hail") + rain = PermissibleValue(text="rain") + snow = PermissibleValue(text="snow") + sleet = PermissibleValue(text="sleet") + sunny = PermissibleValue(text="sunny") + windy = PermissibleValue(text="windy") _defn = EnumDefinition( - name="ShadingDeviceCondEnum", + name="SampWeatherEnum", ) @classmethod def _addvals(cls): - setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) - setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) + setattr(cls, "clear sky", + PermissibleValue(text="clear sky")) -class IntWallCondEnum(EnumDefinitionImpl): +class FloorCondEnum(EnumDefinitionImpl): new = PermissibleValue(text="new") damaged = PermissibleValue(text="damaged") rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="IntWallCondEnum", + name="FloorCondEnum", ) @classmethod def _addvals(cls): setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) + PermissibleValue(text="visible wear")) setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) + PermissibleValue(text="needs repair")) -class LightTypeEnum(EnumDefinitionImpl): +class WindowMatEnum(EnumDefinitionImpl): - none = PermissibleValue(text="none") + clad = PermissibleValue(text="clad") + fiberglass = PermissibleValue(text="fiberglass") + metal = PermissibleValue(text="metal") + vinyl = PermissibleValue(text="vinyl") + wood = PermissibleValue(text="wood") _defn = EnumDefinition( - name="LightTypeEnum", + name="WindowMatEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "natural light", - PermissibleValue(text="natural light") ) - setattr(cls, "electric light", - PermissibleValue(text="electric light") ) - setattr(cls, "desk lamp", - PermissibleValue(text="desk lamp") ) - setattr(cls, "flourescent lights", - PermissibleValue(text="flourescent lights") ) - -class ExtWindowOrientEnum(EnumDefinitionImpl): +class ExtWallOrientEnum(EnumDefinitionImpl): north = PermissibleValue(text="north") south = PermissibleValue(text="south") @@ -10688,92 +11014,97 @@ class ExtWindowOrientEnum(EnumDefinitionImpl): northwest = PermissibleValue(text="northwest") _defn = EnumDefinition( - name="ExtWindowOrientEnum", + name="ExtWallOrientEnum", ) -class ArchStrucEnum(EnumDefinitionImpl): +class FloorWaterMoldEnum(EnumDefinitionImpl): - building = PermissibleValue(text="building") - shed = PermissibleValue(text="shed") - home = PermissibleValue(text="home") + condensation = PermissibleValue(text="condensation") _defn = EnumDefinition( - name="ArchStrucEnum", + name="FloorWaterMoldEnum", ) -class FloorStrucEnum(EnumDefinitionImpl): + @classmethod + def _addvals(cls): + setattr(cls, "mold odor", + PermissibleValue(text="mold odor")) + setattr(cls, "wet floor", + PermissibleValue(text="wet floor")) + setattr(cls, "water stains", + PermissibleValue(text="water stains")) + setattr(cls, "wall discoloration", + PermissibleValue(text="wall discoloration")) + setattr(cls, "floor discoloration", + PermissibleValue(text="floor discoloration")) + setattr(cls, "ceiling discoloration", + PermissibleValue(text="ceiling discoloration")) + setattr(cls, "peeling paint or wallpaper", + PermissibleValue(text="peeling paint or wallpaper")) + setattr(cls, "bulging walls", + PermissibleValue(text="bulging walls")) - balcony = PermissibleValue(text="balcony") - concrete = PermissibleValue(text="concrete") +class WeekdayEnum(EnumDefinitionImpl): + + Monday = PermissibleValue(text="Monday") + Tuesday = PermissibleValue(text="Tuesday") + Wednesday = PermissibleValue(text="Wednesday") + Thursday = PermissibleValue(text="Thursday") + Friday = PermissibleValue(text="Friday") + Saturday = PermissibleValue(text="Saturday") + Sunday = PermissibleValue(text="Sunday") _defn = EnumDefinition( - name="FloorStrucEnum", + name="WeekdayEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "floating floor", - PermissibleValue(text="floating floor") ) - setattr(cls, "glass floor", - PermissibleValue(text="glass floor") ) - setattr(cls, "raised floor", - PermissibleValue(text="raised floor") ) - setattr(cls, "sprung floor", - PermissibleValue(text="sprung floor") ) - setattr(cls, "wood-framed", - PermissibleValue(text="wood-framed") ) - -class HandidnessEnum(EnumDefinitionImpl): +class WindowCoverEnum(EnumDefinitionImpl): - ambidexterity = PermissibleValue(text="ambidexterity") + blinds = PermissibleValue(text="blinds") + curtains = PermissibleValue(text="curtains") + none = PermissibleValue(text="none") _defn = EnumDefinition( - name="HandidnessEnum", + name="WindowCoverEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "left handedness", - PermissibleValue(text="left handedness") ) - setattr(cls, "mixed-handedness", - PermissibleValue(text="mixed-handedness") ) - setattr(cls, "right handedness", - PermissibleValue(text="right handedness") ) - -class WallSurfTreatmentEnum(EnumDefinitionImpl): +class LightTypeEnum(EnumDefinitionImpl): - painted = PermissibleValue(text="painted") - paneling = PermissibleValue(text="paneling") - stucco = PermissibleValue(text="stucco") - fabric = PermissibleValue(text="fabric") + none = PermissibleValue(text="none") _defn = EnumDefinition( - name="WallSurfTreatmentEnum", + name="LightTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "wall paper", - PermissibleValue(text="wall paper") ) - setattr(cls, "no treatment", - PermissibleValue(text="no treatment") ) - -class SpecificEnum(EnumDefinitionImpl): + setattr(cls, "natural light", + PermissibleValue(text="natural light")) + setattr(cls, "electric light", + PermissibleValue(text="electric light")) + setattr(cls, "desk lamp", + PermissibleValue(text="desk lamp")) + setattr(cls, "flourescent lights", + PermissibleValue(text="flourescent lights")) - operation = PermissibleValue(text="operation") - construction = PermissibleValue(text="construction") - bid = PermissibleValue(text="bid") - design = PermissibleValue(text="design") - photos = PermissibleValue(text="photos") +class HeatCoolTypeEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="SpecificEnum", + name="HeatCoolTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "as built", - PermissibleValue(text="as built") ) + setattr(cls, "radiant system", + PermissibleValue(text="radiant system")) + setattr(cls, "heat pump", + PermissibleValue(text="heat pump")) + setattr(cls, "forced air system", + PermissibleValue(text="forced air system")) + setattr(cls, "steam forced heat", + PermissibleValue(text="steam forced heat")) + setattr(cls, "wood stove", + PermissibleValue(text="wood stove")) class WindowLocEnum(EnumDefinitionImpl): @@ -10786,135 +11117,175 @@ class WindowLocEnum(EnumDefinitionImpl): name="WindowLocEnum", ) -class BuildingSettingEnum(EnumDefinitionImpl): +class DoorTypeEnum(EnumDefinitionImpl): - urban = PermissibleValue(text="urban") - suburban = PermissibleValue(text="suburban") - exurban = PermissibleValue(text="exurban") - rural = PermissibleValue(text="rural") + composite = PermissibleValue(text="composite") + metal = PermissibleValue(text="metal") + wooden = PermissibleValue(text="wooden") _defn = EnumDefinition( - name="BuildingSettingEnum", + name="DoorTypeEnum", ) -class SampFloorEnum(EnumDefinitionImpl): +class WallLocEnum(EnumDefinitionImpl): - basement = PermissibleValue(text="basement") - lobby = PermissibleValue(text="lobby") + north = PermissibleValue(text="north") + south = PermissibleValue(text="south") + east = PermissibleValue(text="east") + west = PermissibleValue(text="west") _defn = EnumDefinition( - name="SampFloorEnum", + name="WallLocEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "1st floor", - PermissibleValue(text="1st floor") ) - setattr(cls, "2nd floor", - PermissibleValue(text="2nd floor") ) - -class VisMediaEnum(EnumDefinitionImpl): +class ShadingDeviceTypeEnum(EnumDefinitionImpl): - photos = PermissibleValue(text="photos") - videos = PermissibleValue(text="videos") - interiors = PermissibleValue(text="interiors") - equipment = PermissibleValue(text="equipment") + tree = PermissibleValue(text="tree") + trellis = PermissibleValue(text="trellis") _defn = EnumDefinition( - name="VisMediaEnum", + name="ShadingDeviceTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "commonly of the building", - PermissibleValue(text="commonly of the building") ) - setattr(cls, "site context (adjacent buildings, vegetation, terrain, streets)", - PermissibleValue(text="site context (adjacent buildings, vegetation, terrain, streets)") ) - setattr(cls, "3D scans", - PermissibleValue(text="3D scans") ) + setattr(cls, "bahama shutters", + PermissibleValue(text="bahama shutters")) + setattr(cls, "exterior roll blind", + PermissibleValue(text="exterior roll blind")) + setattr(cls, "gambrel awning", + PermissibleValue(text="gambrel awning")) + setattr(cls, "hood awning", + PermissibleValue(text="hood awning")) + setattr(cls, "porchroller awning", + PermissibleValue(text="porchroller awning")) + setattr(cls, "sarasota shutters", + PermissibleValue(text="sarasota shutters")) + setattr(cls, "slatted aluminum", + PermissibleValue(text="slatted aluminum")) + setattr(cls, "solid aluminum awning", + PermissibleValue(text="solid aluminum awning")) + setattr(cls, "sun screen", + PermissibleValue(text="sun screen")) + setattr(cls, "venetian awning", + PermissibleValue(text="venetian awning")) -class IndoorSpaceEnum(EnumDefinitionImpl): +class FloorFinishMatEnum(EnumDefinitionImpl): - bedroom = PermissibleValue(text="bedroom") - office = PermissibleValue(text="office") - bathroom = PermissibleValue(text="bathroom") - foyer = PermissibleValue(text="foyer") - kitchen = PermissibleValue(text="kitchen") - hallway = PermissibleValue(text="hallway") - elevator = PermissibleValue(text="elevator") + tile = PermissibleValue(text="tile") + carpet = PermissibleValue(text="carpet") + rug = PermissibleValue(text="rug") + lineoleum = PermissibleValue(text="lineoleum") + stone = PermissibleValue(text="stone") + bamboo = PermissibleValue(text="bamboo") + cork = PermissibleValue(text="cork") + terrazo = PermissibleValue(text="terrazo") + concrete = PermissibleValue(text="concrete") + none = PermissibleValue(text="none") + sealed = PermissibleValue(text="sealed") + paint = PermissibleValue(text="paint") _defn = EnumDefinition( - name="IndoorSpaceEnum", + name="FloorFinishMatEnum", ) @classmethod def _addvals(cls): - setattr(cls, "locker room", - PermissibleValue(text="locker room") ) + setattr(cls, "wood strip or parquet", + PermissibleValue(text="wood strip or parquet")) + setattr(cls, "laminate wood", + PermissibleValue(text="laminate wood")) + setattr(cls, "vinyl composition tile", + PermissibleValue(text="vinyl composition tile")) + setattr(cls, "sheet vinyl", + PermissibleValue(text="sheet vinyl")) + setattr(cls, "clear finish", + PermissibleValue(text="clear finish")) + setattr(cls, "none or unfinished", + PermissibleValue(text="none or unfinished")) -class CeilTextureEnum(EnumDefinitionImpl): +class SubstructureTypeEnum(EnumDefinitionImpl): - knockdown = PermissibleValue(text="knockdown") - popcorn = PermissibleValue(text="popcorn") - smooth = PermissibleValue(text="smooth") - swirl = PermissibleValue(text="swirl") + crawlspace = PermissibleValue(text="crawlspace") + basement = PermissibleValue(text="basement") _defn = EnumDefinition( - name="CeilTextureEnum", + name="SubstructureTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "crows feet", - PermissibleValue(text="crows feet") ) - setattr(cls, "crows-foot stomp", - PermissibleValue(text="crows-foot stomp") ) - setattr(cls, "double skip", - PermissibleValue(text="double skip") ) - setattr(cls, "hawk and trowel", - PermissibleValue(text="hawk and trowel") ) - setattr(cls, "orange peel", - PermissibleValue(text="orange peel") ) - setattr(cls, "rosebud stomp", - PermissibleValue(text="rosebud stomp") ) - setattr(cls, "Santa-Fe texture", - PermissibleValue(text="Santa-Fe texture") ) - setattr(cls, "skip trowel", - PermissibleValue(text="skip trowel") ) - setattr(cls, "stomp knockdown", - PermissibleValue(text="stomp knockdown") ) - -class DoorMoveEnum(EnumDefinitionImpl): + setattr(cls, "slab on grade", + PermissibleValue(text="slab on grade")) - collapsible = PermissibleValue(text="collapsible") - folding = PermissibleValue(text="folding") - revolving = PermissibleValue(text="revolving") - sliding = PermissibleValue(text="sliding") - swinging = PermissibleValue(text="swinging") +class RelSampLocEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="DoorMoveEnum", + name="RelSampLocEnum", ) @classmethod def _addvals(cls): - setattr(cls, "rolling shutter", - PermissibleValue(text="rolling shutter") ) + setattr(cls, "edge of car", + PermissibleValue(text="edge of car")) + setattr(cls, "center of car", + PermissibleValue(text="center of car")) + setattr(cls, "under a seat", + PermissibleValue(text="under a seat")) -class DoorCompTypeEnum(EnumDefinitionImpl): +class RoomTypeEnum(EnumDefinitionImpl): - revolving = PermissibleValue(text="revolving") - sliding = PermissibleValue(text="sliding") - telescopic = PermissibleValue(text="telescopic") + attic = PermissibleValue(text="attic") + bathroom = PermissibleValue(text="bathroom") + closet = PermissibleValue(text="closet") + elevator = PermissibleValue(text="elevator") + hallway = PermissibleValue(text="hallway") + kitchen = PermissibleValue(text="kitchen") + stairwell = PermissibleValue(text="stairwell") + lobby = PermissibleValue(text="lobby") + vestibule = PermissibleValue(text="vestibule") + laboratory_wet = PermissibleValue(text="laboratory_wet") + laboratory_dry = PermissibleValue(text="laboratory_dry") + gymnasium = PermissibleValue(text="gymnasium") + natatorium = PermissibleValue(text="natatorium") + auditorium = PermissibleValue(text="auditorium") + lockers = PermissibleValue(text="lockers") + cafe = PermissibleValue(text="cafe") + warehouse = PermissibleValue(text="warehouse") _defn = EnumDefinition( - name="DoorCompTypeEnum", + name="RoomTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "metal covered", - PermissibleValue(text="metal covered") ) + setattr(cls, "conference room", + PermissibleValue(text="conference room")) + setattr(cls, "examining room", + PermissibleValue(text="examining room")) + setattr(cls, "mail room", + PermissibleValue(text="mail room")) + setattr(cls, "private office", + PermissibleValue(text="private office")) + setattr(cls, "open office", + PermissibleValue(text="open office")) + setattr(cls, ",restroom", + PermissibleValue(text=",restroom")) + setattr(cls, "mechanical or electrical room", + PermissibleValue(text="mechanical or electrical room")) + setattr(cls, "data center", + PermissibleValue(text="data center")) + +class HeatDelivLocEnum(EnumDefinitionImpl): + + north = PermissibleValue(text="north") + south = PermissibleValue(text="south") + east = PermissibleValue(text="east") + west = PermissibleValue(text="west") + + _defn = EnumDefinition( + name="HeatDelivLocEnum", + ) class WallTextureEnum(EnumDefinitionImpl): @@ -10930,221 +11301,164 @@ class WallTextureEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "crows feet", - PermissibleValue(text="crows feet") ) + PermissibleValue(text="crows feet")) setattr(cls, "crows-foot stomp", - PermissibleValue(text="crows-foot stomp") ) + PermissibleValue(text="crows-foot stomp")) setattr(cls, "", - PermissibleValue(text="") ) + PermissibleValue(text="")) setattr(cls, "double skip", - PermissibleValue(text="double skip") ) + PermissibleValue(text="double skip")) setattr(cls, "hawk and trowel", - PermissibleValue(text="hawk and trowel") ) + PermissibleValue(text="hawk and trowel")) setattr(cls, "orange peel", - PermissibleValue(text="orange peel") ) + PermissibleValue(text="orange peel")) setattr(cls, "rosebud stomp", - PermissibleValue(text="rosebud stomp") ) + PermissibleValue(text="rosebud stomp")) setattr(cls, "Santa-Fe texture", - PermissibleValue(text="Santa-Fe texture") ) + PermissibleValue(text="Santa-Fe texture")) setattr(cls, "skip trowel", - PermissibleValue(text="skip trowel") ) + PermissibleValue(text="skip trowel")) setattr(cls, "stomp knockdown", - PermissibleValue(text="stomp knockdown") ) - -class WallLocEnum(EnumDefinitionImpl): - - north = PermissibleValue(text="north") - south = PermissibleValue(text="south") - east = PermissibleValue(text="east") - west = PermissibleValue(text="west") - - _defn = EnumDefinition( - name="WallLocEnum", - ) + PermissibleValue(text="stomp knockdown")) -class FloorWaterMoldEnum(EnumDefinitionImpl): +class TrainLineEnum(EnumDefinitionImpl): - condensation = PermissibleValue(text="condensation") + red = PermissibleValue(text="red") + green = PermissibleValue(text="green") + orange = PermissibleValue(text="orange") _defn = EnumDefinition( - name="FloorWaterMoldEnum", + name="TrainLineEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "mold odor", - PermissibleValue(text="mold odor") ) - setattr(cls, "wet floor", - PermissibleValue(text="wet floor") ) - setattr(cls, "water stains", - PermissibleValue(text="water stains") ) - setattr(cls, "wall discoloration", - PermissibleValue(text="wall discoloration") ) - setattr(cls, "floor discoloration", - PermissibleValue(text="floor discoloration") ) - setattr(cls, "ceiling discoloration", - PermissibleValue(text="ceiling discoloration") ) - setattr(cls, "peeling paint or wallpaper", - PermissibleValue(text="peeling paint or wallpaper") ) - setattr(cls, "bulging walls", - PermissibleValue(text="bulging walls") ) - -class DoorTypeEnum(EnumDefinitionImpl): +class ArchStrucEnum(EnumDefinitionImpl): - composite = PermissibleValue(text="composite") - metal = PermissibleValue(text="metal") - wooden = PermissibleValue(text="wooden") + building = PermissibleValue(text="building") + shed = PermissibleValue(text="shed") + home = PermissibleValue(text="home") _defn = EnumDefinition( - name="DoorTypeEnum", + name="ArchStrucEnum", ) -class WindowCondEnum(EnumDefinitionImpl): +class DoorCondEnum(EnumDefinitionImpl): damaged = PermissibleValue(text="damaged") new = PermissibleValue(text="new") rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="WindowCondEnum", + name="DoorCondEnum", ) @classmethod def _addvals(cls): setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) + PermissibleValue(text="needs repair")) setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) + PermissibleValue(text="visible wear")) -class WaterFeatTypeEnum(EnumDefinitionImpl): +class BuildingSettingEnum(EnumDefinitionImpl): - fountain = PermissibleValue(text="fountain") - pool = PermissibleValue(text="pool") - stream = PermissibleValue(text="stream") - waterfall = PermissibleValue(text="waterfall") + urban = PermissibleValue(text="urban") + suburban = PermissibleValue(text="suburban") + exurban = PermissibleValue(text="exurban") + rural = PermissibleValue(text="rural") _defn = EnumDefinition( - name="WaterFeatTypeEnum", + name="BuildingSettingEnum", + ) + +class SpecificEnum(EnumDefinitionImpl): + + operation = PermissibleValue(text="operation") + construction = PermissibleValue(text="construction") + bid = PermissibleValue(text="bid") + design = PermissibleValue(text="design") + photos = PermissibleValue(text="photos") + + _defn = EnumDefinition( + name="SpecificEnum", ) @classmethod def _addvals(cls): - setattr(cls, "standing feature", - PermissibleValue(text="standing feature") ) - -class FloorCondEnum(EnumDefinitionImpl): + setattr(cls, "as built", + PermissibleValue(text="as built")) - new = PermissibleValue(text="new") - damaged = PermissibleValue(text="damaged") - rupture = PermissibleValue(text="rupture") +class WallConstTypeEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="FloorCondEnum", + name="WallConstTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) - setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) + setattr(cls, "frame construction", + PermissibleValue(text="frame construction")) + setattr(cls, "joisted masonry", + PermissibleValue(text="joisted masonry")) + setattr(cls, "light noncombustible", + PermissibleValue(text="light noncombustible")) + setattr(cls, "masonry noncombustible", + PermissibleValue(text="masonry noncombustible")) + setattr(cls, "modified fire resistive", + PermissibleValue(text="modified fire resistive")) + setattr(cls, "fire resistive", + PermissibleValue(text="fire resistive")) -class IndoorSurfEnum(EnumDefinitionImpl): +class IndoorSpaceEnum(EnumDefinitionImpl): - cabinet = PermissibleValue(text="cabinet") - ceiling = PermissibleValue(text="ceiling") - door = PermissibleValue(text="door") - shelving = PermissibleValue(text="shelving") - window = PermissibleValue(text="window") - wall = PermissibleValue(text="wall") + bedroom = PermissibleValue(text="bedroom") + office = PermissibleValue(text="office") + bathroom = PermissibleValue(text="bathroom") + foyer = PermissibleValue(text="foyer") + kitchen = PermissibleValue(text="kitchen") + hallway = PermissibleValue(text="hallway") + elevator = PermissibleValue(text="elevator") _defn = EnumDefinition( - name="IndoorSurfEnum", + name="IndoorSpaceEnum", ) @classmethod def _addvals(cls): - setattr(cls, "counter top", - PermissibleValue(text="counter top") ) - setattr(cls, "vent cover", - PermissibleValue(text="vent cover") ) + setattr(cls, "locker room", + PermissibleValue(text="locker room")) -class ExtWallOrientEnum(EnumDefinitionImpl): +class GenderRestroomEnum(EnumDefinitionImpl): - north = PermissibleValue(text="north") - south = PermissibleValue(text="south") - east = PermissibleValue(text="east") - west = PermissibleValue(text="west") - northeast = PermissibleValue(text="northeast") - southeast = PermissibleValue(text="southeast") - southwest = PermissibleValue(text="southwest") - northwest = PermissibleValue(text="northwest") - - _defn = EnumDefinition( - name="ExtWallOrientEnum", - ) - -class BuildOccupTypeEnum(EnumDefinitionImpl): - - office = PermissibleValue(text="office") - market = PermissibleValue(text="market") - restaurant = PermissibleValue(text="restaurant") - residence = PermissibleValue(text="residence") - school = PermissibleValue(text="school") - residential = PermissibleValue(text="residential") - commercial = PermissibleValue(text="commercial") - airport = PermissibleValue(text="airport") + female = PermissibleValue(text="female") + male = PermissibleValue(text="male") + unisex = PermissibleValue(text="unisex") _defn = EnumDefinition( - name="BuildOccupTypeEnum", + name="GenderRestroomEnum", ) @classmethod def _addvals(cls): - setattr(cls, "low rise", - PermissibleValue(text="low rise") ) - setattr(cls, "high rise", - PermissibleValue(text="high rise") ) - setattr(cls, "wood framed", - PermissibleValue(text="wood framed") ) - setattr(cls, "health care", - PermissibleValue(text="health care") ) - setattr(cls, "sports complex", - PermissibleValue(text="sports complex") ) - -class DoorMatEnum(EnumDefinitionImpl): + setattr(cls, "all gender", + PermissibleValue(text="all gender")) + setattr(cls, "gender neurtral", + PermissibleValue(text="gender neurtral")) + setattr(cls, "male and female", + PermissibleValue(text="male and female")) - aluminum = PermissibleValue(text="aluminum") - fiberboard = PermissibleValue(text="fiberboard") - fiberglass = PermissibleValue(text="fiberglass") - metal = PermissibleValue(text="metal") - vinyl = PermissibleValue(text="vinyl") - wood = PermissibleValue(text="wood") +class WindowTypeEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="DoorMatEnum", + name="WindowTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "cellular PVC", - PermissibleValue(text="cellular PVC") ) - setattr(cls, "engineered plastic", - PermissibleValue(text="engineered plastic") ) - setattr(cls, "thermoplastic alloy", - PermissibleValue(text="thermoplastic alloy") ) - setattr(cls, "wood/plastic composite", - PermissibleValue(text="wood/plastic composite") ) - -class DoorLocEnum(EnumDefinitionImpl): - - north = PermissibleValue(text="north") - south = PermissibleValue(text="south") - east = PermissibleValue(text="east") - west = PermissibleValue(text="west") - - _defn = EnumDefinition( - name="DoorLocEnum", - ) + setattr(cls, "single-hung sash window", + PermissibleValue(text="single-hung sash window")) + setattr(cls, "horizontal sash window", + PermissibleValue(text="horizontal sash window")) + setattr(cls, "fixed window", + PermissibleValue(text="fixed window")) class MechStrucEnum(EnumDefinitionImpl): @@ -11162,59 +11476,101 @@ class MechStrucEnum(EnumDefinitionImpl): name="MechStrucEnum", ) -class SurfAirContEnum(EnumDefinitionImpl): +class DoorTypeWoodEnum(EnumDefinitionImpl): - dust = PermissibleValue(text="dust") - radon = PermissibleValue(text="radon") - nutrients = PermissibleValue(text="nutrients") - biocides = PermissibleValue(text="biocides") + battened = PermissibleValue(text="battened") + flush = PermissibleValue(text="flush") + louvered = PermissibleValue(text="louvered") _defn = EnumDefinition( - name="SurfAirContEnum", + name="DoorTypeWoodEnum", ) @classmethod def _addvals(cls): - setattr(cls, "organic matter", - PermissibleValue(text="organic matter") ) - setattr(cls, "particulate matter", - PermissibleValue(text="particulate matter") ) - setattr(cls, "volatile organic compounds", - PermissibleValue(text="volatile organic compounds") ) - setattr(cls, "biological contaminants", - PermissibleValue(text="biological contaminants") ) + setattr(cls, "bettened and ledged", + PermissibleValue(text="bettened and ledged")) + setattr(cls, "ledged and braced", + PermissibleValue(text="ledged and braced")) + setattr(cls, "ledged and framed", + PermissibleValue(text="ledged and framed")) + setattr(cls, "ledged, braced and frame", + PermissibleValue(text="ledged, braced and frame")) + setattr(cls, "framed and paneled", + PermissibleValue(text="framed and paneled")) + setattr(cls, "glashed or sash", + PermissibleValue(text="glashed or sash")) + setattr(cls, "wire gauged", + PermissibleValue(text="wire gauged")) -class ShadingDeviceTypeEnum(EnumDefinitionImpl): +class WaterFeatTypeEnum(EnumDefinitionImpl): - tree = PermissibleValue(text="tree") - trellis = PermissibleValue(text="trellis") + fountain = PermissibleValue(text="fountain") + pool = PermissibleValue(text="pool") + stream = PermissibleValue(text="stream") + waterfall = PermissibleValue(text="waterfall") _defn = EnumDefinition( - name="ShadingDeviceTypeEnum", + name="WaterFeatTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "bahama shutters", - PermissibleValue(text="bahama shutters") ) - setattr(cls, "exterior roll blind", - PermissibleValue(text="exterior roll blind") ) - setattr(cls, "gambrel awning", - PermissibleValue(text="gambrel awning") ) - setattr(cls, "hood awning", - PermissibleValue(text="hood awning") ) - setattr(cls, "porchroller awning", - PermissibleValue(text="porchroller awning") ) - setattr(cls, "sarasota shutters", - PermissibleValue(text="sarasota shutters") ) - setattr(cls, "slatted aluminum", - PermissibleValue(text="slatted aluminum") ) - setattr(cls, "solid aluminum awning", - PermissibleValue(text="solid aluminum awning") ) - setattr(cls, "sun screen", - PermissibleValue(text="sun screen") ) - setattr(cls, "venetian awning", - PermissibleValue(text="venetian awning") ) + setattr(cls, "standing feature", + PermissibleValue(text="standing feature")) + +class DoorTypeMetalEnum(EnumDefinitionImpl): + + collapsible = PermissibleValue(text="collapsible") + hollow = PermissibleValue(text="hollow") + + _defn = EnumDefinition( + name="DoorTypeMetalEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "corrugated steel", + PermissibleValue(text="corrugated steel")) + setattr(cls, "rolling shutters", + PermissibleValue(text="rolling shutters")) + setattr(cls, "steel plate", + PermissibleValue(text="steel plate")) + +class RoomConnectedEnum(EnumDefinitionImpl): + + attic = PermissibleValue(text="attic") + bathroom = PermissibleValue(text="bathroom") + closet = PermissibleValue(text="closet") + elevator = PermissibleValue(text="elevator") + hallway = PermissibleValue(text="hallway") + kitchen = PermissibleValue(text="kitchen") + office = PermissibleValue(text="office") + stairwell = PermissibleValue(text="stairwell") + + _defn = EnumDefinition( + name="RoomConnectedEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "conference room", + PermissibleValue(text="conference room")) + setattr(cls, "examining room", + PermissibleValue(text="examining room")) + setattr(cls, "mail room", + PermissibleValue(text="mail room")) + +class DoorLocEnum(EnumDefinitionImpl): + + north = PermissibleValue(text="north") + south = PermissibleValue(text="south") + east = PermissibleValue(text="east") + west = PermissibleValue(text="west") + + _defn = EnumDefinition( + name="DoorLocEnum", + ) class RoomLocEnum(EnumDefinitionImpl): @@ -11225,357 +11581,333 @@ class RoomLocEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "corner room", - PermissibleValue(text="corner room") ) + PermissibleValue(text="corner room")) setattr(cls, "interior room", - PermissibleValue(text="interior room") ) + PermissibleValue(text="interior room")) setattr(cls, "exterior wall", - PermissibleValue(text="exterior wall") ) + PermissibleValue(text="exterior wall")) -class RoomCondtEnum(EnumDefinitionImpl): +class WindowVertPosEnum(EnumDefinitionImpl): - new = PermissibleValue(text="new") - damaged = PermissibleValue(text="damaged") - rupture = PermissibleValue(text="rupture") + bottom = PermissibleValue(text="bottom") + middle = PermissibleValue(text="middle") + top = PermissibleValue(text="top") + low = PermissibleValue(text="low") + high = PermissibleValue(text="high") _defn = EnumDefinition( - name="RoomCondtEnum", + name="WindowVertPosEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) - setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) - setattr(cls, "visible signs of mold/mildew", - PermissibleValue(text="visible signs of mold/mildew") ) - -class SurfMaterialEnum(EnumDefinitionImpl): +class HandidnessEnum(EnumDefinitionImpl): - adobe = PermissibleValue(text="adobe") - carpet = PermissibleValue(text="carpet") - concrete = PermissibleValue(text="concrete") - glass = PermissibleValue(text="glass") - metal = PermissibleValue(text="metal") - paint = PermissibleValue(text="paint") - plastic = PermissibleValue(text="plastic") - stone = PermissibleValue(text="stone") - stucco = PermissibleValue(text="stucco") - tile = PermissibleValue(text="tile") - vinyl = PermissibleValue(text="vinyl") - wood = PermissibleValue(text="wood") + ambidexterity = PermissibleValue(text="ambidexterity") _defn = EnumDefinition( - name="SurfMaterialEnum", + name="HandidnessEnum", ) @classmethod def _addvals(cls): - setattr(cls, "cinder blocks", - PermissibleValue(text="cinder blocks") ) - setattr(cls, "hay bales", - PermissibleValue(text="hay bales") ) - setattr(cls, "stainless steel", - PermissibleValue(text="stainless steel") ) + setattr(cls, "left handedness", + PermissibleValue(text="left handedness")) + setattr(cls, "mixed-handedness", + PermissibleValue(text="mixed-handedness")) + setattr(cls, "right handedness", + PermissibleValue(text="right handedness")) -class CeilFinishMatEnum(EnumDefinitionImpl): +class DoorMatEnum(EnumDefinitionImpl): - drywall = PermissibleValue(text="drywall") - tiles = PermissibleValue(text="tiles") - PVC = PermissibleValue(text="PVC") - plasterboard = PermissibleValue(text="plasterboard") - metal = PermissibleValue(text="metal") + aluminum = PermissibleValue(text="aluminum") + fiberboard = PermissibleValue(text="fiberboard") fiberglass = PermissibleValue(text="fiberglass") - stucco = PermissibleValue(text="stucco") + metal = PermissibleValue(text="metal") + vinyl = PermissibleValue(text="vinyl") wood = PermissibleValue(text="wood") _defn = EnumDefinition( - name="CeilFinishMatEnum", + name="DoorMatEnum", ) @classmethod def _addvals(cls): - setattr(cls, "mineral fibre", - PermissibleValue(text="mineral fibre") ) - setattr(cls, "mineral wool/calcium silicate", - PermissibleValue(text="mineral wool/calcium silicate") ) - -class DoorTypeWoodEnum(EnumDefinitionImpl): + setattr(cls, "cellular PVC", + PermissibleValue(text="cellular PVC")) + setattr(cls, "engineered plastic", + PermissibleValue(text="engineered plastic")) + setattr(cls, "thermoplastic alloy", + PermissibleValue(text="thermoplastic alloy")) + setattr(cls, "wood/plastic composite", + PermissibleValue(text="wood/plastic composite")) - battened = PermissibleValue(text="battened") - flush = PermissibleValue(text="flush") - louvered = PermissibleValue(text="louvered") +class QuadPosEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="DoorTypeWoodEnum", + name="QuadPosEnum", ) @classmethod def _addvals(cls): - setattr(cls, "bettened and ledged", - PermissibleValue(text="bettened and ledged") ) - setattr(cls, "ledged and braced", - PermissibleValue(text="ledged and braced") ) - setattr(cls, "ledged and framed", - PermissibleValue(text="ledged and framed") ) - setattr(cls, "ledged, braced and frame", - PermissibleValue(text="ledged, braced and frame") ) - setattr(cls, "framed and paneled", - PermissibleValue(text="framed and paneled") ) - setattr(cls, "glashed or sash", - PermissibleValue(text="glashed or sash") ) - setattr(cls, "wire gauged", - PermissibleValue(text="wire gauged") ) + setattr(cls, "North side", + PermissibleValue(text="North side")) + setattr(cls, "West side", + PermissibleValue(text="West side")) + setattr(cls, "South side", + PermissibleValue(text="South side")) + setattr(cls, "East side", + PermissibleValue(text="East side")) -class HeatDelivLocEnum(EnumDefinitionImpl): +class SeasonUseEnum(EnumDefinitionImpl): - north = PermissibleValue(text="north") - south = PermissibleValue(text="south") - east = PermissibleValue(text="east") - west = PermissibleValue(text="west") + Spring = PermissibleValue(text="Spring") + Summer = PermissibleValue(text="Summer") + Fall = PermissibleValue(text="Fall") + Winter = PermissibleValue(text="Winter") _defn = EnumDefinition( - name="HeatDelivLocEnum", + name="SeasonUseEnum", ) -class TrainStatLocEnum(EnumDefinitionImpl): +class SampFloorEnum(EnumDefinitionImpl): - riverside = PermissibleValue(text="riverside") + basement = PermissibleValue(text="basement") + lobby = PermissibleValue(text="lobby") _defn = EnumDefinition( - name="TrainStatLocEnum", + name="SampFloorEnum", ) @classmethod def _addvals(cls): - setattr(cls, "south station above ground", - PermissibleValue(text="south station above ground") ) - setattr(cls, "south station underground", - PermissibleValue(text="south station underground") ) - setattr(cls, "south station amtrak", - PermissibleValue(text="south station amtrak") ) - setattr(cls, "forest hills", - PermissibleValue(text="forest hills") ) + setattr(cls, "1st floor", + PermissibleValue(text="1st floor")) + setattr(cls, "2nd floor", + PermissibleValue(text="2nd floor")) -class FloorFinishMatEnum(EnumDefinitionImpl): +class DoorDirectEnum(EnumDefinitionImpl): - tile = PermissibleValue(text="tile") - carpet = PermissibleValue(text="carpet") - rug = PermissibleValue(text="rug") - lineoleum = PermissibleValue(text="lineoleum") - stone = PermissibleValue(text="stone") - bamboo = PermissibleValue(text="bamboo") - cork = PermissibleValue(text="cork") - terrazo = PermissibleValue(text="terrazo") - concrete = PermissibleValue(text="concrete") - none = PermissibleValue(text="none") - sealed = PermissibleValue(text="sealed") - paint = PermissibleValue(text="paint") + inward = PermissibleValue(text="inward") + outward = PermissibleValue(text="outward") + sideways = PermissibleValue(text="sideways") _defn = EnumDefinition( - name="FloorFinishMatEnum", + name="DoorDirectEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "wood strip or parquet", - PermissibleValue(text="wood strip or parquet") ) - setattr(cls, "laminate wood", - PermissibleValue(text="laminate wood") ) - setattr(cls, "vinyl composition tile", - PermissibleValue(text="vinyl composition tile") ) - setattr(cls, "sheet vinyl", - PermissibleValue(text="sheet vinyl") ) - setattr(cls, "clear finish", - PermissibleValue(text="clear finish") ) - setattr(cls, "none or unfinished", - PermissibleValue(text="none or unfinished") ) +class SurfAirContEnum(EnumDefinitionImpl): -class WindowTypeEnum(EnumDefinitionImpl): + dust = PermissibleValue(text="dust") + radon = PermissibleValue(text="radon") + nutrients = PermissibleValue(text="nutrients") + biocides = PermissibleValue(text="biocides") _defn = EnumDefinition( - name="WindowTypeEnum", + name="SurfAirContEnum", ) @classmethod def _addvals(cls): - setattr(cls, "single-hung sash window", - PermissibleValue(text="single-hung sash window") ) - setattr(cls, "horizontal sash window", - PermissibleValue(text="horizontal sash window") ) - setattr(cls, "fixed window", - PermissibleValue(text="fixed window") ) + setattr(cls, "organic matter", + PermissibleValue(text="organic matter")) + setattr(cls, "particulate matter", + PermissibleValue(text="particulate matter")) + setattr(cls, "volatile organic compounds", + PermissibleValue(text="volatile organic compounds")) + setattr(cls, "biological contaminants", + PermissibleValue(text="biological contaminants")) -class DrawingsEnum(EnumDefinitionImpl): +class OccupDocumentEnum(EnumDefinitionImpl): - operation = PermissibleValue(text="operation") - construction = PermissibleValue(text="construction") - bid = PermissibleValue(text="bid") - design = PermissibleValue(text="design") - diagram = PermissibleValue(text="diagram") - sketch = PermissibleValue(text="sketch") + estimate = PermissibleValue(text="estimate") + videos = PermissibleValue(text="videos") _defn = EnumDefinition( - name="DrawingsEnum", + name="OccupDocumentEnum", ) @classmethod def _addvals(cls): - setattr(cls, "as built", - PermissibleValue(text="as built") ) - setattr(cls, "building navigation map", - PermissibleValue(text="building navigation map") ) + setattr(cls, "automated count", + PermissibleValue(text="automated count")) + setattr(cls, "manual count", + PermissibleValue(text="manual count")) -class WallConstTypeEnum(EnumDefinitionImpl): +class RoomCondtEnum(EnumDefinitionImpl): + + new = PermissibleValue(text="new") + damaged = PermissibleValue(text="damaged") + rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="WallConstTypeEnum", + name="RoomCondtEnum", ) @classmethod def _addvals(cls): - setattr(cls, "frame construction", - PermissibleValue(text="frame construction") ) - setattr(cls, "joisted masonry", - PermissibleValue(text="joisted masonry") ) - setattr(cls, "light noncombustible", - PermissibleValue(text="light noncombustible") ) - setattr(cls, "masonry noncombustible", - PermissibleValue(text="masonry noncombustible") ) - setattr(cls, "modified fire resistive", - PermissibleValue(text="modified fire resistive") ) - setattr(cls, "fire resistive", - PermissibleValue(text="fire resistive") ) + setattr(cls, "visible wear", + PermissibleValue(text="visible wear")) + setattr(cls, "needs repair", + PermissibleValue(text="needs repair")) + setattr(cls, "visible signs of mold/mildew", + PermissibleValue(text="visible signs of mold/mildew")) -class WallFinishMatEnum(EnumDefinitionImpl): +class CeilCondEnum(EnumDefinitionImpl): - plaster = PermissibleValue(text="plaster") - tile = PermissibleValue(text="tile") - terrazzo = PermissibleValue(text="terrazzo") - wood = PermissibleValue(text="wood") - metal = PermissibleValue(text="metal") - masonry = PermissibleValue(text="masonry") + new = PermissibleValue(text="new") + damaged = PermissibleValue(text="damaged") + rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="WallFinishMatEnum", + name="CeilCondEnum", ) @classmethod def _addvals(cls): - setattr(cls, "gypsum plaster", - PermissibleValue(text="gypsum plaster") ) - setattr(cls, "veneer plaster", - PermissibleValue(text="veneer plaster") ) - setattr(cls, "gypsum board", - PermissibleValue(text="gypsum board") ) - setattr(cls, "stone facing", - PermissibleValue(text="stone facing") ) - setattr(cls, "acoustical treatment", - PermissibleValue(text="acoustical treatment") ) + setattr(cls, "visible wear", + PermissibleValue(text="visible wear")) + setattr(cls, "needs repair", + PermissibleValue(text="needs repair")) -class HeatCoolTypeEnum(EnumDefinitionImpl): +class ShadingDeviceCondEnum(EnumDefinitionImpl): + + damaged = PermissibleValue(text="damaged") + new = PermissibleValue(text="new") + rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="HeatCoolTypeEnum", + name="ShadingDeviceCondEnum", ) @classmethod def _addvals(cls): - setattr(cls, "radiant system", - PermissibleValue(text="radiant system") ) - setattr(cls, "heat pump", - PermissibleValue(text="heat pump") ) - setattr(cls, "forced air system", - PermissibleValue(text="forced air system") ) - setattr(cls, "steam forced heat", - PermissibleValue(text="steam forced heat") ) - setattr(cls, "wood stove", - PermissibleValue(text="wood stove") ) + setattr(cls, "needs repair", + PermissibleValue(text="needs repair")) + setattr(cls, "visible wear", + PermissibleValue(text="visible wear")) -class WindowVertPosEnum(EnumDefinitionImpl): +class CeilFinishMatEnum(EnumDefinitionImpl): - bottom = PermissibleValue(text="bottom") - middle = PermissibleValue(text="middle") - top = PermissibleValue(text="top") - low = PermissibleValue(text="low") - high = PermissibleValue(text="high") + drywall = PermissibleValue(text="drywall") + tiles = PermissibleValue(text="tiles") + PVC = PermissibleValue(text="PVC") + plasterboard = PermissibleValue(text="plasterboard") + metal = PermissibleValue(text="metal") + fiberglass = PermissibleValue(text="fiberglass") + stucco = PermissibleValue(text="stucco") + wood = PermissibleValue(text="wood") _defn = EnumDefinition( - name="WindowVertPosEnum", + name="CeilFinishMatEnum", ) -class CeilCondEnum(EnumDefinitionImpl): + @classmethod + def _addvals(cls): + setattr(cls, "mineral fibre", + PermissibleValue(text="mineral fibre")) + setattr(cls, "mineral wool/calcium silicate", + PermissibleValue(text="mineral wool/calcium silicate")) - new = PermissibleValue(text="new") - damaged = PermissibleValue(text="damaged") - rupture = PermissibleValue(text="rupture") +class WallSurfTreatmentEnum(EnumDefinitionImpl): + + painted = PermissibleValue(text="painted") + paneling = PermissibleValue(text="paneling") + stucco = PermissibleValue(text="stucco") + fabric = PermissibleValue(text="fabric") _defn = EnumDefinition( - name="CeilCondEnum", + name="WallSurfTreatmentEnum", ) @classmethod def _addvals(cls): - setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) - setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) + setattr(cls, "wall paper", + PermissibleValue(text="wall paper")) + setattr(cls, "no treatment", + PermissibleValue(text="no treatment")) -class DoorCondEnum(EnumDefinitionImpl): +class FurnitureEnum(EnumDefinitionImpl): - damaged = PermissibleValue(text="damaged") - new = PermissibleValue(text="new") - rupture = PermissibleValue(text="rupture") + cabinet = PermissibleValue(text="cabinet") + chair = PermissibleValue(text="chair") + desks = PermissibleValue(text="desks") _defn = EnumDefinition( - name="DoorCondEnum", + name="FurnitureEnum", + ) + +class CeilTextureEnum(EnumDefinitionImpl): + + knockdown = PermissibleValue(text="knockdown") + popcorn = PermissibleValue(text="popcorn") + smooth = PermissibleValue(text="smooth") + swirl = PermissibleValue(text="swirl") + + _defn = EnumDefinition( + name="CeilTextureEnum", ) @classmethod def _addvals(cls): - setattr(cls, "needs repair", - PermissibleValue(text="needs repair") ) - setattr(cls, "visible wear", - PermissibleValue(text="visible wear") ) + setattr(cls, "crows feet", + PermissibleValue(text="crows feet")) + setattr(cls, "crows-foot stomp", + PermissibleValue(text="crows-foot stomp")) + setattr(cls, "double skip", + PermissibleValue(text="double skip")) + setattr(cls, "hawk and trowel", + PermissibleValue(text="hawk and trowel")) + setattr(cls, "orange peel", + PermissibleValue(text="orange peel")) + setattr(cls, "rosebud stomp", + PermissibleValue(text="rosebud stomp")) + setattr(cls, "Santa-Fe texture", + PermissibleValue(text="Santa-Fe texture")) + setattr(cls, "skip trowel", + PermissibleValue(text="skip trowel")) + setattr(cls, "stomp knockdown", + PermissibleValue(text="stomp knockdown")) -class RelSampLocEnum(EnumDefinitionImpl): +class FloorStrucEnum(EnumDefinitionImpl): + + balcony = PermissibleValue(text="balcony") + concrete = PermissibleValue(text="concrete") _defn = EnumDefinition( - name="RelSampLocEnum", + name="FloorStrucEnum", ) @classmethod def _addvals(cls): - setattr(cls, "edge of car", - PermissibleValue(text="edge of car") ) - setattr(cls, "center of car", - PermissibleValue(text="center of car") ) - setattr(cls, "under a seat", - PermissibleValue(text="under a seat") ) + setattr(cls, "floating floor", + PermissibleValue(text="floating floor")) + setattr(cls, "glass floor", + PermissibleValue(text="glass floor")) + setattr(cls, "raised floor", + PermissibleValue(text="raised floor")) + setattr(cls, "sprung floor", + PermissibleValue(text="sprung floor")) + setattr(cls, "wood-framed", + PermissibleValue(text="wood-framed")) -class RoomConnectedEnum(EnumDefinitionImpl): +class IndoorSurfEnum(EnumDefinitionImpl): - attic = PermissibleValue(text="attic") - bathroom = PermissibleValue(text="bathroom") - closet = PermissibleValue(text="closet") - elevator = PermissibleValue(text="elevator") - hallway = PermissibleValue(text="hallway") - kitchen = PermissibleValue(text="kitchen") - office = PermissibleValue(text="office") - stairwell = PermissibleValue(text="stairwell") + cabinet = PermissibleValue(text="cabinet") + ceiling = PermissibleValue(text="ceiling") + door = PermissibleValue(text="door") + shelving = PermissibleValue(text="shelving") + window = PermissibleValue(text="window") + wall = PermissibleValue(text="wall") _defn = EnumDefinition( - name="RoomConnectedEnum", + name="IndoorSurfEnum", ) @classmethod def _addvals(cls): - setattr(cls, "conference room", - PermissibleValue(text="conference room") ) - setattr(cls, "examining room", - PermissibleValue(text="examining room") ) - setattr(cls, "mail room", - PermissibleValue(text="mail room") ) + setattr(cls, "counter top", + PermissibleValue(text="counter top")) + setattr(cls, "vent cover", + PermissibleValue(text="vent cover")) class TrainStopLocEnum(EnumDefinitionImpl): @@ -11587,210 +11919,287 @@ class TrainStopLocEnum(EnumDefinitionImpl): name="TrainStopLocEnum", ) -class QuadPosEnum(EnumDefinitionImpl): +class VisMediaEnum(EnumDefinitionImpl): + + photos = PermissibleValue(text="photos") + videos = PermissibleValue(text="videos") + interiors = PermissibleValue(text="interiors") + equipment = PermissibleValue(text="equipment") _defn = EnumDefinition( - name="QuadPosEnum", + name="VisMediaEnum", ) @classmethod def _addvals(cls): - setattr(cls, "North side", - PermissibleValue(text="North side") ) - setattr(cls, "West side", - PermissibleValue(text="West side") ) - setattr(cls, "South side", - PermissibleValue(text="South side") ) - setattr(cls, "East side", - PermissibleValue(text="East side") ) + setattr(cls, "commonly of the building", + PermissibleValue(text="commonly of the building")) + setattr(cls, "site context (adjacent buildings, vegetation, terrain, streets)", + PermissibleValue(text="site context (adjacent buildings, vegetation, terrain, streets)")) + setattr(cls, "3D scans", + PermissibleValue(text="3D scans")) -class CeilTypeEnum(EnumDefinitionImpl): +class DoorMoveEnum(EnumDefinitionImpl): - cathedral = PermissibleValue(text="cathedral") - dropped = PermissibleValue(text="dropped") - concave = PermissibleValue(text="concave") - coffered = PermissibleValue(text="coffered") - cove = PermissibleValue(text="cove") - stretched = PermissibleValue(text="stretched") + collapsible = PermissibleValue(text="collapsible") + folding = PermissibleValue(text="folding") + revolving = PermissibleValue(text="revolving") + sliding = PermissibleValue(text="sliding") + swinging = PermissibleValue(text="swinging") _defn = EnumDefinition( - name="CeilTypeEnum", + name="DoorMoveEnum", ) @classmethod def _addvals(cls): - setattr(cls, "barrel-shaped", - PermissibleValue(text="barrel-shaped") ) + setattr(cls, "rolling shutter", + PermissibleValue(text="rolling shutter")) -class BuildDocsEnum(EnumDefinitionImpl): +class RoomSampPosEnum(EnumDefinitionImpl): - schedule = PermissibleValue(text="schedule") - sections = PermissibleValue(text="sections") - submittals = PermissibleValue(text="submittals") - windows = PermissibleValue(text="windows") + center = PermissibleValue(text="center") _defn = EnumDefinition( - name="BuildDocsEnum", + name="RoomSampPosEnum", ) @classmethod def _addvals(cls): - setattr(cls, "building information model", - PermissibleValue(text="building information model") ) - setattr(cls, "commissioning report", - PermissibleValue(text="commissioning report") ) - setattr(cls, "complaint logs", - PermissibleValue(text="complaint logs") ) - setattr(cls, "contract administration", - PermissibleValue(text="contract administration") ) - setattr(cls, "cost estimate", - PermissibleValue(text="cost estimate") ) - setattr(cls, "janitorial schedules or logs", - PermissibleValue(text="janitorial schedules or logs") ) - setattr(cls, "maintenance plans", - PermissibleValue(text="maintenance plans") ) - setattr(cls, "shop drawings", - PermissibleValue(text="shop drawings") ) - setattr(cls, "ventilation system", - PermissibleValue(text="ventilation system") ) + setattr(cls, "north corner", + PermissibleValue(text="north corner")) + setattr(cls, "south corner", + PermissibleValue(text="south corner")) + setattr(cls, "west corner", + PermissibleValue(text="west corner")) + setattr(cls, "east corner", + PermissibleValue(text="east corner")) + setattr(cls, "northeast corner", + PermissibleValue(text="northeast corner")) + setattr(cls, "northwest corner", + PermissibleValue(text="northwest corner")) + setattr(cls, "southeast corner", + PermissibleValue(text="southeast corner")) + setattr(cls, "southwest corner", + PermissibleValue(text="southwest corner")) -class RoomTypeEnum(EnumDefinitionImpl): +class SurfMaterialEnum(EnumDefinitionImpl): - attic = PermissibleValue(text="attic") - bathroom = PermissibleValue(text="bathroom") - closet = PermissibleValue(text="closet") - elevator = PermissibleValue(text="elevator") - hallway = PermissibleValue(text="hallway") - kitchen = PermissibleValue(text="kitchen") - stairwell = PermissibleValue(text="stairwell") - lobby = PermissibleValue(text="lobby") - vestibule = PermissibleValue(text="vestibule") - laboratory_wet = PermissibleValue(text="laboratory_wet") - laboratory_dry = PermissibleValue(text="laboratory_dry") - gymnasium = PermissibleValue(text="gymnasium") - natatorium = PermissibleValue(text="natatorium") - auditorium = PermissibleValue(text="auditorium") - lockers = PermissibleValue(text="lockers") - cafe = PermissibleValue(text="cafe") - warehouse = PermissibleValue(text="warehouse") + adobe = PermissibleValue(text="adobe") + carpet = PermissibleValue(text="carpet") + concrete = PermissibleValue(text="concrete") + glass = PermissibleValue(text="glass") + metal = PermissibleValue(text="metal") + paint = PermissibleValue(text="paint") + plastic = PermissibleValue(text="plastic") + stone = PermissibleValue(text="stone") + stucco = PermissibleValue(text="stucco") + tile = PermissibleValue(text="tile") + vinyl = PermissibleValue(text="vinyl") + wood = PermissibleValue(text="wood") _defn = EnumDefinition( - name="RoomTypeEnum", + name="SurfMaterialEnum", ) @classmethod def _addvals(cls): - setattr(cls, "conference room", - PermissibleValue(text="conference room") ) - setattr(cls, "examining room", - PermissibleValue(text="examining room") ) - setattr(cls, "mail room", - PermissibleValue(text="mail room") ) - setattr(cls, "private office", - PermissibleValue(text="private office") ) - setattr(cls, "open office", - PermissibleValue(text="open office") ) - setattr(cls, ",restroom", - PermissibleValue(text=",restroom") ) - setattr(cls, "mechanical or electrical room", - PermissibleValue(text="mechanical or electrical room") ) - setattr(cls, "data center", - PermissibleValue(text="data center") ) + setattr(cls, "cinder blocks", + PermissibleValue(text="cinder blocks")) + setattr(cls, "hay bales", + PermissibleValue(text="hay bales")) + setattr(cls, "stainless steel", + PermissibleValue(text="stainless steel")) -class SeasonUseEnum(EnumDefinitionImpl): +class BuildOccupTypeEnum(EnumDefinitionImpl): - Spring = PermissibleValue(text="Spring") - Summer = PermissibleValue(text="Summer") - Fall = PermissibleValue(text="Fall") - Winter = PermissibleValue(text="Winter") + office = PermissibleValue(text="office") + market = PermissibleValue(text="market") + restaurant = PermissibleValue(text="restaurant") + residence = PermissibleValue(text="residence") + school = PermissibleValue(text="school") + residential = PermissibleValue(text="residential") + commercial = PermissibleValue(text="commercial") + airport = PermissibleValue(text="airport") _defn = EnumDefinition( - name="SeasonUseEnum", + name="BuildOccupTypeEnum", ) -class DoorTypeMetalEnum(EnumDefinitionImpl): + @classmethod + def _addvals(cls): + setattr(cls, "low rise", + PermissibleValue(text="low rise")) + setattr(cls, "high rise", + PermissibleValue(text="high rise")) + setattr(cls, "wood framed", + PermissibleValue(text="wood framed")) + setattr(cls, "health care", + PermissibleValue(text="health care")) + setattr(cls, "sports complex", + PermissibleValue(text="sports complex")) - collapsible = PermissibleValue(text="collapsible") - hollow = PermissibleValue(text="hollow") +class DoorCompTypeEnum(EnumDefinitionImpl): + + revolving = PermissibleValue(text="revolving") + sliding = PermissibleValue(text="sliding") + telescopic = PermissibleValue(text="telescopic") _defn = EnumDefinition( - name="DoorTypeMetalEnum", + name="DoorCompTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "corrugated steel", - PermissibleValue(text="corrugated steel") ) - setattr(cls, "rolling shutters", - PermissibleValue(text="rolling shutters") ) - setattr(cls, "steel plate", - PermissibleValue(text="steel plate") ) + setattr(cls, "metal covered", + PermissibleValue(text="metal covered")) + +class DrawingsEnum(EnumDefinitionImpl): + + operation = PermissibleValue(text="operation") + construction = PermissibleValue(text="construction") + bid = PermissibleValue(text="bid") + design = PermissibleValue(text="design") + diagram = PermissibleValue(text="diagram") + sketch = PermissibleValue(text="sketch") + + _defn = EnumDefinition( + name="DrawingsEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "as built", + PermissibleValue(text="as built")) + setattr(cls, "building navigation map", + PermissibleValue(text="building navigation map")) + +class TrainStatLocEnum(EnumDefinitionImpl): + + riverside = PermissibleValue(text="riverside") + + _defn = EnumDefinition( + name="TrainStatLocEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "south station above ground", + PermissibleValue(text="south station above ground")) + setattr(cls, "south station underground", + PermissibleValue(text="south station underground")) + setattr(cls, "south station amtrak", + PermissibleValue(text="south station amtrak")) + setattr(cls, "forest hills", + PermissibleValue(text="forest hills")) + +class BuildDocsEnum(EnumDefinitionImpl): + + schedule = PermissibleValue(text="schedule") + sections = PermissibleValue(text="sections") + submittals = PermissibleValue(text="submittals") + windows = PermissibleValue(text="windows") + + _defn = EnumDefinition( + name="BuildDocsEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "building information model", + PermissibleValue(text="building information model")) + setattr(cls, "commissioning report", + PermissibleValue(text="commissioning report")) + setattr(cls, "complaint logs", + PermissibleValue(text="complaint logs")) + setattr(cls, "contract administration", + PermissibleValue(text="contract administration")) + setattr(cls, "cost estimate", + PermissibleValue(text="cost estimate")) + setattr(cls, "janitorial schedules or logs", + PermissibleValue(text="janitorial schedules or logs")) + setattr(cls, "maintenance plans", + PermissibleValue(text="maintenance plans")) + setattr(cls, "shop drawings", + PermissibleValue(text="shop drawings")) + setattr(cls, "ventilation system", + PermissibleValue(text="ventilation system")) -class RoomSampPosEnum(EnumDefinitionImpl): +class CeilTypeEnum(EnumDefinitionImpl): - center = PermissibleValue(text="center") + cathedral = PermissibleValue(text="cathedral") + dropped = PermissibleValue(text="dropped") + concave = PermissibleValue(text="concave") + coffered = PermissibleValue(text="coffered") + cove = PermissibleValue(text="cove") + stretched = PermissibleValue(text="stretched") _defn = EnumDefinition( - name="RoomSampPosEnum", + name="CeilTypeEnum", ) @classmethod def _addvals(cls): - setattr(cls, "north corner", - PermissibleValue(text="north corner") ) - setattr(cls, "south corner", - PermissibleValue(text="south corner") ) - setattr(cls, "west corner", - PermissibleValue(text="west corner") ) - setattr(cls, "east corner", - PermissibleValue(text="east corner") ) - setattr(cls, "northeast corner", - PermissibleValue(text="northeast corner") ) - setattr(cls, "northwest corner", - PermissibleValue(text="northwest corner") ) - setattr(cls, "southeast corner", - PermissibleValue(text="southeast corner") ) - setattr(cls, "southwest corner", - PermissibleValue(text="southwest corner") ) + setattr(cls, "barrel-shaped", + PermissibleValue(text="barrel-shaped")) -class SampWeatherEnum(EnumDefinitionImpl): +class IntWallCondEnum(EnumDefinitionImpl): - cloudy = PermissibleValue(text="cloudy") - foggy = PermissibleValue(text="foggy") - hail = PermissibleValue(text="hail") - rain = PermissibleValue(text="rain") - snow = PermissibleValue(text="snow") - sleet = PermissibleValue(text="sleet") - sunny = PermissibleValue(text="sunny") - windy = PermissibleValue(text="windy") + new = PermissibleValue(text="new") + damaged = PermissibleValue(text="damaged") + rupture = PermissibleValue(text="rupture") _defn = EnumDefinition( - name="SampWeatherEnum", + name="IntWallCondEnum", ) @classmethod def _addvals(cls): - setattr(cls, "clear sky", - PermissibleValue(text="clear sky") ) + setattr(cls, "visible wear", + PermissibleValue(text="visible wear")) + setattr(cls, "needs repair", + PermissibleValue(text="needs repair")) -class GenderRestroomEnum(EnumDefinitionImpl): +class DeposEnvEnum(EnumDefinitionImpl): - female = PermissibleValue(text="female") - male = PermissibleValue(text="male") - unisex = PermissibleValue(text="unisex") + other = PermissibleValue(text="other") _defn = EnumDefinition( - name="GenderRestroomEnum", + name="DeposEnvEnum", ) @classmethod def _addvals(cls): - setattr(cls, "all gender", - PermissibleValue(text="all gender") ) - setattr(cls, "gender neurtral", - PermissibleValue(text="gender neurtral") ) - setattr(cls, "male and female", - PermissibleValue(text="male and female") ) + setattr(cls, "Continental - Alluvial", + PermissibleValue(text="Continental - Alluvial")) + setattr(cls, "Continental - Aeolian", + PermissibleValue(text="Continental - Aeolian")) + setattr(cls, "Continental - Fluvial", + PermissibleValue(text="Continental - Fluvial")) + setattr(cls, "Continental - Lacustrine", + PermissibleValue(text="Continental - Lacustrine")) + setattr(cls, "Transitional - Deltaic", + PermissibleValue(text="Transitional - Deltaic")) + setattr(cls, "Transitional - Tidal", + PermissibleValue(text="Transitional - Tidal")) + setattr(cls, "Transitional - Lagoonal", + PermissibleValue(text="Transitional - Lagoonal")) + setattr(cls, "Transitional - Beach", + PermissibleValue(text="Transitional - Beach")) + setattr(cls, "Transitional - Lake", + PermissibleValue(text="Transitional - Lake")) + setattr(cls, "Marine - Shallow", + PermissibleValue(text="Marine - Shallow")) + setattr(cls, "Marine - Deep", + PermissibleValue(text="Marine - Deep")) + setattr(cls, "Marine - Reef", + PermissibleValue(text="Marine - Reef")) + setattr(cls, "Other - Evaporite", + PermissibleValue(text="Other - Evaporite")) + setattr(cls, "Other - Glacial", + PermissibleValue(text="Other - Glacial")) + setattr(cls, "Other - Volcanic", + PermissibleValue(text="Other - Volcanic")) class HcProducedEnum(EnumDefinitionImpl): @@ -11806,33 +12215,20 @@ class HcProducedEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "Gas-Condensate", - PermissibleValue(text="Gas-Condensate") ) + PermissibleValue(text="Gas-Condensate")) setattr(cls, "Coalbed Methane", - PermissibleValue(text="Coalbed Methane") ) + PermissibleValue(text="Coalbed Methane")) -class HcrEnum(EnumDefinitionImpl): +class OxyStatSampEnum(EnumDefinitionImpl): - Coalbed = PermissibleValue(text="Coalbed") - Shale = PermissibleValue(text="Shale") + aerobic = PermissibleValue(text="aerobic") + anaerobic = PermissibleValue(text="anaerobic") other = PermissibleValue(text="other") _defn = EnumDefinition( - name="HcrEnum", + name="OxyStatSampEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "Oil Reservoir", - PermissibleValue(text="Oil Reservoir") ) - setattr(cls, "Gas Reservoir", - PermissibleValue(text="Gas Reservoir") ) - setattr(cls, "Oil Sand", - PermissibleValue(text="Oil Sand") ) - setattr(cls, "Tight Oil Reservoir", - PermissibleValue(text="Tight Oil Reservoir") ) - setattr(cls, "Tight Gas Reservoir", - PermissibleValue(text="Tight Gas Reservoir") ) - class LithologyEnum(EnumDefinitionImpl): Basement = PermissibleValue(text="Basement") @@ -11853,77 +12249,6 @@ class LithologyEnum(EnumDefinitionImpl): name="LithologyEnum", ) -class SampCollectPointEnum(EnumDefinitionImpl): - - well = PermissibleValue(text="well") - wellhead = PermissibleValue(text="wellhead") - separator = PermissibleValue(text="separator") - other = PermissibleValue(text="other") - - _defn = EnumDefinition( - name="SampCollectPointEnum", - ) - - @classmethod - def _addvals(cls): - setattr(cls, "test well", - PermissibleValue(text="test well") ) - setattr(cls, "drilling rig", - PermissibleValue(text="drilling rig") ) - setattr(cls, "storage tank", - PermissibleValue(text="storage tank") ) - -class OxyStatSampEnum(EnumDefinitionImpl): - - aerobic = PermissibleValue(text="aerobic") - anaerobic = PermissibleValue(text="anaerobic") - other = PermissibleValue(text="other") - - _defn = EnumDefinition( - name="OxyStatSampEnum", - ) - -class DeposEnvEnum(EnumDefinitionImpl): - - other = PermissibleValue(text="other") - - _defn = EnumDefinition( - name="DeposEnvEnum", - ) - - @classmethod - def _addvals(cls): - setattr(cls, "Continental - Alluvial", - PermissibleValue(text="Continental - Alluvial") ) - setattr(cls, "Continental - Aeolian", - PermissibleValue(text="Continental - Aeolian") ) - setattr(cls, "Continental - Fluvial", - PermissibleValue(text="Continental - Fluvial") ) - setattr(cls, "Continental - Lacustrine", - PermissibleValue(text="Continental - Lacustrine") ) - setattr(cls, "Transitional - Deltaic", - PermissibleValue(text="Transitional - Deltaic") ) - setattr(cls, "Transitional - Tidal", - PermissibleValue(text="Transitional - Tidal") ) - setattr(cls, "Transitional - Lagoonal", - PermissibleValue(text="Transitional - Lagoonal") ) - setattr(cls, "Transitional - Beach", - PermissibleValue(text="Transitional - Beach") ) - setattr(cls, "Transitional - Lake", - PermissibleValue(text="Transitional - Lake") ) - setattr(cls, "Marine - Shallow", - PermissibleValue(text="Marine - Shallow") ) - setattr(cls, "Marine - Deep", - PermissibleValue(text="Marine - Deep") ) - setattr(cls, "Marine - Reef", - PermissibleValue(text="Marine - Reef") ) - setattr(cls, "Other - Evaporite", - PermissibleValue(text="Other - Evaporite") ) - setattr(cls, "Other - Glacial", - PermissibleValue(text="Other - Glacial") ) - setattr(cls, "Other - Volcanic", - PermissibleValue(text="Other - Volcanic") ) - class HcrGeolAgeEnum(EnumDefinitionImpl): Archean = PermissibleValue(text="Archean") @@ -11949,6 +12274,29 @@ class HcrGeolAgeEnum(EnumDefinitionImpl): name="HcrGeolAgeEnum", ) +class HcrEnum(EnumDefinitionImpl): + + Coalbed = PermissibleValue(text="Coalbed") + Shale = PermissibleValue(text="Shale") + other = PermissibleValue(text="other") + + _defn = EnumDefinition( + name="HcrEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "Oil Reservoir", + PermissibleValue(text="Oil Reservoir")) + setattr(cls, "Gas Reservoir", + PermissibleValue(text="Gas Reservoir")) + setattr(cls, "Oil Sand", + PermissibleValue(text="Oil Sand")) + setattr(cls, "Tight Oil Reservoir", + PermissibleValue(text="Tight Oil Reservoir")) + setattr(cls, "Tight Gas Reservoir", + PermissibleValue(text="Tight Gas Reservoir")) + class SampSubtypeEnum(EnumDefinitionImpl): biofilm = PermissibleValue(text="biofilm") @@ -11961,11 +12309,43 @@ class SampSubtypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "oil phase", - PermissibleValue(text="oil phase") ) + PermissibleValue(text="oil phase")) setattr(cls, "water phase", - PermissibleValue(text="water phase") ) + PermissibleValue(text="water phase")) setattr(cls, "not applicable", - PermissibleValue(text="not applicable") ) + PermissibleValue(text="not applicable")) + +class SampCollectPointEnum(EnumDefinitionImpl): + + well = PermissibleValue(text="well") + wellhead = PermissibleValue(text="wellhead") + separator = PermissibleValue(text="separator") + other = PermissibleValue(text="other") + + _defn = EnumDefinition( + name="SampCollectPointEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "test well", + PermissibleValue(text="test well")) + setattr(cls, "drilling rig", + PermissibleValue(text="drilling rig")) + setattr(cls, "storage tank", + PermissibleValue(text="storage tank")) + +class SrDepEnvEnum(EnumDefinitionImpl): + + Lacustine = PermissibleValue(text="Lacustine") + Fluvioldeltaic = PermissibleValue(text="Fluvioldeltaic") + Fluviomarine = PermissibleValue(text="Fluviomarine") + Marine = PermissibleValue(text="Marine") + other = PermissibleValue(text="other") + + _defn = EnumDefinition( + name="SrDepEnvEnum", + ) class SrLithologyEnum(EnumDefinitionImpl): @@ -11990,25 +12370,13 @@ class SrKerogTypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "Type I", - PermissibleValue(text="Type I") ) + PermissibleValue(text="Type I")) setattr(cls, "Type II", - PermissibleValue(text="Type II") ) + PermissibleValue(text="Type II")) setattr(cls, "Type III", - PermissibleValue(text="Type III") ) + PermissibleValue(text="Type III")) setattr(cls, "Type IV", - PermissibleValue(text="Type IV") ) - -class SrDepEnvEnum(EnumDefinitionImpl): - - Lacustine = PermissibleValue(text="Lacustine") - Fluvioldeltaic = PermissibleValue(text="Fluvioldeltaic") - Fluviomarine = PermissibleValue(text="Fluviomarine") - Marine = PermissibleValue(text="Marine") - other = PermissibleValue(text="other") - - _defn = EnumDefinition( - name="SrDepEnvEnum", - ) + PermissibleValue(text="Type IV")) class SrGeolAgeEnum(EnumDefinitionImpl): @@ -12035,6 +12403,18 @@ class SrGeolAgeEnum(EnumDefinitionImpl): name="SrGeolAgeEnum", ) +class ProfilePositionEnum(EnumDefinitionImpl): + + summit = PermissibleValue(text="summit") + shoulder = PermissibleValue(text="shoulder") + backslope = PermissibleValue(text="backslope") + footslope = PermissibleValue(text="footslope") + toeslope = PermissibleValue(text="toeslope") + + _defn = EnumDefinition( + name="ProfilePositionEnum", + ) + class BioticRelationshipEnum(EnumDefinitionImpl): parasite = PermissibleValue(text="parasite") @@ -12048,41 +12428,77 @@ class BioticRelationshipEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "free living", - PermissibleValue(text="free living") ) + PermissibleValue(text="free living")) -class FaoClassEnum(EnumDefinitionImpl): +class SoilHorizonEnum(EnumDefinitionImpl): - Acrisols = PermissibleValue(text="Acrisols") - Andosols = PermissibleValue(text="Andosols") - Arenosols = PermissibleValue(text="Arenosols") - Cambisols = PermissibleValue(text="Cambisols") - Chernozems = PermissibleValue(text="Chernozems") - Ferralsols = PermissibleValue(text="Ferralsols") - Fluvisols = PermissibleValue(text="Fluvisols") - Gleysols = PermissibleValue(text="Gleysols") - Greyzems = PermissibleValue(text="Greyzems") - Gypsisols = PermissibleValue(text="Gypsisols") - Histosols = PermissibleValue(text="Histosols") - Kastanozems = PermissibleValue(text="Kastanozems") - Lithosols = PermissibleValue(text="Lithosols") - Luvisols = PermissibleValue(text="Luvisols") - Nitosols = PermissibleValue(text="Nitosols") - Phaeozems = PermissibleValue(text="Phaeozems") - Planosols = PermissibleValue(text="Planosols") - Podzols = PermissibleValue(text="Podzols") - Podzoluvisols = PermissibleValue(text="Podzoluvisols") - Rankers = PermissibleValue(text="Rankers") - Regosols = PermissibleValue(text="Regosols") - Rendzinas = PermissibleValue(text="Rendzinas") - Solonchaks = PermissibleValue(text="Solonchaks") - Solonetz = PermissibleValue(text="Solonetz") - Vertisols = PermissibleValue(text="Vertisols") - Yermosols = PermissibleValue(text="Yermosols") + Permafrost = PermissibleValue(text="Permafrost") + + _defn = EnumDefinition( + name="SoilHorizonEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "O horizon", + PermissibleValue(text="O horizon")) + setattr(cls, "A horizon", + PermissibleValue(text="A horizon")) + setattr(cls, "E horizon", + PermissibleValue(text="E horizon")) + setattr(cls, "B horizon", + PermissibleValue(text="B horizon")) + setattr(cls, "C horizon", + PermissibleValue(text="C horizon")) + setattr(cls, "R layer", + PermissibleValue(text="R layer")) + setattr(cls, "M horizon", + PermissibleValue(text="M horizon")) + +class DrainageClassEnum(EnumDefinitionImpl): + + poorly = PermissibleValue(text="poorly") + well = PermissibleValue(text="well") _defn = EnumDefinition( - name="FaoClassEnum", + name="DrainageClassEnum", + ) + + @classmethod + def _addvals(cls): + setattr(cls, "very poorly", + PermissibleValue(text="very poorly")) + setattr(cls, "somewhat poorly", + PermissibleValue(text="somewhat poorly")) + setattr(cls, "moderately well", + PermissibleValue(text="moderately well")) + setattr(cls, "excessively drained", + PermissibleValue(text="excessively drained")) + +class TillageEnum(EnumDefinitionImpl): + + drill = PermissibleValue(text="drill") + chisel = PermissibleValue(text="chisel") + tined = PermissibleValue(text="tined") + mouldboard = PermissibleValue(text="mouldboard") + + _defn = EnumDefinition( + name="TillageEnum", ) + @classmethod + def _addvals(cls): + setattr(cls, "cutting disc", + PermissibleValue(text="cutting disc")) + setattr(cls, "ridge till", + PermissibleValue(text="ridge till")) + setattr(cls, "strip tillage", + PermissibleValue(text="strip tillage")) + setattr(cls, "zonal tillage", + PermissibleValue(text="zonal tillage")) + setattr(cls, "disc plough", + PermissibleValue(text="disc plough")) + class CurLandUseEnum(EnumDefinitionImpl): badlands = PermissibleValue(text="badlands") @@ -12111,120 +12527,140 @@ class CurLandUseEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "crop trees", - PermissibleValue(text="crop trees") ) + PermissibleValue(text="crop trees")) setattr(cls, "horticultural plants", - PermissibleValue(text="horticultural plants") ) + PermissibleValue(text="horticultural plants")) setattr(cls, "industrial areas", - PermissibleValue(text="industrial areas") ) + PermissibleValue(text="industrial areas")) setattr(cls, "intermixed hardwood and conifers", - PermissibleValue(text="intermixed hardwood and conifers") ) + PermissibleValue(text="intermixed hardwood and conifers")) setattr(cls, "mines/quarries", - PermissibleValue(text="mines/quarries") ) + PermissibleValue(text="mines/quarries")) setattr(cls, "oil waste areas", - PermissibleValue(text="oil waste areas") ) + PermissibleValue(text="oil waste areas")) setattr(cls, "permanent snow or ice", - PermissibleValue(text="permanent snow or ice") ) + PermissibleValue(text="permanent snow or ice")) setattr(cls, "roads/railroads", - PermissibleValue(text="roads/railroads") ) + PermissibleValue(text="roads/railroads")) setattr(cls, "row crops", - PermissibleValue(text="row crops") ) + PermissibleValue(text="row crops")) setattr(cls, "saline seeps", - PermissibleValue(text="saline seeps") ) + PermissibleValue(text="saline seeps")) setattr(cls, "salt flats", - PermissibleValue(text="salt flats") ) + PermissibleValue(text="salt flats")) setattr(cls, "shrub crops", - PermissibleValue(text="shrub crops") ) + PermissibleValue(text="shrub crops")) setattr(cls, "shrub land", - PermissibleValue(text="shrub land") ) + PermissibleValue(text="shrub land")) setattr(cls, "small grains", - PermissibleValue(text="small grains") ) + PermissibleValue(text="small grains")) setattr(cls, "successional shrub land", - PermissibleValue(text="successional shrub land") ) + PermissibleValue(text="successional shrub land")) setattr(cls, "vegetable crops", - PermissibleValue(text="vegetable crops") ) + PermissibleValue(text="vegetable crops")) setattr(cls, "vine crops", - PermissibleValue(text="vine crops") ) + PermissibleValue(text="vine crops")) -class SoilHorizonEnum(EnumDefinitionImpl): +class FaoClassEnum(EnumDefinitionImpl): - Permafrost = PermissibleValue(text="Permafrost") + Acrisols = PermissibleValue(text="Acrisols") + Andosols = PermissibleValue(text="Andosols") + Arenosols = PermissibleValue(text="Arenosols") + Cambisols = PermissibleValue(text="Cambisols") + Chernozems = PermissibleValue(text="Chernozems") + Ferralsols = PermissibleValue(text="Ferralsols") + Fluvisols = PermissibleValue(text="Fluvisols") + Gleysols = PermissibleValue(text="Gleysols") + Greyzems = PermissibleValue(text="Greyzems") + Gypsisols = PermissibleValue(text="Gypsisols") + Histosols = PermissibleValue(text="Histosols") + Kastanozems = PermissibleValue(text="Kastanozems") + Lithosols = PermissibleValue(text="Lithosols") + Luvisols = PermissibleValue(text="Luvisols") + Nitosols = PermissibleValue(text="Nitosols") + Phaeozems = PermissibleValue(text="Phaeozems") + Planosols = PermissibleValue(text="Planosols") + Podzols = PermissibleValue(text="Podzols") + Podzoluvisols = PermissibleValue(text="Podzoluvisols") + Rankers = PermissibleValue(text="Rankers") + Regosols = PermissibleValue(text="Regosols") + Rendzinas = PermissibleValue(text="Rendzinas") + Solonchaks = PermissibleValue(text="Solonchaks") + Solonetz = PermissibleValue(text="Solonetz") + Vertisols = PermissibleValue(text="Vertisols") + Yermosols = PermissibleValue(text="Yermosols") _defn = EnumDefinition( - name="SoilHorizonEnum", + name="FaoClassEnum", ) - @classmethod - def _addvals(cls): - setattr(cls, "O horizon", - PermissibleValue(text="O horizon") ) - setattr(cls, "A horizon", - PermissibleValue(text="A horizon") ) - setattr(cls, "E horizon", - PermissibleValue(text="E horizon") ) - setattr(cls, "B horizon", - PermissibleValue(text="B horizon") ) - setattr(cls, "C horizon", - PermissibleValue(text="C horizon") ) - setattr(cls, "R layer", - PermissibleValue(text="R layer") ) - setattr(cls, "M horizon", - PermissibleValue(text="M horizon") ) - -class ProfilePositionEnum(EnumDefinitionImpl): +class PlantSexEnum(EnumDefinitionImpl): - summit = PermissibleValue(text="summit") - shoulder = PermissibleValue(text="shoulder") - backslope = PermissibleValue(text="backslope") - footslope = PermissibleValue(text="footslope") - toeslope = PermissibleValue(text="toeslope") + Androdioecious = PermissibleValue(text="Androdioecious") + Androecious = PermissibleValue(text="Androecious") + Androgynous = PermissibleValue(text="Androgynous") + Androgynomonoecious = PermissibleValue(text="Androgynomonoecious") + Andromonoecious = PermissibleValue(text="Andromonoecious") + Bisexual = PermissibleValue(text="Bisexual") + Dichogamous = PermissibleValue(text="Dichogamous") + Diclinous = PermissibleValue(text="Diclinous") + Dioecious = PermissibleValue(text="Dioecious") + Gynodioecious = PermissibleValue(text="Gynodioecious") + Gynoecious = PermissibleValue(text="Gynoecious") + Gynomonoecious = PermissibleValue(text="Gynomonoecious") + Hermaphroditic = PermissibleValue(text="Hermaphroditic") + Imperfect = PermissibleValue(text="Imperfect") + Monoclinous = PermissibleValue(text="Monoclinous") + Monoecious = PermissibleValue(text="Monoecious") + Perfect = PermissibleValue(text="Perfect") + Polygamodioecious = PermissibleValue(text="Polygamodioecious") + Polygamomonoecious = PermissibleValue(text="Polygamomonoecious") + Polygamous = PermissibleValue(text="Polygamous") + Protandrous = PermissibleValue(text="Protandrous") + Protogynous = PermissibleValue(text="Protogynous") + Subandroecious = PermissibleValue(text="Subandroecious") + Subdioecious = PermissibleValue(text="Subdioecious") + Subgynoecious = PermissibleValue(text="Subgynoecious") + Synoecious = PermissibleValue(text="Synoecious") + Trimonoecious = PermissibleValue(text="Trimonoecious") + Trioecious = PermissibleValue(text="Trioecious") + Unisexual = PermissibleValue(text="Unisexual") _defn = EnumDefinition( - name="ProfilePositionEnum", + name="PlantSexEnum", ) -class TillageEnum(EnumDefinitionImpl): +class SampDisStageEnum(EnumDefinitionImpl): - drill = PermissibleValue(text="drill") - chisel = PermissibleValue(text="chisel") - tined = PermissibleValue(text="tined") - mouldboard = PermissibleValue(text="mouldboard") + dissemination = PermissibleValue(text="dissemination") + infection = PermissibleValue(text="infection") + inoculation = PermissibleValue(text="inoculation") + penetration = PermissibleValue(text="penetration") + other = PermissibleValue(text="other") _defn = EnumDefinition( - name="TillageEnum", + name="SampDisStageEnum", ) @classmethod def _addvals(cls): - setattr(cls, "cutting disc", - PermissibleValue(text="cutting disc") ) - setattr(cls, "ridge till", - PermissibleValue(text="ridge till") ) - setattr(cls, "strip tillage", - PermissibleValue(text="strip tillage") ) - setattr(cls, "zonal tillage", - PermissibleValue(text="zonal tillage") ) - setattr(cls, "disc plough", - PermissibleValue(text="disc plough") ) + setattr(cls, "growth and reproduction", + PermissibleValue(text="growth and reproduction")) -class DrainageClassEnum(EnumDefinitionImpl): +class GrowthHabitEnum(EnumDefinitionImpl): - poorly = PermissibleValue(text="poorly") - well = PermissibleValue(text="well") + erect = PermissibleValue(text="erect") + spreading = PermissibleValue(text="spreading") + prostrate = PermissibleValue(text="prostrate") _defn = EnumDefinition( - name="DrainageClassEnum", + name="GrowthHabitEnum", ) @classmethod def _addvals(cls): - setattr(cls, "very poorly", - PermissibleValue(text="very poorly") ) - setattr(cls, "somewhat poorly", - PermissibleValue(text="somewhat poorly") ) - setattr(cls, "moderately well", - PermissibleValue(text="moderately well") ) - setattr(cls, "excessively drained", - PermissibleValue(text="excessively drained") ) + setattr(cls, "semi-erect", + PermissibleValue(text="semi-erect")) class SampCaptStatusEnum(EnumDefinitionImpl): @@ -12237,30 +12673,13 @@ class SampCaptStatusEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "active surveillance in response to an outbreak", - PermissibleValue(text="active surveillance in response to an outbreak") ) + PermissibleValue(text="active surveillance in response to an outbreak")) setattr(cls, "active surveillance not initiated by an outbreak", - PermissibleValue(text="active surveillance not initiated by an outbreak") ) + PermissibleValue(text="active surveillance not initiated by an outbreak")) setattr(cls, "farm sample", - PermissibleValue(text="farm sample") ) + PermissibleValue(text="farm sample")) setattr(cls, "market sample", - PermissibleValue(text="market sample") ) - -class SampDisStageEnum(EnumDefinitionImpl): - - dissemination = PermissibleValue(text="dissemination") - infection = PermissibleValue(text="infection") - inoculation = PermissibleValue(text="inoculation") - penetration = PermissibleValue(text="penetration") - other = PermissibleValue(text="other") - - _defn = EnumDefinition( - name="SampDisStageEnum", - ) - - @classmethod - def _addvals(cls): - setattr(cls, "growth and reproduction", - PermissibleValue(text="growth and reproduction") ) + PermissibleValue(text="market sample")) class BiolStatEnum(EnumDefinitionImpl): @@ -12276,64 +12695,30 @@ class BiolStatEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "semi-natural", - PermissibleValue(text="semi-natural") ) + PermissibleValue(text="semi-natural")) setattr(cls, "inbred line", - PermissibleValue(text="inbred line") ) + PermissibleValue(text="inbred line")) setattr(cls, "breeder's line", - PermissibleValue(text="breeder's line") ) + PermissibleValue(text="breeder's line")) setattr(cls, "clonal selection", - PermissibleValue(text="clonal selection") ) - -class GrowthHabitEnum(EnumDefinitionImpl): + PermissibleValue(text="clonal selection")) - erect = PermissibleValue(text="erect") - spreading = PermissibleValue(text="spreading") - prostrate = PermissibleValue(text="prostrate") +class TidalStageEnum(EnumDefinitionImpl): _defn = EnumDefinition( - name="GrowthHabitEnum", + name="TidalStageEnum", ) @classmethod def _addvals(cls): - setattr(cls, "semi-erect", - PermissibleValue(text="semi-erect") ) - -class PlantSexEnum(EnumDefinitionImpl): - - Androdioecious = PermissibleValue(text="Androdioecious") - Androecious = PermissibleValue(text="Androecious") - Androgynous = PermissibleValue(text="Androgynous") - Androgynomonoecious = PermissibleValue(text="Androgynomonoecious") - Andromonoecious = PermissibleValue(text="Andromonoecious") - Bisexual = PermissibleValue(text="Bisexual") - Dichogamous = PermissibleValue(text="Dichogamous") - Diclinous = PermissibleValue(text="Diclinous") - Dioecious = PermissibleValue(text="Dioecious") - Gynodioecious = PermissibleValue(text="Gynodioecious") - Gynoecious = PermissibleValue(text="Gynoecious") - Gynomonoecious = PermissibleValue(text="Gynomonoecious") - Hermaphroditic = PermissibleValue(text="Hermaphroditic") - Imperfect = PermissibleValue(text="Imperfect") - Monoclinous = PermissibleValue(text="Monoclinous") - Monoecious = PermissibleValue(text="Monoecious") - Perfect = PermissibleValue(text="Perfect") - Polygamodioecious = PermissibleValue(text="Polygamodioecious") - Polygamomonoecious = PermissibleValue(text="Polygamomonoecious") - Polygamous = PermissibleValue(text="Polygamous") - Protandrous = PermissibleValue(text="Protandrous") - Protogynous = PermissibleValue(text="Protogynous") - Subandroecious = PermissibleValue(text="Subandroecious") - Subdioecious = PermissibleValue(text="Subdioecious") - Subgynoecious = PermissibleValue(text="Subgynoecious") - Synoecious = PermissibleValue(text="Synoecious") - Trimonoecious = PermissibleValue(text="Trimonoecious") - Trioecious = PermissibleValue(text="Trioecious") - Unisexual = PermissibleValue(text="Unisexual") - - _defn = EnumDefinition( - name="PlantSexEnum", - ) + setattr(cls, "low tide", + PermissibleValue(text="low tide")) + setattr(cls, "ebb tide", + PermissibleValue(text="ebb tide")) + setattr(cls, "flood tide", + PermissibleValue(text="flood tide")) + setattr(cls, "high tide", + PermissibleValue(text="high tide")) class SedimentTypeEnum(EnumDefinitionImpl): @@ -12346,23 +12731,6 @@ class SedimentTypeEnum(EnumDefinitionImpl): name="SedimentTypeEnum", ) -class TidalStageEnum(EnumDefinitionImpl): - - _defn = EnumDefinition( - name="TidalStageEnum", - ) - - @classmethod - def _addvals(cls): - setattr(cls, "low tide", - PermissibleValue(text="low tide") ) - setattr(cls, "ebb tide", - PermissibleValue(text="ebb tide") ) - setattr(cls, "flood tide", - PermissibleValue(text="flood tide") ) - setattr(cls, "high tide", - PermissibleValue(text="high tide") ) - class HostSexEnum(EnumDefinitionImpl): female = PermissibleValue(text="female") @@ -12388,7 +12756,7 @@ class AnalysisTypeEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "natural organic matter", - PermissibleValue(text="natural organic matter") ) + PermissibleValue(text="natural organic matter")) class DnaSampleFormatEnum(EnumDefinitionImpl): @@ -12407,15 +12775,15 @@ class DnaSampleFormatEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "10 mM Tris-HCl", - PermissibleValue(text="10 mM Tris-HCl") ) + PermissibleValue(text="10 mM Tris-HCl")) setattr(cls, "Low EDTA TE", - PermissibleValue(text="Low EDTA TE") ) + PermissibleValue(text="Low EDTA TE")) setattr(cls, "MDA reaction buffer", - PermissibleValue(text="MDA reaction buffer") ) + PermissibleValue(text="MDA reaction buffer")) setattr(cls, "Gentegra-DNA", - PermissibleValue(text="Gentegra-DNA") ) + PermissibleValue(text="Gentegra-DNA")) setattr(cls, "Gentegra-RNA", - PermissibleValue(text="Gentegra-RNA") ) + PermissibleValue(text="Gentegra-RNA")) class RnaSampleFormatEnum(EnumDefinitionImpl): @@ -12434,15 +12802,15 @@ class RnaSampleFormatEnum(EnumDefinitionImpl): @classmethod def _addvals(cls): setattr(cls, "10 mM Tris-HCl", - PermissibleValue(text="10 mM Tris-HCl") ) + PermissibleValue(text="10 mM Tris-HCl")) setattr(cls, "Low EDTA TE", - PermissibleValue(text="Low EDTA TE") ) + PermissibleValue(text="Low EDTA TE")) setattr(cls, "MDA reaction buffer", - PermissibleValue(text="MDA reaction buffer") ) + PermissibleValue(text="MDA reaction buffer")) setattr(cls, "Gentegra-DNA", - PermissibleValue(text="Gentegra-DNA") ) + PermissibleValue(text="Gentegra-DNA")) setattr(cls, "Gentegra-RNA", - PermissibleValue(text="Gentegra-RNA") ) + PermissibleValue(text="Gentegra-RNA")) class SampleTypeEnum(EnumDefinitionImpl): @@ -14176,14 +14544,24 @@ class slots: slots.zinc = Slot(uri=NMDC_SUB_SCHEMA.zinc, name="zinc", curie=NMDC_SUB_SCHEMA.curie('zinc'), model_uri=NMDC_SUB_SCHEMA.zinc, domain=None, range=Optional[str]) -slots.gold_path_field = Slot(uri=NMDC_SUB_SCHEMA.gold_path_field, name="gold_path_field", curie=NMDC_SUB_SCHEMA.curie('gold_path_field'), - model_uri=NMDC_SUB_SCHEMA.gold_path_field, domain=None, range=Optional[str]) +slots.description = Slot(uri=DCTERMS.description, name="description", curie=DCTERMS.curie('description'), + model_uri=NMDC_SUB_SCHEMA.description, domain=None, range=Optional[str]) -slots.nucleic_acid_sequence_source_field = Slot(uri=NMDC_SUB_SCHEMA.nucleic_acid_sequence_source_field, name="nucleic acid sequence source field", curie=NMDC_SUB_SCHEMA.curie('nucleic_acid_sequence_source_field'), - model_uri=NMDC_SUB_SCHEMA.nucleic_acid_sequence_source_field, domain=None, range=Optional[str]) +slots.id = Slot(uri=NMDC_SUB_SCHEMA.id, name="id", curie=NMDC_SUB_SCHEMA.curie('id'), + model_uri=NMDC_SUB_SCHEMA.id, domain=None, range=URIRef) slots.alternative_identifiers = Slot(uri=NMDC_SUB_SCHEMA.alternative_identifiers, name="alternative_identifiers", curie=NMDC_SUB_SCHEMA.curie('alternative_identifiers'), - model_uri=NMDC_SUB_SCHEMA.alternative_identifiers, domain=None, range=Optional[str]) + model_uri=NMDC_SUB_SCHEMA.alternative_identifiers, domain=None, range=Optional[Union[Union[str, URIorCURIE], List[Union[str, URIorCURIE]]]], + pattern=re.compile(r'^[a-zA-Z_][a-zA-Z0-9_]*:[a-zA-Z_][a-zA-Z0-9_]*$')) + +slots.investigation_field = Slot(uri=NMDC_SUB_SCHEMA.investigation_field, name="investigation field", curie=NMDC_SUB_SCHEMA.curie('investigation_field'), + model_uri=NMDC_SUB_SCHEMA.investigation_field, domain=None, range=Optional[str]) + +slots.name = Slot(uri=NMDC_SUB_SCHEMA.name, name="name", curie=NMDC_SUB_SCHEMA.curie('name'), + model_uri=NMDC_SUB_SCHEMA.name, domain=None, range=Optional[str]) + +slots.gold_path_field = Slot(uri=NMDC_SUB_SCHEMA.gold_path_field, name="gold_path_field", curie=NMDC_SUB_SCHEMA.curie('gold_path_field'), + model_uri=NMDC_SUB_SCHEMA.gold_path_field, domain=None, range=Optional[str]) slots.attribute = Slot(uri=NMDC_SUB_SCHEMA.attribute, name="attribute", curie=NMDC_SUB_SCHEMA.curie('attribute'), model_uri=NMDC_SUB_SCHEMA.attribute, domain=None, range=Optional[str]) @@ -14191,23 +14569,17 @@ class slots: slots.environment_field = Slot(uri=NMDC_SUB_SCHEMA.environment_field, name="environment field", curie=NMDC_SUB_SCHEMA.curie('environment_field'), model_uri=NMDC_SUB_SCHEMA.environment_field, domain=None, range=Optional[str]) -slots.investigation_field = Slot(uri=NMDC_SUB_SCHEMA.investigation_field, name="investigation field", curie=NMDC_SUB_SCHEMA.curie('investigation_field'), - model_uri=NMDC_SUB_SCHEMA.investigation_field, domain=None, range=Optional[str]) +slots.nucleic_acid_sequence_source_field = Slot(uri=NMDC_SUB_SCHEMA.nucleic_acid_sequence_source_field, name="nucleic acid sequence source field", curie=NMDC_SUB_SCHEMA.curie('nucleic_acid_sequence_source_field'), + model_uri=NMDC_SUB_SCHEMA.nucleic_acid_sequence_source_field, domain=None, range=Optional[str]) -slots.description = Slot(uri=DCTERMS.description, name="description", curie=DCTERMS.curie('description'), - model_uri=NMDC_SUB_SCHEMA.description, domain=None, range=Optional[str]) +slots.core_field = Slot(uri=NMDC_SUB_SCHEMA.core_field, name="core field", curie=NMDC_SUB_SCHEMA.curie('core_field'), + model_uri=NMDC_SUB_SCHEMA.core_field, domain=None, range=Optional[str]) slots.language = Slot(uri=NMDC_SUB_SCHEMA.language, name="language", curie=NMDC_SUB_SCHEMA.curie('language'), model_uri=NMDC_SUB_SCHEMA.language, domain=None, range=Optional[str]) -slots.name = Slot(uri=NMDC_SUB_SCHEMA.name, name="name", curie=NMDC_SUB_SCHEMA.curie('name'), - model_uri=NMDC_SUB_SCHEMA.name, domain=None, range=Optional[str]) - -slots.core_field = Slot(uri=NMDC_SUB_SCHEMA.core_field, name="core field", curie=NMDC_SUB_SCHEMA.curie('core_field'), - model_uri=NMDC_SUB_SCHEMA.core_field, domain=None, range=Optional[str]) - -slots.id = Slot(uri=NMDC_SUB_SCHEMA.id, name="id", curie=NMDC_SUB_SCHEMA.curie('id'), - model_uri=NMDC_SUB_SCHEMA.id, domain=None, range=URIRef) +slots.biomaterial_purity = Slot(uri=NMDC_SUB_SCHEMA.biomaterial_purity, name="biomaterial_purity", curie=NMDC_SUB_SCHEMA.curie('biomaterial_purity'), + model_uri=NMDC_SUB_SCHEMA.biomaterial_purity, domain=None, range=Optional[str]) slots.AirInterface_air_PM_concen = Slot(uri=MIXS['0000108'], name="AirInterface_air_PM_concen", curie=MIXS.curie('0000108'), model_uri=NMDC_SUB_SCHEMA.AirInterface_air_PM_concen, domain=AirInterface, range=Optional[str], @@ -14241,16 +14613,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.AirInterface_depth, domain=AirInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?(\s*-\s*[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?)?$')) -slots.AirInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="AirInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.AirInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="AirInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.AirInterface_ecosystem, domain=AirInterface, range=Optional[str]) -slots.AirInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="AirInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.AirInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="AirInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.AirInterface_ecosystem_category, domain=AirInterface, range=Optional[str]) -slots.AirInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="AirInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.AirInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="AirInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.AirInterface_ecosystem_subtype, domain=AirInterface, range=Optional[str]) -slots.AirInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="AirInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.AirInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="AirInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.AirInterface_ecosystem_type, domain=AirInterface, range=Optional[str]) slots.AirInterface_elev = Slot(uri=MIXS['0000093'], name="AirInterface_elev", curie=MIXS.curie('0000093'), @@ -14268,7 +14640,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.AirInterface_env_medium, domain=AirInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.AirInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="AirInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.AirInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="AirInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.AirInterface_env_package, domain=AirInterface, range=str) slots.AirInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="AirInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -14342,7 +14714,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.AirInterface_samp_store_temp, domain=AirInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.AirInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="AirInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.AirInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="AirInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.AirInterface_sample_link, domain=AirInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -14353,7 +14725,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.AirInterface_solar_irradiance, domain=AirInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.AirInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="AirInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.AirInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="AirInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.AirInterface_specific_ecosystem, domain=AirInterface, range=Optional[str]) slots.AirInterface_temp = Slot(uri=MIXS['0000113'], name="AirInterface_temp", curie=MIXS.curie('0000113'), @@ -14470,16 +14842,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_diss_oxygen, domain=BiofilmInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.BiofilmInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="BiofilmInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.BiofilmInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="BiofilmInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_ecosystem, domain=BiofilmInterface, range=Optional[str]) -slots.BiofilmInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="BiofilmInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.BiofilmInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="BiofilmInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_ecosystem_category, domain=BiofilmInterface, range=Optional[str]) -slots.BiofilmInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="BiofilmInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.BiofilmInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="BiofilmInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_ecosystem_subtype, domain=BiofilmInterface, range=Optional[str]) -slots.BiofilmInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="BiofilmInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.BiofilmInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="BiofilmInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_ecosystem_type, domain=BiofilmInterface, range=Optional[str]) slots.BiofilmInterface_elev = Slot(uri=MIXS['0000093'], name="BiofilmInterface_elev", curie=MIXS.curie('0000093'), @@ -14497,7 +14869,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_env_medium, domain=BiofilmInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.BiofilmInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="BiofilmInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.BiofilmInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="BiofilmInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_env_package, domain=BiofilmInterface, range=str) slots.BiofilmInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="BiofilmInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -14641,7 +15013,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_samp_store_temp, domain=BiofilmInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.BiofilmInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="BiofilmInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.BiofilmInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="BiofilmInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_sample_link, domain=BiofilmInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -14656,7 +15028,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_sodium, domain=BiofilmInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.BiofilmInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="BiofilmInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.BiofilmInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="BiofilmInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.BiofilmInterface_specific_ecosystem, domain=BiofilmInterface, range=Optional[str]) slots.BiofilmInterface_sulfate = Slot(uri=MIXS['0000423'], name="BiofilmInterface_sulfate", curie=MIXS.curie('0000423'), @@ -14840,16 +15212,16 @@ class slots: slots.BuiltEnvInterface_drawings = Slot(uri=MIXS['0000798'], name="BuiltEnvInterface_drawings", curie=MIXS.curie('0000798'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_drawings, domain=BuiltEnvInterface, range=Optional[Union[str, "DrawingsEnum"]]) -slots.BuiltEnvInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="BuiltEnvInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.BuiltEnvInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="BuiltEnvInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_ecosystem, domain=BuiltEnvInterface, range=Optional[str]) -slots.BuiltEnvInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="BuiltEnvInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.BuiltEnvInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="BuiltEnvInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_ecosystem_category, domain=BuiltEnvInterface, range=Optional[str]) -slots.BuiltEnvInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="BuiltEnvInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.BuiltEnvInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="BuiltEnvInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_ecosystem_subtype, domain=BuiltEnvInterface, range=Optional[str]) -slots.BuiltEnvInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="BuiltEnvInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.BuiltEnvInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="BuiltEnvInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_ecosystem_type, domain=BuiltEnvInterface, range=Optional[str]) slots.BuiltEnvInterface_elev = Slot(uri=MIXS['0000093'], name="BuiltEnvInterface_elev", curie=MIXS.curie('0000093'), @@ -14870,7 +15242,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_env_medium, domain=BuiltEnvInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.BuiltEnvInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="BuiltEnvInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.BuiltEnvInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="BuiltEnvInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_env_package, domain=BuiltEnvInterface, range=str) slots.BuiltEnvInterface_escalator = Slot(uri=MIXS['0000800'], name="BuiltEnvInterface_escalator", curie=MIXS.curie('0000800'), @@ -15118,7 +15490,7 @@ class slots: slots.BuiltEnvInterface_samp_weather = Slot(uri=MIXS['0000827'], name="BuiltEnvInterface_samp_weather", curie=MIXS.curie('0000827'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_samp_weather, domain=BuiltEnvInterface, range=Optional[Union[str, "SampWeatherEnum"]]) -slots.BuiltEnvInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="BuiltEnvInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.BuiltEnvInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="BuiltEnvInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_sample_link, domain=BuiltEnvInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -15153,7 +15525,7 @@ class slots: slots.BuiltEnvInterface_specific = Slot(uri=MIXS['0000836'], name="BuiltEnvInterface_specific", curie=MIXS.curie('0000836'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_specific, domain=BuiltEnvInterface, range=Optional[Union[str, "SpecificEnum"]]) -slots.BuiltEnvInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="BuiltEnvInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.BuiltEnvInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="BuiltEnvInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_specific_ecosystem, domain=BuiltEnvInterface, range=Optional[str]) slots.BuiltEnvInterface_specific_humidity = Slot(uri=MIXS['0000214'], name="BuiltEnvInterface_specific_humidity", curie=MIXS.curie('0000214'), @@ -15286,23 +15658,23 @@ class slots: slots.BuiltEnvInterface_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="BuiltEnvInterface_oxy_stat_samp", curie=MIXS.curie('0000753'), model_uri=NMDC_SUB_SCHEMA.BuiltEnvInterface_oxy_stat_samp, domain=BuiltEnvInterface, range=Optional[Union[str, "OxyStatSampEnum"]]) -slots.EmslInterface_emsl_store_temp = Slot(uri=NMDC_YAML['nmdc/emsl_store_temp'], name="EmslInterface_emsl_store_temp", curie=NMDC_YAML.curie('nmdc/emsl_store_temp'), +slots.EmslInterface_emsl_store_temp = Slot(uri=NMDC['nmdc/emsl_store_temp'], name="EmslInterface_emsl_store_temp", curie=NMDC.curie('nmdc/emsl_store_temp'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_emsl_store_temp, domain=EmslInterface, range=float) -slots.EmslInterface_project_id = Slot(uri=NMDC_YAML['nmdc/project_id'], name="EmslInterface_project_id", curie=NMDC_YAML.curie('nmdc/project_id'), +slots.EmslInterface_project_id = Slot(uri=NMDC['nmdc/project_id'], name="EmslInterface_project_id", curie=NMDC.curie('nmdc/project_id'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_project_id, domain=EmslInterface, range=str) -slots.EmslInterface_replicate_number = Slot(uri=NMDC_YAML['nmdc/replicate_number'], name="EmslInterface_replicate_number", curie=NMDC_YAML.curie('nmdc/replicate_number'), +slots.EmslInterface_replicate_number = Slot(uri=NMDC['nmdc/replicate_number'], name="EmslInterface_replicate_number", curie=NMDC.curie('nmdc/replicate_number'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_replicate_number, domain=EmslInterface, range=Optional[int]) -slots.EmslInterface_sample_shipped = Slot(uri=NMDC_YAML['nmdc/sample_shipped'], name="EmslInterface_sample_shipped", curie=NMDC_YAML.curie('nmdc/sample_shipped'), +slots.EmslInterface_sample_shipped = Slot(uri=NMDC['nmdc/sample_shipped'], name="EmslInterface_sample_shipped", curie=NMDC.curie('nmdc/sample_shipped'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_sample_shipped, domain=EmslInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? \S+$')) -slots.EmslInterface_sample_type = Slot(uri=NMDC_YAML['nmdc/sample_type'], name="EmslInterface_sample_type", curie=NMDC_YAML.curie('nmdc/sample_type'), +slots.EmslInterface_sample_type = Slot(uri=NMDC['nmdc/sample_type'], name="EmslInterface_sample_type", curie=NMDC.curie('nmdc/sample_type'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_sample_type, domain=EmslInterface, range=Union[str, "SampleTypeEnum"]) -slots.EmslInterface_technical_reps = Slot(uri=NMDC_YAML['nmdc/technical_reps'], name="EmslInterface_technical_reps", curie=NMDC_YAML.curie('nmdc/technical_reps'), +slots.EmslInterface_technical_reps = Slot(uri=NMDC['nmdc/technical_reps'], name="EmslInterface_technical_reps", curie=NMDC.curie('nmdc/technical_reps'), model_uri=NMDC_SUB_SCHEMA.EmslInterface_technical_reps, domain=EmslInterface, range=Optional[int]) slots.EmslInterface_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="EmslInterface_oxy_stat_samp", curie=MIXS.curie('0000753'), @@ -15392,16 +15764,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_diss_oxygen_fluid, domain=HcrCoresInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.HcrCoresInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="HcrCoresInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.HcrCoresInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="HcrCoresInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_ecosystem, domain=HcrCoresInterface, range=Optional[str]) -slots.HcrCoresInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="HcrCoresInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.HcrCoresInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="HcrCoresInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_ecosystem_category, domain=HcrCoresInterface, range=Optional[str]) -slots.HcrCoresInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="HcrCoresInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.HcrCoresInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="HcrCoresInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_ecosystem_subtype, domain=HcrCoresInterface, range=Optional[str]) -slots.HcrCoresInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="HcrCoresInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.HcrCoresInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="HcrCoresInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_ecosystem_type, domain=HcrCoresInterface, range=Optional[str]) slots.HcrCoresInterface_elev = Slot(uri=MIXS['0000093'], name="HcrCoresInterface_elev", curie=MIXS.curie('0000093'), @@ -15419,7 +15791,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_env_medium, domain=HcrCoresInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.HcrCoresInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="HcrCoresInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.HcrCoresInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="HcrCoresInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_env_package, domain=HcrCoresInterface, range=str) slots.HcrCoresInterface_ethylbenzene = Slot(uri=MIXS['0000155'], name="HcrCoresInterface_ethylbenzene", curie=MIXS.curie('0000155'), @@ -15573,7 +15945,7 @@ class slots: slots.HcrCoresInterface_samp_well_name = Slot(uri=MIXS['0000296'], name="HcrCoresInterface_samp_well_name", curie=MIXS.curie('0000296'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_samp_well_name, domain=HcrCoresInterface, range=Optional[str]) -slots.HcrCoresInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="HcrCoresInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.HcrCoresInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="HcrCoresInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_sample_link, domain=HcrCoresInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -15588,7 +15960,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_sodium, domain=HcrCoresInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.HcrCoresInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="HcrCoresInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.HcrCoresInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="HcrCoresInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.HcrCoresInterface_specific_ecosystem, domain=HcrCoresInterface, range=Optional[str]) slots.HcrCoresInterface_sr_dep_env = Slot(uri=MIXS['0000996'], name="HcrCoresInterface_sr_dep_env", curie=MIXS.curie('0000996'), @@ -15772,16 +16144,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_diss_oxygen_fluid, domain=HcrFluidsSwabsInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.HcrFluidsSwabsInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="HcrFluidsSwabsInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.HcrFluidsSwabsInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="HcrFluidsSwabsInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_ecosystem, domain=HcrFluidsSwabsInterface, range=Optional[str]) -slots.HcrFluidsSwabsInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="HcrFluidsSwabsInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.HcrFluidsSwabsInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="HcrFluidsSwabsInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_ecosystem_category, domain=HcrFluidsSwabsInterface, range=Optional[str]) -slots.HcrFluidsSwabsInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="HcrFluidsSwabsInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.HcrFluidsSwabsInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="HcrFluidsSwabsInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_ecosystem_subtype, domain=HcrFluidsSwabsInterface, range=Optional[str]) -slots.HcrFluidsSwabsInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="HcrFluidsSwabsInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.HcrFluidsSwabsInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="HcrFluidsSwabsInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_ecosystem_type, domain=HcrFluidsSwabsInterface, range=Optional[str]) slots.HcrFluidsSwabsInterface_elev = Slot(uri=MIXS['0000093'], name="HcrFluidsSwabsInterface_elev", curie=MIXS.curie('0000093'), @@ -15799,7 +16171,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_env_medium, domain=HcrFluidsSwabsInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.HcrFluidsSwabsInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="HcrFluidsSwabsInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.HcrFluidsSwabsInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="HcrFluidsSwabsInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_env_package, domain=HcrFluidsSwabsInterface, range=str) slots.HcrFluidsSwabsInterface_ethylbenzene = Slot(uri=MIXS['0000155'], name="HcrFluidsSwabsInterface_ethylbenzene", curie=MIXS.curie('0000155'), @@ -15960,7 +16332,7 @@ class slots: slots.HcrFluidsSwabsInterface_samp_well_name = Slot(uri=MIXS['0000296'], name="HcrFluidsSwabsInterface_samp_well_name", curie=MIXS.curie('0000296'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_samp_well_name, domain=HcrFluidsSwabsInterface, range=Optional[str]) -slots.HcrFluidsSwabsInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="HcrFluidsSwabsInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.HcrFluidsSwabsInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="HcrFluidsSwabsInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_sample_link, domain=HcrFluidsSwabsInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -15975,7 +16347,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_sodium, domain=HcrFluidsSwabsInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.HcrFluidsSwabsInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="HcrFluidsSwabsInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.HcrFluidsSwabsInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="HcrFluidsSwabsInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.HcrFluidsSwabsInterface_specific_ecosystem, domain=HcrFluidsSwabsInterface, range=Optional[str]) slots.HcrFluidsSwabsInterface_sulfate = Slot(uri=MIXS['0000423'], name="HcrFluidsSwabsInterface_sulfate", curie=MIXS.curie('0000423'), @@ -16086,16 +16458,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_depth, domain=HostAssociatedInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?(\s*-\s*[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?)?$')) -slots.HostAssociatedInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="HostAssociatedInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.HostAssociatedInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="HostAssociatedInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_ecosystem, domain=HostAssociatedInterface, range=Optional[str]) -slots.HostAssociatedInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="HostAssociatedInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.HostAssociatedInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="HostAssociatedInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_ecosystem_category, domain=HostAssociatedInterface, range=Optional[str]) -slots.HostAssociatedInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="HostAssociatedInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.HostAssociatedInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="HostAssociatedInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_ecosystem_subtype, domain=HostAssociatedInterface, range=Optional[str]) -slots.HostAssociatedInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="HostAssociatedInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.HostAssociatedInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="HostAssociatedInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_ecosystem_type, domain=HostAssociatedInterface, range=Optional[str]) slots.HostAssociatedInterface_elev = Slot(uri=MIXS['0000093'], name="HostAssociatedInterface_elev", curie=MIXS.curie('0000093'), @@ -16113,7 +16485,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_env_medium, domain=HostAssociatedInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.HostAssociatedInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="HostAssociatedInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.HostAssociatedInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="HostAssociatedInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_env_package, domain=HostAssociatedInterface, range=str) slots.HostAssociatedInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="HostAssociatedInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -16267,127 +16639,127 @@ class slots: model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_samp_store_temp, domain=HostAssociatedInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.HostAssociatedInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="HostAssociatedInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.HostAssociatedInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="HostAssociatedInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_sample_link, domain=HostAssociatedInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) slots.HostAssociatedInterface_size_frac = Slot(uri=MIXS['0000017'], name="HostAssociatedInterface_size_frac", curie=MIXS.curie('0000017'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_size_frac, domain=HostAssociatedInterface, range=Optional[str]) -slots.HostAssociatedInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="HostAssociatedInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.HostAssociatedInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="HostAssociatedInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_specific_ecosystem, domain=HostAssociatedInterface, range=Optional[str]) slots.HostAssociatedInterface_temp = Slot(uri=MIXS['0000113'], name="HostAssociatedInterface_temp", curie=MIXS.curie('0000113'), model_uri=NMDC_SUB_SCHEMA.HostAssociatedInterface_temp, domain=HostAssociatedInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.JgiMgInterface_dna_absorb1 = Slot(uri=NMDC_YAML['nmdc/dna_absorb1'], name="JgiMgInterface_dna_absorb1", curie=NMDC_YAML.curie('nmdc/dna_absorb1'), +slots.JgiMgInterface_dna_absorb1 = Slot(uri=NMDC['nmdc/dna_absorb1'], name="JgiMgInterface_dna_absorb1", curie=NMDC.curie('nmdc/dna_absorb1'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_absorb1, domain=JgiMgInterface, range=Optional[float]) -slots.JgiMgInterface_dna_absorb2 = Slot(uri=NMDC_YAML['nmdc/dna_absorb2'], name="JgiMgInterface_dna_absorb2", curie=NMDC_YAML.curie('nmdc/dna_absorb2'), +slots.JgiMgInterface_dna_absorb2 = Slot(uri=NMDC['nmdc/dna_absorb2'], name="JgiMgInterface_dna_absorb2", curie=NMDC.curie('nmdc/dna_absorb2'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_absorb2, domain=JgiMgInterface, range=Optional[float]) -slots.JgiMgInterface_dna_concentration = Slot(uri=NMDC_YAML['nmdc/dna_concentration'], name="JgiMgInterface_dna_concentration", curie=NMDC_YAML.curie('nmdc/dna_concentration'), +slots.JgiMgInterface_dna_concentration = Slot(uri=NMDC['nmdc/dna_concentration'], name="JgiMgInterface_dna_concentration", curie=NMDC.curie('nmdc/dna_concentration'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_concentration, domain=JgiMgInterface, range=float) -slots.JgiMgInterface_dna_cont_type = Slot(uri=NMDC_YAML['nmdc/dna_cont_type'], name="JgiMgInterface_dna_cont_type", curie=NMDC_YAML.curie('nmdc/dna_cont_type'), +slots.JgiMgInterface_dna_cont_type = Slot(uri=NMDC['nmdc/dna_cont_type'], name="JgiMgInterface_dna_cont_type", curie=NMDC.curie('nmdc/dna_cont_type'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_cont_type, domain=JgiMgInterface, range=Union[str, "JgiContTypeEnum"]) -slots.JgiMgInterface_dna_cont_well = Slot(uri=NMDC_YAML['nmdc/dna_cont_well'], name="JgiMgInterface_dna_cont_well", curie=NMDC_YAML.curie('nmdc/dna_cont_well'), +slots.JgiMgInterface_dna_cont_well = Slot(uri=NMDC['nmdc/dna_cont_well'], name="JgiMgInterface_dna_cont_well", curie=NMDC.curie('nmdc/dna_cont_well'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_cont_well, domain=JgiMgInterface, range=Optional[str], pattern=re.compile(r'^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$')) -slots.JgiMgInterface_dna_container_id = Slot(uri=NMDC_YAML['nmdc/dna_container_id'], name="JgiMgInterface_dna_container_id", curie=NMDC_YAML.curie('nmdc/dna_container_id'), +slots.JgiMgInterface_dna_container_id = Slot(uri=NMDC['nmdc/dna_container_id'], name="JgiMgInterface_dna_container_id", curie=NMDC.curie('nmdc/dna_container_id'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_container_id, domain=JgiMgInterface, range=str, pattern=re.compile(r'^.{1,20}$')) -slots.JgiMgInterface_dna_dnase = Slot(uri=NMDC_YAML['nmdc/dna_dnase'], name="JgiMgInterface_dna_dnase", curie=NMDC_YAML.curie('nmdc/dna_dnase'), +slots.JgiMgInterface_dna_dnase = Slot(uri=NMDC['nmdc/dna_dnase'], name="JgiMgInterface_dna_dnase", curie=NMDC.curie('nmdc/dna_dnase'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_dnase, domain=JgiMgInterface, range=Union[str, "YesNoEnum"]) -slots.JgiMgInterface_dna_isolate_meth = Slot(uri=NMDC_YAML['nmdc/dna_isolate_meth'], name="JgiMgInterface_dna_isolate_meth", curie=NMDC_YAML.curie('nmdc/dna_isolate_meth'), +slots.JgiMgInterface_dna_isolate_meth = Slot(uri=NMDC['nmdc/dna_isolate_meth'], name="JgiMgInterface_dna_isolate_meth", curie=NMDC.curie('nmdc/dna_isolate_meth'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_isolate_meth, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_project_contact = Slot(uri=NMDC_YAML['nmdc/dna_project_contact'], name="JgiMgInterface_dna_project_contact", curie=NMDC_YAML.curie('nmdc/dna_project_contact'), +slots.JgiMgInterface_dna_project_contact = Slot(uri=NMDC['nmdc/dna_project_contact'], name="JgiMgInterface_dna_project_contact", curie=NMDC.curie('nmdc/dna_project_contact'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_project_contact, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_samp_id = Slot(uri=NMDC_YAML['nmdc/dna_samp_id'], name="JgiMgInterface_dna_samp_id", curie=NMDC_YAML.curie('nmdc/dna_samp_id'), +slots.JgiMgInterface_dna_samp_id = Slot(uri=NMDC['nmdc/dna_samp_id'], name="JgiMgInterface_dna_samp_id", curie=NMDC.curie('nmdc/dna_samp_id'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_samp_id, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_sample_format = Slot(uri=NMDC_YAML['nmdc/dna_sample_format'], name="JgiMgInterface_dna_sample_format", curie=NMDC_YAML.curie('nmdc/dna_sample_format'), +slots.JgiMgInterface_dna_sample_format = Slot(uri=NMDC['nmdc/dna_sample_format'], name="JgiMgInterface_dna_sample_format", curie=NMDC.curie('nmdc/dna_sample_format'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_sample_format, domain=JgiMgInterface, range=Union[str, "DnaSampleFormatEnum"]) -slots.JgiMgInterface_dna_sample_name = Slot(uri=NMDC_YAML['nmdc/dna_sample_name'], name="JgiMgInterface_dna_sample_name", curie=NMDC_YAML.curie('nmdc/dna_sample_name'), +slots.JgiMgInterface_dna_sample_name = Slot(uri=NMDC['nmdc/dna_sample_name'], name="JgiMgInterface_dna_sample_name", curie=NMDC.curie('nmdc/dna_sample_name'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_sample_name, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_seq_project = Slot(uri=NMDC_YAML['nmdc/dna_seq_project'], name="JgiMgInterface_dna_seq_project", curie=NMDC_YAML.curie('nmdc/dna_seq_project'), +slots.JgiMgInterface_dna_seq_project = Slot(uri=NMDC['nmdc/dna_seq_project'], name="JgiMgInterface_dna_seq_project", curie=NMDC.curie('nmdc/dna_seq_project'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_seq_project, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_seq_project_name = Slot(uri=NMDC_YAML['nmdc/dna_seq_project_name'], name="JgiMgInterface_dna_seq_project_name", curie=NMDC_YAML.curie('nmdc/dna_seq_project_name'), +slots.JgiMgInterface_dna_seq_project_name = Slot(uri=NMDC['nmdc/dna_seq_project_name'], name="JgiMgInterface_dna_seq_project_name", curie=NMDC.curie('nmdc/dna_seq_project_name'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_seq_project_name, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_seq_project_pi = Slot(uri=NMDC_YAML['nmdc/dna_seq_project_pi'], name="JgiMgInterface_dna_seq_project_pi", curie=NMDC_YAML.curie('nmdc/dna_seq_project_pi'), +slots.JgiMgInterface_dna_seq_project_pi = Slot(uri=NMDC['nmdc/dna_seq_project_pi'], name="JgiMgInterface_dna_seq_project_pi", curie=NMDC.curie('nmdc/dna_seq_project_pi'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_seq_project_pi, domain=JgiMgInterface, range=str) -slots.JgiMgInterface_dna_volume = Slot(uri=NMDC_YAML['nmdc/dna_volume'], name="JgiMgInterface_dna_volume", curie=NMDC_YAML.curie('nmdc/dna_volume'), +slots.JgiMgInterface_dna_volume = Slot(uri=NMDC['nmdc/dna_volume'], name="JgiMgInterface_dna_volume", curie=NMDC.curie('nmdc/dna_volume'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_dna_volume, domain=JgiMgInterface, range=float) -slots.JgiMgInterface_proposal_dna = Slot(uri=NMDC_YAML['nmdc/proposal_dna'], name="JgiMgInterface_proposal_dna", curie=NMDC_YAML.curie('nmdc/proposal_dna'), +slots.JgiMgInterface_proposal_dna = Slot(uri=NMDC['nmdc/proposal_dna'], name="JgiMgInterface_proposal_dna", curie=NMDC.curie('nmdc/proposal_dna'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_proposal_dna, domain=JgiMgInterface, range=str) slots.JgiMgInterface_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="JgiMgInterface_oxy_stat_samp", curie=MIXS.curie('0000753'), model_uri=NMDC_SUB_SCHEMA.JgiMgInterface_oxy_stat_samp, domain=JgiMgInterface, range=Optional[Union[str, "OxyStatSampEnum"]]) -slots.JgiMtInterface_dnase_rna = Slot(uri=NMDC_YAML['nmdc/dnase_rna'], name="JgiMtInterface_dnase_rna", curie=NMDC_YAML.curie('nmdc/dnase_rna'), +slots.JgiMtInterface_dnase_rna = Slot(uri=NMDC['nmdc/dnase_rna'], name="JgiMtInterface_dnase_rna", curie=NMDC.curie('nmdc/dnase_rna'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_dnase_rna, domain=JgiMtInterface, range=Union[str, "YesNoEnum"]) -slots.JgiMtInterface_proposal_rna = Slot(uri=NMDC_YAML['nmdc/proposal_rna'], name="JgiMtInterface_proposal_rna", curie=NMDC_YAML.curie('nmdc/proposal_rna'), +slots.JgiMtInterface_proposal_rna = Slot(uri=NMDC['nmdc/proposal_rna'], name="JgiMtInterface_proposal_rna", curie=NMDC.curie('nmdc/proposal_rna'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_proposal_rna, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_absorb1 = Slot(uri=NMDC_YAML['nmdc/rna_absorb1'], name="JgiMtInterface_rna_absorb1", curie=NMDC_YAML.curie('nmdc/rna_absorb1'), +slots.JgiMtInterface_rna_absorb1 = Slot(uri=NMDC['nmdc/rna_absorb1'], name="JgiMtInterface_rna_absorb1", curie=NMDC.curie('nmdc/rna_absorb1'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_absorb1, domain=JgiMtInterface, range=Optional[float]) -slots.JgiMtInterface_rna_absorb2 = Slot(uri=NMDC_YAML['nmdc/rna_absorb2'], name="JgiMtInterface_rna_absorb2", curie=NMDC_YAML.curie('nmdc/rna_absorb2'), +slots.JgiMtInterface_rna_absorb2 = Slot(uri=NMDC['nmdc/rna_absorb2'], name="JgiMtInterface_rna_absorb2", curie=NMDC.curie('nmdc/rna_absorb2'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_absorb2, domain=JgiMtInterface, range=Optional[float]) -slots.JgiMtInterface_rna_concentration = Slot(uri=NMDC_YAML['nmdc/rna_concentration'], name="JgiMtInterface_rna_concentration", curie=NMDC_YAML.curie('nmdc/rna_concentration'), +slots.JgiMtInterface_rna_concentration = Slot(uri=NMDC['nmdc/rna_concentration'], name="JgiMtInterface_rna_concentration", curie=NMDC.curie('nmdc/rna_concentration'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_concentration, domain=JgiMtInterface, range=float) -slots.JgiMtInterface_rna_cont_type = Slot(uri=NMDC_YAML['nmdc/rna_cont_type'], name="JgiMtInterface_rna_cont_type", curie=NMDC_YAML.curie('nmdc/rna_cont_type'), +slots.JgiMtInterface_rna_cont_type = Slot(uri=NMDC['nmdc/rna_cont_type'], name="JgiMtInterface_rna_cont_type", curie=NMDC.curie('nmdc/rna_cont_type'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_cont_type, domain=JgiMtInterface, range=Union[str, "JgiContTypeEnum"]) -slots.JgiMtInterface_rna_cont_well = Slot(uri=NMDC_YAML['nmdc/rna_cont_well'], name="JgiMtInterface_rna_cont_well", curie=NMDC_YAML.curie('nmdc/rna_cont_well'), +slots.JgiMtInterface_rna_cont_well = Slot(uri=NMDC['nmdc/rna_cont_well'], name="JgiMtInterface_rna_cont_well", curie=NMDC.curie('nmdc/rna_cont_well'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_cont_well, domain=JgiMtInterface, range=Optional[str], pattern=re.compile(r'^(?!A1|A12|H1|H12)(([A-H][1-9])|([A-H]1[0-2]))$')) -slots.JgiMtInterface_rna_container_id = Slot(uri=NMDC_YAML['nmdc/rna_container_id'], name="JgiMtInterface_rna_container_id", curie=NMDC_YAML.curie('nmdc/rna_container_id'), +slots.JgiMtInterface_rna_container_id = Slot(uri=NMDC['nmdc/rna_container_id'], name="JgiMtInterface_rna_container_id", curie=NMDC.curie('nmdc/rna_container_id'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_container_id, domain=JgiMtInterface, range=str, pattern=re.compile(r'^.{1,20}$')) -slots.JgiMtInterface_rna_isolate_meth = Slot(uri=NMDC_YAML['nmdc/rna_isolate_meth'], name="JgiMtInterface_rna_isolate_meth", curie=NMDC_YAML.curie('nmdc/rna_isolate_meth'), +slots.JgiMtInterface_rna_isolate_meth = Slot(uri=NMDC['nmdc/rna_isolate_meth'], name="JgiMtInterface_rna_isolate_meth", curie=NMDC.curie('nmdc/rna_isolate_meth'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_isolate_meth, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_project_contact = Slot(uri=NMDC_YAML['nmdc/rna_project_contact'], name="JgiMtInterface_rna_project_contact", curie=NMDC_YAML.curie('nmdc/rna_project_contact'), +slots.JgiMtInterface_rna_project_contact = Slot(uri=NMDC['nmdc/rna_project_contact'], name="JgiMtInterface_rna_project_contact", curie=NMDC.curie('nmdc/rna_project_contact'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_project_contact, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_samp_id = Slot(uri=NMDC_YAML['nmdc/rna_samp_id'], name="JgiMtInterface_rna_samp_id", curie=NMDC_YAML.curie('nmdc/rna_samp_id'), +slots.JgiMtInterface_rna_samp_id = Slot(uri=NMDC['nmdc/rna_samp_id'], name="JgiMtInterface_rna_samp_id", curie=NMDC.curie('nmdc/rna_samp_id'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_samp_id, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_sample_format = Slot(uri=NMDC_YAML['nmdc/rna_sample_format'], name="JgiMtInterface_rna_sample_format", curie=NMDC_YAML.curie('nmdc/rna_sample_format'), +slots.JgiMtInterface_rna_sample_format = Slot(uri=NMDC['nmdc/rna_sample_format'], name="JgiMtInterface_rna_sample_format", curie=NMDC.curie('nmdc/rna_sample_format'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_sample_format, domain=JgiMtInterface, range=Union[str, "RnaSampleFormatEnum"]) -slots.JgiMtInterface_rna_sample_name = Slot(uri=NMDC_YAML['nmdc/rna_sample_name'], name="JgiMtInterface_rna_sample_name", curie=NMDC_YAML.curie('nmdc/rna_sample_name'), +slots.JgiMtInterface_rna_sample_name = Slot(uri=NMDC['nmdc/rna_sample_name'], name="JgiMtInterface_rna_sample_name", curie=NMDC.curie('nmdc/rna_sample_name'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_sample_name, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_seq_project = Slot(uri=NMDC_YAML['nmdc/rna_seq_project'], name="JgiMtInterface_rna_seq_project", curie=NMDC_YAML.curie('nmdc/rna_seq_project'), +slots.JgiMtInterface_rna_seq_project = Slot(uri=NMDC['nmdc/rna_seq_project'], name="JgiMtInterface_rna_seq_project", curie=NMDC.curie('nmdc/rna_seq_project'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_seq_project, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_seq_project_name = Slot(uri=NMDC_YAML['nmdc/rna_seq_project_name'], name="JgiMtInterface_rna_seq_project_name", curie=NMDC_YAML.curie('nmdc/rna_seq_project_name'), +slots.JgiMtInterface_rna_seq_project_name = Slot(uri=NMDC['nmdc/rna_seq_project_name'], name="JgiMtInterface_rna_seq_project_name", curie=NMDC.curie('nmdc/rna_seq_project_name'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_seq_project_name, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_seq_project_pi = Slot(uri=NMDC_YAML['nmdc/rna_seq_project_pi'], name="JgiMtInterface_rna_seq_project_pi", curie=NMDC_YAML.curie('nmdc/rna_seq_project_pi'), +slots.JgiMtInterface_rna_seq_project_pi = Slot(uri=NMDC['nmdc/rna_seq_project_pi'], name="JgiMtInterface_rna_seq_project_pi", curie=NMDC.curie('nmdc/rna_seq_project_pi'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_seq_project_pi, domain=JgiMtInterface, range=str) -slots.JgiMtInterface_rna_volume = Slot(uri=NMDC_YAML['nmdc/rna_volume'], name="JgiMtInterface_rna_volume", curie=NMDC_YAML.curie('nmdc/rna_volume'), +slots.JgiMtInterface_rna_volume = Slot(uri=NMDC['nmdc/rna_volume'], name="JgiMtInterface_rna_volume", curie=NMDC.curie('nmdc/rna_volume'), model_uri=NMDC_SUB_SCHEMA.JgiMtInterface_rna_volume, domain=JgiMtInterface, range=float) slots.JgiMtInterface_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="JgiMtInterface_oxy_stat_samp", curie=MIXS.curie('0000753'), @@ -16465,16 +16837,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_diss_oxygen, domain=MiscEnvsInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.MiscEnvsInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="MiscEnvsInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.MiscEnvsInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="MiscEnvsInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_ecosystem, domain=MiscEnvsInterface, range=Optional[str]) -slots.MiscEnvsInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="MiscEnvsInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.MiscEnvsInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="MiscEnvsInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_ecosystem_category, domain=MiscEnvsInterface, range=Optional[str]) -slots.MiscEnvsInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="MiscEnvsInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.MiscEnvsInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="MiscEnvsInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_ecosystem_subtype, domain=MiscEnvsInterface, range=Optional[str]) -slots.MiscEnvsInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="MiscEnvsInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.MiscEnvsInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="MiscEnvsInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_ecosystem_type, domain=MiscEnvsInterface, range=Optional[str]) slots.MiscEnvsInterface_elev = Slot(uri=MIXS['0000093'], name="MiscEnvsInterface_elev", curie=MIXS.curie('0000093'), @@ -16492,7 +16864,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_env_medium, domain=MiscEnvsInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.MiscEnvsInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="MiscEnvsInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.MiscEnvsInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="MiscEnvsInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_env_package, domain=MiscEnvsInterface, range=str) slots.MiscEnvsInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="MiscEnvsInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -16596,7 +16968,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_samp_store_temp, domain=MiscEnvsInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.MiscEnvsInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="MiscEnvsInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.MiscEnvsInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="MiscEnvsInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_sample_link, domain=MiscEnvsInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -16611,7 +16983,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_sodium, domain=MiscEnvsInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.MiscEnvsInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="MiscEnvsInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.MiscEnvsInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="MiscEnvsInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.MiscEnvsInterface_specific_ecosystem, domain=MiscEnvsInterface, range=Optional[str]) slots.MiscEnvsInterface_sulfate = Slot(uri=MIXS['0000423'], name="MiscEnvsInterface_sulfate", curie=MIXS.curie('0000423'), @@ -16666,16 +17038,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_depth, domain=PlantAssociatedInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?(\s*-\s*[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?)?$')) -slots.PlantAssociatedInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="PlantAssociatedInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.PlantAssociatedInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="PlantAssociatedInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_ecosystem, domain=PlantAssociatedInterface, range=Optional[str]) -slots.PlantAssociatedInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="PlantAssociatedInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.PlantAssociatedInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="PlantAssociatedInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_ecosystem_category, domain=PlantAssociatedInterface, range=Optional[str]) -slots.PlantAssociatedInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="PlantAssociatedInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.PlantAssociatedInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="PlantAssociatedInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_ecosystem_subtype, domain=PlantAssociatedInterface, range=Optional[str]) -slots.PlantAssociatedInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="PlantAssociatedInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.PlantAssociatedInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="PlantAssociatedInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_ecosystem_type, domain=PlantAssociatedInterface, range=Optional[str]) slots.PlantAssociatedInterface_elev = Slot(uri=MIXS['0000093'], name="PlantAssociatedInterface_elev", curie=MIXS.curie('0000093'), @@ -16693,7 +17065,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_env_medium, domain=PlantAssociatedInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.PlantAssociatedInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="PlantAssociatedInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.PlantAssociatedInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="PlantAssociatedInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_env_package, domain=PlantAssociatedInterface, range=str) slots.PlantAssociatedInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="PlantAssociatedInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -16904,7 +17276,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_samp_store_temp, domain=PlantAssociatedInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.PlantAssociatedInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="PlantAssociatedInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.PlantAssociatedInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="PlantAssociatedInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_sample_link, domain=PlantAssociatedInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -16914,7 +17286,7 @@ class slots: slots.PlantAssociatedInterface_size_frac = Slot(uri=MIXS['0000017'], name="PlantAssociatedInterface_size_frac", curie=MIXS.curie('0000017'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_size_frac, domain=PlantAssociatedInterface, range=Optional[str]) -slots.PlantAssociatedInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="PlantAssociatedInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.PlantAssociatedInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="PlantAssociatedInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.PlantAssociatedInterface_specific_ecosystem, domain=PlantAssociatedInterface, range=Optional[str]) slots.PlantAssociatedInterface_standing_water_regm = Slot(uri=MIXS['0001069'], name="PlantAssociatedInterface_standing_water_regm", curie=MIXS.curie('0001069'), @@ -17025,16 +17397,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SedimentInterface_diss_oxygen, domain=SedimentInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SedimentInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="SedimentInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.SedimentInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="SedimentInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_ecosystem, domain=SedimentInterface, range=Optional[str]) -slots.SedimentInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="SedimentInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.SedimentInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="SedimentInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_ecosystem_category, domain=SedimentInterface, range=Optional[str]) -slots.SedimentInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="SedimentInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.SedimentInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="SedimentInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_ecosystem_subtype, domain=SedimentInterface, range=Optional[str]) -slots.SedimentInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="SedimentInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.SedimentInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="SedimentInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_ecosystem_type, domain=SedimentInterface, range=Optional[str]) slots.SedimentInterface_elev = Slot(uri=MIXS['0000093'], name="SedimentInterface_elev", curie=MIXS.curie('0000093'), @@ -17052,7 +17424,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SedimentInterface_env_medium, domain=SedimentInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.SedimentInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="SedimentInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.SedimentInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="SedimentInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_env_package, domain=SedimentInterface, range=str) slots.SedimentInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="SedimentInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -17203,7 +17575,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SedimentInterface_samp_store_temp, domain=SedimentInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SedimentInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="SedimentInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.SedimentInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="SedimentInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_sample_link, domain=SedimentInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -17221,7 +17593,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SedimentInterface_sodium, domain=SedimentInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SedimentInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="SedimentInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.SedimentInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="SedimentInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.SedimentInterface_specific_ecosystem, domain=SedimentInterface, range=Optional[str]) slots.SedimentInterface_sulfate = Slot(uri=MIXS['0000423'], name="SedimentInterface_sulfate", curie=MIXS.curie('0000423'), @@ -17277,7 +17649,7 @@ class slots: slots.SoilInterface_al_sat_meth = Slot(uri=MIXS['0000324'], name="SoilInterface_al_sat_meth", curie=MIXS.curie('0000324'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_al_sat_meth, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_ammonium_nitrogen = Slot(uri=NMDC_YAML['nmdc/ammonium_nitrogen'], name="SoilInterface_ammonium_nitrogen", curie=NMDC_YAML.curie('nmdc/ammonium_nitrogen'), +slots.SoilInterface_ammonium_nitrogen = Slot(uri=NMDC['nmdc/ammonium_nitrogen'], name="SoilInterface_ammonium_nitrogen", curie=NMDC.curie('nmdc/ammonium_nitrogen'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_ammonium_nitrogen, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) @@ -17310,15 +17682,15 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_collection_date, domain=SoilInterface, range=str, pattern=re.compile(r'^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$')) -slots.SoilInterface_collection_date_inc = Slot(uri=NMDC_YAML['nmdc/collection_date_inc'], name="SoilInterface_collection_date_inc", curie=NMDC_YAML.curie('nmdc/collection_date_inc'), +slots.SoilInterface_collection_date_inc = Slot(uri=NMDC['nmdc/collection_date_inc'], name="SoilInterface_collection_date_inc", curie=NMDC.curie('nmdc/collection_date_inc'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_collection_date_inc, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$')) -slots.SoilInterface_collection_time = Slot(uri=NMDC_YAML['nmdc/collection_time'], name="SoilInterface_collection_time", curie=NMDC_YAML.curie('nmdc/collection_time'), +slots.SoilInterface_collection_time = Slot(uri=NMDC['nmdc/collection_time'], name="SoilInterface_collection_time", curie=NMDC.curie('nmdc/collection_time'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_collection_time, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) -slots.SoilInterface_collection_time_inc = Slot(uri=NMDC_YAML['nmdc/collection_time_inc'], name="SoilInterface_collection_time_inc", curie=NMDC_YAML.curie('nmdc/collection_time_inc'), +slots.SoilInterface_collection_time_inc = Slot(uri=NMDC['nmdc/collection_time_inc'], name="SoilInterface_collection_time_inc", curie=NMDC.curie('nmdc/collection_time_inc'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_collection_time_inc, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) @@ -17341,16 +17713,16 @@ class slots: slots.SoilInterface_drainage_class = Slot(uri=MIXS['0001085'], name="SoilInterface_drainage_class", curie=MIXS.curie('0001085'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_drainage_class, domain=SoilInterface, range=Optional[Union[str, "DrainageClassEnum"]]) -slots.SoilInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="SoilInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.SoilInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="SoilInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_ecosystem, domain=SoilInterface, range=Optional[Union[str, "EcosystemEnum"]]) -slots.SoilInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="SoilInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.SoilInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="SoilInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_ecosystem_category, domain=SoilInterface, range=Optional[Union[str, "EcosystemCategoryEnum"]]) -slots.SoilInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="SoilInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.SoilInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="SoilInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_ecosystem_subtype, domain=SoilInterface, range=Optional[Union[str, "EcosystemSubtypeEnum"]]) -slots.SoilInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="SoilInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.SoilInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="SoilInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_ecosystem_type, domain=SoilInterface, range=Optional[Union[str, "EcosystemTypeEnum"]]) slots.SoilInterface_elev = Slot(uri=MIXS['0000093'], name="SoilInterface_elev", curie=MIXS.curie('0000093'), @@ -17368,13 +17740,13 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_env_medium, domain=SoilInterface, range=Union[str, "EnvMediumSoilEnum"], pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.SoilInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="SoilInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.SoilInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="SoilInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_env_package, domain=SoilInterface, range=str) slots.SoilInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="SoilInterface_experimental_factor", curie=MIXS.curie('0000008'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_experimental_factor, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_experimental_factor_other = Slot(uri=NMDC_YAML['nmdc/experimental_factor_other'], name="SoilInterface_experimental_factor_other", curie=NMDC_YAML.curie('nmdc/experimental_factor_other'), +slots.SoilInterface_experimental_factor_other = Slot(uri=NMDC['nmdc/experimental_factor_other'], name="SoilInterface_experimental_factor_other", curie=NMDC.curie('nmdc/experimental_factor_other'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_experimental_factor_other, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_extreme_event = Slot(uri=MIXS['0000320'], name="SoilInterface_extreme_event", curie=MIXS.curie('0000320'), @@ -17383,7 +17755,7 @@ class slots: slots.SoilInterface_fao_class = Slot(uri=MIXS['0001083'], name="SoilInterface_fao_class", curie=MIXS.curie('0001083'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_fao_class, domain=SoilInterface, range=Optional[Union[str, "FaoClassEnum"]]) -slots.SoilInterface_filter_method = Slot(uri=NMDC_YAML['nmdc/filter_method'], name="SoilInterface_filter_method", curie=NMDC_YAML.curie('nmdc/filter_method'), +slots.SoilInterface_filter_method = Slot(uri=NMDC['nmdc/filter_method'], name="SoilInterface_filter_method", curie=NMDC.curie('nmdc/filter_method'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_filter_method, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_fire = Slot(uri=MIXS['0001086'], name="SoilInterface_fire", curie=MIXS.curie('0001086'), @@ -17416,7 +17788,7 @@ class slots: slots.SoilInterface_humidity_regm = Slot(uri=MIXS['0000568'], name="SoilInterface_humidity_regm", curie=MIXS.curie('0000568'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_humidity_regm, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_isotope_exposure = Slot(uri=NMDC_YAML['nmdc/isotope_exposure'], name="SoilInterface_isotope_exposure", curie=NMDC_YAML.curie('nmdc/isotope_exposure'), +slots.SoilInterface_isotope_exposure = Slot(uri=NMDC['nmdc/isotope_exposure'], name="SoilInterface_isotope_exposure", curie=NMDC.curie('nmdc/isotope_exposure'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_isotope_exposure, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]; ([\+-]?\d{4}(?!\d{2}\b))((-?)((0[1-9]|1[0-2])(\3([12]\d|0[1-9]|3[01]))?|W([0-4]\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\d|[12]\d{2}|3([0-5]\d|6[1-6])))([T\s]((([01]\d|2[0-3])((:?)[0-5]\d)?|24\:?00)([\.,]\d+(?!:))?)?(\17[0-5]\d([\.,]\d+)?)?([zZ]|([\+-])([01]\d|2[0-3]):?([0-5]\d)?)?)?)?$')) @@ -17424,11 +17796,11 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_lat_lon, domain=SoilInterface, range=str, pattern=re.compile(r'^[-+]?([1-8]?\d(\.\d+)?|90(\.0+)?)\s[-+]?(180(\.0+)?|((1[0-7]\d)|([1-9]?\d))(\.\d+)?)$')) -slots.SoilInterface_lbc_thirty = Slot(uri=NMDC_YAML['nmdc/lbc_thirty'], name="SoilInterface_lbc_thirty", curie=NMDC_YAML.curie('nmdc/lbc_thirty'), +slots.SoilInterface_lbc_thirty = Slot(uri=NMDC['nmdc/lbc_thirty'], name="SoilInterface_lbc_thirty", curie=NMDC.curie('nmdc/lbc_thirty'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_lbc_thirty, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_lbceq = Slot(uri=NMDC_YAML['nmdc/lbceq'], name="SoilInterface_lbceq", curie=NMDC_YAML.curie('nmdc/lbceq'), +slots.SoilInterface_lbceq = Slot(uri=NMDC['nmdc/lbceq'], name="SoilInterface_lbceq", curie=NMDC.curie('nmdc/lbceq'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_lbceq, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) @@ -17448,28 +17820,28 @@ class slots: slots.SoilInterface_local_class_meth = Slot(uri=MIXS['0000331'], name="SoilInterface_local_class_meth", curie=MIXS.curie('0000331'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_local_class_meth, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_manganese = Slot(uri=NMDC_YAML['nmdc/manganese'], name="SoilInterface_manganese", curie=NMDC_YAML.curie('nmdc/manganese'), +slots.SoilInterface_manganese = Slot(uri=NMDC['nmdc/manganese'], name="SoilInterface_manganese", curie=NMDC.curie('nmdc/manganese'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_manganese, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_micro_biomass_c_meth = Slot(uri=NMDC_YAML['nmdc/micro_biomass_c_meth'], name="SoilInterface_micro_biomass_c_meth", curie=NMDC_YAML.curie('nmdc/micro_biomass_c_meth'), +slots.SoilInterface_micro_biomass_c_meth = Slot(uri=NMDC['nmdc/micro_biomass_c_meth'], name="SoilInterface_micro_biomass_c_meth", curie=NMDC.curie('nmdc/micro_biomass_c_meth'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_micro_biomass_c_meth, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_micro_biomass_meth = Slot(uri=MIXS['0000339'], name="SoilInterface_micro_biomass_meth", curie=MIXS.curie('0000339'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_micro_biomass_meth, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_micro_biomass_n_meth = Slot(uri=NMDC_YAML['nmdc/micro_biomass_n_meth'], name="SoilInterface_micro_biomass_n_meth", curie=NMDC_YAML.curie('nmdc/micro_biomass_n_meth'), +slots.SoilInterface_micro_biomass_n_meth = Slot(uri=NMDC['nmdc/micro_biomass_n_meth'], name="SoilInterface_micro_biomass_n_meth", curie=NMDC.curie('nmdc/micro_biomass_n_meth'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_micro_biomass_n_meth, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_microbial_biomass = Slot(uri=MIXS['0000650'], name="SoilInterface_microbial_biomass", curie=MIXS.curie('0000650'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_microbial_biomass, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_microbial_biomass_c = Slot(uri=NMDC_YAML['nmdc/microbial_biomass_c'], name="SoilInterface_microbial_biomass_c", curie=NMDC_YAML.curie('nmdc/microbial_biomass_c'), +slots.SoilInterface_microbial_biomass_c = Slot(uri=NMDC['nmdc/microbial_biomass_c'], name="SoilInterface_microbial_biomass_c", curie=NMDC.curie('nmdc/microbial_biomass_c'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_microbial_biomass_c, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? \S+$')) -slots.SoilInterface_microbial_biomass_n = Slot(uri=NMDC_YAML['nmdc/microbial_biomass_n'], name="SoilInterface_microbial_biomass_n", curie=NMDC_YAML.curie('nmdc/microbial_biomass_n'), +slots.SoilInterface_microbial_biomass_n = Slot(uri=NMDC['nmdc/microbial_biomass_n'], name="SoilInterface_microbial_biomass_n", curie=NMDC.curie('nmdc/microbial_biomass_n'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_microbial_biomass_n, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? \S+$')) @@ -17477,19 +17849,19 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_misc_param, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^([^;\t\r\x0A]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A]+\|)*([^;\t\r\x0A]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A]+)$')) -slots.SoilInterface_nitrate_nitrogen = Slot(uri=NMDC_YAML['nmdc/nitrate_nitrogen'], name="SoilInterface_nitrate_nitrogen", curie=NMDC_YAML.curie('nmdc/nitrate_nitrogen'), +slots.SoilInterface_nitrate_nitrogen = Slot(uri=NMDC['nmdc/nitrate_nitrogen'], name="SoilInterface_nitrate_nitrogen", curie=NMDC.curie('nmdc/nitrate_nitrogen'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_nitrate_nitrogen, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_nitrite_nitrogen = Slot(uri=NMDC_YAML['nmdc/nitrite_nitrogen'], name="SoilInterface_nitrite_nitrogen", curie=NMDC_YAML.curie('nmdc/nitrite_nitrogen'), +slots.SoilInterface_nitrite_nitrogen = Slot(uri=NMDC['nmdc/nitrite_nitrogen'], name="SoilInterface_nitrite_nitrogen", curie=NMDC.curie('nmdc/nitrite_nitrogen'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_nitrite_nitrogen, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_non_microb_biomass = Slot(uri=NMDC_YAML['nmdc/non_microb_biomass'], name="SoilInterface_non_microb_biomass", curie=NMDC_YAML.curie('nmdc/non_microb_biomass'), +slots.SoilInterface_non_microb_biomass = Slot(uri=NMDC['nmdc/non_microb_biomass'], name="SoilInterface_non_microb_biomass", curie=NMDC.curie('nmdc/non_microb_biomass'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_non_microb_biomass, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[^;\t\r\x0A\|]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A\|]+$')) -slots.SoilInterface_non_microb_biomass_method = Slot(uri=NMDC_YAML['nmdc/non_microb_biomass_method'], name="SoilInterface_non_microb_biomass_method", curie=NMDC_YAML.curie('nmdc/non_microb_biomass_method'), +slots.SoilInterface_non_microb_biomass_method = Slot(uri=NMDC['nmdc/non_microb_biomass_method'], name="SoilInterface_non_microb_biomass_method", curie=NMDC.curie('nmdc/non_microb_biomass_method'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_non_microb_biomass_method, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_org_matter = Slot(uri=MIXS['0000204'], name="SoilInterface_org_matter", curie=MIXS.curie('0000204'), @@ -17500,10 +17872,10 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_org_nitro, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_org_nitro_method = Slot(uri=NMDC_YAML['nmdc/org_nitro_method'], name="SoilInterface_org_nitro_method", curie=NMDC_YAML.curie('nmdc/org_nitro_method'), +slots.SoilInterface_org_nitro_method = Slot(uri=NMDC['nmdc/org_nitro_method'], name="SoilInterface_org_nitro_method", curie=NMDC.curie('nmdc/org_nitro_method'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_org_nitro_method, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_other_treatment = Slot(uri=NMDC_YAML['nmdc/other_treatment'], name="SoilInterface_other_treatment", curie=NMDC_YAML.curie('nmdc/other_treatment'), +slots.SoilInterface_other_treatment = Slot(uri=NMDC['nmdc/other_treatment'], name="SoilInterface_other_treatment", curie=NMDC.curie('nmdc/other_treatment'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_other_treatment, domain=SoilInterface, range=Optional[str]) slots.SoilInterface_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="SoilInterface_oxy_stat_samp", curie=MIXS.curie('0000753'), @@ -17553,7 +17925,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.SoilInterface_samp_store_temp, domain=SoilInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.SoilInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="SoilInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.SoilInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="SoilInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_sample_link, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -17601,14 +17973,14 @@ class slots: slots.SoilInterface_soil_type_meth = Slot(uri=MIXS['0000334'], name="SoilInterface_soil_type_meth", curie=MIXS.curie('0000334'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_soil_type_meth, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="SoilInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.SoilInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="SoilInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_specific_ecosystem, domain=SoilInterface, range=Optional[Union[str, "SpecificEcosystemEnum"]]) -slots.SoilInterface_start_date_inc = Slot(uri=NMDC_YAML['nmdc/start_date_inc'], name="SoilInterface_start_date_inc", curie=NMDC_YAML.curie('nmdc/start_date_inc'), +slots.SoilInterface_start_date_inc = Slot(uri=NMDC['nmdc/start_date_inc'], name="SoilInterface_start_date_inc", curie=NMDC.curie('nmdc/start_date_inc'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_start_date_inc, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$')) -slots.SoilInterface_start_time_inc = Slot(uri=NMDC_YAML['nmdc/start_time_inc'], name="SoilInterface_start_time_inc", curie=NMDC_YAML.curie('nmdc/start_time_inc'), +slots.SoilInterface_start_time_inc = Slot(uri=NMDC['nmdc/start_time_inc'], name="SoilInterface_start_time_inc", curie=NMDC.curie('nmdc/start_time_inc'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_start_time_inc, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) @@ -17654,7 +18026,7 @@ class slots: slots.SoilInterface_watering_regm = Slot(uri=MIXS['0000591'], name="SoilInterface_watering_regm", curie=MIXS.curie('0000591'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_watering_regm, domain=SoilInterface, range=Optional[str]) -slots.SoilInterface_zinc = Slot(uri=NMDC_YAML['nmdc/zinc'], name="SoilInterface_zinc", curie=NMDC_YAML.curie('nmdc/zinc'), +slots.SoilInterface_zinc = Slot(uri=NMDC['nmdc/zinc'], name="SoilInterface_zinc", curie=NMDC.curie('nmdc/zinc'), model_uri=NMDC_SUB_SCHEMA.SoilInterface_zinc, domain=SoilInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) @@ -17686,16 +18058,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_depth, domain=WastewaterSludgeInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?(\s*-\s*[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?)?$')) -slots.WastewaterSludgeInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="WastewaterSludgeInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.WastewaterSludgeInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="WastewaterSludgeInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_ecosystem, domain=WastewaterSludgeInterface, range=Optional[str]) -slots.WastewaterSludgeInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="WastewaterSludgeInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.WastewaterSludgeInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="WastewaterSludgeInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_ecosystem_category, domain=WastewaterSludgeInterface, range=Optional[str]) -slots.WastewaterSludgeInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="WastewaterSludgeInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.WastewaterSludgeInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="WastewaterSludgeInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_ecosystem_subtype, domain=WastewaterSludgeInterface, range=Optional[str]) -slots.WastewaterSludgeInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="WastewaterSludgeInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.WastewaterSludgeInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="WastewaterSludgeInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_ecosystem_type, domain=WastewaterSludgeInterface, range=Optional[str]) slots.WastewaterSludgeInterface_efficiency_percent = Slot(uri=MIXS['0000657'], name="WastewaterSludgeInterface_efficiency_percent", curie=MIXS.curie('0000657'), @@ -17721,7 +18093,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_env_medium, domain=WastewaterSludgeInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.WastewaterSludgeInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="WastewaterSludgeInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.WastewaterSludgeInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="WastewaterSludgeInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_env_package, domain=WastewaterSludgeInterface, range=str) slots.WastewaterSludgeInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="WastewaterSludgeInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -17818,7 +18190,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_samp_store_temp, domain=WastewaterSludgeInterface, range=str, pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.WastewaterSludgeInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="WastewaterSludgeInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.WastewaterSludgeInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="WastewaterSludgeInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_sample_link, domain=WastewaterSludgeInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -17847,7 +18219,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_soluble_org_mat, domain=WastewaterSludgeInterface, range=Optional[str], pattern=re.compile(r'^([^;\t\r\x0A]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A]+\|)*([^;\t\r\x0A]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A]+)$')) -slots.WastewaterSludgeInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="WastewaterSludgeInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.WastewaterSludgeInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="WastewaterSludgeInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.WastewaterSludgeInterface_specific_ecosystem, domain=WastewaterSludgeInterface, range=Optional[str]) slots.WastewaterSludgeInterface_suspend_solids = Slot(uri=MIXS['0000150'], name="WastewaterSludgeInterface_suspend_solids", curie=MIXS.curie('0000150'), @@ -17995,16 +18367,16 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WaterInterface_down_par, domain=WaterInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.WaterInterface_ecosystem = Slot(uri=NMDC_YAML['nmdc/ecosystem'], name="WaterInterface_ecosystem", curie=NMDC_YAML.curie('nmdc/ecosystem'), +slots.WaterInterface_ecosystem = Slot(uri=NMDC['nmdc/ecosystem'], name="WaterInterface_ecosystem", curie=NMDC.curie('nmdc/ecosystem'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_ecosystem, domain=WaterInterface, range=Optional[str]) -slots.WaterInterface_ecosystem_category = Slot(uri=NMDC_YAML['nmdc/ecosystem_category'], name="WaterInterface_ecosystem_category", curie=NMDC_YAML.curie('nmdc/ecosystem_category'), +slots.WaterInterface_ecosystem_category = Slot(uri=NMDC['nmdc/ecosystem_category'], name="WaterInterface_ecosystem_category", curie=NMDC.curie('nmdc/ecosystem_category'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_ecosystem_category, domain=WaterInterface, range=Optional[str]) -slots.WaterInterface_ecosystem_subtype = Slot(uri=NMDC_YAML['nmdc/ecosystem_subtype'], name="WaterInterface_ecosystem_subtype", curie=NMDC_YAML.curie('nmdc/ecosystem_subtype'), +slots.WaterInterface_ecosystem_subtype = Slot(uri=NMDC['nmdc/ecosystem_subtype'], name="WaterInterface_ecosystem_subtype", curie=NMDC.curie('nmdc/ecosystem_subtype'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_ecosystem_subtype, domain=WaterInterface, range=Optional[str]) -slots.WaterInterface_ecosystem_type = Slot(uri=NMDC_YAML['nmdc/ecosystem_type'], name="WaterInterface_ecosystem_type", curie=NMDC_YAML.curie('nmdc/ecosystem_type'), +slots.WaterInterface_ecosystem_type = Slot(uri=NMDC['nmdc/ecosystem_type'], name="WaterInterface_ecosystem_type", curie=NMDC.curie('nmdc/ecosystem_type'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_ecosystem_type, domain=WaterInterface, range=Optional[str]) slots.WaterInterface_elev = Slot(uri=MIXS['0000093'], name="WaterInterface_elev", curie=MIXS.curie('0000093'), @@ -18022,7 +18394,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WaterInterface_env_medium, domain=WaterInterface, range=str, pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$')) -slots.WaterInterface_env_package = Slot(uri=NMDC_YAML['nmdc/env_package'], name="WaterInterface_env_package", curie=NMDC_YAML.curie('nmdc/env_package'), +slots.WaterInterface_env_package = Slot(uri=NMDC['nmdc/env_package'], name="WaterInterface_env_package", curie=NMDC.curie('nmdc/env_package'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_env_package, domain=WaterInterface, range=str) slots.WaterInterface_experimental_factor = Slot(uri=MIXS['0000008'], name="WaterInterface_experimental_factor", curie=MIXS.curie('0000008'), @@ -18177,7 +18549,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WaterInterface_samp_store_temp, domain=WaterInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.WaterInterface_sample_link = Slot(uri=NMDC_YAML['nmdc/sample_link'], name="WaterInterface_sample_link", curie=NMDC_YAML.curie('nmdc/sample_link'), +slots.WaterInterface_sample_link = Slot(uri=NMDC['nmdc/sample_link'], name="WaterInterface_sample_link", curie=NMDC.curie('nmdc/sample_link'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_sample_link, domain=WaterInterface, range=Optional[str], pattern=re.compile(r'[^\:\n\r]+\:[^\:\n\r]+')) @@ -18204,7 +18576,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WaterInterface_soluble_react_phosp, domain=WaterInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.WaterInterface_specific_ecosystem = Slot(uri=NMDC_YAML['nmdc/specific_ecosystem'], name="WaterInterface_specific_ecosystem", curie=NMDC_YAML.curie('nmdc/specific_ecosystem'), +slots.WaterInterface_specific_ecosystem = Slot(uri=NMDC['nmdc/specific_ecosystem'], name="WaterInterface_specific_ecosystem", curie=NMDC.curie('nmdc/specific_ecosystem'), model_uri=NMDC_SUB_SCHEMA.WaterInterface_specific_ecosystem, domain=WaterInterface, range=Optional[str]) slots.WaterInterface_sulfate = Slot(uri=MIXS['0000423'], name="WaterInterface_sulfate", curie=MIXS.curie('0000423'), @@ -18254,7 +18626,7 @@ class slots: model_uri=NMDC_SUB_SCHEMA.WaterInterface_water_current, domain=WaterInterface, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+ +\S.*$')) -slots.DhMultiviewCommonColumnsMixin_analysis_type = Slot(uri=NMDC_YAML['nmdc/analysis_type'], name="DhMultiviewCommonColumnsMixin_analysis_type", curie=NMDC_YAML.curie('nmdc/analysis_type'), +slots.DhMultiviewCommonColumnsMixin_analysis_type = Slot(uri=NMDC['nmdc/analysis_type'], name="DhMultiviewCommonColumnsMixin_analysis_type", curie=NMDC.curie('nmdc/analysis_type'), model_uri=NMDC_SUB_SCHEMA.DhMultiviewCommonColumnsMixin_analysis_type, domain=None, range=Union[Union[str, "AnalysisTypeEnum"], List[Union[str, "AnalysisTypeEnum"]]]) slots.DhMultiviewCommonColumnsMixin_samp_name = Slot(uri=MIXS['0001107'], name="DhMultiviewCommonColumnsMixin_samp_name", curie=MIXS.curie('0001107'), @@ -18267,59 +18639,59 @@ class slots: slots.DhMultiviewCommonColumnsMixin_oxy_stat_samp = Slot(uri=MIXS['0000753'], name="DhMultiviewCommonColumnsMixin_oxy_stat_samp", curie=MIXS.curie('0000753'), model_uri=NMDC_SUB_SCHEMA.DhMultiviewCommonColumnsMixin_oxy_stat_samp, domain=None, range=Optional[Union[str, "OxyStatSampEnum"]]) -slots.SoilMixsInspiredMixin_collection_date_inc = Slot(uri=NMDC_YAML['nmdc/collection_date_inc'], name="SoilMixsInspiredMixin_collection_date_inc", curie=NMDC_YAML.curie('nmdc/collection_date_inc'), +slots.SoilMixsInspiredMixin_collection_date_inc = Slot(uri=NMDC['nmdc/collection_date_inc'], name="SoilMixsInspiredMixin_collection_date_inc", curie=NMDC.curie('nmdc/collection_date_inc'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_collection_date_inc, domain=None, range=Optional[str], pattern=re.compile(r'^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$')) -slots.SoilMixsInspiredMixin_collection_time = Slot(uri=NMDC_YAML['nmdc/collection_time'], name="SoilMixsInspiredMixin_collection_time", curie=NMDC_YAML.curie('nmdc/collection_time'), +slots.SoilMixsInspiredMixin_collection_time = Slot(uri=NMDC['nmdc/collection_time'], name="SoilMixsInspiredMixin_collection_time", curie=NMDC.curie('nmdc/collection_time'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_collection_time, domain=None, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) -slots.SoilMixsInspiredMixin_collection_time_inc = Slot(uri=NMDC_YAML['nmdc/collection_time_inc'], name="SoilMixsInspiredMixin_collection_time_inc", curie=NMDC_YAML.curie('nmdc/collection_time_inc'), +slots.SoilMixsInspiredMixin_collection_time_inc = Slot(uri=NMDC['nmdc/collection_time_inc'], name="SoilMixsInspiredMixin_collection_time_inc", curie=NMDC.curie('nmdc/collection_time_inc'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_collection_time_inc, domain=None, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) -slots.SoilMixsInspiredMixin_experimental_factor_other = Slot(uri=NMDC_YAML['nmdc/experimental_factor_other'], name="SoilMixsInspiredMixin_experimental_factor_other", curie=NMDC_YAML.curie('nmdc/experimental_factor_other'), +slots.SoilMixsInspiredMixin_experimental_factor_other = Slot(uri=NMDC['nmdc/experimental_factor_other'], name="SoilMixsInspiredMixin_experimental_factor_other", curie=NMDC.curie('nmdc/experimental_factor_other'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_experimental_factor_other, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_filter_method = Slot(uri=NMDC_YAML['nmdc/filter_method'], name="SoilMixsInspiredMixin_filter_method", curie=NMDC_YAML.curie('nmdc/filter_method'), +slots.SoilMixsInspiredMixin_filter_method = Slot(uri=NMDC['nmdc/filter_method'], name="SoilMixsInspiredMixin_filter_method", curie=NMDC.curie('nmdc/filter_method'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_filter_method, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_isotope_exposure = Slot(uri=NMDC_YAML['nmdc/isotope_exposure'], name="SoilMixsInspiredMixin_isotope_exposure", curie=NMDC_YAML.curie('nmdc/isotope_exposure'), +slots.SoilMixsInspiredMixin_isotope_exposure = Slot(uri=NMDC['nmdc/isotope_exposure'], name="SoilMixsInspiredMixin_isotope_exposure", curie=NMDC.curie('nmdc/isotope_exposure'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_isotope_exposure, domain=None, range=Optional[str], pattern=re.compile(r'^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]; ([\+-]?\d{4}(?!\d{2}\b))((-?)((0[1-9]|1[0-2])(\3([12]\d|0[1-9]|3[01]))?|W([0-4]\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\d|[12]\d{2}|3([0-5]\d|6[1-6])))([T\s]((([01]\d|2[0-3])((:?)[0-5]\d)?|24\:?00)([\.,]\d+(?!:))?)?(\17[0-5]\d([\.,]\d+)?)?([zZ]|([\+-])([01]\d|2[0-3]):?([0-5]\d)?)?)?)?$')) -slots.SoilMixsInspiredMixin_micro_biomass_c_meth = Slot(uri=NMDC_YAML['nmdc/micro_biomass_c_meth'], name="SoilMixsInspiredMixin_micro_biomass_c_meth", curie=NMDC_YAML.curie('nmdc/micro_biomass_c_meth'), +slots.SoilMixsInspiredMixin_micro_biomass_c_meth = Slot(uri=NMDC['nmdc/micro_biomass_c_meth'], name="SoilMixsInspiredMixin_micro_biomass_c_meth", curie=NMDC.curie('nmdc/micro_biomass_c_meth'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_micro_biomass_c_meth, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_micro_biomass_n_meth = Slot(uri=NMDC_YAML['nmdc/micro_biomass_n_meth'], name="SoilMixsInspiredMixin_micro_biomass_n_meth", curie=NMDC_YAML.curie('nmdc/micro_biomass_n_meth'), +slots.SoilMixsInspiredMixin_micro_biomass_n_meth = Slot(uri=NMDC['nmdc/micro_biomass_n_meth'], name="SoilMixsInspiredMixin_micro_biomass_n_meth", curie=NMDC.curie('nmdc/micro_biomass_n_meth'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_micro_biomass_n_meth, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_microbial_biomass_c = Slot(uri=NMDC_YAML['nmdc/microbial_biomass_c'], name="SoilMixsInspiredMixin_microbial_biomass_c", curie=NMDC_YAML.curie('nmdc/microbial_biomass_c'), +slots.SoilMixsInspiredMixin_microbial_biomass_c = Slot(uri=NMDC['nmdc/microbial_biomass_c'], name="SoilMixsInspiredMixin_microbial_biomass_c", curie=NMDC.curie('nmdc/microbial_biomass_c'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_microbial_biomass_c, domain=None, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? \S+$')) -slots.SoilMixsInspiredMixin_microbial_biomass_n = Slot(uri=NMDC_YAML['nmdc/microbial_biomass_n'], name="SoilMixsInspiredMixin_microbial_biomass_n", curie=NMDC_YAML.curie('nmdc/microbial_biomass_n'), +slots.SoilMixsInspiredMixin_microbial_biomass_n = Slot(uri=NMDC['nmdc/microbial_biomass_n'], name="SoilMixsInspiredMixin_microbial_biomass_n", curie=NMDC.curie('nmdc/microbial_biomass_n'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_microbial_biomass_n, domain=None, range=Optional[str], pattern=re.compile(r'^[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? \S+$')) -slots.SoilMixsInspiredMixin_non_microb_biomass = Slot(uri=NMDC_YAML['nmdc/non_microb_biomass'], name="SoilMixsInspiredMixin_non_microb_biomass", curie=NMDC_YAML.curie('nmdc/non_microb_biomass'), +slots.SoilMixsInspiredMixin_non_microb_biomass = Slot(uri=NMDC['nmdc/non_microb_biomass'], name="SoilMixsInspiredMixin_non_microb_biomass", curie=NMDC.curie('nmdc/non_microb_biomass'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_non_microb_biomass, domain=None, range=Optional[str], pattern=re.compile(r'^[^;\t\r\x0A\|]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^;\t\r\x0A\|]+$')) -slots.SoilMixsInspiredMixin_non_microb_biomass_method = Slot(uri=NMDC_YAML['nmdc/non_microb_biomass_method'], name="SoilMixsInspiredMixin_non_microb_biomass_method", curie=NMDC_YAML.curie('nmdc/non_microb_biomass_method'), +slots.SoilMixsInspiredMixin_non_microb_biomass_method = Slot(uri=NMDC['nmdc/non_microb_biomass_method'], name="SoilMixsInspiredMixin_non_microb_biomass_method", curie=NMDC.curie('nmdc/non_microb_biomass_method'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_non_microb_biomass_method, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_org_nitro_method = Slot(uri=NMDC_YAML['nmdc/org_nitro_method'], name="SoilMixsInspiredMixin_org_nitro_method", curie=NMDC_YAML.curie('nmdc/org_nitro_method'), +slots.SoilMixsInspiredMixin_org_nitro_method = Slot(uri=NMDC['nmdc/org_nitro_method'], name="SoilMixsInspiredMixin_org_nitro_method", curie=NMDC.curie('nmdc/org_nitro_method'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_org_nitro_method, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_other_treatment = Slot(uri=NMDC_YAML['nmdc/other_treatment'], name="SoilMixsInspiredMixin_other_treatment", curie=NMDC_YAML.curie('nmdc/other_treatment'), +slots.SoilMixsInspiredMixin_other_treatment = Slot(uri=NMDC['nmdc/other_treatment'], name="SoilMixsInspiredMixin_other_treatment", curie=NMDC.curie('nmdc/other_treatment'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_other_treatment, domain=None, range=Optional[str]) -slots.SoilMixsInspiredMixin_start_date_inc = Slot(uri=NMDC_YAML['nmdc/start_date_inc'], name="SoilMixsInspiredMixin_start_date_inc", curie=NMDC_YAML.curie('nmdc/start_date_inc'), +slots.SoilMixsInspiredMixin_start_date_inc = Slot(uri=NMDC['nmdc/start_date_inc'], name="SoilMixsInspiredMixin_start_date_inc", curie=NMDC.curie('nmdc/start_date_inc'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_start_date_inc, domain=None, range=Optional[str], pattern=re.compile(r'^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$')) -slots.SoilMixsInspiredMixin_start_time_inc = Slot(uri=NMDC_YAML['nmdc/start_time_inc'], name="SoilMixsInspiredMixin_start_time_inc", curie=NMDC_YAML.curie('nmdc/start_time_inc'), +slots.SoilMixsInspiredMixin_start_time_inc = Slot(uri=NMDC['nmdc/start_time_inc'], name="SoilMixsInspiredMixin_start_time_inc", curie=NMDC.curie('nmdc/start_time_inc'), model_uri=NMDC_SUB_SCHEMA.SoilMixsInspiredMixin_start_time_inc, domain=None, range=Optional[str], pattern=re.compile(r'^([01]?\d|2[0-3]|24(?=:00?:00?$)):([0-5]\d)(:([0-5]\d))?$')) \ No newline at end of file diff --git a/src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml b/src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml index b716e376..adb6ba48 100644 --- a/src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml +++ b/src/nmdc_submission_schema/schema/nmdc_submission_schema.yaml @@ -26,25 +26,52 @@ prefixes: prefix_reference: http://schema.org/ EFO: prefix_prefix: EFO - prefix_reference: http://identifiers.org/efo/ + prefix_reference: http://www.ebi.ac.uk/efo/ ISA: prefix_prefix: ISA - prefix_reference: https://unknown.to.linter.org/ - NCIT: - prefix_prefix: NCIT - prefix_reference: http://purl.obolibrary.org/obo/NCIT_ - OBI: - prefix_prefix: OBI - prefix_reference: http://purl.obolibrary.org/obo/OBI_ - bare: - prefix_prefix: bare - prefix_reference: https://unknown.to.linter.org/ + prefix_reference: http://example.com/isa/ + MetaNetX: + prefix_prefix: MetaNetX + prefix_reference: http://example.com/metanetx/ + RetroRules: + prefix_prefix: RetroRules + prefix_reference: http://example.com/retrorules/ + emsl.project: + prefix_prefix: emsl.project + prefix_reference: 'https://bioregistry.io/emsl.project:' + generic: + prefix_prefix: generic + prefix_reference: https://example.com/generic/ + gnps.task: + prefix_prefix: gnps.task + prefix_reference: 'https://bioregistry.io/gnps.task:' + gtpo: + prefix_prefix: gtpo + prefix_reference: http://example.com/gtpo/ + igsn: + prefix_prefix: igsn + prefix_reference: https://app.geosamples.org/sample/igsn/ + jgi.proposal: + prefix_prefix: jgi.proposal + prefix_reference: 'https://bioregistry.io/jgi.proposal:' + jgi: + prefix_prefix: jgi + prefix_reference: http://example.com/jgi/ + mgnify.proj: + prefix_prefix: mgnify.proj + prefix_reference: 'https://identifiers.org/mgnify.proj:' + neon.identifier: + prefix_prefix: neon.identifier + prefix_reference: http://example.org/neon/identifier/ + neon.schema: + prefix_prefix: neon.schema + prefix_reference: http://example.org/neon/schema/ nmdc: prefix_prefix: nmdc prefix_reference: https://w3id.org/nmdc/ - nmdc_yaml: - prefix_prefix: nmdc_yaml - prefix_reference: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/ + skos: + prefix_prefix: skos + prefix_reference: http://www.w3.org/2004/02/skos/core# prov: prefix_prefix: prov prefix_reference: http://www.w3.org/ns/prov# @@ -54,30 +81,18 @@ prefixes: rdfs: prefix_prefix: rdfs prefix_reference: http://www.w3.org/2000/01/rdf-schema# - skos: - prefix_prefix: skos - prefix_reference: http://www.w3.org/2004/02/skos/core# - NCBITaxon: - prefix_prefix: NCBITaxon - prefix_reference: http://purl.obolibrary.org/obo/NCBITaxon_ - jgi: - prefix_prefix: jgi - prefix_reference: https://unknown.to.linter.org/ - dcterms: - prefix_prefix: dcterms - prefix_reference: http://purl.org/dc/terms/ KEGG.COMPOUND: prefix_prefix: KEGG.COMPOUND prefix_reference: http://identifiers.org/kegg.compound/ + dcterms: + prefix_prefix: dcterms + prefix_reference: http://purl.org/dc/terms/ UniProtKB: prefix_prefix: UniProtKB prefix_reference: https://identifiers.org/uniprot/ biolink: prefix_prefix: biolink prefix_reference: https://w3id.org/biolink/vocab/ - gtpo: - prefix_prefix: gtpo - prefix_reference: https://unknown.to.linter.org/ sio: prefix_prefix: sio prefix_reference: http://semanticscience.org/resource/SIO_ @@ -93,6 +108,9 @@ prefixes: CHMO: prefix_prefix: CHMO prefix_reference: http://purl.obolibrary.org/obo/CHMO_ + OBI: + prefix_prefix: OBI + prefix_reference: http://purl.obolibrary.org/obo/OBI_ MIXS: prefix_prefix: MIXS prefix_reference: https://w3id.org/mixs/ @@ -101,10 +119,10 @@ prefixes: prefix_reference: https://raw.githubusercontent.com/microbiomedata/mixs/main/model/schema/ COG: prefix_prefix: COG - prefix_reference: https://unknown.to.linter.org/ + prefix_reference: 'https://bioregistry.io/cog:' EC: prefix_prefix: EC - prefix_reference: https://unknown.to.linter.org/ + prefix_reference: 'https://bioregistry.io/eccode:' GO: prefix_prefix: GO prefix_reference: http://purl.obolibrary.org/obo/GO_ @@ -120,15 +138,9 @@ prefixes: MetaCyc: prefix_prefix: MetaCyc prefix_reference: https://identifiers.org/metacyc.reaction/ - MetaNetX: - prefix_prefix: MetaNetX - prefix_reference: https://unknown.to.linter.org/ RHEA: prefix_prefix: RHEA prefix_reference: http://identifiers.org/rhea/ - RetroRules: - prefix_prefix: RetroRules - prefix_reference: https://unknown.to.linter.org/ SEED: prefix_prefix: SEED prefix_reference: http://identifiers.org/seed/ @@ -1542,30 +1554,6 @@ enums: other: text: other description: placeholder PV descr, DO NOT SORT - window_mat_enum: - name: window_mat_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - clad: - text: clad - fiberglass: - text: fiberglass - metal: - text: metal - vinyl: - text: vinyl - wood: - text: wood - substructure_type_enum: - name: substructure_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - crawlspace: - text: crawlspace - slab on grade: - text: slab on grade - basement: - text: basement filter_type_enum: name: filter_type_enum from_schema: https://example.com/nmdc_submission_schema @@ -1582,88 +1570,8 @@ enums: text: electrostatic gas-phase or ultraviolet air treatments: text: gas-phase or ultraviolet air treatments - weekday_enum: - name: weekday_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - Monday: - text: Monday - Tuesday: - text: Tuesday - Wednesday: - text: Wednesday - Thursday: - text: Thursday - Friday: - text: Friday - Saturday: - text: Saturday - Sunday: - text: Sunday - train_line_enum: - name: train_line_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - red: - text: red - green: - text: green - orange: - text: orange - door_direct_enum: - name: door_direct_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - inward: - text: inward - outward: - text: outward - sideways: - text: sideways - furniture_enum: - name: furniture_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - cabinet: - text: cabinet - chair: - text: chair - desks: - text: desks - occup_document_enum: - name: occup_document_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - automated count: - text: automated count - estimate: - text: estimate - manual count: - text: manual count - videos: - text: videos - window_horiz_pos_enum: - name: window_horiz_pos_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - left: - text: left - middle: - text: middle - right: - text: right - window_cover_enum: - name: window_cover_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - blinds: - text: blinds - curtains: - text: curtains - none: - text: none - shading_device_cond_enum: - name: shading_device_cond_enum + window_cond_enum: + name: window_cond_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: damaged: @@ -1676,34 +1584,42 @@ enums: text: rupture visible wear: text: visible wear - int_wall_cond_enum: - name: int_wall_cond_enum + wall_finish_mat_enum: + name: wall_finish_mat_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - new: - text: new - visible wear: - text: visible wear - needs repair: - text: needs repair - damaged: - text: damaged - rupture: - text: rupture - light_type_enum: - name: light_type_enum + plaster: + text: plaster + gypsum plaster: + text: gypsum plaster + veneer plaster: + text: veneer plaster + gypsum board: + text: gypsum board + tile: + text: tile + terrazzo: + text: terrazzo + stone facing: + text: stone facing + acoustical treatment: + text: acoustical treatment + wood: + text: wood + metal: + text: metal + masonry: + text: masonry + window_horiz_pos_enum: + name: window_horiz_pos_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - natural light: - text: natural light - electric light: - text: electric light - desk lamp: - text: desk lamp - flourescent lights: - text: flourescent lights - none: - text: none + left: + text: left + middle: + text: middle + right: + text: right ext_window_orient_enum: name: ext_window_orient_enum from_schema: https://example.com/nmdc_submission_schema @@ -1724,244 +1640,58 @@ enums: text: southwest northwest: text: northwest - arch_struc_enum: - name: arch_struc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - building: - text: building - shed: - text: shed - home: - text: home - floor_struc_enum: - name: floor_struc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - balcony: - text: balcony - floating floor: - text: floating floor - glass floor: - text: glass floor - raised floor: - text: raised floor - sprung floor: - text: sprung floor - wood-framed: - text: wood-framed - concrete: - text: concrete - handidness_enum: - name: handidness_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - ambidexterity: - text: ambidexterity - left handedness: - text: left handedness - mixed-handedness: - text: mixed-handedness - right handedness: - text: right handedness - wall_surf_treatment_enum: - name: wall_surf_treatment_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - painted: - text: painted - wall paper: - text: wall paper - no treatment: - text: no treatment - paneling: - text: paneling - stucco: - text: stucco - fabric: - text: fabric - specific_enum: - name: specific_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - operation: - text: operation - as built: - text: as built - construction: - text: construction - bid: - text: bid - design: - text: design - photos: - text: photos - window_loc_enum: - name: window_loc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - north: - text: north - south: - text: south - east: - text: east - west: - text: west - building_setting_enum: - name: building_setting_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - urban: - text: urban - suburban: - text: suburban - exurban: - text: exurban - rural: - text: rural - samp_floor_enum: - name: samp_floor_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - 1st floor: - text: 1st floor - 2nd floor: - text: 2nd floor - basement: - text: basement - lobby: - text: lobby - vis_media_enum: - name: vis_media_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - photos: - text: photos - videos: - text: videos - commonly of the building: - text: commonly of the building - site context (adjacent buildings, vegetation, terrain, streets): - text: site context (adjacent buildings, vegetation, terrain, streets) - interiors: - text: interiors - equipment: - text: equipment - 3D scans: - text: 3D scans - indoor_space_enum: - name: indoor_space_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - bedroom: - text: bedroom - office: - text: office - bathroom: - text: bathroom - foyer: - text: foyer - kitchen: - text: kitchen - locker room: - text: locker room - hallway: - text: hallway - elevator: - text: elevator - ceil_texture_enum: - name: ceil_texture_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - crows feet: - text: crows feet - crows-foot stomp: - text: crows-foot stomp - double skip: - text: double skip - hawk and trowel: - text: hawk and trowel - knockdown: - text: knockdown - popcorn: - text: popcorn - orange peel: - text: orange peel - rosebud stomp: - text: rosebud stomp - Santa-Fe texture: - text: Santa-Fe texture - skip trowel: - text: skip trowel - smooth: - text: smooth - stomp knockdown: - text: stomp knockdown - swirl: - text: swirl - door_move_enum: - name: door_move_enum + samp_weather_enum: + name: samp_weather_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - collapsible: - text: collapsible - folding: - text: folding - revolving: - text: revolving - rolling shutter: - text: rolling shutter - sliding: - text: sliding - swinging: - text: swinging - door_comp_type_enum: - name: door_comp_type_enum + clear sky: + text: clear sky + cloudy: + text: cloudy + foggy: + text: foggy + hail: + text: hail + rain: + text: rain + snow: + text: snow + sleet: + text: sleet + sunny: + text: sunny + windy: + text: windy + floor_cond_enum: + name: floor_cond_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - metal covered: - text: metal covered - revolving: - text: revolving - sliding: - text: sliding - telescopic: - text: telescopic - wall_texture_enum: - name: wall_texture_enum + new: + text: new + visible wear: + text: visible wear + needs repair: + text: needs repair + damaged: + text: damaged + rupture: + text: rupture + window_mat_enum: + name: window_mat_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - crows feet: - text: crows feet - crows-foot stomp: - text: crows-foot stomp - '': - text: '' - double skip: - text: double skip - hawk and trowel: - text: hawk and trowel - knockdown: - text: knockdown - popcorn: - text: popcorn - orange peel: - text: orange peel - rosebud stomp: - text: rosebud stomp - Santa-Fe texture: - text: Santa-Fe texture - skip trowel: - text: skip trowel - smooth: - text: smooth - stomp knockdown: - text: stomp knockdown - swirl: - text: swirl - wall_loc_enum: - name: wall_loc_enum + clad: + text: clad + fiberglass: + text: fiberglass + metal: + text: metal + vinyl: + text: vinyl + wood: + text: wood + ext_wall_orient_enum: + name: ext_wall_orient_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: north: @@ -1972,6 +1702,14 @@ enums: text: east west: text: west + northeast: + text: northeast + southeast: + text: southeast + southwest: + text: southwest + northwest: + text: northwest floor_water_mold_enum: name: floor_water_mold_enum from_schema: https://example.com/nmdc_submission_schema @@ -1994,80 +1732,64 @@ enums: text: bulging walls condensation: text: condensation - door_type_enum: - name: door_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - composite: - text: composite - metal: - text: metal - wooden: - text: wooden - window_cond_enum: - name: window_cond_enum + weekday_enum: + name: weekday_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - damaged: - text: damaged - needs repair: - text: needs repair - new: - text: new - rupture: - text: rupture - visible wear: - text: visible wear - water_feat_type_enum: - name: water_feat_type_enum + Monday: + text: Monday + Tuesday: + text: Tuesday + Wednesday: + text: Wednesday + Thursday: + text: Thursday + Friday: + text: Friday + Saturday: + text: Saturday + Sunday: + text: Sunday + window_cover_enum: + name: window_cover_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - fountain: - text: fountain - pool: - text: pool - standing feature: - text: standing feature - stream: - text: stream - waterfall: - text: waterfall - floor_cond_enum: - name: floor_cond_enum + blinds: + text: blinds + curtains: + text: curtains + none: + text: none + light_type_enum: + name: light_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - new: - text: new - visible wear: - text: visible wear - needs repair: - text: needs repair - damaged: - text: damaged - rupture: - text: rupture - indoor_surf_enum: - name: indoor_surf_enum + natural light: + text: natural light + electric light: + text: electric light + desk lamp: + text: desk lamp + flourescent lights: + text: flourescent lights + none: + text: none + heat_cool_type_enum: + name: heat_cool_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - cabinet: - text: cabinet - ceiling: - text: ceiling - counter top: - text: counter top - door: - text: door - shelving: - text: shelving - vent cover: - text: vent cover - window: - text: window - wall: - text: wall - ext_wall_orient_enum: - name: ext_wall_orient_enum + radiant system: + text: radiant system + heat pump: + text: heat pump + forced air system: + text: forced air system + steam forced heat: + text: steam forced heat + wood stove: + text: wood stove + window_loc_enum: + name: window_loc_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: north: @@ -2078,70 +1800,18 @@ enums: text: east west: text: west - northeast: - text: northeast - southeast: - text: southeast - southwest: - text: southwest - northwest: - text: northwest - build_occup_type_enum: - name: build_occup_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - office: - text: office - market: - text: market - restaurant: - text: restaurant - residence: - text: residence - school: - text: school - residential: - text: residential - commercial: - text: commercial - low rise: - text: low rise - high rise: - text: high rise - wood framed: - text: wood framed - health care: - text: health care - airport: - text: airport - sports complex: - text: sports complex - door_mat_enum: - name: door_mat_enum + door_type_enum: + name: door_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - aluminum: - text: aluminum - cellular PVC: - text: cellular PVC - engineered plastic: - text: engineered plastic - fiberboard: - text: fiberboard - fiberglass: - text: fiberglass + composite: + text: composite metal: text: metal - thermoplastic alloy: - text: thermoplastic alloy - vinyl: - text: vinyl - wood: - text: wood - wood/plastic composite: - text: wood/plastic composite - door_loc_enum: - name: door_loc_enum + wooden: + text: wooden + wall_loc_enum: + name: wall_loc_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: north: @@ -2152,48 +1822,6 @@ enums: text: east west: text: west - mech_struc_enum: - name: mech_struc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - subway: - text: subway - coach: - text: coach - carriage: - text: carriage - elevator: - text: elevator - escalator: - text: escalator - boat: - text: boat - train: - text: train - car: - text: car - bus: - text: bus - surf_air_cont_enum: - name: surf_air_cont_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - dust: - text: dust - organic matter: - text: organic matter - particulate matter: - text: particulate matter - volatile organic compounds: - text: volatile organic compounds - biological contaminants: - text: biological contaminants - radon: - text: radon - nutrients: - text: nutrients - biocides: - text: biocides shading_device_type_enum: name: shading_device_type_enum from_schema: https://example.com/nmdc_submission_schema @@ -2222,140 +1850,6 @@ enums: text: trellis venetian awning: text: venetian awning - room_loc_enum: - name: room_loc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - corner room: - text: corner room - interior room: - text: interior room - exterior wall: - text: exterior wall - room_condt_enum: - name: room_condt_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - new: - text: new - visible wear: - text: visible wear - needs repair: - text: needs repair - damaged: - text: damaged - rupture: - text: rupture - visible signs of mold/mildew: - text: visible signs of mold/mildew - surf_material_enum: - name: surf_material_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - adobe: - text: adobe - carpet: - text: carpet - cinder blocks: - text: cinder blocks - concrete: - text: concrete - hay bales: - text: hay bales - glass: - text: glass - metal: - text: metal - paint: - text: paint - plastic: - text: plastic - stainless steel: - text: stainless steel - stone: - text: stone - stucco: - text: stucco - tile: - text: tile - vinyl: - text: vinyl - wood: - text: wood - ceil_finish_mat_enum: - name: ceil_finish_mat_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - drywall: - text: drywall - mineral fibre: - text: mineral fibre - tiles: - text: tiles - PVC: - text: PVC - plasterboard: - text: plasterboard - metal: - text: metal - fiberglass: - text: fiberglass - stucco: - text: stucco - mineral wool/calcium silicate: - text: mineral wool/calcium silicate - wood: - text: wood - door_type_wood_enum: - name: door_type_wood_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - bettened and ledged: - text: bettened and ledged - battened: - text: battened - ledged and braced: - text: ledged and braced - ledged and framed: - text: ledged and framed - ledged, braced and frame: - text: ledged, braced and frame - framed and paneled: - text: framed and paneled - glashed or sash: - text: glashed or sash - flush: - text: flush - louvered: - text: louvered - wire gauged: - text: wire gauged - heat_deliv_loc_enum: - name: heat_deliv_loc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - north: - text: north - south: - text: south - east: - text: east - west: - text: west - train_stat_loc_enum: - name: train_stat_loc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - south station above ground: - text: south station above ground - south station underground: - text: south station underground - south station amtrak: - text: south station amtrak - forest hills: - text: forest hills - riverside: - text: riverside floor_finish_mat_enum: name: floor_finish_mat_enum from_schema: https://example.com/nmdc_submission_schema @@ -2396,134 +1890,16 @@ enums: text: paint none or unfinished: text: none or unfinished - window_type_enum: - name: window_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - single-hung sash window: - text: single-hung sash window - horizontal sash window: - text: horizontal sash window - fixed window: - text: fixed window - drawings_enum: - name: drawings_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - operation: - text: operation - as built: - text: as built - construction: - text: construction - bid: - text: bid - design: - text: design - building navigation map: - text: building navigation map - diagram: - text: diagram - sketch: - text: sketch - wall_const_type_enum: - name: wall_const_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - frame construction: - text: frame construction - joisted masonry: - text: joisted masonry - light noncombustible: - text: light noncombustible - masonry noncombustible: - text: masonry noncombustible - modified fire resistive: - text: modified fire resistive - fire resistive: - text: fire resistive - wall_finish_mat_enum: - name: wall_finish_mat_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - plaster: - text: plaster - gypsum plaster: - text: gypsum plaster - veneer plaster: - text: veneer plaster - gypsum board: - text: gypsum board - tile: - text: tile - terrazzo: - text: terrazzo - stone facing: - text: stone facing - acoustical treatment: - text: acoustical treatment - wood: - text: wood - metal: - text: metal - masonry: - text: masonry - heat_cool_type_enum: - name: heat_cool_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - radiant system: - text: radiant system - heat pump: - text: heat pump - forced air system: - text: forced air system - steam forced heat: - text: steam forced heat - wood stove: - text: wood stove - window_vert_pos_enum: - name: window_vert_pos_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - bottom: - text: bottom - middle: - text: middle - top: - text: top - low: - text: low - high: - text: high - ceil_cond_enum: - name: ceil_cond_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - new: - text: new - visible wear: - text: visible wear - needs repair: - text: needs repair - damaged: - text: damaged - rupture: - text: rupture - door_cond_enum: - name: door_cond_enum + substructure_type_enum: + name: substructure_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - damaged: - text: damaged - needs repair: - text: needs repair - new: - text: new - rupture: - text: rupture - visible wear: - text: visible wear + crawlspace: + text: crawlspace + slab on grade: + text: slab on grade + basement: + text: basement rel_samp_loc_enum: name: rel_samp_loc_enum from_schema: https://example.com/nmdc_submission_schema @@ -2534,8 +1910,8 @@ enums: text: center of car under a seat: text: under a seat - room_connected_enum: - name: room_connected_enum + room_type_enum: + name: room_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: attic: @@ -2556,20 +1932,378 @@ enums: text: kitchen mail room: text: mail room - office: - text: office + private office: + text: private office + open office: + text: open office stairwell: text: stairwell - train_stop_loc_enum: - name: train_stop_loc_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - end: - text: end - mid: - text: mid - downtown: - text: downtown + ',restroom': + text: ',restroom' + lobby: + text: lobby + vestibule: + text: vestibule + mechanical or electrical room: + text: mechanical or electrical room + data center: + text: data center + laboratory_wet: + text: laboratory_wet + laboratory_dry: + text: laboratory_dry + gymnasium: + text: gymnasium + natatorium: + text: natatorium + auditorium: + text: auditorium + lockers: + text: lockers + cafe: + text: cafe + warehouse: + text: warehouse + heat_deliv_loc_enum: + name: heat_deliv_loc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + north: + text: north + south: + text: south + east: + text: east + west: + text: west + wall_texture_enum: + name: wall_texture_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + crows feet: + text: crows feet + crows-foot stomp: + text: crows-foot stomp + '': + text: '' + double skip: + text: double skip + hawk and trowel: + text: hawk and trowel + knockdown: + text: knockdown + popcorn: + text: popcorn + orange peel: + text: orange peel + rosebud stomp: + text: rosebud stomp + Santa-Fe texture: + text: Santa-Fe texture + skip trowel: + text: skip trowel + smooth: + text: smooth + stomp knockdown: + text: stomp knockdown + swirl: + text: swirl + train_line_enum: + name: train_line_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + red: + text: red + green: + text: green + orange: + text: orange + arch_struc_enum: + name: arch_struc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + building: + text: building + shed: + text: shed + home: + text: home + door_cond_enum: + name: door_cond_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + damaged: + text: damaged + needs repair: + text: needs repair + new: + text: new + rupture: + text: rupture + visible wear: + text: visible wear + building_setting_enum: + name: building_setting_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + urban: + text: urban + suburban: + text: suburban + exurban: + text: exurban + rural: + text: rural + specific_enum: + name: specific_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + operation: + text: operation + as built: + text: as built + construction: + text: construction + bid: + text: bid + design: + text: design + photos: + text: photos + wall_const_type_enum: + name: wall_const_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + frame construction: + text: frame construction + joisted masonry: + text: joisted masonry + light noncombustible: + text: light noncombustible + masonry noncombustible: + text: masonry noncombustible + modified fire resistive: + text: modified fire resistive + fire resistive: + text: fire resistive + indoor_space_enum: + name: indoor_space_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + bedroom: + text: bedroom + office: + text: office + bathroom: + text: bathroom + foyer: + text: foyer + kitchen: + text: kitchen + locker room: + text: locker room + hallway: + text: hallway + elevator: + text: elevator + gender_restroom_enum: + name: gender_restroom_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + all gender: + text: all gender + female: + text: female + gender neurtral: + text: gender neurtral + male: + text: male + male and female: + text: male and female + unisex: + text: unisex + window_type_enum: + name: window_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + single-hung sash window: + text: single-hung sash window + horizontal sash window: + text: horizontal sash window + fixed window: + text: fixed window + mech_struc_enum: + name: mech_struc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + subway: + text: subway + coach: + text: coach + carriage: + text: carriage + elevator: + text: elevator + escalator: + text: escalator + boat: + text: boat + train: + text: train + car: + text: car + bus: + text: bus + door_type_wood_enum: + name: door_type_wood_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + bettened and ledged: + text: bettened and ledged + battened: + text: battened + ledged and braced: + text: ledged and braced + ledged and framed: + text: ledged and framed + ledged, braced and frame: + text: ledged, braced and frame + framed and paneled: + text: framed and paneled + glashed or sash: + text: glashed or sash + flush: + text: flush + louvered: + text: louvered + wire gauged: + text: wire gauged + water_feat_type_enum: + name: water_feat_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + fountain: + text: fountain + pool: + text: pool + standing feature: + text: standing feature + stream: + text: stream + waterfall: + text: waterfall + door_type_metal_enum: + name: door_type_metal_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + collapsible: + text: collapsible + corrugated steel: + text: corrugated steel + hollow: + text: hollow + rolling shutters: + text: rolling shutters + steel plate: + text: steel plate + room_connected_enum: + name: room_connected_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + attic: + text: attic + bathroom: + text: bathroom + closet: + text: closet + conference room: + text: conference room + elevator: + text: elevator + examining room: + text: examining room + hallway: + text: hallway + kitchen: + text: kitchen + mail room: + text: mail room + office: + text: office + stairwell: + text: stairwell + door_loc_enum: + name: door_loc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + north: + text: north + south: + text: south + east: + text: east + west: + text: west + room_loc_enum: + name: room_loc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + corner room: + text: corner room + interior room: + text: interior room + exterior wall: + text: exterior wall + window_vert_pos_enum: + name: window_vert_pos_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + bottom: + text: bottom + middle: + text: middle + top: + text: top + low: + text: low + high: + text: high + handidness_enum: + name: handidness_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + ambidexterity: + text: ambidexterity + left handedness: + text: left handedness + mixed-handedness: + text: mixed-handedness + right handedness: + text: right handedness + door_mat_enum: + name: door_mat_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + aluminum: + text: aluminum + cellular PVC: + text: cellular PVC + engineered plastic: + text: engineered plastic + fiberboard: + text: fiberboard + fiberglass: + text: fiberglass + metal: + text: metal + thermoplastic alloy: + text: thermoplastic alloy + vinyl: + text: vinyl + wood: + text: wood + wood/plastic composite: + text: wood/plastic composite quad_pos_enum: name: quad_pos_enum from_schema: https://example.com/nmdc_submission_schema @@ -2582,24 +2316,410 @@ enums: text: South side East side: text: East side - ceil_type_enum: - name: ceil_type_enum + season_use_enum: + name: season_use_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + Spring: + text: Spring + Summer: + text: Summer + Fall: + text: Fall + Winter: + text: Winter + samp_floor_enum: + name: samp_floor_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + 1st floor: + text: 1st floor + 2nd floor: + text: 2nd floor + basement: + text: basement + lobby: + text: lobby + door_direct_enum: + name: door_direct_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + inward: + text: inward + outward: + text: outward + sideways: + text: sideways + surf_air_cont_enum: + name: surf_air_cont_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + dust: + text: dust + organic matter: + text: organic matter + particulate matter: + text: particulate matter + volatile organic compounds: + text: volatile organic compounds + biological contaminants: + text: biological contaminants + radon: + text: radon + nutrients: + text: nutrients + biocides: + text: biocides + occup_document_enum: + name: occup_document_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + automated count: + text: automated count + estimate: + text: estimate + manual count: + text: manual count + videos: + text: videos + room_condt_enum: + name: room_condt_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + new: + text: new + visible wear: + text: visible wear + needs repair: + text: needs repair + damaged: + text: damaged + rupture: + text: rupture + visible signs of mold/mildew: + text: visible signs of mold/mildew + ceil_cond_enum: + name: ceil_cond_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + new: + text: new + visible wear: + text: visible wear + needs repair: + text: needs repair + damaged: + text: damaged + rupture: + text: rupture + shading_device_cond_enum: + name: shading_device_cond_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + damaged: + text: damaged + needs repair: + text: needs repair + new: + text: new + rupture: + text: rupture + visible wear: + text: visible wear + ceil_finish_mat_enum: + name: ceil_finish_mat_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + drywall: + text: drywall + mineral fibre: + text: mineral fibre + tiles: + text: tiles + PVC: + text: PVC + plasterboard: + text: plasterboard + metal: + text: metal + fiberglass: + text: fiberglass + stucco: + text: stucco + mineral wool/calcium silicate: + text: mineral wool/calcium silicate + wood: + text: wood + wall_surf_treatment_enum: + name: wall_surf_treatment_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + painted: + text: painted + wall paper: + text: wall paper + no treatment: + text: no treatment + paneling: + text: paneling + stucco: + text: stucco + fabric: + text: fabric + furniture_enum: + name: furniture_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + cabinet: + text: cabinet + chair: + text: chair + desks: + text: desks + ceil_texture_enum: + name: ceil_texture_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + crows feet: + text: crows feet + crows-foot stomp: + text: crows-foot stomp + double skip: + text: double skip + hawk and trowel: + text: hawk and trowel + knockdown: + text: knockdown + popcorn: + text: popcorn + orange peel: + text: orange peel + rosebud stomp: + text: rosebud stomp + Santa-Fe texture: + text: Santa-Fe texture + skip trowel: + text: skip trowel + smooth: + text: smooth + stomp knockdown: + text: stomp knockdown + swirl: + text: swirl + floor_struc_enum: + name: floor_struc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + balcony: + text: balcony + floating floor: + text: floating floor + glass floor: + text: glass floor + raised floor: + text: raised floor + sprung floor: + text: sprung floor + wood-framed: + text: wood-framed + concrete: + text: concrete + indoor_surf_enum: + name: indoor_surf_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + cabinet: + text: cabinet + ceiling: + text: ceiling + counter top: + text: counter top + door: + text: door + shelving: + text: shelving + vent cover: + text: vent cover + window: + text: window + wall: + text: wall + train_stop_loc_enum: + name: train_stop_loc_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + end: + text: end + mid: + text: mid + downtown: + text: downtown + vis_media_enum: + name: vis_media_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + photos: + text: photos + videos: + text: videos + commonly of the building: + text: commonly of the building + site context (adjacent buildings, vegetation, terrain, streets): + text: site context (adjacent buildings, vegetation, terrain, streets) + interiors: + text: interiors + equipment: + text: equipment + 3D scans: + text: 3D scans + door_move_enum: + name: door_move_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + collapsible: + text: collapsible + folding: + text: folding + revolving: + text: revolving + rolling shutter: + text: rolling shutter + sliding: + text: sliding + swinging: + text: swinging + room_samp_pos_enum: + name: room_samp_pos_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + north corner: + text: north corner + south corner: + text: south corner + west corner: + text: west corner + east corner: + text: east corner + northeast corner: + text: northeast corner + northwest corner: + text: northwest corner + southeast corner: + text: southeast corner + southwest corner: + text: southwest corner + center: + text: center + surf_material_enum: + name: surf_material_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + adobe: + text: adobe + carpet: + text: carpet + cinder blocks: + text: cinder blocks + concrete: + text: concrete + hay bales: + text: hay bales + glass: + text: glass + metal: + text: metal + paint: + text: paint + plastic: + text: plastic + stainless steel: + text: stainless steel + stone: + text: stone + stucco: + text: stucco + tile: + text: tile + vinyl: + text: vinyl + wood: + text: wood + build_occup_type_enum: + name: build_occup_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + office: + text: office + market: + text: market + restaurant: + text: restaurant + residence: + text: residence + school: + text: school + residential: + text: residential + commercial: + text: commercial + low rise: + text: low rise + high rise: + text: high rise + wood framed: + text: wood framed + health care: + text: health care + airport: + text: airport + sports complex: + text: sports complex + door_comp_type_enum: + name: door_comp_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + metal covered: + text: metal covered + revolving: + text: revolving + sliding: + text: sliding + telescopic: + text: telescopic + drawings_enum: + name: drawings_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + operation: + text: operation + as built: + text: as built + construction: + text: construction + bid: + text: bid + design: + text: design + building navigation map: + text: building navigation map + diagram: + text: diagram + sketch: + text: sketch + train_stat_loc_enum: + name: train_stat_loc_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - cathedral: - text: cathedral - dropped: - text: dropped - concave: - text: concave - barrel-shaped: - text: barrel-shaped - coffered: - text: coffered - cove: - text: cove - stretched: - text: stretched + south station above ground: + text: south station above ground + south station underground: + text: south station underground + south station amtrak: + text: south station amtrak + forest hills: + text: forest hills + riverside: + text: riverside build_docs_enum: name: build_docs_enum from_schema: https://example.com/nmdc_submission_schema @@ -2630,146 +2750,74 @@ enums: text: ventilation system windows: text: windows - room_type_enum: - name: room_type_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - attic: - text: attic - bathroom: - text: bathroom - closet: - text: closet - conference room: - text: conference room - elevator: - text: elevator - examining room: - text: examining room - hallway: - text: hallway - kitchen: - text: kitchen - mail room: - text: mail room - private office: - text: private office - open office: - text: open office - stairwell: - text: stairwell - ',restroom': - text: ',restroom' - lobby: - text: lobby - vestibule: - text: vestibule - mechanical or electrical room: - text: mechanical or electrical room - data center: - text: data center - laboratory_wet: - text: laboratory_wet - laboratory_dry: - text: laboratory_dry - gymnasium: - text: gymnasium - natatorium: - text: natatorium - auditorium: - text: auditorium - lockers: - text: lockers - cafe: - text: cafe - warehouse: - text: warehouse - season_use_enum: - name: season_use_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - Spring: - text: Spring - Summer: - text: Summer - Fall: - text: Fall - Winter: - text: Winter - door_type_metal_enum: - name: door_type_metal_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - collapsible: - text: collapsible - corrugated steel: - text: corrugated steel - hollow: - text: hollow - rolling shutters: - text: rolling shutters - steel plate: - text: steel plate - room_samp_pos_enum: - name: room_samp_pos_enum + ceil_type_enum: + name: ceil_type_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - north corner: - text: north corner - south corner: - text: south corner - west corner: - text: west corner - east corner: - text: east corner - northeast corner: - text: northeast corner - northwest corner: - text: northwest corner - southeast corner: - text: southeast corner - southwest corner: - text: southwest corner - center: - text: center - samp_weather_enum: - name: samp_weather_enum + cathedral: + text: cathedral + dropped: + text: dropped + concave: + text: concave + barrel-shaped: + text: barrel-shaped + coffered: + text: coffered + cove: + text: cove + stretched: + text: stretched + int_wall_cond_enum: + name: int_wall_cond_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - clear sky: - text: clear sky - cloudy: - text: cloudy - foggy: - text: foggy - hail: - text: hail - rain: - text: rain - snow: - text: snow - sleet: - text: sleet - sunny: - text: sunny - windy: - text: windy - gender_restroom_enum: - name: gender_restroom_enum + new: + text: new + visible wear: + text: visible wear + needs repair: + text: needs repair + damaged: + text: damaged + rupture: + text: rupture + depos_env_enum: + name: depos_env_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - all gender: - text: all gender - female: - text: female - gender neurtral: - text: gender neurtral - male: - text: male - male and female: - text: male and female - unisex: - text: unisex + Continental - Alluvial: + text: Continental - Alluvial + Continental - Aeolian: + text: Continental - Aeolian + Continental - Fluvial: + text: Continental - Fluvial + Continental - Lacustrine: + text: Continental - Lacustrine + Transitional - Deltaic: + text: Transitional - Deltaic + Transitional - Tidal: + text: Transitional - Tidal + Transitional - Lagoonal: + text: Transitional - Lagoonal + Transitional - Beach: + text: Transitional - Beach + Transitional - Lake: + text: Transitional - Lake + Marine - Shallow: + text: Marine - Shallow + Marine - Deep: + text: Marine - Deep + Marine - Reef: + text: Marine - Reef + Other - Evaporite: + text: Other - Evaporite + Other - Glacial: + text: Other - Glacial + Other - Volcanic: + text: Other - Volcanic + other: + text: other hc_produced_enum: name: hc_produced_enum from_schema: https://example.com/nmdc_submission_schema @@ -2786,24 +2834,14 @@ enums: text: Coalbed Methane other: text: other - hcr_enum: - name: hcr_enum + oxy_stat_samp_enum: + name: oxy_stat_samp_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - Oil Reservoir: - text: Oil Reservoir - Gas Reservoir: - text: Gas Reservoir - Oil Sand: - text: Oil Sand - Coalbed: - text: Coalbed - Shale: - text: Shale - Tight Oil Reservoir: - text: Tight Oil Reservoir - Tight Gas Reservoir: - text: Tight Gas Reservoir + aerobic: + text: aerobic + anaerobic: + text: anaerobic other: text: other lithology_enum: @@ -2836,70 +2874,6 @@ enums: text: Volcanic other: text: other - samp_collect_point_enum: - name: samp_collect_point_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - well: - text: well - test well: - text: test well - drilling rig: - text: drilling rig - wellhead: - text: wellhead - separator: - text: separator - storage tank: - text: storage tank - other: - text: other - oxy_stat_samp_enum: - name: oxy_stat_samp_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - aerobic: - text: aerobic - anaerobic: - text: anaerobic - other: - text: other - depos_env_enum: - name: depos_env_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - Continental - Alluvial: - text: Continental - Alluvial - Continental - Aeolian: - text: Continental - Aeolian - Continental - Fluvial: - text: Continental - Fluvial - Continental - Lacustrine: - text: Continental - Lacustrine - Transitional - Deltaic: - text: Transitional - Deltaic - Transitional - Tidal: - text: Transitional - Tidal - Transitional - Lagoonal: - text: Transitional - Lagoonal - Transitional - Beach: - text: Transitional - Beach - Transitional - Lake: - text: Transitional - Lake - Marine - Shallow: - text: Marine - Shallow - Marine - Deep: - text: Marine - Deep - Marine - Reef: - text: Marine - Reef - Other - Evaporite: - text: Other - Evaporite - Other - Glacial: - text: Other - Glacial - Other - Volcanic: - text: Other - Volcanic - other: - text: other hcr_geol_age_enum: name: hcr_geol_age_enum from_schema: https://example.com/nmdc_submission_schema @@ -2940,6 +2914,26 @@ enums: text: Triassic other: text: other + hcr_enum: + name: hcr_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + Oil Reservoir: + text: Oil Reservoir + Gas Reservoir: + text: Gas Reservoir + Oil Sand: + text: Oil Sand + Coalbed: + text: Coalbed + Shale: + text: Shale + Tight Oil Reservoir: + text: Tight Oil Reservoir + Tight Gas Reservoir: + text: Tight Gas Reservoir + other: + text: other samp_subtype_enum: name: samp_subtype_enum from_schema: https://example.com/nmdc_submission_schema @@ -2954,6 +2948,38 @@ enums: text: not applicable other: text: other + samp_collect_point_enum: + name: samp_collect_point_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + well: + text: well + test well: + text: test well + drilling rig: + text: drilling rig + wellhead: + text: wellhead + separator: + text: separator + storage tank: + text: storage tank + other: + text: other + sr_dep_env_enum: + name: sr_dep_env_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + Lacustine: + text: Lacustine + Fluvioldeltaic: + text: Fluvioldeltaic + Fluviomarine: + text: Fluviomarine + Marine: + text: Marine + other: + text: other sr_lithology_enum: name: sr_lithology_enum from_schema: https://example.com/nmdc_submission_schema @@ -2982,20 +3008,6 @@ enums: text: Type IV other: text: other - sr_dep_env_enum: - name: sr_dep_env_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - Lacustine: - text: Lacustine - Fluvioldeltaic: - text: Fluvioldeltaic - Fluviomarine: - text: Fluviomarine - Marine: - text: Marine - other: - text: other sr_geol_age_enum: name: sr_geol_age_enum from_schema: https://example.com/nmdc_submission_schema @@ -3036,6 +3048,20 @@ enums: text: Triassic other: text: other + profile_position_enum: + name: profile_position_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + summit: + text: summit + shoulder: + text: shoulder + backslope: + text: backslope + footslope: + text: footslope + toeslope: + text: toeslope biotic_relationship_enum: name: biotic_relationship_enum from_schema: https://example.com/nmdc_submission_schema @@ -3048,62 +3074,64 @@ enums: text: commensal symbiont: text: symbiont - fao_class_enum: - name: fao_class_enum + soil_horizon_enum: + name: soil_horizon_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - Acrisols: - text: Acrisols - Andosols: - text: Andosols - Arenosols: - text: Arenosols - Cambisols: - text: Cambisols - Chernozems: - text: Chernozems - Ferralsols: - text: Ferralsols - Fluvisols: - text: Fluvisols - Gleysols: - text: Gleysols - Greyzems: - text: Greyzems - Gypsisols: - text: Gypsisols - Histosols: - text: Histosols - Kastanozems: - text: Kastanozems - Lithosols: - text: Lithosols - Luvisols: - text: Luvisols - Nitosols: - text: Nitosols - Phaeozems: - text: Phaeozems - Planosols: - text: Planosols - Podzols: - text: Podzols - Podzoluvisols: - text: Podzoluvisols - Rankers: - text: Rankers - Regosols: - text: Regosols - Rendzinas: - text: Rendzinas - Solonchaks: - text: Solonchaks - Solonetz: - text: Solonetz - Vertisols: - text: Vertisols - Yermosols: - text: Yermosols + O horizon: + text: O horizon + A horizon: + text: A horizon + E horizon: + text: E horizon + B horizon: + text: B horizon + C horizon: + text: C horizon + R layer: + text: R layer + Permafrost: + text: Permafrost + M horizon: + text: M horizon + drainage_class_enum: + name: drainage_class_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + very poorly: + text: very poorly + poorly: + text: poorly + somewhat poorly: + text: somewhat poorly + moderately well: + text: moderately well + well: + text: well + excessively drained: + text: excessively drained + tillage_enum: + name: tillage_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + drill: + text: drill + cutting disc: + text: cutting disc + ridge till: + text: ridge till + strip tillage: + text: strip tillage + zonal tillage: + text: zonal tillage + chisel: + text: chisel + tined: + text: tined + mouldboard: + text: mouldboard + disc plough: + text: disc plough cur_land_use_enum: name: cur_land_use_enum from_schema: https://example.com/nmdc_submission_schema @@ -3296,140 +3324,62 @@ enums: value: vine crops (grapes) examples: - value: grapes - soil_horizon_enum: - name: soil_horizon_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - O horizon: - text: O horizon - A horizon: - text: A horizon - E horizon: - text: E horizon - B horizon: - text: B horizon - C horizon: - text: C horizon - R layer: - text: R layer - Permafrost: - text: Permafrost - M horizon: - text: M horizon - profile_position_enum: - name: profile_position_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - summit: - text: summit - shoulder: - text: shoulder - backslope: - text: backslope - footslope: - text: footslope - toeslope: - text: toeslope - tillage_enum: - name: tillage_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - drill: - text: drill - cutting disc: - text: cutting disc - ridge till: - text: ridge till - strip tillage: - text: strip tillage - zonal tillage: - text: zonal tillage - chisel: - text: chisel - tined: - text: tined - mouldboard: - text: mouldboard - disc plough: - text: disc plough - drainage_class_enum: - name: drainage_class_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - very poorly: - text: very poorly - poorly: - text: poorly - somewhat poorly: - text: somewhat poorly - moderately well: - text: moderately well - well: - text: well - excessively drained: - text: excessively drained - samp_capt_status_enum: - name: samp_capt_status_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - active surveillance in response to an outbreak: - text: active surveillance in response to an outbreak - active surveillance not initiated by an outbreak: - text: active surveillance not initiated by an outbreak - farm sample: - text: farm sample - market sample: - text: market sample - other: - text: other - samp_dis_stage_enum: - name: samp_dis_stage_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - dissemination: - text: dissemination - growth and reproduction: - text: growth and reproduction - infection: - text: infection - inoculation: - text: inoculation - penetration: - text: penetration - other: - text: other - biol_stat_enum: - name: biol_stat_enum - from_schema: https://example.com/nmdc_submission_schema - permissible_values: - wild: - text: wild - natural: - text: natural - semi-natural: - text: semi-natural - inbred line: - text: inbred line - breeder's line: - text: breeder's line - hybrid: - text: hybrid - clonal selection: - text: clonal selection - mutant: - text: mutant - growth_habit_enum: - name: growth_habit_enum + fao_class_enum: + name: fao_class_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - erect: - text: erect - semi-erect: - text: semi-erect - spreading: - text: spreading - prostrate: - text: prostrate + Acrisols: + text: Acrisols + Andosols: + text: Andosols + Arenosols: + text: Arenosols + Cambisols: + text: Cambisols + Chernozems: + text: Chernozems + Ferralsols: + text: Ferralsols + Fluvisols: + text: Fluvisols + Gleysols: + text: Gleysols + Greyzems: + text: Greyzems + Gypsisols: + text: Gypsisols + Histosols: + text: Histosols + Kastanozems: + text: Kastanozems + Lithosols: + text: Lithosols + Luvisols: + text: Luvisols + Nitosols: + text: Nitosols + Phaeozems: + text: Phaeozems + Planosols: + text: Planosols + Podzols: + text: Podzols + Podzoluvisols: + text: Podzoluvisols + Rankers: + text: Rankers + Regosols: + text: Regosols + Rendzinas: + text: Rendzinas + Solonchaks: + text: Solonchaks + Solonetz: + text: Solonetz + Vertisols: + text: Vertisols + Yermosols: + text: Yermosols plant_sex_enum: name: plant_sex_enum from_schema: https://example.com/nmdc_submission_schema @@ -3492,18 +3442,68 @@ enums: text: Trioecious Unisexual: text: Unisexual - sediment_type_enum: - name: sediment_type_enum + samp_dis_stage_enum: + name: samp_dis_stage_enum from_schema: https://example.com/nmdc_submission_schema permissible_values: - biogenous: - text: biogenous - cosmogenous: - text: cosmogenous - hydrogenous: - text: hydrogenous - lithogenous: - text: lithogenous + dissemination: + text: dissemination + growth and reproduction: + text: growth and reproduction + infection: + text: infection + inoculation: + text: inoculation + penetration: + text: penetration + other: + text: other + growth_habit_enum: + name: growth_habit_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + erect: + text: erect + semi-erect: + text: semi-erect + spreading: + text: spreading + prostrate: + text: prostrate + samp_capt_status_enum: + name: samp_capt_status_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + active surveillance in response to an outbreak: + text: active surveillance in response to an outbreak + active surveillance not initiated by an outbreak: + text: active surveillance not initiated by an outbreak + farm sample: + text: farm sample + market sample: + text: market sample + other: + text: other + biol_stat_enum: + name: biol_stat_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + wild: + text: wild + natural: + text: natural + semi-natural: + text: semi-natural + inbred line: + text: inbred line + breeder's line: + text: breeder's line + hybrid: + text: hybrid + clonal selection: + text: clonal selection + mutant: + text: mutant tidal_stage_enum: name: tidal_stage_enum from_schema: https://example.com/nmdc_submission_schema @@ -3516,6 +3516,18 @@ enums: text: flood tide high tide: text: high tide + sediment_type_enum: + name: sediment_type_enum + from_schema: https://example.com/nmdc_submission_schema + permissible_values: + biogenous: + text: biogenous + cosmogenous: + text: cosmogenous + hydrogenous: + text: hydrogenous + lithogenous: + text: lithogenous host_sex_enum: name: host_sex_enum from_schema: https://example.com/nmdc_submission_schema @@ -6088,6 +6100,7 @@ slots: - value: '2.02' from_schema: https://example.com/nmdc_submission_schema rank: 7 + is_a: biomaterial_purity string_serialization: '{float}' slot_group: JGI-Metagenomics range: float @@ -6102,6 +6115,7 @@ slots: - value: '2.02' from_schema: https://example.com/nmdc_submission_schema rank: 8 + is_a: biomaterial_purity string_serialization: '{float}' slot_group: JGI-Metagenomics range: float @@ -6114,6 +6128,8 @@ slots: examples: - value: '100' from_schema: https://example.com/nmdc_submission_schema + see_also: + - nmdc:nucleic_acid_concentration rank: 5 string_serialization: '{float}' slot_group: JGI-Metagenomics @@ -6271,7 +6287,7 @@ slots: name: dna_volume title: DNA volume in ul comments: - - Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only. + - Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager examples: - value: '25' from_schema: https://example.com/nmdc_submission_schema @@ -6280,7 +6296,7 @@ slots: slot_group: JGI-Metagenomics range: float recommended: true - minimum_value: 25 + minimum_value: 0 maximum_value: 1000 dnase_rna: name: dnase_rna @@ -10885,7 +10901,7 @@ slots: description: If sending biological replicates, indicate the rep number here. title: replicate number comments: - - This will guide staff in ensuring your samples are block & randomized correctly + - This will guide staff in ensuring your samples are blocked & randomized correctly from_schema: https://example.com/nmdc_submission_schema rank: 6 string_serialization: '{integer}' @@ -10946,6 +10962,7 @@ slots: - value: '2.02' from_schema: https://example.com/nmdc_submission_schema rank: 7 + is_a: biomaterial_purity string_serialization: '{float}' slot_group: JGI-Metatranscriptomics range: float @@ -10960,6 +10977,7 @@ slots: - value: '2.02' from_schema: https://example.com/nmdc_submission_schema rank: 8 + is_a: biomaterial_purity string_serialization: '{float}' slot_group: JGI-Metatranscriptomics range: float @@ -10972,6 +10990,8 @@ slots: examples: - value: '100' from_schema: https://example.com/nmdc_submission_schema + see_also: + - nmdc:nucleic_acid_concentration rank: 5 string_serialization: '{float}' slot_group: JGI-Metatranscriptomics @@ -11117,7 +11137,7 @@ slots: name: rna_volume title: RNA volume in ul comments: - - Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only. + - Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager examples: - value: '25' from_schema: https://example.com/nmdc_submission_schema @@ -11126,7 +11146,7 @@ slots: slot_group: JGI-Metatranscriptomics range: float recommended: true - minimum_value: 25 + minimum_value: 0 maximum_value: 1000 room_air_exch_rate: name: room_air_exch_rate @@ -15094,24 +15114,54 @@ slots: is_a: attribute range: string multivalued: false - gold_path_field: - name: gold_path_field - description: This is a grouping for any of the gold path fields + description: + name: description + description: a human-readable description of a thing from_schema: https://example.com/nmdc_submission_schema - is_a: attribute - abstract: true + slot_uri: dcterms:description range: string multivalued: false - nucleic acid sequence source field: - name: nucleic acid sequence source field + id: + name: id + description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI + notes: + - 'abstracted pattern: prefix:typecode-authshoulder-blade(.version)?(_seqsuffix)?' + - a minimum length of 3 characters is suggested for typecodes, but 1 or 2 characters will be accepted + - typecodes must correspond 1:1 to a class in the NMDC schema. this will be checked via per-class id slot usage assertions + - minting authority shoulders should probably be enumerated and checked in the pattern + examples: + - value: nmdc:mgmag-00-x012.1_7_c1 + description: https://github.com/microbiomedata/nmdc-schema/pull/499#discussion_r1018499248 from_schema: https://example.com/nmdc_submission_schema - abstract: true + identifier: true + range: uriorcurie + required: true alternative_identifiers: name: alternative_identifiers description: A list of alternative identifiers for the entity. from_schema: https://example.com/nmdc_submission_schema + multivalued: true + range: uriorcurie + pattern: ^[a-zA-Z_][a-zA-Z0-9_]*:[a-zA-Z_][a-zA-Z0-9_]*$ + investigation field: + name: investigation field + description: field describing aspect of the investigation/study to which the sample belongs + from_schema: https://example.com/nmdc_submission_schema + abstract: true + name: + name: name + description: A human readable label for an entity + from_schema: https://example.com/nmdc_submission_schema + range: string multivalued: false + gold_path_field: + name: gold_path_field + description: This is a grouping for any of the gold path fields + from_schema: https://example.com/nmdc_submission_schema + is_a: attribute + abstract: true range: string + multivalued: false attribute: name: attribute description: 'A attribute of a biosample. Examples: depth, habitat, material. For NMDC, attributes SHOULD be mapped to terms within a MIxS template' @@ -15128,49 +15178,25 @@ slots: description: field describing environmental aspect of a sample from_schema: https://example.com/nmdc_submission_schema abstract: true - investigation field: - name: investigation field - description: field describing aspect of the investigation/study to which the sample belongs + nucleic acid sequence source field: + name: nucleic acid sequence source field from_schema: https://example.com/nmdc_submission_schema abstract: true - description: - name: description - description: a human-readable description of a thing + core field: + name: core field + description: basic fields from_schema: https://example.com/nmdc_submission_schema - slot_uri: dcterms:description - range: string - multivalued: false + abstract: true language: name: language description: Should use ISO 639-1 code e.g. "en", "fr" from_schema: https://example.com/nmdc_submission_schema range: language code - name: - name: name - description: A human readable label for an entity + biomaterial_purity: + name: biomaterial_purity from_schema: https://example.com/nmdc_submission_schema range: string multivalued: false - core field: - name: core field - description: basic fields - from_schema: https://example.com/nmdc_submission_schema - abstract: true - id: - name: id - description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI - notes: - - 'abstracted pattern: prefix:typecode-authshoulder-blade(.version)?(_seqsuffix)?' - - a minimum length of 3 characters is suggested for typecodes, but 1 or 2 characters will be accepted - - typecodes must correspond 1:1 to a class in the NMDC schema. this will be checked via per-class id slot usage assertions - - minting authority shoulders should probably be enumerated and checked in the pattern - examples: - - value: nmdc:mgmag-00-x012.1_7_c1 - description: https://github.com/microbiomedata/nmdc-schema/pull/499#discussion_r1018499248 - from_schema: https://example.com/nmdc_submission_schema - identifier: true - range: uriorcurie - required: true classes: AirInterface: name: AirInterface @@ -15246,7 +15272,7 @@ classes: title: air particulate matter concentration examples: - value: PM2.5;10 microgram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - air particulate matter concentration rank: 48 @@ -15270,7 +15296,7 @@ classes: title: altitude examples: - value: 100 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - altitude rank: 26 @@ -15300,7 +15326,7 @@ classes: title: barometric pressure examples: - value: 5 millibar - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - barometric pressure rank: 49 @@ -15329,7 +15355,7 @@ classes: title: carbon dioxide examples: - value: 410 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon dioxide rank: 50 @@ -15358,7 +15384,7 @@ classes: title: carbon monoxide examples: - value: 0.1 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon monoxide rank: 51 @@ -15385,7 +15411,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -15415,7 +15441,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -15445,7 +15471,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -15467,7 +15493,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -15487,7 +15513,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -15507,7 +15533,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -15527,7 +15553,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -15550,13 +15576,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -15567,7 +15594,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -15592,7 +15619,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -15613,7 +15640,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -15634,7 +15661,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -15656,7 +15683,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -15679,7 +15706,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -15689,6 +15716,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -15707,7 +15735,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -15736,7 +15764,7 @@ classes: title: humidity examples: - value: 25 gram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - humidity rank: 52 @@ -15756,7 +15784,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -15764,6 +15792,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -15785,7 +15814,7 @@ classes: title: methane examples: - value: 1800 parts per billion - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - methane rank: 24 @@ -15811,7 +15840,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -15841,7 +15870,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -15858,7 +15887,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -15884,7 +15913,7 @@ classes: title: oxygen examples: - value: 600 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - oxygen rank: 53 @@ -15910,7 +15939,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -15939,7 +15968,7 @@ classes: title: pollutants examples: - value: lead;0.15 microgram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pollutants rank: 54 @@ -15969,7 +15998,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -15994,7 +16023,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -16020,7 +16049,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -16044,7 +16073,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -16073,7 +16102,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -16100,7 +16129,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -16126,7 +16155,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -16155,7 +16184,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -16179,7 +16208,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -16200,7 +16229,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -16229,7 +16258,7 @@ classes: title: solar irradiance examples: - value: 1.36 kilowatts per square meter per day - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - solar irradiance rank: 55 @@ -16249,7 +16278,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -16275,7 +16304,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -16304,7 +16333,7 @@ classes: title: ventilation rate examples: - value: 750 cubic meter per minute - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ventilation rate rank: 56 @@ -16330,7 +16359,7 @@ classes: title: ventilation type examples: - value: Operable windows - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ventilation type rank: 57 @@ -16359,7 +16388,7 @@ classes: title: volatile organic compounds examples: - value: formaldehyde;500 nanogram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - volatile organic compounds rank: 58 @@ -16386,7 +16415,7 @@ classes: title: wind direction examples: - value: Northwest - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wind direction rank: 59 @@ -16415,7 +16444,7 @@ classes: title: wind speed examples: - value: 21 kilometer per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wind speed rank: 60 @@ -16538,7 +16567,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -16567,7 +16596,7 @@ classes: title: alkyl diethers examples: - value: 0.005 mole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkyl diethers rank: 2 @@ -16590,7 +16619,7 @@ classes: title: altitude examples: - value: 100 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - altitude rank: 26 @@ -16620,7 +16649,7 @@ classes: title: aminopeptidase activity examples: - value: 0.269 mole per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aminopeptidase activity rank: 3 @@ -16649,7 +16678,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -16678,7 +16707,7 @@ classes: title: bacterial carbon production examples: - value: 2.53 microgram per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bacterial carbon production rank: 5 @@ -16707,7 +16736,7 @@ classes: title: biomass examples: - value: total;20 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biomass rank: 6 @@ -16737,7 +16766,7 @@ classes: title: bishomohopanol examples: - value: 14 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bishomohopanol rank: 7 @@ -16766,7 +16795,7 @@ classes: title: bromide examples: - value: 0.05 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bromide rank: 8 @@ -16795,7 +16824,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -16821,7 +16850,7 @@ classes: title: carbon/nitrogen ratio examples: - value: '0.417361111' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon/nitrogen ratio rank: 44 @@ -16848,7 +16877,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -16879,7 +16908,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -16908,7 +16937,7 @@ classes: title: chlorophyll examples: - value: 5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chlorophyll rank: 11 @@ -16936,7 +16965,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -16966,7 +16995,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -16997,7 +17026,7 @@ classes: title: diether lipids examples: - value: 0.2 nanogram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - diether lipids rank: 13 @@ -17027,7 +17056,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -17056,7 +17085,7 @@ classes: title: dissolved hydrogen examples: - value: 0.3 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved hydrogen rank: 15 @@ -17085,7 +17114,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -17114,7 +17143,7 @@ classes: title: dissolved organic carbon examples: - value: 197 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic carbon rank: 17 @@ -17143,7 +17172,7 @@ classes: title: dissolved organic nitrogen examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic nitrogen rank: 18 @@ -17172,7 +17201,7 @@ classes: title: dissolved oxygen examples: - value: 175 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen rank: 19 @@ -17192,7 +17221,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -17212,7 +17241,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -17232,7 +17261,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -17252,7 +17281,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -17275,13 +17304,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -17292,7 +17322,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -17317,7 +17347,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -17338,7 +17368,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -17359,7 +17389,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -17381,7 +17411,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -17404,7 +17434,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -17414,6 +17444,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -17435,7 +17466,7 @@ classes: title: glucosidase activity examples: - value: 5 mol per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - glucosidase activity rank: 20 @@ -17461,7 +17492,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -17481,7 +17512,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -17489,6 +17520,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -17510,7 +17542,7 @@ classes: title: magnesium examples: - value: 52.8 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - magnesium rank: 21 @@ -17539,7 +17571,7 @@ classes: title: mean friction velocity examples: - value: 0.5 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean friction velocity rank: 22 @@ -17568,7 +17600,7 @@ classes: title: mean peak friction velocity examples: - value: 1 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean peak friction velocity rank: 23 @@ -17597,7 +17629,7 @@ classes: title: methane examples: - value: 1800 parts per billion - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - methane rank: 24 @@ -17623,7 +17655,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -17653,7 +17685,7 @@ classes: title: n-alkanes examples: - value: n-hexadecane;100 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - n-alkanes rank: 25 @@ -17683,7 +17715,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -17712,7 +17744,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -17741,7 +17773,7 @@ classes: title: nitrogen examples: - value: 4.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrogen rank: 28 @@ -17770,7 +17802,7 @@ classes: title: organic carbon examples: - value: 1.5 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic carbon rank: 29 @@ -17799,7 +17831,7 @@ classes: title: organic matter examples: - value: 1.75 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic matter rank: 45 @@ -17828,7 +17860,7 @@ classes: title: organic nitrogen examples: - value: 4 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic nitrogen rank: 46 @@ -17857,7 +17889,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -17874,7 +17906,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -17900,7 +17932,7 @@ classes: title: particulate organic carbon examples: - value: 1.92 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - particulate organic carbon rank: 31 @@ -17926,7 +17958,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -17955,7 +17987,7 @@ classes: title: petroleum hydrocarbon examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - petroleum hydrocarbon rank: 34 @@ -17983,7 +18015,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -18008,7 +18040,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -18035,7 +18067,7 @@ classes: title: phaeopigments examples: - value: 2.5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phaeopigments rank: 35 @@ -18065,7 +18097,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -18094,7 +18126,7 @@ classes: title: phospholipid fatty acid examples: - value: 2.98 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phospholipid fatty acid rank: 36 @@ -18124,7 +18156,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -18153,7 +18185,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -18182,7 +18214,7 @@ classes: title: redox potential examples: - value: 300 millivolt - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - redox potential rank: 40 @@ -18211,7 +18243,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -18236,7 +18268,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -18262,7 +18294,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -18286,7 +18318,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -18315,7 +18347,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -18342,7 +18374,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -18368,7 +18400,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -18397,7 +18429,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -18421,7 +18453,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -18448,7 +18480,7 @@ classes: title: silicate examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - silicate rank: 43 @@ -18471,7 +18503,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -18500,7 +18532,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -18520,7 +18552,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -18549,7 +18581,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -18578,7 +18610,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -18604,7 +18636,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -18628,7 +18660,7 @@ classes: - ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format examples: - value: 1 ug/L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 47 is_a: core field slot_uri: MIXS:0000525 @@ -18645,7 +18677,7 @@ classes: title: total nitrogen content examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 48 is_a: core field slot_uri: MIXS:0000530 @@ -18665,7 +18697,7 @@ classes: - check description. How are they different? examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 50 is_a: core field slot_uri: MIXS:0000533 @@ -18692,7 +18724,7 @@ classes: title: turbidity examples: - value: 0.3 nephelometric turbidity units - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - turbidity rank: 47 @@ -18732,7 +18764,7 @@ classes: - value: 75% water holding capacity - value: 1.1 g fresh weight/ dry weight - value: 10% water filled pore space - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 39 is_a: core field string_serialization: '{float or pct} {unit}' @@ -18951,7 +18983,7 @@ classes: title: absolute air humidity examples: - value: 9 gram per gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - absolute air humidity rank: 61 @@ -18977,7 +19009,7 @@ classes: title: address examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - address rank: 62 @@ -19003,7 +19035,7 @@ classes: title: adjacent rooms examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - adjacent rooms rank: 63 @@ -19029,7 +19061,7 @@ classes: title: aerospace structure examples: - value: plane - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aerospace structure rank: 64 @@ -19058,7 +19090,7 @@ classes: title: air temperature examples: - value: 20 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - air temperature rank: 65 @@ -19081,7 +19113,7 @@ classes: title: altitude examples: - value: 100 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - altitude rank: 26 @@ -19111,7 +19143,7 @@ classes: title: amount of light examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount of light rank: 66 @@ -19137,7 +19169,7 @@ classes: title: architectural structure examples: - value: shed - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - architectural structure rank: 67 @@ -19165,7 +19197,7 @@ classes: title: average dew point examples: - value: 25.5 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - average dew point rank: 68 @@ -19191,7 +19223,7 @@ classes: title: average daily occupancy examples: - value: '2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - average daily occupancy rank: 69 @@ -19219,7 +19251,7 @@ classes: title: average temperature examples: - value: 12.5 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - average temperature rank: 70 @@ -19245,7 +19277,7 @@ classes: title: bathroom count examples: - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bathroom count rank: 71 @@ -19270,7 +19302,7 @@ classes: title: bedroom count examples: - value: '2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bedroom count rank: 72 @@ -19295,7 +19327,7 @@ classes: title: design, construction, and operation documents examples: - value: maintenance plans - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - design, construction, and operation documents rank: 73 @@ -19320,7 +19352,7 @@ classes: title: building occupancy type examples: - value: market - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - building occupancy type rank: 74 @@ -19345,7 +19377,7 @@ classes: title: building setting examples: - value: rural - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - building setting rank: 75 @@ -19373,7 +19405,7 @@ classes: title: built structure age examples: - value: '15' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - built structure age rank: 76 @@ -19399,7 +19431,7 @@ classes: title: built structure setting examples: - value: rural - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - built structure setting rank: 77 @@ -19425,7 +19457,7 @@ classes: title: built structure type examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - built structure type rank: 78 @@ -19454,7 +19486,7 @@ classes: title: carbon dioxide examples: - value: 410 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon dioxide rank: 50 @@ -19483,7 +19515,7 @@ classes: title: ceiling area examples: - value: 25 square meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling area rank: 79 @@ -19509,7 +19541,7 @@ classes: title: ceiling condition examples: - value: damaged - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling condition rank: 80 @@ -19534,7 +19566,7 @@ classes: title: ceiling finish material examples: - value: stucco - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling finish material rank: 81 @@ -19559,7 +19591,7 @@ classes: title: ceiling structure examples: - value: concrete - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling structure rank: 82 @@ -19585,7 +19617,7 @@ classes: title: ceiling texture examples: - value: popcorn - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling texture rank: 83 @@ -19613,7 +19645,7 @@ classes: title: ceiling thermal mass examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling thermal mass rank: 84 @@ -19639,7 +19671,7 @@ classes: title: ceiling type examples: - value: coffered - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling type rank: 85 @@ -19664,7 +19696,7 @@ classes: title: ceiling signs of water/mold examples: - value: presence of mold visible - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ceiling signs of water/mold rank: 86 @@ -19692,7 +19724,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -19720,7 +19752,7 @@ classes: title: cooling system identifier examples: - value: '12345' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - cooling system identifier rank: 87 @@ -19745,7 +19777,7 @@ classes: title: date last rain examples: - value: 2018-05-11:T14:30Z - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - date last rain rank: 88 @@ -19772,7 +19804,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -19803,7 +19835,7 @@ classes: title: dew point examples: - value: 22 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dew point rank: 89 @@ -19829,7 +19861,7 @@ classes: title: door type, composite examples: - value: revolving - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door type, composite rank: 90 @@ -19854,7 +19886,7 @@ classes: title: door condition examples: - value: new - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door condition rank: 91 @@ -19879,7 +19911,7 @@ classes: title: door direction of opening examples: - value: inward - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door direction of opening rank: 92 @@ -19904,7 +19936,7 @@ classes: title: door location examples: - value: north - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door location rank: 93 @@ -19929,7 +19961,7 @@ classes: title: door material examples: - value: wood - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door material rank: 94 @@ -19954,7 +19986,7 @@ classes: title: door movement examples: - value: swinging - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door movement rank: 95 @@ -19982,7 +20014,7 @@ classes: title: door area or size examples: - value: 2.5 square meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door area or size rank: 96 @@ -20008,7 +20040,7 @@ classes: title: door type examples: - value: wooden - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door type rank: 97 @@ -20033,7 +20065,7 @@ classes: title: door type, metal examples: - value: hollow - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door type, metal rank: 98 @@ -20058,7 +20090,7 @@ classes: title: door type, wood examples: - value: battened - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door type, wood rank: 99 @@ -20083,7 +20115,7 @@ classes: title: door signs of water/mold examples: - value: presence of mold visible - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - door signs of water/mold rank: 100 @@ -20109,7 +20141,7 @@ classes: title: drawings examples: - value: sketch - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - drawings rank: 101 @@ -20128,7 +20160,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -20148,7 +20180,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -20168,7 +20200,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -20188,7 +20220,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -20211,13 +20243,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -20235,7 +20268,7 @@ classes: title: elevator count examples: - value: '2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - elevator count rank: 102 @@ -20253,7 +20286,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -20278,7 +20311,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -20299,7 +20332,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -20320,7 +20353,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -20345,7 +20378,7 @@ classes: title: escalator count examples: - value: '4' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - escalator count rank: 103 @@ -20373,7 +20406,7 @@ classes: title: exposed ductwork examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - exposed ductwork rank: 104 @@ -20399,7 +20432,7 @@ classes: title: exposed pipes examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - exposed pipes rank: 105 @@ -20422,7 +20455,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -20448,7 +20481,7 @@ classes: title: exterior door count examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - exterior door count rank: 106 @@ -20473,7 +20506,7 @@ classes: title: orientations of exterior wall examples: - value: northwest - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - orientations of exterior wall rank: 107 @@ -20498,7 +20531,7 @@ classes: title: orientations of exterior window examples: - value: southwest - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - orientations of exterior window rank: 108 @@ -20523,7 +20556,7 @@ classes: title: filter type examples: - value: HEPA - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - filter type rank: 109 @@ -20548,7 +20581,7 @@ classes: title: fireplace type examples: - value: wood burning - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - fireplace type rank: 110 @@ -20577,7 +20610,7 @@ classes: title: floor age examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor age rank: 111 @@ -20606,7 +20639,7 @@ classes: title: floor area examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor area rank: 112 @@ -20632,7 +20665,7 @@ classes: title: floor condition examples: - value: new - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor condition rank: 113 @@ -20657,7 +20690,7 @@ classes: title: floor count examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor count rank: 114 @@ -20682,7 +20715,7 @@ classes: title: floor finish material examples: - value: carpet - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor finish material rank: 115 @@ -20707,7 +20740,7 @@ classes: title: floor structure examples: - value: concrete - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor structure rank: 116 @@ -20735,7 +20768,7 @@ classes: title: floor thermal mass examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor thermal mass rank: 117 @@ -20761,7 +20794,7 @@ classes: title: floor signs of water/mold examples: - value: ceiling discoloration - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - floor signs of water/mold rank: 118 @@ -20786,7 +20819,7 @@ classes: title: frequency of cleaning examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - frequency of cleaning rank: 119 @@ -20812,7 +20845,7 @@ classes: title: frequency of cooking examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - frequency of cooking rank: 120 @@ -20838,7 +20871,7 @@ classes: title: furniture examples: - value: chair - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - furniture rank: 121 @@ -20863,7 +20896,7 @@ classes: title: gender of restroom examples: - value: male - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - gender of restroom rank: 122 @@ -20885,7 +20918,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -20895,6 +20928,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -20913,7 +20947,7 @@ classes: title: hallway/corridor count examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hallway/corridor count rank: 123 @@ -20938,7 +20972,7 @@ classes: title: handidness examples: - value: right handedness - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - handidness rank: 124 @@ -20963,7 +20997,7 @@ classes: title: heating and cooling system type examples: - value: heat pump - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - heating and cooling system type rank: 125 @@ -20988,7 +21022,7 @@ classes: title: heating delivery locations examples: - value: north - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - heating delivery locations rank: 126 @@ -21013,7 +21047,7 @@ classes: title: heating system delivery method examples: - value: radiant - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - heating system delivery method rank: 127 @@ -21039,7 +21073,7 @@ classes: title: heating system identifier examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - heating system identifier rank: 128 @@ -21067,7 +21101,7 @@ classes: title: height carpet fiber mat examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - height carpet fiber mat rank: 129 @@ -21093,7 +21127,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -21119,7 +21153,7 @@ classes: title: indoor space examples: - value: foyer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - indoor space rank: 130 @@ -21144,7 +21178,7 @@ classes: title: indoor surface examples: - value: wall - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - indoor surface rank: 131 @@ -21172,7 +21206,7 @@ classes: title: inside lux light examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - inside lux light rank: 132 @@ -21198,7 +21232,7 @@ classes: title: interior wall condition examples: - value: damaged - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - interior wall condition rank: 133 @@ -21223,7 +21257,7 @@ classes: title: last time swept/mopped/vacuumed examples: - value: 2018-05-11:T14:30Z - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - last time swept/mopped/vacuumed rank: 134 @@ -21242,7 +21276,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -21250,6 +21284,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -21268,7 +21303,7 @@ classes: title: light type examples: - value: desk lamp - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - light type rank: 135 @@ -21293,7 +21328,7 @@ classes: title: maximum occupancy examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - maximum occupancy rank: 136 @@ -21319,7 +21354,7 @@ classes: title: mechanical structure examples: - value: elevator - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mechanical structure rank: 137 @@ -21344,7 +21379,7 @@ classes: title: number of pets examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - number of pets rank: 138 @@ -21370,7 +21405,7 @@ classes: title: number of houseplants examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - number of houseplants rank: 139 @@ -21396,7 +21431,7 @@ classes: title: number of residents examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - number of residents rank: 140 @@ -21422,7 +21457,7 @@ classes: title: occupant density at sampling examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - occupant density at sampling rank: 141 @@ -21448,7 +21483,7 @@ classes: title: occupancy documentation examples: - value: estimate - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - occupancy documentation rank: 142 @@ -21473,7 +21508,7 @@ classes: title: occupancy at sampling examples: - value: '10' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - occupancy at sampling rank: 143 @@ -21502,7 +21537,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -21528,7 +21563,7 @@ classes: title: presence of pets, animals, or insects examples: - value: cat;5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - presence of pets, animals, or insects rank: 144 @@ -21554,7 +21589,7 @@ classes: title: quadrant position examples: - value: West side - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - quadrant position rank: 145 @@ -21582,7 +21617,7 @@ classes: title: relative air humidity examples: - value: 80% - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - relative air humidity rank: 146 @@ -21611,7 +21646,7 @@ classes: title: outside relative humidity examples: - value: 12 per kilogram of air - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - outside relative humidity rank: 147 @@ -21637,7 +21672,7 @@ classes: title: relative sampling location examples: - value: center of car - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - relative sampling location rank: 148 @@ -21665,7 +21700,7 @@ classes: title: room air exchange rate examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room air exchange rate rank: 149 @@ -21691,7 +21726,7 @@ classes: title: room architectural elements examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room architectural elements rank: 150 @@ -21717,7 +21752,7 @@ classes: title: room condition examples: - value: new - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room condition rank: 151 @@ -21742,7 +21777,7 @@ classes: title: rooms connected by a doorway examples: - value: office - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooms connected by a doorway rank: 152 @@ -21767,7 +21802,7 @@ classes: title: room count examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room count rank: 153 @@ -21795,7 +21830,7 @@ classes: title: room dimensions examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room dimensions rank: 154 @@ -21824,7 +21859,7 @@ classes: title: room door distance examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room door distance rank: 155 @@ -21850,7 +21885,7 @@ classes: title: rooms that share a door with sampling room examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooms that share a door with sampling room rank: 156 @@ -21876,7 +21911,7 @@ classes: title: rooms that are on the same hallway examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooms that are on the same hallway rank: 157 @@ -21902,7 +21937,7 @@ classes: title: room location in building examples: - value: interior room - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room location in building rank: 158 @@ -21927,7 +21962,7 @@ classes: title: room moisture damage or mold history examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room moisture damage or mold history rank: 159 @@ -21955,7 +21990,7 @@ classes: title: room net area examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room net area rank: 160 @@ -21981,7 +22016,7 @@ classes: title: room occupancy examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room occupancy rank: 161 @@ -22007,7 +22042,7 @@ classes: title: room sampling position examples: - value: south corner - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room sampling position rank: 162 @@ -22032,7 +22067,7 @@ classes: title: room type examples: - value: bathroom - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room type rank: 163 @@ -22060,7 +22095,7 @@ classes: title: room volume examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room volume rank: 164 @@ -22086,7 +22121,7 @@ classes: title: rooms that share a wall with sampling room examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooms that share a wall with sampling room rank: 165 @@ -22112,7 +22147,7 @@ classes: title: room window count examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - room window count rank: 166 @@ -22137,7 +22172,7 @@ classes: title: sampling floor examples: - value: 4th floor - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sampling floor rank: 167 @@ -22162,7 +22197,7 @@ classes: title: sampling room ID or name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sampling room ID or name rank: 168 @@ -22187,7 +22222,7 @@ classes: title: sample size sorting method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample size sorting method rank: 169 @@ -22216,7 +22251,7 @@ classes: title: sampling time outside examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sampling time outside rank: 170 @@ -22241,7 +22276,7 @@ classes: title: sampling day weather examples: - value: foggy - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sampling day weather rank: 171 @@ -22263,7 +22298,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -22287,7 +22322,7 @@ classes: title: season examples: - value: autumn [NCIT:C94733] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - season rank: 172 @@ -22314,7 +22349,7 @@ classes: title: seasonal use examples: - value: Winter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - seasonal use rank: 173 @@ -22339,7 +22374,7 @@ classes: title: shading device signs of water/mold examples: - value: no presence of mold visible - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - shading device signs of water/mold rank: 174 @@ -22365,7 +22400,7 @@ classes: title: shading device condition examples: - value: new - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - shading device condition rank: 175 @@ -22390,7 +22425,7 @@ classes: title: shading device location examples: - value: exterior - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - shading device location rank: 176 @@ -22416,7 +22451,7 @@ classes: title: shading device material examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - shading device material rank: 177 @@ -22442,7 +22477,7 @@ classes: title: shading device type examples: - value: slatted aluminum awning - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - shading device type rank: 178 @@ -22464,7 +22499,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -22490,7 +22525,7 @@ classes: title: space typical state examples: - value: typically occupied - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - space typical state rank: 179 @@ -22516,7 +22551,7 @@ classes: title: specifications examples: - value: construction - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - specifications rank: 180 @@ -22535,7 +22570,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -22564,7 +22599,7 @@ classes: title: specific humidity examples: - value: 15 per kilogram of air - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - specific humidity rank: 181 @@ -22590,7 +22625,7 @@ classes: title: substructure type examples: - value: basement - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - substructure type rank: 182 @@ -22615,7 +22650,7 @@ classes: title: surface-air contaminant examples: - value: radon - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface-air contaminant rank: 183 @@ -22643,7 +22678,7 @@ classes: title: surface humidity examples: - value: 10% - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface humidity rank: 184 @@ -22669,7 +22704,7 @@ classes: title: surface material examples: - value: wood - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface material rank: 185 @@ -22697,7 +22732,7 @@ classes: title: surface moisture examples: - value: 0.01 gram per square meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface moisture rank: 186 @@ -22723,7 +22758,7 @@ classes: title: surface moisture pH examples: - value: '7' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface moisture pH rank: 187 @@ -22751,7 +22786,7 @@ classes: title: surface temperature examples: - value: 15 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - surface temperature rank: 188 @@ -22777,7 +22812,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -22806,7 +22841,7 @@ classes: title: temperature outside house examples: - value: 5 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature outside house rank: 189 @@ -22832,7 +22867,7 @@ classes: title: train line examples: - value: red - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - train line rank: 190 @@ -22857,7 +22892,7 @@ classes: title: train station collection location examples: - value: forest hills - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - train station collection location rank: 191 @@ -22882,7 +22917,7 @@ classes: title: train stop collection location examples: - value: end - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - train stop collection location rank: 192 @@ -22907,7 +22942,7 @@ classes: title: typical occupant density examples: - value: '25' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - typical occupant density rank: 193 @@ -22932,7 +22967,7 @@ classes: title: ventilation type examples: - value: Operable windows - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ventilation type rank: 57 @@ -22958,7 +22993,7 @@ classes: title: visual media examples: - value: 3D scans - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - visual media rank: 194 @@ -22986,7 +23021,7 @@ classes: title: wall area examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall area rank: 195 @@ -23012,7 +23047,7 @@ classes: title: wall construction type examples: - value: fire resistive - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall construction type rank: 196 @@ -23037,7 +23072,7 @@ classes: title: wall finish material examples: - value: wood - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall finish material rank: 197 @@ -23065,7 +23100,7 @@ classes: title: wall height examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall height rank: 198 @@ -23091,7 +23126,7 @@ classes: title: wall location examples: - value: north - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall location rank: 199 @@ -23116,7 +23151,7 @@ classes: title: wall surface treatment examples: - value: paneling - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall surface treatment rank: 200 @@ -23141,7 +23176,7 @@ classes: title: wall texture examples: - value: popcorn - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall texture rank: 201 @@ -23169,7 +23204,7 @@ classes: title: wall thermal mass examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall thermal mass rank: 202 @@ -23195,7 +23230,7 @@ classes: title: wall signs of water/mold examples: - value: no presence of mold visible - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wall signs of water/mold rank: 203 @@ -23224,7 +23259,7 @@ classes: title: water feature size examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water feature size rank: 204 @@ -23250,7 +23285,7 @@ classes: title: water feature type examples: - value: stream - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water feature type rank: 205 @@ -23275,7 +23310,7 @@ classes: title: weekday examples: - value: Sunday - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - weekday rank: 206 @@ -23300,7 +23335,7 @@ classes: title: window condition examples: - value: rupture - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window condition rank: 207 @@ -23325,7 +23360,7 @@ classes: title: window covering examples: - value: curtains - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window covering rank: 208 @@ -23350,7 +23385,7 @@ classes: title: window horizontal position examples: - value: middle - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window horizontal position rank: 209 @@ -23375,7 +23410,7 @@ classes: title: window location examples: - value: west - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window location rank: 210 @@ -23400,7 +23435,7 @@ classes: title: window material examples: - value: wood - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window material rank: 211 @@ -23425,7 +23460,7 @@ classes: title: window open frequency examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window open frequency rank: 212 @@ -23453,7 +23488,7 @@ classes: title: window area/size examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window area/size rank: 213 @@ -23479,7 +23514,7 @@ classes: title: window status examples: - value: open - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window status rank: 214 @@ -23505,7 +23540,7 @@ classes: title: window type examples: - value: fixed window - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window type rank: 215 @@ -23530,7 +23565,7 @@ classes: title: window vertical position examples: - value: middle - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window vertical position rank: 216 @@ -23555,7 +23590,7 @@ classes: title: window signs of water/mold examples: - value: no presence of mold visible - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - window signs of water/mold rank: 217 @@ -23603,7 +23638,7 @@ classes: - Enter a temperature in celsius. Numeric portion only. examples: - value: '-80' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 4 string_serialization: '{float}' owner: Biosample @@ -23615,7 +23650,7 @@ classes: name: project_id description: Proposal IDs or names associated with dataset title: project ID - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 1 string_serialization: '{text}' owner: Biosample @@ -23631,8 +23666,8 @@ classes: description: If sending biological replicates, indicate the rep number here. title: replicate number comments: - - This will guide staff in ensuring your samples are block & randomized correctly - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + - This will guide staff in ensuring your samples are blocked & randomized correctly + from_schema: https://w3id.org/nmdc/nmdc rank: 6 string_serialization: '{integer}' owner: Biosample @@ -23651,7 +23686,7 @@ classes: - value: 15 g - value: 100 uL - value: 5 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 3 string_serialization: '{float} {unit}' owner: Biosample @@ -23671,7 +23706,7 @@ classes: - This can vary from 'environmental package' if the sample is an extraction. examples: - value: water extracted soil - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 2 owner: Biosample domain_of: @@ -23688,7 +23723,7 @@ classes: - This field is only required when completing metadata for samples being submitted to EMSL for analyses. examples: - value: '2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{integer}' owner: Biosample @@ -23825,7 +23860,7 @@ classes: title: additional info examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - additional info rank: 290 @@ -23854,7 +23889,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -23880,7 +23915,7 @@ classes: title: alkalinity method examples: - value: titration - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity method rank: 218 @@ -23909,7 +23944,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -23938,7 +23973,7 @@ classes: title: API gravity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - API gravity rank: 291 @@ -23967,7 +24002,7 @@ classes: title: aromatics wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aromatics wt% rank: 292 @@ -23997,7 +24032,7 @@ classes: title: asphaltenes wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - asphaltenes wt% rank: 293 @@ -24024,7 +24059,7 @@ classes: title: basin name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - basin name rank: 294 @@ -24053,7 +24088,7 @@ classes: title: benzene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - benzene rank: 295 @@ -24082,7 +24117,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -24109,7 +24144,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -24140,7 +24175,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -24168,7 +24203,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -24199,7 +24234,7 @@ classes: title: density examples: - value: 1000 kilogram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - density rank: 12 @@ -24225,7 +24260,7 @@ classes: title: depositional environment examples: - value: Continental - Alluvial - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depositional environment rank: 304 @@ -24252,7 +24287,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -24283,7 +24318,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -24312,7 +24347,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -24341,7 +24376,7 @@ classes: title: dissolved inorganic phosphorus examples: - value: 56.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic phosphorus rank: 224 @@ -24370,7 +24405,7 @@ classes: title: dissolved iron examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved iron rank: 305 @@ -24399,7 +24434,7 @@ classes: title: dissolved organic carbon examples: - value: 197 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic carbon rank: 17 @@ -24428,7 +24463,7 @@ classes: title: dissolved oxygen in fluids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen in fluids rank: 306 @@ -24448,7 +24483,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -24468,7 +24503,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -24488,7 +24523,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -24508,7 +24543,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -24531,13 +24566,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -24548,7 +24584,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -24573,7 +24609,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -24594,7 +24630,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -24615,7 +24651,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -24643,7 +24679,7 @@ classes: title: ethylbenzene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ethylbenzene rank: 309 @@ -24666,7 +24702,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -24692,7 +24728,7 @@ classes: title: field name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - field name rank: 310 @@ -24715,7 +24751,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -24725,6 +24761,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -24743,7 +24780,7 @@ classes: title: hydrocarbon type produced examples: - value: Gas - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon type produced rank: 313 @@ -24768,7 +24805,7 @@ classes: title: hydrocarbon resource type examples: - value: Oil Sand - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource type rank: 314 @@ -24796,7 +24833,7 @@ classes: title: formation water salinity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - formation water salinity rank: 315 @@ -24822,7 +24859,7 @@ classes: title: hydrocarbon resource geological age examples: - value: Silurian - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource geological age rank: 316 @@ -24850,7 +24887,7 @@ classes: title: hydrocarbon resource original pressure examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource original pressure rank: 317 @@ -24879,7 +24916,7 @@ classes: title: hydrocarbon resource original temperature examples: - value: 150-295 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource original temperature rank: 318 @@ -24905,7 +24942,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -24925,7 +24962,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -24933,6 +24970,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -24951,7 +24989,7 @@ classes: title: lithology examples: - value: Volcanic - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - lithology rank: 336 @@ -24979,7 +25017,7 @@ classes: title: magnesium examples: - value: 52.8 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - magnesium rank: 21 @@ -25005,7 +25043,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -25035,7 +25073,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -25064,7 +25102,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -25093,7 +25131,7 @@ classes: title: organism count qPCR information examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count qPCR information rank: 337 @@ -25122,7 +25160,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -25151,7 +25189,7 @@ classes: title: oil water contact depth examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - oil water contact depth rank: 339 @@ -25168,7 +25206,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -25194,7 +25232,7 @@ classes: title: permeability examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - permeability rank: 340 @@ -25222,7 +25260,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -25247,7 +25285,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -25274,7 +25312,7 @@ classes: title: porosity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - porosity rank: 37 @@ -25303,7 +25341,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -25332,7 +25370,7 @@ classes: title: pour point examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pour point rank: 341 @@ -25361,7 +25399,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -25387,7 +25425,7 @@ classes: title: reservoir name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - reservoir name rank: 347 @@ -25416,7 +25454,7 @@ classes: title: resins wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - resins wt% rank: 348 @@ -25446,7 +25484,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -25471,7 +25509,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -25497,7 +25535,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -25521,7 +25559,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -25550,7 +25588,7 @@ classes: title: sample measured depth examples: - value: 1534 meter;MSL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample measured depth rank: 351 @@ -25579,7 +25617,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -25606,7 +25644,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -25632,7 +25670,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -25661,7 +25699,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -25688,7 +25726,7 @@ classes: title: sample subtype examples: - value: biofilm - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample subtype rank: 354 @@ -25716,7 +25754,7 @@ classes: title: sample transport conditions examples: - value: 5 days;-20 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample transport conditions rank: 355 @@ -25745,7 +25783,7 @@ classes: title: sample true vertical depth subsea examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample true vertical depth subsea rank: 356 @@ -25771,7 +25809,7 @@ classes: title: sample type examples: - value: built environment sample [GENEPIO:0001248] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample type rank: 357 @@ -25798,7 +25836,7 @@ classes: title: sample well name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample well name rank: 358 @@ -25821,7 +25859,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -25848,7 +25886,7 @@ classes: title: saturates wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - saturates wt% rank: 359 @@ -25872,7 +25910,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -25901,7 +25939,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -25921,7 +25959,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -25947,7 +25985,7 @@ classes: title: source rock depositional environment examples: - value: Marine - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - source rock depositional environment rank: 366 @@ -25972,7 +26010,7 @@ classes: title: source rock geological age examples: - value: Silurian - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - source rock geological age rank: 367 @@ -25997,7 +26035,7 @@ classes: title: source rock kerogen type examples: - value: Type IV - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - source rock kerogen type rank: 368 @@ -26022,7 +26060,7 @@ classes: title: source rock lithology examples: - value: Coal - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - source rock lithology rank: 369 @@ -26050,7 +26088,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -26079,7 +26117,7 @@ classes: title: sulfate in formation water examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate in formation water rank: 370 @@ -26108,7 +26146,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -26137,7 +26175,7 @@ classes: title: suspended solids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - suspended solids rank: 372 @@ -26167,7 +26205,7 @@ classes: title: total acid number examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total acid number rank: 373 @@ -26193,7 +26231,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -26222,7 +26260,7 @@ classes: title: toluene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - toluene rank: 375 @@ -26251,7 +26289,7 @@ classes: title: total iron examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total iron rank: 376 @@ -26280,7 +26318,7 @@ classes: title: total nitrogen concentration examples: - value: 50 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total nitrogen concentration rank: 377 @@ -26309,7 +26347,7 @@ classes: title: total phosphorus examples: - value: 0.03 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total phosphorus rank: 52 @@ -26338,7 +26376,7 @@ classes: title: total sulfur examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total sulfur rank: 379 @@ -26367,7 +26405,7 @@ classes: title: depth (TVDSS) of hydrocarbon resource pressure examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth (TVDSS) of hydrocarbon resource pressure rank: 380 @@ -26396,7 +26434,7 @@ classes: title: depth (TVDSS) of hydrocarbon resource temperature examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth (TVDSS) of hydrocarbon resource temperature rank: 381 @@ -26425,7 +26463,7 @@ classes: title: volatile fatty acids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - volatile fatty acids rank: 382 @@ -26454,7 +26492,7 @@ classes: title: vfa in formation water examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - vfa in formation water rank: 383 @@ -26483,7 +26521,7 @@ classes: title: viscosity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - viscosity rank: 384 @@ -26509,7 +26547,7 @@ classes: title: well identification number examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - well identification number rank: 388 @@ -26538,7 +26576,7 @@ classes: title: xylene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - xylene rank: 389 @@ -26681,7 +26719,7 @@ classes: title: secondary and tertiary recovery methods and start date examples: - value: Polymer Addition;2018-06-21T14:30Z - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - secondary and tertiary recovery methods and start date rank: 289 @@ -26706,7 +26744,7 @@ classes: title: additional info examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - additional info rank: 290 @@ -26735,7 +26773,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -26761,7 +26799,7 @@ classes: title: alkalinity method examples: - value: titration - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity method rank: 218 @@ -26790,7 +26828,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -26819,7 +26857,7 @@ classes: title: API gravity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - API gravity rank: 291 @@ -26848,7 +26886,7 @@ classes: title: aromatics wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aromatics wt% rank: 292 @@ -26878,7 +26916,7 @@ classes: title: asphaltenes wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - asphaltenes wt% rank: 293 @@ -26905,7 +26943,7 @@ classes: title: basin name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - basin name rank: 294 @@ -26934,7 +26972,7 @@ classes: title: benzene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - benzene rank: 295 @@ -26960,7 +26998,7 @@ classes: title: biocide administration examples: - value: ALPHA 1427;Baker Hughes;2008-01-23 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biocide administration rank: 297 @@ -26989,7 +27027,7 @@ classes: title: biocide administration method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biocide administration method rank: 298 @@ -27018,7 +27056,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -27045,7 +27083,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -27076,7 +27114,7 @@ classes: title: chemical treatment method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical treatment method rank: 302 @@ -27102,7 +27140,7 @@ classes: title: chemical treatment examples: - value: ACCENT 1125;DOW;2010-11-17 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical treatment rank: 303 @@ -27131,7 +27169,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -27159,7 +27197,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -27190,7 +27228,7 @@ classes: title: density examples: - value: 1000 kilogram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - density rank: 12 @@ -27216,7 +27254,7 @@ classes: title: depositional environment examples: - value: Continental - Alluvial - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depositional environment rank: 304 @@ -27243,7 +27281,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -27274,7 +27312,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -27303,7 +27341,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -27332,7 +27370,7 @@ classes: title: dissolved inorganic phosphorus examples: - value: 56.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic phosphorus rank: 224 @@ -27361,7 +27399,7 @@ classes: title: dissolved iron examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved iron rank: 305 @@ -27390,7 +27428,7 @@ classes: title: dissolved organic carbon examples: - value: 197 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic carbon rank: 17 @@ -27419,7 +27457,7 @@ classes: title: dissolved oxygen in fluids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen in fluids rank: 306 @@ -27439,7 +27477,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -27459,7 +27497,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -27479,7 +27517,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -27499,7 +27537,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -27522,13 +27560,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -27539,7 +27578,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -27564,7 +27603,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -27585,7 +27624,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -27606,7 +27645,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -27634,7 +27673,7 @@ classes: title: ethylbenzene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ethylbenzene rank: 309 @@ -27657,7 +27696,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -27683,7 +27722,7 @@ classes: title: field name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - field name rank: 310 @@ -27706,7 +27745,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -27716,6 +27755,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -27734,7 +27774,7 @@ classes: title: hydrocarbon type produced examples: - value: Gas - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon type produced rank: 313 @@ -27759,7 +27799,7 @@ classes: title: hydrocarbon resource type examples: - value: Oil Sand - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource type rank: 314 @@ -27787,7 +27827,7 @@ classes: title: formation water salinity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - formation water salinity rank: 315 @@ -27813,7 +27853,7 @@ classes: title: hydrocarbon resource geological age examples: - value: Silurian - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource geological age rank: 316 @@ -27841,7 +27881,7 @@ classes: title: hydrocarbon resource original pressure examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource original pressure rank: 317 @@ -27870,7 +27910,7 @@ classes: title: hydrocarbon resource original temperature examples: - value: 150-295 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - hydrocarbon resource original temperature rank: 318 @@ -27896,7 +27936,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -27922,7 +27962,7 @@ classes: title: injection water breakthrough date of specific well examples: - value: '2018-05-11' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - injection water breakthrough date of specific well rank: 334 @@ -27950,7 +27990,7 @@ classes: title: injection water fraction examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - injection water fraction rank: 335 @@ -27970,7 +28010,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -27978,6 +28018,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -27996,7 +28037,7 @@ classes: title: lithology examples: - value: Volcanic - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - lithology rank: 336 @@ -28024,7 +28065,7 @@ classes: title: magnesium examples: - value: 52.8 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - magnesium rank: 21 @@ -28050,7 +28091,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -28080,7 +28121,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -28109,7 +28150,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -28138,7 +28179,7 @@ classes: title: organism count qPCR information examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count qPCR information rank: 337 @@ -28167,7 +28208,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -28184,7 +28225,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -28209,7 +28250,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -28234,7 +28275,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -28261,7 +28302,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -28290,7 +28331,7 @@ classes: title: pour point examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pour point rank: 341 @@ -28319,7 +28360,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -28348,7 +28389,7 @@ classes: title: production rate examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - production rate rank: 344 @@ -28374,7 +28415,7 @@ classes: title: production start date examples: - value: '2018-05-11' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - production start date rank: 345 @@ -28399,7 +28440,7 @@ classes: title: reservoir name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - reservoir name rank: 347 @@ -28428,7 +28469,7 @@ classes: title: resins wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - resins wt% rank: 348 @@ -28458,7 +28499,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -28483,7 +28524,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -28509,7 +28550,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -28535,7 +28576,7 @@ classes: title: sample collection point examples: - value: well - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection point rank: 349 @@ -28563,7 +28604,7 @@ classes: title: corrosion rate at sample location examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - corrosion rate at sample location rank: 350 @@ -28587,7 +28628,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -28616,7 +28657,7 @@ classes: title: preservative added to sample examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - preservative added to sample rank: 352 @@ -28646,7 +28687,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -28673,7 +28714,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -28699,7 +28740,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -28728,7 +28769,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -28755,7 +28796,7 @@ classes: title: sample subtype examples: - value: biofilm - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample subtype rank: 354 @@ -28783,7 +28824,7 @@ classes: title: sample transport conditions examples: - value: 5 days;-20 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample transport conditions rank: 355 @@ -28809,7 +28850,7 @@ classes: title: sample type examples: - value: built environment sample [GENEPIO:0001248] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample type rank: 357 @@ -28836,7 +28877,7 @@ classes: title: sample well name examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample well name rank: 358 @@ -28859,7 +28900,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -28886,7 +28927,7 @@ classes: title: saturates wt% examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - saturates wt% rank: 359 @@ -28910,7 +28951,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -28939,7 +28980,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -28959,7 +29000,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -28988,7 +29029,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -29017,7 +29058,7 @@ classes: title: sulfate in formation water examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate in formation water rank: 370 @@ -29046,7 +29087,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -29075,7 +29116,7 @@ classes: title: suspended solids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - suspended solids rank: 372 @@ -29105,7 +29146,7 @@ classes: title: total acid number examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total acid number rank: 373 @@ -29131,7 +29172,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -29160,7 +29201,7 @@ classes: title: toluene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - toluene rank: 375 @@ -29189,7 +29230,7 @@ classes: title: total iron examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total iron rank: 376 @@ -29218,7 +29259,7 @@ classes: title: total nitrogen concentration examples: - value: 50 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total nitrogen concentration rank: 377 @@ -29247,7 +29288,7 @@ classes: title: total phosphorus examples: - value: 0.03 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total phosphorus rank: 52 @@ -29276,7 +29317,7 @@ classes: title: total sulfur examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total sulfur rank: 379 @@ -29305,7 +29346,7 @@ classes: title: depth (TVDSS) of hydrocarbon resource pressure examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth (TVDSS) of hydrocarbon resource pressure rank: 380 @@ -29334,7 +29375,7 @@ classes: title: depth (TVDSS) of hydrocarbon resource temperature examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth (TVDSS) of hydrocarbon resource temperature rank: 381 @@ -29363,7 +29404,7 @@ classes: title: volatile fatty acids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - volatile fatty acids rank: 382 @@ -29392,7 +29433,7 @@ classes: title: vfa in formation water examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - vfa in formation water rank: 383 @@ -29421,7 +29462,7 @@ classes: title: viscosity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - viscosity rank: 384 @@ -29450,7 +29491,7 @@ classes: title: water cut examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water cut rank: 386 @@ -29479,7 +29520,7 @@ classes: title: water production rate examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water production rate rank: 387 @@ -29505,7 +29546,7 @@ classes: title: well identification number examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - well identification number rank: 388 @@ -29534,7 +29575,7 @@ classes: title: xylene examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - xylene rank: 389 @@ -29634,7 +29675,7 @@ classes: title: altitude examples: - value: 100 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - altitude rank: 26 @@ -29661,7 +29702,7 @@ classes: title: ancestral data examples: - value: A/3*B - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ancestral data rank: 237 @@ -29687,7 +29728,7 @@ classes: title: biological status examples: - value: natural - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biological status rank: 239 @@ -29715,7 +29756,7 @@ classes: title: host blood pressure diastolic examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host blood pressure diastolic rank: 299 @@ -29744,7 +29785,7 @@ classes: title: host blood pressure systolic examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host blood pressure systolic rank: 300 @@ -29771,7 +29812,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -29801,7 +29842,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -29831,7 +29872,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -29853,7 +29894,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -29873,7 +29914,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -29893,7 +29934,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -29913,7 +29954,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -29936,13 +29977,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -29953,7 +29995,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -29978,7 +30020,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -29999,7 +30041,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -30020,7 +30062,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -30042,7 +30084,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -30068,7 +30110,7 @@ classes: title: genetic modification examples: - value: aox1A transgenic - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - genetic modification rank: 244 @@ -30091,7 +30133,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -30101,6 +30143,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -30119,7 +30162,7 @@ classes: title: gravidity examples: - value: yes;due date:2018-05-11 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - gravidity rank: 312 @@ -30145,7 +30188,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -30174,7 +30217,7 @@ classes: title: host age examples: - value: 10 days - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host age rank: 249 @@ -30200,7 +30243,7 @@ classes: title: host body habitat examples: - value: nasopharynx - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host body habitat rank: 319 @@ -30226,7 +30269,7 @@ classes: title: host body product examples: - value: Portion of mucus [fma66938] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host body product rank: 320 @@ -30253,7 +30296,7 @@ classes: title: host body site examples: - value: gill [UBERON:0002535] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host body site rank: 321 @@ -30283,7 +30326,7 @@ classes: title: host body temperature examples: - value: 15 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host body temperature rank: 322 @@ -30309,7 +30352,7 @@ classes: title: host color examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host color rank: 323 @@ -30335,7 +30378,7 @@ classes: title: host common name examples: - value: human - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host common name rank: 250 @@ -30361,7 +30404,7 @@ classes: title: host diet examples: - value: herbivore - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host diet rank: 324 @@ -30390,7 +30433,7 @@ classes: title: host dry mass examples: - value: 500 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host dry mass rank: 251 @@ -30416,7 +30459,7 @@ classes: title: host family relationship examples: - value: offspring;Mussel25 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host family relationship rank: 325 @@ -30442,7 +30485,7 @@ classes: title: host genotype examples: - value: C57BL/6 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host genotype rank: 252 @@ -30468,7 +30511,7 @@ classes: title: host growth conditions examples: - value: https://academic.oup.com/icesjms/article/68/2/349/617247 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host growth conditions rank: 326 @@ -30497,7 +30540,7 @@ classes: title: host height examples: - value: 0.1 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host height rank: 253 @@ -30523,7 +30566,7 @@ classes: title: host last meal examples: - value: corn feed;P2H - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host last meal rank: 327 @@ -30552,7 +30595,7 @@ classes: title: host length examples: - value: 1 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host length rank: 254 @@ -30578,7 +30621,7 @@ classes: title: host life stage examples: - value: adult - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host life stage rank: 255 @@ -30604,7 +30647,7 @@ classes: title: host phenotype examples: - value: elongated [PATO:0001154] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host phenotype rank: 256 @@ -30631,7 +30674,7 @@ classes: title: host sex examples: - value: non-binary - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host sex rank: 328 @@ -30656,7 +30699,7 @@ classes: title: host shape examples: - value: round - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host shape rank: 329 @@ -30682,7 +30725,7 @@ classes: title: host subject id examples: - value: MPI123 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host subject id rank: 330 @@ -30708,7 +30751,7 @@ classes: title: host subspecific genetic lineage examples: - value: 'serovar:Newport, variety:glabrum, cultivar: Red Delicious' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host subspecific genetic lineage rank: 257 @@ -30734,7 +30777,7 @@ classes: title: host substrate examples: - value: rock - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host substrate rank: 331 @@ -30760,7 +30803,7 @@ classes: title: observed host symbionts examples: - value: flukeworms - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - observed host symbionts rank: 258 @@ -30786,7 +30829,7 @@ classes: title: host taxid comments: - Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host taxid rank: 259 @@ -30814,7 +30857,7 @@ classes: title: host total mass examples: - value: 2500 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host total mass rank: 260 @@ -30834,7 +30877,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -30842,6 +30885,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -30860,7 +30904,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -30890,7 +30934,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -30907,7 +30951,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -30930,7 +30974,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -30959,7 +31003,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -30985,7 +31029,7 @@ classes: title: sample capture status examples: - value: farm sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample capture status rank: 282 @@ -31009,7 +31053,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -31035,7 +31079,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -31061,7 +31105,7 @@ classes: title: sample disease stage examples: - value: infection - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample disease stage rank: 283 @@ -31084,7 +31128,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -31113,7 +31157,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -31140,7 +31184,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -31166,7 +31210,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -31195,7 +31239,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -31219,7 +31263,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -31240,7 +31284,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -31260,7 +31304,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -31286,7 +31330,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -31351,12 +31395,14 @@ classes: - Recommended value is between 1 and 3. examples: - value: '2.02' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 + is_a: biomaterial_purity string_serialization: '{float}' owner: Biosample domain_of: - Biosample + - ProcessedSample slot_group: jgi_metagenomics_section range: float recommended: true @@ -31368,8 +31414,9 @@ classes: - Recommended value is between 1 and 3. examples: - value: '2.02' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 + is_a: biomaterial_purity string_serialization: '{float}' owner: Biosample domain_of: @@ -31384,12 +31431,15 @@ classes: - Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000. examples: - value: '100' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc + see_also: + - nmdc:nucleic_acid_concentration rank: 5 string_serialization: '{float}' owner: Biosample domain_of: - Biosample + - ProcessedSample slot_group: jgi_metagenomics_section range: float required: true @@ -31402,7 +31452,7 @@ classes: title: DNA container type examples: - value: plate - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 10 owner: Biosample domain_of: @@ -31421,7 +31471,7 @@ classes: - For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8). examples: - value: B2 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 11 string_serialization: '{96 well plate pos}' owner: Biosample @@ -31439,7 +31489,7 @@ classes: - Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label. examples: - value: Pond_MT_041618 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 9 string_serialization: '{text < 20 characters}' owner: Biosample @@ -31458,7 +31508,7 @@ classes: - Note DNase treatment is required for all RNA samples. examples: - value: 'no' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 13 owner: Biosample domain_of: @@ -31473,7 +31523,7 @@ classes: title: DNA isolation method examples: - value: phenol/chloroform extraction - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 16 string_serialization: '{text}' owner: Biosample @@ -31491,7 +31541,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: John Jones - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 18 string_serialization: '{text}' owner: Biosample @@ -31511,7 +31561,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '187654' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 3 string_serialization: '{text}' owner: Biosample @@ -31528,7 +31578,7 @@ classes: title: DNA sample format examples: - value: Water - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 12 owner: Biosample domain_of: @@ -31543,7 +31593,7 @@ classes: title: DNA sample name examples: - value: JGI_pond_041618 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 4 string_serialization: '{text}' owner: Biosample @@ -31561,7 +31611,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '1191234' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 1 string_serialization: '{text}' owner: Biosample @@ -31579,7 +31629,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: JGI Pond metagenomics - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 2 string_serialization: '{text}' owner: Biosample @@ -31597,7 +31647,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: Jane Johnson - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 17 string_serialization: '{text}' owner: Biosample @@ -31612,10 +31662,10 @@ classes: name: dna_volume title: DNA volume in ul comments: - - Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only. + - Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager examples: - value: '25' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 string_serialization: '{float}' owner: Biosample @@ -31625,7 +31675,7 @@ classes: range: float required: true recommended: true - minimum_value: 25 + minimum_value: 0 maximum_value: 1000 proposal_dna: name: proposal_dna @@ -31634,7 +31684,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '504000' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 19 string_serialization: '{text}' owner: Biosample @@ -31724,7 +31774,7 @@ classes: - Note DNase treatment is required for all RNA samples. examples: - value: 'no' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 13 owner: Biosample domain_of: @@ -31740,7 +31790,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '504000' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 19 string_serialization: '{text}' owner: Biosample @@ -31759,8 +31809,9 @@ classes: - Recommended value is between 1 and 3. examples: - value: '2.02' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 + is_a: biomaterial_purity string_serialization: '{float}' owner: Biosample domain_of: @@ -31776,8 +31827,9 @@ classes: - Recommended value is between 1 and 3. examples: - value: '2.02' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 + is_a: biomaterial_purity string_serialization: '{float}' owner: Biosample domain_of: @@ -31792,7 +31844,9 @@ classes: - Units must be in ng/uL. Enter the numerical part only. Must be calculated using a fluorometric method. Acceptable values are 0-2000. examples: - value: '100' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc + see_also: + - nmdc:nucleic_acid_concentration rank: 5 string_serialization: '{float}' owner: Biosample @@ -31810,7 +31864,7 @@ classes: title: RNA container type examples: - value: plate - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 10 owner: Biosample domain_of: @@ -31829,7 +31883,7 @@ classes: - For partial plates, fill by columns, like B1-G1,A2-H2,A3-D3 (NOT A2-A11,B1-B8). examples: - value: B2 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 11 string_serialization: '{96 well plate pos}' owner: Biosample @@ -31847,7 +31901,7 @@ classes: - Must be unique across all tubes and plates, and <20 characters. All samples in a plate should have the same plate label. examples: - value: Pond_MT_041618 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 9 string_serialization: '{text < 20 characters}' owner: Biosample @@ -31865,7 +31919,7 @@ classes: title: RNA isolation method examples: - value: phenol/chloroform extraction - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 16 string_serialization: '{text}' owner: Biosample @@ -31883,7 +31937,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: John Jones - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 18 string_serialization: '{text}' owner: Biosample @@ -31901,7 +31955,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '187654' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 3 string_serialization: '{text}' owner: Biosample @@ -31918,7 +31972,7 @@ classes: title: RNA sample format examples: - value: Water - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 12 owner: Biosample domain_of: @@ -31933,7 +31987,7 @@ classes: title: RNA sample name examples: - value: JGI_pond_041618 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 4 string_serialization: '{text}' owner: Biosample @@ -31953,7 +32007,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: '1191234' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 1 string_serialization: '{text}' owner: Biosample @@ -31971,7 +32025,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: JGI Pond metatranscriptomics - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 2 string_serialization: '{text}' owner: Biosample @@ -31989,7 +32043,7 @@ classes: - Do not edit these values. A template will be provided by NMDC in which these values have been pre-filled. examples: - value: Jane Johnson - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 17 string_serialization: '{text}' owner: Biosample @@ -32004,10 +32058,10 @@ classes: name: rna_volume title: RNA volume in ul comments: - - Units must be in uL. Enter the numerical part only. Value must be 0-1000. Values <25 by special permission only. + - Units must be in uL. Enter the numerical part only. Value must be 0-1000. This form accepts values < 25, but JGI may refuse to process them unless permission has been granted by a project manager examples: - value: '25' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 string_serialization: '{float}' owner: Biosample @@ -32017,7 +32071,7 @@ classes: range: float required: true recommended: true - minimum_value: 25 + minimum_value: 0 maximum_value: 1000 oxy_stat_samp: name: oxy_stat_samp @@ -32137,7 +32191,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -32160,7 +32214,7 @@ classes: title: altitude examples: - value: 100 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - altitude rank: 26 @@ -32190,7 +32244,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -32219,7 +32273,7 @@ classes: title: biomass examples: - value: total;20 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biomass rank: 6 @@ -32249,7 +32303,7 @@ classes: title: bromide examples: - value: 0.05 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bromide rank: 8 @@ -32278,7 +32332,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -32305,7 +32359,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -32336,7 +32390,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -32365,7 +32419,7 @@ classes: title: chlorophyll examples: - value: 5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chlorophyll rank: 11 @@ -32393,7 +32447,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -32424,7 +32478,7 @@ classes: title: density examples: - value: 1000 kilogram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - density rank: 12 @@ -32452,7 +32506,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -32483,7 +32537,7 @@ classes: title: diether lipids examples: - value: 0.2 nanogram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - diether lipids rank: 13 @@ -32513,7 +32567,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -32542,7 +32596,7 @@ classes: title: dissolved hydrogen examples: - value: 0.3 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved hydrogen rank: 15 @@ -32571,7 +32625,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -32600,7 +32654,7 @@ classes: title: dissolved organic nitrogen examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic nitrogen rank: 18 @@ -32629,7 +32683,7 @@ classes: title: dissolved oxygen examples: - value: 175 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen rank: 19 @@ -32649,7 +32703,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -32669,7 +32723,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -32689,7 +32743,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -32709,7 +32763,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -32732,13 +32786,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -32749,7 +32804,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -32774,7 +32829,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -32795,7 +32850,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -32816,7 +32871,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -32838,7 +32893,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -32861,7 +32916,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -32871,6 +32926,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -32889,7 +32945,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -32909,7 +32965,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -32917,6 +32973,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -32935,7 +32992,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -32965,7 +33022,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -32994,7 +33051,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -33023,7 +33080,7 @@ classes: title: nitrogen examples: - value: 4.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrogen rank: 28 @@ -33052,7 +33109,7 @@ classes: title: organic carbon examples: - value: 1.5 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic carbon rank: 29 @@ -33081,7 +33138,7 @@ classes: title: organic matter examples: - value: 1.75 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic matter rank: 45 @@ -33110,7 +33167,7 @@ classes: title: organic nitrogen examples: - value: 4 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic nitrogen rank: 46 @@ -33139,7 +33196,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -33156,7 +33213,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -33179,7 +33236,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -33207,7 +33264,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -33232,7 +33289,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -33259,7 +33316,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -33288,7 +33345,7 @@ classes: title: phospholipid fatty acid examples: - value: 2.98 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phospholipid fatty acid rank: 36 @@ -33318,7 +33375,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -33347,7 +33404,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -33376,7 +33433,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -33401,7 +33458,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -33427,7 +33484,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -33451,7 +33508,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -33480,7 +33537,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -33507,7 +33564,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -33533,7 +33590,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -33562,7 +33619,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -33586,7 +33643,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -33613,7 +33670,7 @@ classes: title: silicate examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - silicate rank: 43 @@ -33636,7 +33693,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -33665,7 +33722,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -33685,7 +33742,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -33714,7 +33771,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -33743,7 +33800,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -33769,7 +33826,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -33798,7 +33855,7 @@ classes: title: water current examples: - value: 10 cubic meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water current rank: 236 @@ -33929,7 +33986,7 @@ classes: title: air temperature regimen examples: - value: 25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - air temperature regimen rank: 16 @@ -33956,7 +34013,7 @@ classes: title: ancestral data examples: - value: A/3*B - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ancestral data rank: 237 @@ -33985,7 +34042,7 @@ classes: title: antibiotic regimen examples: - value: penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - antibiotic regimen rank: 238 @@ -34011,7 +34068,7 @@ classes: title: biological status examples: - value: natural - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biological status rank: 239 @@ -34036,7 +34093,7 @@ classes: title: biotic regimen examples: - value: sample inoculated with Rhizobium spp. Culture - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biotic regimen rank: 13 @@ -34064,7 +34121,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -34095,7 +34152,7 @@ classes: title: chemical mutagen examples: - value: nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical mutagen rank: 240 @@ -34117,7 +34174,7 @@ classes: - add examples, i need to see some examples to add correctly formatted example. - description says "can include multiple climates" but multivalued is set to false - add examples, i need to see some examples to add correctly formatted example. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 19 is_a: core field string_serialization: '{text};{Rn/start_time/end_time/duration}' @@ -34144,7 +34201,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -34172,7 +34229,7 @@ classes: title: culture rooting medium examples: - value: http://himedialabs.com/TD/PT158.pdf - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - culture rooting medium rank: 241 @@ -34200,7 +34257,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -34222,7 +34279,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -34242,7 +34299,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -34262,7 +34319,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -34282,7 +34339,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -34305,13 +34362,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -34322,7 +34380,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -34347,7 +34405,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -34368,7 +34426,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -34389,7 +34447,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -34411,7 +34469,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -34440,7 +34498,7 @@ classes: title: fertilizer regimen examples: - value: urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - fertilizer regimen rank: 242 @@ -34469,7 +34527,7 @@ classes: title: fungicide regimen examples: - value: bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - fungicide regimen rank: 243 @@ -34494,7 +34552,7 @@ classes: examples: - value: CO2; 500ppm above ambient; constant - value: nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 20 is_a: core field string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}' @@ -34519,7 +34577,7 @@ classes: title: genetic modification examples: - value: aox1A transgenic - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - genetic modification rank: 244 @@ -34542,7 +34600,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -34552,6 +34610,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -34573,7 +34632,7 @@ classes: title: gravity examples: - value: 12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - gravity rank: 245 @@ -34601,7 +34660,7 @@ classes: - 'Removed from description: Alternatively use Crop Ontology (CO) terms' examples: - value: Growth chamber [CO_715:0000189] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - growth facility rank: 1 @@ -34628,7 +34687,7 @@ classes: title: growth habit examples: - value: spreading - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - growth habit rank: 246 @@ -34656,7 +34715,7 @@ classes: title: growth hormone regimen examples: - value: abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - growth hormone regimen rank: 247 @@ -34685,7 +34744,7 @@ classes: title: herbicide regimen examples: - value: atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - herbicide regimen rank: 248 @@ -34711,7 +34770,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -34740,7 +34799,7 @@ classes: title: host age examples: - value: 10 days - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host age rank: 249 @@ -34766,7 +34825,7 @@ classes: title: host common name examples: - value: human - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host common name rank: 250 @@ -34795,7 +34854,7 @@ classes: title: host dry mass examples: - value: 500 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host dry mass rank: 251 @@ -34821,7 +34880,7 @@ classes: title: host genotype examples: - value: C57BL/6 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host genotype rank: 252 @@ -34850,7 +34909,7 @@ classes: title: host height examples: - value: 0.1 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host height rank: 253 @@ -34879,7 +34938,7 @@ classes: title: host length examples: - value: 1 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host length rank: 254 @@ -34905,7 +34964,7 @@ classes: title: host life stage examples: - value: adult - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host life stage rank: 255 @@ -34931,7 +34990,7 @@ classes: title: host phenotype examples: - value: elongated [PATO:0001154] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host phenotype rank: 256 @@ -34958,7 +35017,7 @@ classes: title: host subspecific genetic lineage examples: - value: 'serovar:Newport, variety:glabrum, cultivar: Red Delicious' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host subspecific genetic lineage rank: 257 @@ -34984,7 +35043,7 @@ classes: title: observed host symbionts examples: - value: flukeworms - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - observed host symbionts rank: 258 @@ -35010,7 +35069,7 @@ classes: title: host taxid comments: - Homo sapiens [NCBITaxon:9606] would be a reasonable has_raw_value - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host taxid rank: 259 @@ -35038,7 +35097,7 @@ classes: title: host total mass examples: - value: 2500 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host total mass rank: 260 @@ -35067,7 +35126,7 @@ classes: title: host wet mass examples: - value: 1500 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - host wet mass rank: 261 @@ -35096,7 +35155,7 @@ classes: title: humidity regimen examples: - value: 25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - humidity regimen rank: 21 @@ -35117,7 +35176,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -35125,6 +35184,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -35146,7 +35206,7 @@ classes: title: light regimen examples: - value: incandescant light;10 lux;450 nanometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - light regimen rank: 24 @@ -35174,7 +35234,7 @@ classes: title: mechanical damage examples: - value: pruning;bark - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mechanical damage rank: 262 @@ -35203,7 +35263,7 @@ classes: title: mineral nutrient regimen examples: - value: potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mineral nutrient regimen rank: 263 @@ -35229,7 +35289,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -35259,7 +35319,7 @@ classes: title: non-mineral nutrient regimen examples: - value: carbon dioxide;10 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - non-mineral nutrient regimen rank: 264 @@ -35288,7 +35348,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -35305,7 +35365,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -35328,7 +35388,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -35357,7 +35417,7 @@ classes: title: pesticide regimen examples: - value: pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pesticide regimen rank: 265 @@ -35383,7 +35443,7 @@ classes: title: pH regimen examples: - value: 7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH regimen rank: 266 @@ -35409,7 +35469,7 @@ classes: title: plant growth medium examples: - value: hydroponic plant culture media [EO:0007067] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - plant growth medium rank: 267 @@ -35434,7 +35494,7 @@ classes: title: plant product examples: - value: xylem sap [PO:0025539] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - plant product rank: 268 @@ -35460,7 +35520,7 @@ classes: title: plant sex examples: - value: Hermaphroditic - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - plant sex rank: 269 @@ -35485,7 +35545,7 @@ classes: title: plant structure examples: - value: epidermis [PO:0005679] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - plant structure rank: 270 @@ -35515,7 +35575,7 @@ classes: title: radiation regimen examples: - value: gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - radiation regimen rank: 271 @@ -35544,7 +35604,7 @@ classes: title: rainfall regimen examples: - value: 15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rainfall regimen rank: 272 @@ -35570,7 +35630,7 @@ classes: title: rooting conditions examples: - value: http://himedialabs.com/TD/PT158.pdf - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting conditions rank: 273 @@ -35599,7 +35659,7 @@ classes: title: rooting medium carbon examples: - value: sucrose - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium carbon rank: 274 @@ -35629,7 +35689,7 @@ classes: title: rooting medium macronutrients examples: - value: KH2PO4;170¬†milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium macronutrients rank: 275 @@ -35659,7 +35719,7 @@ classes: title: rooting medium micronutrients examples: - value: H3BO3;6.2¬†milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium micronutrients rank: 276 @@ -35686,7 +35746,7 @@ classes: title: rooting medium pH examples: - value: '7.5' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium pH rank: 277 @@ -35715,7 +35775,7 @@ classes: title: rooting medium regulators examples: - value: abscisic acid;0.75 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium regulators rank: 278 @@ -35742,7 +35802,7 @@ classes: title: rooting medium solidifier examples: - value: agar - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium solidifier rank: 279 @@ -35771,7 +35831,7 @@ classes: title: rooting medium organic supplements examples: - value: nicotinic acid;0.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - rooting medium organic supplements rank: 280 @@ -35801,7 +35861,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -35830,7 +35890,7 @@ classes: title: salt regimen examples: - value: NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salt regimen rank: 281 @@ -35856,7 +35916,7 @@ classes: title: sample capture status examples: - value: farm sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample capture status rank: 282 @@ -35880,7 +35940,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -35906,7 +35966,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -35932,7 +35992,7 @@ classes: title: sample disease stage examples: - value: infection - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample disease stage rank: 283 @@ -35955,7 +36015,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -35984,7 +36044,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -36011,7 +36071,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -36037,7 +36097,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -36066,7 +36126,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -36090,7 +36150,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -36114,7 +36174,7 @@ classes: title: seasonal environment examples: - value: rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - seasonal environment rank: 284 @@ -36137,7 +36197,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -36157,7 +36217,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -36183,7 +36243,7 @@ classes: title: standing water regimen examples: - value: standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - standing water regimen rank: 286 @@ -36209,7 +36269,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -36235,7 +36295,7 @@ classes: title: tissue culture growth media examples: - value: https://link.springer.com/content/pdf/10.1007/BF02796489.pdf - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - tissue culture growth media rank: 287 @@ -36264,7 +36324,7 @@ classes: title: water temperature regimen examples: - value: 15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water temperature regimen rank: 288 @@ -36284,7 +36344,7 @@ classes: examples: - value: 1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - value: 75% water holding capacity; constant - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}' @@ -36411,7 +36471,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -36440,7 +36500,7 @@ classes: title: alkyl diethers examples: - value: 0.005 mole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkyl diethers rank: 2 @@ -36469,7 +36529,7 @@ classes: title: aminopeptidase activity examples: - value: 0.269 mole per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aminopeptidase activity rank: 3 @@ -36498,7 +36558,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -36527,7 +36587,7 @@ classes: title: bacterial carbon production examples: - value: 2.53 microgram per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bacterial carbon production rank: 5 @@ -36556,7 +36616,7 @@ classes: title: biomass examples: - value: total;20 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biomass rank: 6 @@ -36586,7 +36646,7 @@ classes: title: bishomohopanol examples: - value: 14 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bishomohopanol rank: 7 @@ -36615,7 +36675,7 @@ classes: title: bromide examples: - value: 0.05 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bromide rank: 8 @@ -36644,7 +36704,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -36670,7 +36730,7 @@ classes: title: carbon/nitrogen ratio examples: - value: '0.417361111' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon/nitrogen ratio rank: 44 @@ -36697,7 +36757,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -36728,7 +36788,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -36757,7 +36817,7 @@ classes: title: chlorophyll examples: - value: 5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chlorophyll rank: 11 @@ -36785,7 +36845,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -36816,7 +36876,7 @@ classes: title: density examples: - value: 1000 kilogram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - density rank: 12 @@ -36844,7 +36904,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -36875,7 +36935,7 @@ classes: title: diether lipids examples: - value: 0.2 nanogram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - diether lipids rank: 13 @@ -36905,7 +36965,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -36934,7 +36994,7 @@ classes: title: dissolved hydrogen examples: - value: 0.3 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved hydrogen rank: 15 @@ -36963,7 +37023,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -36992,7 +37052,7 @@ classes: title: dissolved organic carbon examples: - value: 197 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic carbon rank: 17 @@ -37021,7 +37081,7 @@ classes: title: dissolved organic nitrogen examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic nitrogen rank: 18 @@ -37050,7 +37110,7 @@ classes: title: dissolved oxygen examples: - value: 175 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen rank: 19 @@ -37070,7 +37130,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -37090,7 +37150,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -37110,7 +37170,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -37130,7 +37190,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -37153,13 +37213,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -37170,7 +37231,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -37195,7 +37256,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -37216,7 +37277,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -37237,7 +37298,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -37259,7 +37320,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -37282,7 +37343,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -37292,6 +37353,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -37313,7 +37375,7 @@ classes: title: glucosidase activity examples: - value: 5 mol per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - glucosidase activity rank: 20 @@ -37339,7 +37401,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -37359,7 +37421,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -37367,6 +37429,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -37388,7 +37451,7 @@ classes: title: magnesium examples: - value: 52.8 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - magnesium rank: 21 @@ -37417,7 +37480,7 @@ classes: title: mean friction velocity examples: - value: 0.5 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean friction velocity rank: 22 @@ -37446,7 +37509,7 @@ classes: title: mean peak friction velocity examples: - value: 1 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean peak friction velocity rank: 23 @@ -37475,7 +37538,7 @@ classes: title: methane examples: - value: 1800 parts per billion - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - methane rank: 24 @@ -37501,7 +37564,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -37531,7 +37594,7 @@ classes: title: n-alkanes examples: - value: n-hexadecane;100 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - n-alkanes rank: 25 @@ -37561,7 +37624,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -37590,7 +37653,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -37619,7 +37682,7 @@ classes: title: nitrogen examples: - value: 4.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrogen rank: 28 @@ -37648,7 +37711,7 @@ classes: title: organic carbon examples: - value: 1.5 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic carbon rank: 29 @@ -37677,7 +37740,7 @@ classes: title: organic matter examples: - value: 1.75 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic matter rank: 45 @@ -37706,7 +37769,7 @@ classes: title: organic nitrogen examples: - value: 4 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic nitrogen rank: 46 @@ -37735,7 +37798,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -37752,7 +37815,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -37778,7 +37841,7 @@ classes: title: particulate organic carbon examples: - value: 1.92 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - particulate organic carbon rank: 31 @@ -37807,7 +37870,7 @@ classes: title: particle classification examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - particle classification rank: 32 @@ -37834,7 +37897,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -37863,7 +37926,7 @@ classes: title: petroleum hydrocarbon examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - petroleum hydrocarbon rank: 34 @@ -37891,7 +37954,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -37916,7 +37979,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -37943,7 +38006,7 @@ classes: title: phaeopigments examples: - value: 2.5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phaeopigments rank: 35 @@ -37973,7 +38036,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -38002,7 +38065,7 @@ classes: title: phospholipid fatty acid examples: - value: 2.98 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phospholipid fatty acid rank: 36 @@ -38032,7 +38095,7 @@ classes: title: porosity examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - porosity rank: 37 @@ -38061,7 +38124,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -38090,7 +38153,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -38119,7 +38182,7 @@ classes: title: redox potential examples: - value: 300 millivolt - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - redox potential rank: 40 @@ -38148,7 +38211,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -38173,7 +38236,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -38199,7 +38262,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -38223,7 +38286,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -38252,7 +38315,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -38279,7 +38342,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -38305,7 +38368,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -38334,7 +38397,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -38358,7 +38421,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -38382,7 +38445,7 @@ classes: title: sediment type examples: - value: biogenous - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sediment type rank: 42 @@ -38410,7 +38473,7 @@ classes: title: silicate examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - silicate rank: 43 @@ -38433,7 +38496,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -38462,7 +38525,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -38482,7 +38545,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -38511,7 +38574,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -38540,7 +38603,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -38566,7 +38629,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -38592,7 +38655,7 @@ classes: title: tidal stage examples: - value: high tide - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - tidal stage rank: 45 @@ -38615,7 +38678,7 @@ classes: - ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format examples: - value: 1 ug/L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 47 is_a: core field slot_uri: MIXS:0000525 @@ -38642,7 +38705,7 @@ classes: title: total depth of water column examples: - value: 500 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total depth of water column rank: 46 @@ -38661,7 +38724,7 @@ classes: title: total nitrogen content examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 48 is_a: core field slot_uri: MIXS:0000530 @@ -38681,7 +38744,7 @@ classes: - check description. How are they different? examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 50 is_a: core field slot_uri: MIXS:0000533 @@ -38708,7 +38771,7 @@ classes: title: turbidity examples: - value: 0.3 nephelometric turbidity units - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - turbidity rank: 47 @@ -38748,7 +38811,7 @@ classes: - value: 75% water holding capacity - value: 1.1 g fresh weight/ dry weight - value: 10% water filled pore space - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 39 is_a: core field string_serialization: '{float or pct} {unit}' @@ -38905,7 +38968,7 @@ classes: title: history/agrochemical additions examples: - value: roundup;5 milligram per liter;2018-06-21 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - history/agrochemical additions rank: 2 @@ -38935,7 +38998,7 @@ classes: title: air temperature regimen examples: - value: 25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - air temperature regimen rank: 16 @@ -38964,7 +39027,7 @@ classes: - Aluminum saturation is the percentage of the CEC occupies by aluminum. Like all cations, aluminum held by the cation exchange complex is in equilibrium with aluminum in the soil solution. examples: - value: '0.27' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 3 is_a: core field slot_uri: MIXS:0000607 @@ -38988,7 +39051,7 @@ classes: - Required when aluminum saturation is provided. examples: - value: https://doi.org/10.1371/journal.pone.0176357 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 4 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -39015,7 +39078,7 @@ classes: title: ammonium nitrogen examples: - value: 2.3 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -39039,7 +39102,7 @@ classes: - This is no longer matching the listed IRI from GSC, added example. When NMDC has its own slots, map this to the MIxS slot examples: - value: 8.94 inch - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: core field slot_uri: MIXS:0000644 @@ -39066,7 +39129,7 @@ classes: title: mean annual temperature examples: - value: 12.5 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean annual temperature rank: 6 @@ -39092,7 +39155,7 @@ classes: title: biotic regimen examples: - value: sample inoculated with Rhizobium spp. Culture - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biotic regimen rank: 13 @@ -39116,7 +39179,7 @@ classes: title: observed biotic relationship examples: - value: free living - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - observed biotic relationship rank: 22 @@ -39141,7 +39204,7 @@ classes: title: carbon/nitrogen ratio examples: - value: '0.417361111' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon/nitrogen ratio rank: 44 @@ -39168,7 +39231,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -39192,7 +39255,7 @@ classes: - add examples, i need to see some examples to add correctly formatted example. - description says "can include multiple climates" but multivalued is set to false - add examples, i need to see some examples to add correctly formatted example. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 19 is_a: core field string_serialization: '{text};{Rn/start_time/end_time/duration}' @@ -39219,7 +39282,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -39244,7 +39307,7 @@ classes: - Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable. examples: - value: 2021-04-15, 2021-04 and 2021 are all acceptable. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 2 @@ -39267,7 +39330,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 1 @@ -39290,7 +39353,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 3 @@ -39316,7 +39379,7 @@ classes: title: history/crop rotation examples: - value: yes;R2/2017-01-01/2018-12-31/P6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - history/crop rotation rank: 7 @@ -39342,7 +39405,7 @@ classes: title: current land use examples: - value: conifers - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - current land use rank: 8 @@ -39370,7 +39433,7 @@ classes: - value: deciduous forest - value: forest - value: Bauhinia variegata - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 9 is_a: core field string_serialization: '{text}' @@ -39378,6 +39441,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_section range: string @@ -39394,7 +39458,7 @@ classes: - Required when current vegetation is provided. examples: - value: https://doi.org/10.1111/j.1654-109X.2011.01154.x - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 10 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -39420,7 +39484,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -39448,7 +39512,7 @@ classes: title: drainage classification examples: - value: well - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - drainage classification rank: 11 @@ -39467,7 +39531,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -39486,7 +39550,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -39505,7 +39569,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -39524,7 +39588,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -39546,13 +39610,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -39563,7 +39628,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -39588,7 +39653,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -39609,7 +39674,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -39630,7 +39695,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -39652,7 +39717,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -39675,7 +39740,7 @@ classes: - Provided pairs will be considered for inclusion as future slots/terms in this data collection template. examples: - value: 'experimental treatment: value' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:experimental_factor|additional_info rank: 7 @@ -39700,7 +39765,7 @@ classes: - This is no longer matching the listed IRI from GSC. When NMDC has its own slots, map this to the MIxS slot examples: - value: 1980-05-18, volcanic eruption - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 13 is_a: core field slot_uri: MIXS:0000320 @@ -39723,7 +39788,7 @@ classes: title: soil_taxonomic/FAO classification examples: - value: Luvisols - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil_taxonomic/FAO classification rank: 14 @@ -39744,7 +39809,7 @@ classes: examples: - value: C18 - value: Basix PES, 13-100-106 FisherSci - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:filter_type rank: 6 @@ -39774,7 +39839,7 @@ classes: examples: - value: '1871-10-10' - value: 1871-10-01 to 1871-10-31 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 15 is_a: core field slot_uri: MIXS:0001086 @@ -39805,7 +39870,7 @@ classes: examples: - value: '1927-04-15' - value: 1927-04 to 1927-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 16 is_a: core field slot_uri: MIXS:0000319 @@ -39827,7 +39892,7 @@ classes: examples: - value: CO2; 500ppm above ambient; constant - value: nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 20 is_a: core field string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}' @@ -39849,7 +39914,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -39859,6 +39924,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -39879,7 +39945,7 @@ classes: - 'Removed from description: Alternatively use Crop Ontology (CO) terms' examples: - value: Growth chamber [CO_715:0000189] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - growth facility rank: 1 @@ -39912,7 +39978,7 @@ classes: examples: - value: mercury 0.09 micrograms per gram - value: mercury 0.09 ug/g; chromium 0.03 ug/g - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 17 is_a: core field string_serialization: '{text};{float} {unit}' @@ -39937,7 +40003,7 @@ classes: examples: - value: https://doi.org/10.3390/ijms9040434 - value: mercury https://doi.org/10.1007/BF01056090; chromium https://doi.org/10.1007/s00216-006-0322-8 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 18 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -39961,7 +40027,7 @@ classes: title: soil horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -39990,7 +40056,7 @@ classes: title: humidity regimen examples: - value: 25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - humidity regimen rank: 21 @@ -40015,7 +40081,7 @@ classes: examples: - value: 13C glucose - value: H218O - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:chem_administration rank: 16 @@ -40035,7 +40101,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -40043,6 +40109,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -40066,7 +40133,7 @@ classes: - This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit examples: - value: 543 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 - https://secure.caes.uga.edu/extension/publications/files/pdf/C%20874_5.PDF @@ -40101,7 +40168,7 @@ classes: - This is the mass of lime, in mg, needed to raise the pH of one kg of soil by one pH unit examples: - value: 1575 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -40132,7 +40199,7 @@ classes: title: light regimen examples: - value: incandescant light;10 lux;450 nanometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - light regimen rank: 24 @@ -40160,7 +40227,7 @@ classes: title: link to classification information examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - link to classification information rank: 20 @@ -40186,7 +40253,7 @@ classes: title: link to climate information examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - link to climate information rank: 21 @@ -40212,7 +40279,7 @@ classes: title: soil_taxonomic/local classification examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil_taxonomic/local classification rank: 22 @@ -40222,6 +40289,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_section range: string @@ -40238,7 +40306,7 @@ classes: title: soil_taxonomic/local classification method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil_taxonomic/local classification method rank: 24 @@ -40267,7 +40335,7 @@ classes: title: manganese examples: - value: 24.7 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -40292,7 +40360,7 @@ classes: examples: - value: https://doi.org/10.1016/0038-0717(87)90052-6 - value: https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:micro_biomass_meth rank: 1004 @@ -40317,7 +40385,7 @@ classes: title: microbial biomass method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - microbial biomass method rank: 43 @@ -40339,7 +40407,7 @@ classes: examples: - value: https://doi.org/10.1016/0038-0717(87)90052-6 - value: https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:micro_biomass_meth rank: 1004 @@ -40366,7 +40434,7 @@ classes: title: microbial biomass examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - microbial biomass rank: 42 @@ -40387,7 +40455,7 @@ classes: - If you provide this, correction factors used for conversion to the final units and method are required examples: - value: 0.05 ug C/g dry soil - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 1004 @@ -40407,7 +40475,7 @@ classes: - If you provide this, correction factors used for conversion to the final units and method are required examples: - value: 0.05 ug N/g dry soil - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 1004 @@ -40432,7 +40500,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -40464,7 +40532,7 @@ classes: - often below some specified limit of detection examples: - value: 0.29 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -40495,7 +40563,7 @@ classes: title: nitrite_nitrogen examples: - value: 1.2 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -40516,7 +40584,7 @@ classes: title: non-microbial biomass examples: - value: insect 0.23 ug; plant 1g - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:biomass|microbial_biomass rank: 8 @@ -40536,7 +40604,7 @@ classes: - required if "non-microbial biomass" is provided examples: - value: https://doi.org/10.1038/s41467-021-26181-3 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 9 @@ -40563,7 +40631,7 @@ classes: title: organic matter examples: - value: 1.75 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic matter rank: 45 @@ -40592,7 +40660,7 @@ classes: title: organic nitrogen examples: - value: 4 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic nitrogen rank: 46 @@ -40613,7 +40681,7 @@ classes: - required if "org_nitro" is provided examples: - value: https://doi.org/10.1016/0038-0717(85)90144-0 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:org_nitro|tot_nitro_cont_meth rank: 14 @@ -40630,7 +40698,7 @@ classes: title: other treatments comments: - This is an open text field to provide any treatments that cannot be captured in the provided slots. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:additional_info rank: 15 @@ -40646,7 +40714,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -40671,7 +40739,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -40696,7 +40764,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -40723,7 +40791,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -40749,7 +40817,7 @@ classes: title: history/previous land use method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - history/previous land use method rank: 26 @@ -40775,7 +40843,7 @@ classes: title: history/previous land use examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - history/previous land use rank: 27 @@ -40802,7 +40870,7 @@ classes: title: profile position examples: - value: summit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - profile position rank: 28 @@ -40830,7 +40898,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -40849,7 +40917,7 @@ classes: title: salinity method examples: - value: https://doi.org/10.1007/978-1-61779-986-0_28 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 55 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -40872,7 +40940,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -40898,7 +40966,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -40922,7 +40990,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -40951,7 +41019,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -40981,7 +41049,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -41005,7 +41073,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -41033,7 +41101,7 @@ classes: examples: - value: 0.4 inch - value: 10.16 mm - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 29 is_a: core field slot_uri: MIXS:0000645 @@ -41060,7 +41128,7 @@ classes: title: mean seasonal temperature examples: - value: 18 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean seasonal temperature rank: 30 @@ -41090,7 +41158,7 @@ classes: - value: 50 g - value: 5 cores - value: 2 mm sieved - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: core field string_serialization: '{{text}|{float} {unit}};{float} {unit}' @@ -41118,7 +41186,7 @@ classes: title: size-fraction lower threshold examples: - value: 0.2 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size-fraction lower threshold rank: 10 @@ -41148,7 +41216,7 @@ classes: title: size-fraction upper threshold examples: - value: 20 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size-fraction upper threshold rank: 11 @@ -41173,7 +41241,7 @@ classes: - Aspect is the orientation of slope, measured clockwise in degrees from 0 to 360, where 0 is north-facing, 90 is east-facing, 180 is south-facing, and 270 is west-facing. examples: - value: '35' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 1 is_a: core field slot_uri: MIXS:0000647 @@ -41195,7 +41263,7 @@ classes: - value: 10% - value: 10 % - value: '0.1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 31 is_a: core field slot_uri: MIXS:0000646 @@ -41219,7 +41287,7 @@ classes: title: soil horizon examples: - value: A horizon - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon rank: 32 @@ -41244,7 +41312,7 @@ classes: title: soil texture measurement examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil texture measurement rank: 33 @@ -41270,7 +41338,7 @@ classes: title: soil texture method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil texture method rank: 34 @@ -41296,7 +41364,7 @@ classes: title: soil type examples: - value: plinthosol [ENVO:00002250] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil type rank: 35 @@ -41306,6 +41374,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_section range: string @@ -41323,7 +41392,7 @@ classes: title: soil type method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil type method rank: 36 @@ -41343,7 +41412,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -41365,7 +41434,7 @@ classes: - Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable. examples: - value: 2021-04-15, 2021-04 and 2021 are all acceptable. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 4 @@ -41388,7 +41457,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 5 @@ -41414,7 +41483,7 @@ classes: title: storage conditions examples: - value: -20 degree Celsius freezer;P2Y10D - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - storage conditions rank: 2 @@ -41441,7 +41510,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -41467,7 +41536,7 @@ classes: title: history/tillage examples: - value: chisel - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - history/tillage rank: 38 @@ -41490,7 +41559,7 @@ classes: - ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format examples: - value: 1 ug/L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 47 is_a: core field slot_uri: MIXS:0000525 @@ -41508,7 +41577,7 @@ classes: examples: - value: https://doi.org/10.2134/agronmonogr9.2.c32 - value: https://acsess.onlinelibrary.wiley.com/doi/full/10.2136/sssaj2009.0389?casa_token=bm0pYIUdNMgAAAAA%3AOWVRR0STHaOe-afTcTdxn5m1hM8n2ltM0wY-b1iYpYdD9dhwppk5j3LvC2IO5yhOIvyLVeQz4NZRCZo - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 49 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -41525,7 +41594,7 @@ classes: title: total nitrogen content examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 48 is_a: core field slot_uri: MIXS:0000530 @@ -41542,7 +41611,7 @@ classes: title: total organic carbon method examples: - value: https://doi.org/10.1080/07352680902776556 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 51 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -41562,7 +41631,7 @@ classes: - check description. How are they different? examples: - value: 5 mg N/ L - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 50 is_a: core field slot_uri: MIXS:0000533 @@ -41589,7 +41658,7 @@ classes: title: total phosphorus examples: - value: 0.03 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total phosphorus rank: 52 @@ -41618,7 +41687,7 @@ classes: examples: - value: J. Nat. Prod. Plant Resour., 2012, 2 (4):500-503 - value: https://dec.alaska.gov/applications/spar/webcalc/definitions.htm - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 40 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -41656,7 +41725,7 @@ classes: - value: 75% water holding capacity - value: 1.1 g fresh weight/ dry weight - value: 10% water filled pore space - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 39 is_a: core field string_serialization: '{float or pct} {unit}' @@ -41675,7 +41744,7 @@ classes: examples: - value: 1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M - value: 75% water holding capacity; constant - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}' @@ -41703,7 +41772,7 @@ classes: title: zinc examples: - value: 2.5 mg/kg - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://www.ornl.gov/content/bio-scales-0 aliases: @@ -41808,7 +41877,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -41837,7 +41906,7 @@ classes: title: biochemical oxygen demand examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biochemical oxygen demand rank: 296 @@ -41864,7 +41933,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -41895,7 +41964,7 @@ classes: title: chemical oxygen demand examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical oxygen demand rank: 301 @@ -41923,7 +41992,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -41953,7 +42022,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -41975,7 +42044,7 @@ classes: - 'range: string or EcosystemEnum? The enum could be dynamic or might be soil biased.' comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -41995,7 +42064,7 @@ classes: - string or EcosystemCategoryEnum range? comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -42015,7 +42084,7 @@ classes: - string or EcosystemSubtypeEnum range? comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -42035,7 +42104,7 @@ classes: - string or EcosystemTypeEnum range? comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -42064,7 +42133,7 @@ classes: title: efficiency percent examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - efficiency percent rank: 307 @@ -42087,13 +42156,14 @@ classes: - value: '225' - value: '0' - value: '1250' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -42114,7 +42184,7 @@ classes: title: emulsions examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - emulsions rank: 308 @@ -42134,7 +42204,7 @@ classes: title: broad-scale environmental context notes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -42159,7 +42229,7 @@ classes: - value: litter layer [ENVO:01000338] - value: understory [01000335] - value: shrub layer [ENVO:01000336] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -42180,7 +42250,7 @@ classes: - range changed to enumeration late in makefile, so this is modified (but "sample ID" anyway) examples: - value: soil [ENVO:00001998] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -42201,7 +42271,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -42223,7 +42293,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:EFO_0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -42252,7 +42322,7 @@ classes: title: gaseous substances examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - gaseous substances rank: 311 @@ -42276,7 +42346,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -42286,6 +42356,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -42304,7 +42375,7 @@ classes: title: horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -42333,7 +42404,7 @@ classes: title: industrial effluent percent examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - industrial effluent percent rank: 332 @@ -42362,7 +42433,7 @@ classes: title: inorganic particles examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - inorganic particles rank: 333 @@ -42383,7 +42454,7 @@ classes: notes: - required where? - This is currently a required field but it's not clear if this should be required for human hosts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{lat lon}' @@ -42391,6 +42462,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -42409,7 +42481,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -42439,7 +42511,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -42468,7 +42540,7 @@ classes: title: organic particles examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic particles rank: 338 @@ -42498,7 +42570,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -42515,7 +42587,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -42538,7 +42610,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -42566,7 +42638,7 @@ classes: - Use modified term examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -42591,7 +42663,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -42618,7 +42690,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -42644,7 +42716,7 @@ classes: title: pre-treatment examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pre-treatment rank: 342 @@ -42670,7 +42742,7 @@ classes: title: primary treatment examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - primary treatment rank: 343 @@ -42696,7 +42768,7 @@ classes: title: reactor type examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - reactor type rank: 346 @@ -42725,7 +42797,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -42750,7 +42822,7 @@ classes: - Report dimensions and details when applicable examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -42776,7 +42848,7 @@ classes: - This can be a citation or description examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -42800,7 +42872,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -42829,7 +42901,7 @@ classes: examples: - value: 5 grams - value: 10 mL - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -42856,7 +42928,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -42882,7 +42954,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -42911,7 +42983,7 @@ classes: title: sample storage temperature examples: - value: -80 Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -42935,7 +43007,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -42959,7 +43031,7 @@ classes: title: secondary treatment examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - secondary treatment rank: 360 @@ -42985,7 +43057,7 @@ classes: title: sewage type examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sewage type rank: 361 @@ -43008,7 +43080,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -43037,7 +43109,7 @@ classes: title: sludge retention time examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sludge retention time rank: 362 @@ -43066,7 +43138,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -43095,7 +43167,7 @@ classes: title: soluble inorganic material examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soluble inorganic material rank: 364 @@ -43125,7 +43197,7 @@ classes: title: soluble organic material examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soluble organic material rank: 365 @@ -43146,7 +43218,7 @@ classes: - string or SpecificEcosystemEnum range? comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -43175,7 +43247,7 @@ classes: title: suspended solids examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - suspended solids rank: 372 @@ -43202,7 +43274,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -43228,7 +43300,7 @@ classes: title: tertiary treatment examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - tertiary treatment rank: 374 @@ -43257,7 +43329,7 @@ classes: title: total nitrogen concentration examples: - value: 50 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total nitrogen concentration rank: 377 @@ -43286,7 +43358,7 @@ classes: title: total phosphate examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total phosphate rank: 378 @@ -43312,7 +43384,7 @@ classes: title: wastewater type examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - wastewater type rank: 385 @@ -43453,7 +43525,7 @@ classes: title: alkalinity examples: - value: 50 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity rank: 1 @@ -43479,7 +43551,7 @@ classes: title: alkalinity method examples: - value: titration - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkalinity method rank: 218 @@ -43508,7 +43580,7 @@ classes: title: alkyl diethers examples: - value: 0.005 mole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - alkyl diethers rank: 2 @@ -43537,7 +43609,7 @@ classes: title: aminopeptidase activity examples: - value: 0.269 mole per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - aminopeptidase activity rank: 3 @@ -43566,7 +43638,7 @@ classes: title: ammonium examples: - value: 1.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - ammonium rank: 4 @@ -43592,7 +43664,7 @@ classes: title: atmospheric data examples: - value: wind speed;9 knots - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - atmospheric data rank: 219 @@ -43622,7 +43694,7 @@ classes: title: bacterial production examples: - value: 5 milligram per cubic meter per day - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bacterial production rank: 220 @@ -43651,7 +43723,7 @@ classes: title: bacterial respiration examples: - value: 300 micromole oxygen per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bacterial respiration rank: 221 @@ -43680,7 +43752,7 @@ classes: title: bacterial carbon production examples: - value: 2.53 microgram per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bacterial carbon production rank: 5 @@ -43709,7 +43781,7 @@ classes: title: biomass examples: - value: total;20 gram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - biomass rank: 6 @@ -43739,7 +43811,7 @@ classes: title: bishomohopanol examples: - value: 14 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bishomohopanol rank: 7 @@ -43768,7 +43840,7 @@ classes: title: bromide examples: - value: 0.05 parts per million - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - bromide rank: 8 @@ -43797,7 +43869,7 @@ classes: title: calcium examples: - value: 0.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - calcium rank: 9 @@ -43823,7 +43895,7 @@ classes: title: carbon/nitrogen ratio examples: - value: '0.417361111' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - carbon/nitrogen ratio rank: 44 @@ -43850,7 +43922,7 @@ classes: examples: - value: agar [CHEBI:2509];2018-05-11|agar [CHEBI:2509];2018-05-22 - value: agar [CHEBI:2509];2018-05 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chemical administration rank: 17 @@ -43881,7 +43953,7 @@ classes: title: chloride examples: - value: 5000 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chloride rank: 10 @@ -43910,7 +43982,7 @@ classes: title: chlorophyll examples: - value: 5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - chlorophyll rank: 11 @@ -43938,7 +44010,7 @@ classes: - value: '2021-04-15' - value: 2021-04 - value: '2021' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - collection date rank: 3 @@ -43969,7 +44041,7 @@ classes: title: conductivity examples: - value: 10 milliSiemens per centimeter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - conductivity rank: 222 @@ -43998,7 +44070,7 @@ classes: title: density examples: - value: 1000 kilogram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - density rank: 12 @@ -44026,7 +44098,7 @@ classes: examples: - value: 0 - 0.1 - value: '1' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - depth rank: 9 @@ -44057,7 +44129,7 @@ classes: title: diether lipids examples: - value: 0.2 nanogram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - diether lipids rank: 13 @@ -44087,7 +44159,7 @@ classes: title: dissolved carbon dioxide examples: - value: 5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved carbon dioxide rank: 14 @@ -44116,7 +44188,7 @@ classes: title: dissolved hydrogen examples: - value: 0.3 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved hydrogen rank: 15 @@ -44145,7 +44217,7 @@ classes: title: dissolved inorganic carbon examples: - value: 2059 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic carbon rank: 16 @@ -44174,7 +44246,7 @@ classes: title: dissolved inorganic nitrogen examples: - value: 761 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic nitrogen rank: 223 @@ -44203,7 +44275,7 @@ classes: title: dissolved inorganic phosphorus examples: - value: 56.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved inorganic phosphorus rank: 224 @@ -44232,7 +44304,7 @@ classes: title: dissolved organic carbon examples: - value: 197 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic carbon rank: 17 @@ -44261,7 +44333,7 @@ classes: title: dissolved organic nitrogen examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved organic nitrogen rank: 18 @@ -44290,7 +44362,7 @@ classes: title: dissolved oxygen examples: - value: 175 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - dissolved oxygen rank: 19 @@ -44319,7 +44391,7 @@ classes: title: downward PAR examples: - value: 28.71 microEinstein per square meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - downward PAR rank: 225 @@ -44337,7 +44409,7 @@ classes: description: An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path. comments: - The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 9 @@ -44355,7 +44427,7 @@ classes: description: Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path. comments: - The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 10 @@ -44373,7 +44445,7 @@ classes: description: Ecosystem subtypes represent further subdivision of Ecosystem types into more distinct subtypes. Ecosystem subtype is in position 4/5 in a GOLD path. comments: - Ecosystem Type Marine (Environmental -> Aquatic -> Marine) is further divided (for example) into Intertidal zone, Coastal, Pelagic, Intertidal zone etc. in the Ecosystem subtype category. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 12 @@ -44391,7 +44463,7 @@ classes: description: Ecosystem types represent things having common characteristics within the Ecosystem Category. These common characteristics based grouping is still broad but specific to the characteristics of a given environment. Ecosystem type is in position 3/5 in a GOLD path. comments: - The Aquatic ecosystem category (for example) may have ecosystem types like Marine or Thermal springs etc. Ecosystem category Air may have Indoor air or Outdoor air as different Ecosystem Types. In the case of Host-associated samples, ecosystem type can represent Respiratory system, Digestive system, Roots etc. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 11 @@ -44412,13 +44484,14 @@ classes: - All elevations must be reported in meters. Provide the numerical portion only. examples: - value: '100' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field slot_uri: MIXS:0000093 multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: float @@ -44426,7 +44499,7 @@ classes: name: env_broad_scale description: 'Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS' title: broad-scale environmental context - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 6 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -44443,7 +44516,7 @@ classes: name: env_local_scale description: 'Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.' title: local environmental context - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 7 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -44460,7 +44533,7 @@ classes: name: env_medium description: 'Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of ''environmental material'' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top).' title: environmental medium - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 8 is_a: environment field string_serialization: '{termLabel} {[termID]}' @@ -44481,7 +44554,7 @@ classes: - value: soil in_subset: - mixs extension - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - environmental package rank: 4 @@ -44503,7 +44576,7 @@ classes: title: experimental factor examples: - value: time series design [EFO:0001779] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - experimental factor rank: 12 @@ -44532,7 +44605,7 @@ classes: title: fluorescence examples: - value: 2.5 volts - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - fluorescence rank: 226 @@ -44555,7 +44628,7 @@ classes: title: geographic location (country and/or sea,region) examples: - value: 'USA: Maryland, Bethesda' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - geographic location (country and/or sea,region) rank: 4 @@ -44565,6 +44638,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -44585,7 +44659,7 @@ classes: title: glucosidase activity examples: - value: 5 mol per liter per hour - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - glucosidase activity rank: 20 @@ -44611,7 +44685,7 @@ classes: title: soil horizon method examples: - value: '' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soil horizon method rank: 19 @@ -44630,7 +44704,7 @@ classes: title: geographic location (latitude and longitude) notes: - required where? - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 is_a: environment field string_serialization: '{float} {float}' @@ -44638,6 +44712,7 @@ classes: multivalued: false owner: Biosample domain_of: + - FieldResearchSite - Biosample slot_group: mixs_modified_section range: string @@ -44658,7 +44733,7 @@ classes: title: light intensity examples: - value: 0.3 lux - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - light intensity rank: 227 @@ -44687,7 +44762,7 @@ classes: title: mean friction velocity examples: - value: 0.5 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean friction velocity rank: 22 @@ -44716,7 +44791,7 @@ classes: title: mean peak friction velocity examples: - value: 1 meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - mean peak friction velocity rank: 23 @@ -44742,7 +44817,7 @@ classes: title: miscellaneous parameter examples: - value: Bicarbonate ion concentration;2075 micromole per kilogram - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - miscellaneous parameter rank: 23 @@ -44772,7 +44847,7 @@ classes: title: n-alkanes examples: - value: n-hexadecane;100 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - n-alkanes rank: 25 @@ -44802,7 +44877,7 @@ classes: title: nitrate examples: - value: 65 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrate rank: 26 @@ -44831,7 +44906,7 @@ classes: title: nitrite examples: - value: 0.5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrite rank: 27 @@ -44860,7 +44935,7 @@ classes: title: nitrogen examples: - value: 4.2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - nitrogen rank: 28 @@ -44889,7 +44964,7 @@ classes: title: organic carbon examples: - value: 1.5 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic carbon rank: 29 @@ -44918,7 +44993,7 @@ classes: title: organic matter examples: - value: 1.75 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic matter rank: 45 @@ -44947,7 +45022,7 @@ classes: title: organic nitrogen examples: - value: 4 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organic nitrogen rank: 46 @@ -44976,7 +45051,7 @@ classes: title: organism count examples: - value: total prokaryotes;3.5e7 cells per milliliter;qPCR - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - organism count rank: 30 @@ -44993,7 +45068,7 @@ classes: name: oxy_stat_samp description: Oxygenation status of sample title: oxygenation status of sample - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 25 is_a: core field slot_uri: MIXS:0000753 @@ -45019,7 +45094,7 @@ classes: title: particulate organic carbon examples: - value: 1.92 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - particulate organic carbon rank: 31 @@ -45048,7 +45123,7 @@ classes: title: particulate organic nitrogen examples: - value: 0.3 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - particulate organic nitrogen rank: 228 @@ -45074,7 +45149,7 @@ classes: title: perturbation examples: - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - perturbation rank: 33 @@ -45103,7 +45178,7 @@ classes: title: petroleum hydrocarbon examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - petroleum hydrocarbon rank: 34 @@ -45129,7 +45204,7 @@ classes: title: pH examples: - value: '7.2' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pH rank: 27 @@ -45150,7 +45225,7 @@ classes: examples: - value: https://www.southernlabware.com/pc9500-benchtop-ph-conductivity-meter-kit-ph-accuracy-2000mv-ph-range-2-000-to-20-000.html?gclid=Cj0KCQiAwJWdBhCYARIsAJc4idCO5vtvbVMf545fcvdROFqa6zjzNSoywNx6K4k9Coo9cCc2pybtvGsaAiR0EALw_wcB - value: https://doi.org/10.2136/sssabookser5.3.c16 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 41 is_a: core field string_serialization: '{PMID}|{DOI}|{URL}' @@ -45177,7 +45252,7 @@ classes: title: phaeopigments examples: - value: 2.5 milligram per cubic meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phaeopigments rank: 35 @@ -45207,7 +45282,7 @@ classes: title: phosphate examples: - value: 0.7 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phosphate rank: 53 @@ -45236,7 +45311,7 @@ classes: title: phospholipid fatty acid examples: - value: 2.98 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - phospholipid fatty acid rank: 36 @@ -45266,7 +45341,7 @@ classes: title: photon flux examples: - value: 3.926 micromole photons per second per square meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - photon flux rank: 229 @@ -45295,7 +45370,7 @@ classes: title: potassium examples: - value: 463 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - potassium rank: 38 @@ -45324,7 +45399,7 @@ classes: title: pressure examples: - value: 50 atmosphere - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - pressure rank: 39 @@ -45353,7 +45428,7 @@ classes: title: primary production examples: - value: 100 milligram per cubic meter per day - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - primary production rank: 230 @@ -45382,7 +45457,7 @@ classes: title: redox potential examples: - value: 300 millivolt - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - redox potential rank: 40 @@ -45411,7 +45486,7 @@ classes: title: salinity examples: - value: 25 practical salinity unit - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - salinity rank: 54 @@ -45434,7 +45509,7 @@ classes: title: sample collection device examples: - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection device rank: 14 @@ -45457,7 +45532,7 @@ classes: title: sample collection method examples: - value: swabbing - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample collection method rank: 15 @@ -45481,7 +45556,7 @@ classes: examples: - value: filtering of seawater - value: storing samples in ethanol - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample material processing rank: 12 @@ -45507,7 +45582,7 @@ classes: title: amount or size of sample collected examples: - value: 5 liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - amount or size of sample collected rank: 18 @@ -45533,7 +45608,7 @@ classes: title: sample storage duration examples: - value: P1Y6M - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage duration rank: 353 @@ -45559,7 +45634,7 @@ classes: title: sample storage location examples: - value: Freezer no:5 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage location rank: 41 @@ -45588,7 +45663,7 @@ classes: title: sample storage temperature examples: - value: -80 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample storage temperature rank: 7 @@ -45611,7 +45686,7 @@ classes: - 'This field allows multiple entries separated by ; (Examples: Soil collected from the field will link with the soil used in an incubation. The soil a plant was grown in links to the plant sample. An original culture sample was transferred to a new vial and generated a new sample)' examples: - value: IGSN:DSJ0284 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 5 string_serialization: '{text}:{text}' multivalued: false @@ -45638,7 +45713,7 @@ classes: title: silicate examples: - value: 0.05 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - silicate rank: 43 @@ -45661,7 +45736,7 @@ classes: title: size fraction selected examples: - value: 0-0.22 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size fraction selected rank: 285 @@ -45690,7 +45765,7 @@ classes: title: size-fraction lower threshold examples: - value: 0.2 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size-fraction lower threshold rank: 10 @@ -45719,7 +45794,7 @@ classes: title: size-fraction upper threshold examples: - value: 20 micrometer - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - size-fraction upper threshold rank: 11 @@ -45748,7 +45823,7 @@ classes: title: sodium examples: - value: 10.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sodium rank: 363 @@ -45777,7 +45852,7 @@ classes: title: soluble reactive phosphorus examples: - value: 0.1 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - soluble reactive phosphorus rank: 231 @@ -45795,7 +45870,7 @@ classes: description: Specific ecosystems represent specific features of the environment like aphotic zone in an ocean or gastric mucosa within a host digestive system. Specific ecosystem is in position 5/5 in a GOLD path. comments: - Specific ecosystems help to define samples based on very specific characteristics of an environment under the five-level classification system. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - https://gold.jgi.doe.gov/help rank: 13 @@ -45824,7 +45899,7 @@ classes: title: sulfate examples: - value: 5 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfate rank: 44 @@ -45853,7 +45928,7 @@ classes: title: sulfide examples: - value: 2 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sulfide rank: 371 @@ -45882,7 +45957,7 @@ classes: title: suspended particulate matter examples: - value: 0.5 milligram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - suspended particulate matter rank: 232 @@ -45908,7 +45983,7 @@ classes: title: temperature examples: - value: 25 degree Celsius - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - temperature rank: 37 @@ -45934,7 +46009,7 @@ classes: title: tidal stage examples: - value: high tide - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - tidal stage rank: 45 @@ -45962,7 +46037,7 @@ classes: title: total depth of water column examples: - value: 500 meter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total depth of water column rank: 46 @@ -45991,7 +46066,7 @@ classes: title: total dissolved nitrogen examples: - value: 40 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total dissolved nitrogen rank: 233 @@ -46020,7 +46095,7 @@ classes: title: total inorganic nitrogen examples: - value: 40 microgram per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total inorganic nitrogen rank: 234 @@ -46049,7 +46124,7 @@ classes: title: total nitrogen concentration examples: - value: 50 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total nitrogen concentration rank: 377 @@ -46078,7 +46153,7 @@ classes: title: total particulate carbon examples: - value: 35 micromole per liter - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - total particulate carbon rank: 235 @@ -46107,7 +46182,7 @@ classes: title: turbidity examples: - value: 0.3 nephelometric turbidity units - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - turbidity rank: 47 @@ -46136,7 +46211,7 @@ classes: title: water current examples: - value: 10 cubic meter per second - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - water current rank: 236 @@ -46166,7 +46241,7 @@ classes: title: analysis/data type examples: - value: metagenomics; metabolomics; proteomics - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:investigation_type rank: 3 @@ -46190,7 +46265,7 @@ classes: - It can have any format, but we suggest that you make it concise, unique and consistent within your lab, and as informative as possible. examples: - value: Rock core CB1178(5-6) from NSW - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc aliases: - sample name rank: 1 @@ -46220,7 +46295,7 @@ classes: examples: - value: IGSN:AU1243 - value: UUID:24f1467a-40f4-11ed-b878-0242ac120002 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc rank: 2 is_a: nucleic acid sequence source field string_serialization: '{text}:{text}' @@ -46294,7 +46369,7 @@ classes: - Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable. examples: - value: 2021-04-15, 2021-04 and 2021 are all acceptable. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 2 @@ -46317,7 +46392,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 1 @@ -46340,7 +46415,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 3 @@ -46363,7 +46438,7 @@ classes: - Provided pairs will be considered for inclusion as future slots/terms in this data collection template. examples: - value: 'experimental treatment: value' - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:experimental_factor|additional_info rank: 7 @@ -46384,7 +46459,7 @@ classes: examples: - value: C18 - value: Basix PES, 13-100-106 FisherSci - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:filter_type rank: 6 @@ -46407,7 +46482,7 @@ classes: examples: - value: 13C glucose - value: H218O - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:chem_administration rank: 16 @@ -46431,7 +46506,7 @@ classes: examples: - value: https://doi.org/10.1016/0038-0717(87)90052-6 - value: https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:micro_biomass_meth rank: 1004 @@ -46452,7 +46527,7 @@ classes: examples: - value: https://doi.org/10.1016/0038-0717(87)90052-6 - value: https://doi.org/10.1016/0038-0717(87)90052-6 | https://www.sciencedirect.com/science/article/abs/pii/0038071787900526 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:micro_biomass_meth rank: 1004 @@ -46471,7 +46546,7 @@ classes: - If you provide this, correction factors used for conversion to the final units and method are required examples: - value: 0.05 ug C/g dry soil - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 1004 @@ -46491,7 +46566,7 @@ classes: - If you provide this, correction factors used for conversion to the final units and method are required examples: - value: 0.05 ug N/g dry soil - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 1004 @@ -46509,7 +46584,7 @@ classes: title: non-microbial biomass examples: - value: insect 0.23 ug; plant 1g - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:biomass|microbial_biomass rank: 8 @@ -46529,7 +46604,7 @@ classes: - required if "non-microbial biomass" is provided examples: - value: https://doi.org/10.1038/s41467-021-26181-3 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:microbial_biomass rank: 9 @@ -46548,7 +46623,7 @@ classes: - required if "org_nitro" is provided examples: - value: https://doi.org/10.1016/0038-0717(85)90144-0 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:org_nitro|tot_nitro_cont_meth rank: 14 @@ -46565,7 +46640,7 @@ classes: title: other treatments comments: - This is an open text field to provide any treatments that cannot be captured in the provided slots. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:additional_info rank: 15 @@ -46587,7 +46662,7 @@ classes: - Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable. examples: - value: 2021-04-15, 2021-04 and 2021 are all acceptable. - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 4 @@ -46610,7 +46685,7 @@ classes: - 'Time should be entered as HH:MM(:SS) in GMT. See here for a converter: https://www.worldtimebuddy.com/pst-to-gmt-converter' examples: - value: 13:33 or 13:33:55 - from_schema: https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/src/schema/nmdc + from_schema: https://w3id.org/nmdc/nmdc see_also: - MIxS:collection_date rank: 5